ID:

dsi_2534

 Coordinate:

x:4261112-4261261 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.6 -14.5 -14.4

Flybase annnotation

CDS [x_4261262_4261383_-]; exon [x_4261262_4261582_-]; intron [x_4259591_4261261_-]

Repeatable elements

NameClassFamilyStrand
(A)nSimple_repeatSimple_repeat+
mature
star
  1. 2l:19604189-19604212 -
  2. 3r:13625979-13626002 +
  3. x:2682578-2682601 -
  4. dsi_2534  x:4261117-4261140 -
  5. node_107411:155-178 +

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTCGAGTTGTCCACCACGCCCACATCTCTCGACCGCTTCATACCCTGCAGGTGAGTTGGTTTCCACAGATCACAATTATAGGATTTTCCACTTGCGACACGTTGATGGCTACTGTAACTTTGTTTGTTTGGGTGCATTGAACTCTGCACGAGCCGTTATTTTTTTTATTCTTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGGTACGTCATCTCTTCCGCTGGCGAGCAAAGAACG
**********************************************************************...(((((.(((((..................((((((((..((((........(((......)))........))))..))))))))........))))))))))...................******************************************************* 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
...............................ACCGCTTCATACCCTGCA......................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................CACAATTATAGGATTTTCCACTTGCGAC........................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................TGCCTGAGTCGTTATTTTTTTTATT................................................................................. 25 3 1 1.00 1 0 0 1 0 0 0 0 0
....................CACATCTCTCGACCGCTTCATACCC............................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0
...........................................................................................................................................................................TAGTTTTTTTTTTTTTTTTTTTTT....................................................... 24 0 5 0.20 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................TAGTTTTTTTTTTTTTTTTTTTTTT...................................................... 25 0 5 0.20 1 0 0 0 0 1 0 0 0
.........................................................................ACTTATAGGATTTTC.................................................................................................................................................................. 15 1 20 0.10 2 0 0 0 0 0 0 2 0
...........................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT........................................... 36 1 14 0.07 1 0 0 0 0 0 1 0 0
.............................................................................................................TACTGTACCGTTGTTTCTTT......................................................................................................................... 20 3 16 0.06 1 0 0 0 0 0 0 0 1
...............................................................................................................................................................................TTTTTTTTGTTTTTTTTTTTTGTTTTTTTTTTTTTT....................................... 36 2 20 0.05 1 0 0 0 0 0 1 0 0
................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTTTGTTTTTTTTTTTTTT...................................... 36 2 20 0.05 1 0 0 0 0 0 1 0 0

Anti-sense strand reads

AAGCTCAACAGGTGGTGCGGGTGTAGAGAGCTGGCGAAGTATGGGACGTCCACTCAACCAAAGGTGTCTAGTGTTAATATCCTAAAAGGTGAACGCTGTGCAACTACCGATGACATTGAAACAAACAAACCCACGTAACTTGAGACGTGCTCGGCAATAAAAAAAATAAGAATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATACCATGCAGTAGAGAAGGCGACCGCTCGTTTCTTGC
*******************************************************...(((((.(((((..................((((((((..((((........(((......)))........))))..))))))))........))))))))))...................********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM343915
embryo
 SRR902009
testis
 M053
female body
 M024
male body		 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR902008
ovaries
 M023
head
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
.................................................................................................................................................................................AAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA..................................... 36 1 20 22.80 456 456 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA........................................ 36 1 20 18.40 368 368 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT.................................... 36 0 13 10.54 137 137 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA....................................... 35 0 20 9.85 197 197 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA...................................... 35 0 20 9.85 197 197 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAA...................................... 36 1 20 7.95 159 159 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAA..................................... 36 1 20 7.95 159 159 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAA..................................... 36 1 20 7.50 150 150 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAA....................................... 36 1 20 6.70 134 134 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAA........................................... 20 0 20 6.70 134 0 0 134 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAA........................................ 36 1 20 6.70 134 134 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAA........................................ 36 1 20 6.30 126 126 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAA........................................ 36 1 20 5.20 104 104 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAA....................................... 36 1 20 5.20 104 104 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAA...................................... 36 1 20 5.20 104 104 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAA...................................... 36 1 20 4.65 93 93 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAA..................................... 36 1 20 4.65 93 93 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAA................................................ 24 0 20 4.60 92 0 92 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAA................................................. 24 0 20 4.60 92 0 92 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA................................... 36 0 7 4.00 28 28 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAA............................................... 25 0 20 3.55 71 0 0 71 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAA................................................ 25 0 20 3.55 71 0 0 71 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA........................................ 36 1 20 3.45 69 69 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA........................................ 36 1 20 3.00 60 60 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAA..................................... 36 1 20 2.90 58 58 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAA....................................... 36 1 20 2.85 57 57 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAA........................................ 36 1 20 2.85 57 57 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA..................................... 36 1 20 2.45 49 49 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAA...................................... 36 1 20 2.30 46 46 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAA..................................... 36 1 20 2.30 46 46 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAA....................................... 36 1 20 2.30 46 46 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAA............................................. 26 0 20 2.05 41 0 41 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAA............................................ 26 0 20 2.05 41 0 41 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAA...................................... 36 1 20 1.95 39 39 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAA....................................... 36 1 20 1.95 39 39 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAA........................................ 36 1 20 1.95 39 39 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.......................................... 35 0 13 1.92 25 25 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA....................................... 36 2 20 1.85 37 37 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA........................................ 36 2 20 1.85 37 37 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAA....................................... 24 0 20 1.80 36 0 0 0 0 0 0 36 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAA....................................... 36 1 20 1.60 32 32 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAA...................................... 36 1 20 1.60 32 32 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAA................................................. 27 0 20 1.55 31 0 26 0 0 0 0 0 5 0 0 0
..........................................................................................................................................................................AAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA............................................. 35 1 20 1.50 30 30 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAA................................................ 27 0 20 1.30 26 0 26 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AAGAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA............................................... 36 1 4 1.25 5 5 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAA..................................... 36 1 20 1.25 25 25 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAA......................................... 23 0 20 1.15 23 0 0 0 23 0 0 0 0 0 0 0
.........................................................................................................................................................................GAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA............................................. 36 1 7 1.14 8 8 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAA..................................... 23 0 20 1.05 21 0 0 0 0 0 21 0 0 0 0 0
.....................................................................................................................................................................ATAAGAATAAAAAAAAACCAAAAAAAAAAAAAAAAA................................................. 36 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................AGAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.............................................. 36 1 4 1.00 4 4 0 0 0 0 0 0 0 0 0 0
..............GTTCGGGTATAGAGAGCTG......................................................................................................................................................................................................................... 19 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................AAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA...................................... 35 1 20 1.00 20 20 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................AAAACAAGAACCAAACAAAAAAAAAAAAAAAAAAAA.................................................... 36 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA..................................... 35 1 20 1.00 20 20 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................AGACTCAAAGAAAAAAAAAAAAAAAAAAAAAAAAAA.............................................. 36 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................AAAAAAAAAAAAAAAAATACC................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................AACAACAATCAAAAACAAAAAAAAAAAAAAAAAAAA.................................................. 36 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................ACAATCAAATAATAAAAAAAAAAAAAAAAAAAAAAA.............................................. 36 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................AAAACAAAAAAAAAAATAATAAAAAAAAAAATACCA................................ 36 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................AAATAAGAATAAAAAAAAAAAAAAAAAAAAAAAAAA................................................... 36 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................AAACAATAAAAATCAAAAAAAAAAAAAAAAAAAAAA...................................................... 36 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GAATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA............................................. 36 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................TAGAGAGCTGCCGAAGGAAGGG............................................................................................................................................................................................................. 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAA........................................ 36 1 20 0.95 19 19 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAA......................................... 24 0 20 0.95 19 0 0 0 19 0 0 0 0 0 0 0
........................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAA........................................ 26 0 20 0.85 17 0 0 0 0 0 0 17 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAA..................................... 36 1 20 0.80 16 16 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAA....................................... 36 1 20 0.80 16 16 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAA...................................... 36 1 20 0.80 16 16 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAA......................................... 28 0 20 0.80 16 0 0 16 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAACAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAA..................................... 36 2 20 0.70 14 14 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAA....................................... 36 1 20 0.70 14 14 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAA..................................... 36 1 20 0.70 14 14 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAA...................................... 36 1 20 0.70 14 14 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAA........................................ 36 1 20 0.70 14 14 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAA............................................... 26 0 20 0.70 14 0 0 0 0 0 14 0 0 0 0 0
..................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAA.............................................. 26 0 20 0.70 14 0 0 0 0 0 14 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAA....................................... 36 1 20 0.70 14 14 0 0 0 0 0 0 0 0 0 0
......................GTAGAGAGCTGCCGAA.................................................................................................................................................................................................................... 16 1 6 0.67 4 0 0 0 0 0 0 0 0 0 1 3
...............................................................................................................................................................................AAAAAAAAAACACAAAAAAAAAAAAAAAAAAAAAAA....................................... 36 2 20 0.65 13 13 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAAACACAAAAAAAAAAAAAAAAAAAAAAA........................................ 36 2 20 0.65 13 13 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAACAAAAAAAAAAAAAAAAAAAACAAAAAAAAAA...................................... 36 2 20 0.60 12 12 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAACAAAAAAAAAAAAAAAAAAAACAAAAAAAAAA..................................... 36 2 20 0.60 12 12 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAA...................................... 27 0 20 0.60 12 0 0 0 12 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAA............................................... 29 0 20 0.60 12 0 3 9 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAATA................................... 36 1 7 0.57 4 4 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAA........................................... 21 0 20 0.55 11 0 0 0 0 0 0 0 11 0 0 0
..................................................................................................................................................................................AAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA..................................... 35 1 20 0.55 11 11 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATC................................... 36 1 20 0.55 11 11 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAA............................................. 27 0 20 0.55 11 0 0 0 0 0 11 0 0 0 0 0
......................................................................GTGTTAAGATCGTAAAAGATG............................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0
...............................................................................................................................................................................AAACAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAA....................................... 36 2 20 0.50 10 10 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................AAAAAAAAAAAAAAAAA................................................. 17 0 20 0.50 10 0 0 0 0 0 0 10 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAA..................................................... 20 0 20 0.50 10 0 0 0 10 0 0 0 0 0 0 0
........................AGAGAGCTGCCGAAGTA................................................................................................................................................................................................................. 17 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................CAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.......................................... 35 1 14 0.50 7 7 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................ACAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.............................................. 36 2 10 0.50 5 5 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GAATCCAAAACAAAAAAAAAAAAAAAAAAAAAAAAA............................................. 36 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................AGAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.............................................. 36 1 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAACAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAA...................................... 36 2 20 0.50 10 10 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AAGAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAA................................................ 35 1 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................AAAAAAAAATAAAAAAAATATCAAGCAGT.......................... 29 3 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0
..................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAA.................................................... 20 0 20 0.50 10 0 0 0 10 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAA.............................................. 29 0 20 0.45 9 0 0 9 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAA....................................... 36 1 20 0.45 9 9 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAA...................................... 36 1 20 0.45 9 9 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAA..................................... 36 1 20 0.45 9 9 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAA....................................... 36 1 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................AAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.............................................. 36 2 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA..................................... 36 2 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................AAAATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.............................................. 36 1 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAACAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAA...................................... 36 2 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAACAAAAAAAAAAAAAAACAAAAAAAAAAAAAAA........................................ 36 2 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAA........................................ 36 1 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAACAAAAAAAACAAAAAAAAAAAAAAAAAAAAAA..................................... 36 2 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAACAAAAAAAAAAAAAAACAAAAAAAAAAAAAAA...................................... 36 2 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAACAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAA....................................... 36 2 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAA........................................... 28 0 20 0.40 8 2 6 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA...................................... 36 2 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AAACAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAA............................................ 36 2 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAACAAAAAAAACAAAAAAAAAAAAAAAAAAAAAA...................................... 36 2 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAACAAAAAAAAAAAAAAACAAAAAAAAAAAAAAA....................................... 36 2 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAA...................................... 26 0 20 0.40 8 0 0 0 0 0 0 0 8 0 0 0
.......................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTAT............................... 36 2 8 0.38 3 3 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAACAAAAACAAAAAAAAAAAAAAAAAAAAAA..................................... 36 2 20 0.35 7 7 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAAAAAAAAACAAAAAAAAAAAAAAACAAAA...................................... 36 2 20 0.35 7 7 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAACAAAAAACAAAAAAAAAAAAAAAAAAAAAAAA........................................ 36 2 20 0.35 7 7 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................AAAAAAAAAAAAAAAAAAA.................................................. 19 0 20 0.35 7 0 0 0 7 0 0 0 0 0 0 0
..............................................................................................................................................................................AAACAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAA........................................ 36 2 20 0.35 7 7 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAACAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAA........................................ 36 2 20 0.35 7 7 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAAAAAACAAAAAAAAAAAAAAACAAAA....................................... 36 2 20 0.35 7 7 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................ATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.............................................. 33 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................AGAAACAAAAACAAAAAAAAAAAAAAAAAAAAAAAA.............................................. 36 2 6 0.33 2 2 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................AAAACAAAAATCAAAAAAAAAAAAAAAAAAAAAAAA.................................................... 36 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AAGCAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA............................................... 36 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AAAAAAAAAAATAATCAAAAAAAAAAAAAAAAAAAA........................................................ 36 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
............TTGTGCGGCTATAGAGAGCTG......................................................................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
...................GCTATAGAGAGCTGGCGAACT.................................................................................................................................................................................................................. 21 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................AAACAAAAATCACAAAAAAAAAAAAAAAAAAAAAAA................................................... 36 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAAAAAACAACAAAAAAAAAAAAAAA..................................... 36 2 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAACAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAA........................................ 36 2 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAACAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAA...................................... 36 2 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAAAAAAAAAAACAACAAAAAAAAAAAAAAA...................................... 36 2 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAACAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAA..................................... 36 2 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAAAACACAAAAAAAAAAAAAAAAAAAAAA........................................ 36 2 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AAACAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAA............................................ 36 2 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AAACAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAA............................................ 36 2 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAAAAAAAAAAAAACAAAAACAAAAAAAAAA...................................... 36 2 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAACACAAAAAAAAAAAAAAAAAAAAAA....................................... 36 2 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AAACAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAA............................................ 36 2 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAAAAAAAACAAAAACAAAAAAAAAA..................................... 36 2 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTA................................... 36 1 17 0.29 5 5 0 0 0 0 0 0 0 0 0 0
.........................GAGAGCTGCCGAAGT.................................................................................................................................................................................................................. 15 1 7 0.29 2 0 0 0 0 1 0 0 0 0 1 0
...................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAATA................................... 36 1 7 0.29 2 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAATA................................... 36 2 7 0.29 2 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAATA................................... 36 1 7 0.29 2 2 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAACAAAAACAAAAAAAAAAAAAAAAAAAAAAA..................................... 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA............................................... 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAACAAAAAAAAAAAAAAAAAAAACAAAAAAAAA..................................... 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AAACAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAA............................................ 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
...................GCTATAGAGAGCTGGCGAGGT.................................................................................................................................................................................................................. 21 3 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAA........................................ 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAACACAAAAAAAAAAAA...................................... 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAACAAAAAAACAAAAAAAAAAAAAAAAAAAAAA....................................... 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAACACAAAAAAAAAAAA..................................... 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AACACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA................................................ 35 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAACAAAAACAAAAAAAAAAAAAAAAAAAA..................................... 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAAACAAAAACAAAAAAAAAAAAAAAAAAAA...................................... 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................AGAAACAAAAAAAAAAAAAAAAAAAAAACAAAAAAA.............................................. 36 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAACAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAA........................................ 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAA....................................... 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAACAAAAACAAAAAAAAAAAAAAAAAAAAAAAAA..................................... 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAACAAAACAAAAAAAAAAAAAAAAAAAAAAA........................................ 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAACAAAACAAAAAAAAAAAAAAAAAAAAAAA....................................... 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAACAAAAAAACAAAAAAAAAAAAAAAAAAAAAA........................................ 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAA....................................... 28 0 20 0.25 5 0 0 0 0 0 5 0 0 0 0 0
........................................................................................................................................................................AGAAACAAAAAAAAACAAAGAAAAAAAAAAAAAAAA.............................................. 36 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAACAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAA..................................... 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
....................TTGTCGAGAGCTGGCCAAGT.................................................................................................................................................................................................................. 20 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................ATAAGACTACAAAAAAAAAAAAAAAAAAAAAAAAAA................................................. 36 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA..................................... 35 1 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA........................................ 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAACAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAA...................................... 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAACACAAAAAAAAAAAA....................................... 36 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAT.................................... 36 1 13 0.23 3 3 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT.................................... 36 1 13 0.23 3 3 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.......................................... 35 1 14 0.21 3 3 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT.................................... 36 1 19 0.21 4 4 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AAGAAACAAAAAGAAAAAAAAAAAAAAAAAAAAAA................................................ 35 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAACAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAA....................................... 36 2 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAACAAACAAAA...................................... 36 2 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAACAAAAAAAAAAAAAAAAAACAAAAAAAAAAAA....................................... 36 2 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAACAAACAAAAAAAAAAAAAAAAAAAAAA..................................... 36 2 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
......................ATAGAGAGCTGGCAAAGT.................................................................................................................................................................................................................. 18 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAAACACACAAAAAAAAAAAAAAAAAAA....................................... 36 3 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAACAAAAAAAAAAAAAAAAAACAAAAAAAAAAAA........................................ 36 2 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAA..................................... 35 1 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AATCACAAAAAAAAAAAAAAAAAAAAAAAAAA................................................ 32 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AAGAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA............................................... 36 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAACAAAAAAAAAAAAAACAAAAAAAAAAAAAAAA..................................... 36 2 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................ACCATGCAGTAGAGC..................... 15 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................................AAAAAAAAAAAACACACAAAAAAAAAAAAAAAAAAA...................................... 36 3 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................AGAAACAAAAAAAAAAAAAAAACAAAAAAAAAAAA............................................... 35 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAACAAAAAAAAAAAAAACAAAAAAAAAAAAAAAA...................................... 36 2 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................AAAATAACAAACAAAAAAAGAAAAAAAAAAAAAAAA.................................................... 36 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAACACAAAAAAAA........................................ 36 2 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAACAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAA........................................ 36 2 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAA...................................... 35 1 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................AAAAAAAAAAAAAACAAAAAAAAAAAACAAATATAC.................................. 36 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAACAAACAAAA....................................... 36 2 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AAAAAAAAATTACCAAGCAGT.......................... 21 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................................................................AAAACAAAAAAAAAAAAAAAAAAACAAAAAAAAAAA..................................... 36 2 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................AGACTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.............................................. 36 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAAAAACACACAAAAAAAAAAAAAAAAAAA........................................ 36 3 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................AAAATCAAAAAAAAACAAAAAAAAAAAAAAAAAAAA.............................................. 36 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATA................................... 36 1 10 0.20 2 2 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAACAAAAAAAAAAAAAAAAAAACAAAAAAAAAAA...................................... 36 2 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAT.................................... 36 1 16 0.19 3 3 0 0 0 0 0 0 0 0 0 0
............TCGTGAGGGTGTAGAGA............................................................................................................................................................................................................................. 17 2 11 0.18 2 0 0 0 0 1 0 0 0 1 0 0
....................................................................................................................................................................AATAATAAACAAAAAAAAAAAAAAAAAAAAAAAAAA.................................................. 36 2 11 0.18 2 2 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AAAAAAAAAAAAAATACC................................. 18 0 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1
........................................................................................................................................................................AAAATCAAAAAAAACAAAAAAAAAAAAAAAAAAAAA.............................................. 36 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................AAACAATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA................................................ 36 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................AGAAACAACAAAAAAAAAAAAAAAAAAAAAAAAAAA.............................................. 36 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................AGAACCATAAAATAAAAAAAAAAAAAAAAAAAAAAA.............................................. 36 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAT.................................... 36 1 18 0.17 3 3 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AAGATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA............................................... 36 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA............................................. 36 1 13 0.15 2 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAA.......................................... 35 1 13 0.15 2 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.......................................... 35 1 13 0.15 2 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAA.......................................... 35 1 13 0.15 2 2 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAACAAAAAAAAACAAAAAAAAAAAAAAA..................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAACAAAAAAAAAACAAAAAAAAAAAAAAAAAAAA...................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAAAACAAAAAACAAAAAAAAAAAAA..................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAAAAAAAAAAAACAAAAAAACAAAAAAAA........................................ 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAACAAAAAAAAAAAAAAACAAAAAAAAAA....................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAA..................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAACAAAAAAAAAAAAAAAAAAAAAACAAAA....................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAAAACAAAAAAACAAAAAAAAAAAAAAAA........................................ 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAAAAAAAAAAAACAACAAAAAAAAAAAAAA...................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAAAACAAAAAAAAACAAAAAAAAAAAAAAA...................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAACAAAAAAAAAACAAAAAAAAAAAAAAAAAAAA..................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAACCACAAAAAAAAAA....................................... 36 3 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAACAAAAAACAAAAAAAAAAAAAAAAAAAAAA....................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAAACAAAAAAAAAAAACAAAAAAAAAAAAA...................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAAAAAAAAACAAAAAACAAAAAAAAAAAAA...................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAATA................................... 24 0 20 0.15 3 0 0 2 1 0 0 0 0 0 0 0
................................................................................................................................................................................AAAACAAAAAAAAAAACAAAAAAAAAAAAAAAAAAA...................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAAAAAAACAAAAAAAAAACAAAAAAAA....................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAACCACAAAAAAAAAA........................................ 36 3 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AAACAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAA............................................ 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAACAAAAAAACAAAAAAAAAAAAAAAA....................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAAAAAAAACAACAAAAAAAAAAAAAA..................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAACAAAAAAAAAAAAAAAAAAAAACAAAA..................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA..................................... 33 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAAAAAAAAACAAAAAAAAAACAAAAAAAA........................................ 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAA......................................... 22 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAAAAAAAAAAACACAAAAAAAAAAAAAAA........................................ 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAACAAAAAACAAAAAAAAAAAAAAAAAAAAAA...................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AAACAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAA............................................ 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAA........................................... 29 0 20 0.15 3 0 0 0 0 0 3 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAACAAAAAAAAAAAAAAAAAAAAAACAAAA........................................ 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAAAAAAAAAAACAAAAAAACAAAAAAAA....................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAACAAAAAAAAAAAACAAAAAAAAAAAAA..................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAAAAAAAACAAAAAAAAAACAAAAAAAAAAAA..................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAACAAAAAAAAAAAAAAACAAAAAAAAAA........................................ 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AAAAAAAACAAAAAAAAAAAAAAAAAAAAAACAAAA...................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAACAAAAAAAAAAACAAAAAAAAAAAAAAAAAAA....................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAAAAAAAAACAAAAAAAAACAAAAAAAAAAAAAAA....................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAACAAAAAACAAAAAAAAAAAAAAAAAAAAAA..................................... 36 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................AAAAAAACAATCACAAAAAAAAAAAAAAAAAAAAAA.................................................... 36 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AACAAGCAAAAGAAAAAAAAAAAAAAAAAAAAAAAA............................................... 36 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAT.................................... 36 1 14 0.14 2 2 0 0 0 0 0 0 0 0 0 0
......................GTAGAGAGCTGCCGA..................................................................................................................................................................................................................... 15 1 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................AAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAATA................................... 36 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAT.................................... 36 1 14 0.14 2 2 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAC.................................. 36 1 14 0.14 2 2 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT.................................... 36 1 14 0.14 2 2 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................AGAACCACAAAAGAAAAAAAAAAAAAAAAAAAAAA............................................... 35 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAAAAAAAAAACAAAAAAAAACAAAAAAAAACAATA................................... 36 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAATA................................... 36 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAATA................................... 36 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAA.......................................... 35 1 14 0.14 2 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAAAAAAAAAAAAACAAAAAAAGAAGAAAAAAAATA................................... 36 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT.................................... 36 1 15 0.13 2 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CAACAAAAAAACAAAAAAAAAAAAAAAAAAAAAAA.......................................... 35 2 15 0.13 2 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................ATAACAATAAAAAAAAAAAAAAAAAAAAAAAAAAAA................................................. 36 2 15 0.13 2 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA................................... 36 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAATGGCAT............................... 31 2 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................GAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.............................................. 35 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................CATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA............................................. 35 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AAGAATAAACAGAAAAAAAAAAAAAAAAAAAAAAAA............................................... 36 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAATA................................... 36 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................AGACTGAAAACAAAAAAAAAAAAAAAAAAAAAAAA............................................... 35 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................AATAAAAATTAAAAAAAAAAAAAAAAAAAAAAAAAA.................................................. 36 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TAATCAGAAAAATAAAAAAAAAAAAAAAAAAAAAAA............................................. 36 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATA................................... 36 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AAAAAAAATAATAATAAAAAAAAAAAAAAAAAAAAA........................................................ 36 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA............................................... 34 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:4261062-4261311 - dsi_2534 TTCGAGTTGTCCACCACGCCCACATCTCTCGACCGCTTCATACCCTGCAGGTGAGTTG---------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------TTTCCACAGATCACAATTAT----------------AGG-------------------------------------------------------------------ATTTT-------------------------------CCACTTGCGACACGTTGATG------GCT-ACT--------GTAACTTTGTTTGTTTGGGTGCATT----------------------------------------------------------------------------------------GAACTCTGC--ACGAGCCGTTATTTT-----------------------TTTTATTCTTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGGTACGTCATCTCTTCCGCT--------------------------------GGCG--AG-CAAAGAACG
droSec2 scaffold_4:2159361-2159593 + TACGAGTTGTCCACCACGCCCACATCTCTCGACCGCTTCATACCCTGCAGGTGAGTTG---------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------TTTCCACAGATCACAATGAT----------------AGG-------------------------------------------------------------------ATTTT-------------------------------CCACTTGCGACACGTTGATG------GCT-TCTGTAACTTTGTAACTTTGTTTGTTTGGGTGCATT----------------------------------------------------------------------------------------GAACTCTGC--ACGAGCCGTTATTTT-----------------------TTTTATTCT-----------------------TATTTTTTTTTTTTT--TTTTGCTACGTCATCTCTTCCGCT--------------------------------GGCG--AG-CAAAGAACG
dm3 chrX:4570135-4570336 - TTCGAGTCGTCCACTACGCCCACATCTCTCGACCGCTTCATACCCTGCAGGTGAGTTG---------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------TTACCAAATTT----------------TCAAATGATAGA------------------------------------------------------------------------------------------------------------------------ATG------GTT-TCTGTAACTTTGTAACTT----TGTTTGGGTGCATT----------------------------------------------------------------------------------------GAACTCTGC--ACGAGCCGTTATTTT-----------------------TT------------------------------TATTTTTTTTTATTT--TTTTGCTACGTCATCTCTTCCGCT--------------------------------GGCGAAAG-CAAAGAACG
droEre2 scaffold_4690:1947509-1947717 - ATCGAGGCCTCCACCACGCCCACATCTCTCGACCGCTTCATACCCTGCAGGTGAGTTG---------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------CTTCCACAGTTTG--GTT---------TCAC-----ATG-------------------------------------------------------------------GCATT-------------------------------CCACTTGCTGCAAGAGGATTGCTTTGCC-CACTGCGGTTTTGTAACTT----CATTTGAGTGCATT----------------------------------------------------------------------------------------GAACTCTGC--ACGAGCCGTTATTCT------------------------------------------------------------------------ATTTGCTACGTCATCTTTTCCGCTTACAAG-GCA--------------AAAG----------------------
droYak3 X:3870652-3870993 + dya_1320 TTTGAGGCGTCCACCACGCCCACATCTCTCGACCGCTTCATACCCTGCAGGTGAGTTGCT-------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------TTGCCACAGGTGACACA--GATGATTTTCCAATTGATTATGATGATTTTTCACTTGTTGCTAGTTGATTGTGATTATTTTCCACTTGCTGCAAGTTGATTATCGTGATTTTCCACTTGCTGCAAGTTGATTATGATGATTTTCCACGTGCTGCTAGTTGATTGCTCTGCC-CAGCGCTGTGTTGTAAATC----TATTTGAGTGCATT----------------------------------------------------------------------------------------GAACTCTGC--ACGAGCCGTTATTCT------------------------------------------------------------------------TTTTGCTACGTCATCTTTGCCGCTTAGAAG-GCA--------------ACAAAACTGGCG--AG-CGGAGAACC
droEug1 scf7180000409548:344996-345057 - ATCGAATCGTCCACCACACCCACATCACTCGACCGCTTCATACCCTGCAGGTGAGTTT---------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------GTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301703:127999-128060 + CTCGAGTCGTCCACCACGCCCACATCACTCGACCGCTTCATACCCTGCAGGTGGGTTG---------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000414746:53167-53251 - CTCGAGTCGTCAACCACGCCCACATCACTCGATCGCTTCATACCCTGCAGGTGAGTTG---------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------GTTTTGGGGTTTA--TTTAT----------------AAA-------------------------------------------------------------------ATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491011:1738584-1738689 + TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTAATTT----ATTTTGAGTGCATT----------------------------------------------------------------------------------------GAACTCTGC--ACAAGCCGTTATTCT------------------------------------------------------------------------TTCAGCTACGTCATCTCTTCCGCTTTCAAG-GCG--------------AAAGAACTGGCG--AAAAAGAATAAA
droRho1 scf7180000778083:133732-133857 - ACGTTGTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTAAGTGATGTTTTGTAATTT----ATTTTGAGTGCATT----------------------------------------------------------------------------------------GAACTCCAC--ACAAGCCGTTATTCT------------------------------------------------------------------------TTTAGCTACGTCATCTCTTCCGCTTTCAAG-GCG--------------AAAGAACTGGCG--AAAAAGAATAAA
droFic1 scf7180000453775:118278-118619 + CTCGAGTCATCGACCACGCCCACATCCCTCGATCGTTTTATACCCTGCAGGTGAGTTTTATTACTATTAAACCGTATTTATTTATTTAAATAATGCAAGCTTTGATCCATTTTACATTGTTAATCTACGAGGGATTTATTTTGTAATTGTATCTGATCATTAGGGCTTGAATAAATTTGTTTTTATTATTTAGACTCTTG--------------------------------TATCCATGGGTTACAA------------------------------------------------------------------------------------------------------------------------------------------CCTTAATTGCT-TGCC-TGGTTATATTTTGTAATTT----TAATTGAGTGCATT----------------------------------------------------------------------------------------GAACTCTGC--ACAAGCCGTTATTCC------------------------------------------------------------------------TTCTGCTACGTCATCTTTTCCGCTTACAAG-GCG--------------AAAGAGCTGGCG--A---AGAGAACA
droKik1 scf7180000302300:105753-105917 - TTAGAATCTTCCACCACGCCCACATCCCTGGATCGCTTTATACCTTGCAGGTGAGTTT---------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------TTA----------------AAGGATTTTTAAAGAAATTA------------------------------------------------------------------------------------------------------------------------AGG------G-------------------AT----ATTATGATTGTATT----------------------------------------------------------------------------------------TAAATATGT--CCAAGGCTTTATTTCTATAAAAAAAAGTTTATGTGATTTTTTATTAT-----------------------TATTTTT------------------------------------------------------------------------------------
droAna3 scaffold_13117:4312517-4312688 - CTCGAGTCCTCCACAACACCCACATCGCTGGATCGTTTCATTCCATGCCGGTGAGTTT---------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------ATA-----TTTTA--TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAA------------------------------------------------------------------------------------------TTATTTTGTAAAGTTTATTGAACTTTACATACAAGCCGTTATT------------------------------------------------------------------------------GCTACGTCATCTTTTCCGCTTTCAAT-GAA--C-----------AAAAAAAAGCAG--AAAAACAGAAAA
droBip1 scf7180000396383:92596-92733 + CTCGAGTCCTCCACCACGCCCACATCGCTGGACAGGTTCATTCCCTGCAGGTGAGACT---------------------------------------------------------------------------------------------------------------------------------------------C--------------------------------TTT---AATTTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAAAAACAAATT---------------------AACAATCTTGTTTAGTTTTCCTGCAAAGTTTGTTGAACTC--C--ACGAGCCGTTAT-----------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XL_group1e:11906737-11906792 + TTGGAATCGTCGACCACACCGACATCGCTGGATCGTTTCATACCATGCAGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_14:1705849-1705904 - TTGGAATCGTCGACCACACCGACATCGCTGGATCGTTTCATACCATGCAGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004909:7407294-7407540 - TTGGAATCATCAACGACACCAACATCATTGGATCGCTTTATACCATGCAGGTGAGTTACA-------------------------------------------------------------------------------------------------------------------------------------------CATACACACACACACATACATACACAGGGCCATTGA----------------AA-------------------------------------------------------------------------------------------------------------------------------------------GG------GC------------------------CACTAAAGCACATTGAACTCGTCCAAGTCCAACTCCAACTCCAACCTGGGGGCTTCAGCTAAAGCCGCCGTTATTTTGTTTTG------------------------------------------TTT------------------------------------------------------------------------TTCTGCTACATCATCTTTTCCGCTTTCGAGCGTGTGTGTATGTGTGCAGC---------------AAAAGAACA
droVir3 scaffold_9427:48-140 + ATTTTTTTTTTTTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT--------TTTTTTTTCTTCTTTTCT-CCCCT--------------------------------CTCT--GG-AACAGAACG
droMoj3 scaffold_6473:2837379-2837434 + CTGGAAGCGTCCACAACGCCAACATCGTTGGATCGTTTCATACCCTGCAGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15081:1302606-1302678 - CAAGCTGTTGTTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTTTGTTTCTTATTTCTTATTTTTTTTTTTTTTTTTTGTT--TTT---------------------TAC-----------------------------------------AGTGCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTCGAGTTGTCCACCACGCCCACATCTCTCGACCGCTTCATACCCTGCAGGTGAGTTG---------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------TTTCCACAGATCACAATTAT----------------AGG-------------------------------------------------------------------ATTTT-------------------------------CCACTTGCGACACGTTGATG------GCT-ACT--------GTAACTTTGTTTGTTTGGGTGCATT----------------------------------------------------------------------------------------GAACTCTGC--ACGAGCCGTTATTTT-----------------------TTTTATTCTTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGGTACGTCATCTCTTCCGCT--------------------------------GGCG--AG-CAAAGAACGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................ACCGCTTCATACCCTGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
...................................................................................................................................................................................................................................................CACAATTAT----------------AGG-------------------------------------------------------------------ATTTT-------------------------------CCACTTGCGAC...........................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
....................CACATCTCTCGACCGCTTCATACCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTTTTTTTTTTTTTTTTTTTT..........................................................................................2450.20100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTTTTTTTTTTTTTTTTTTTTT.........................................................................................2550.20100000000010000000
droSec2
TACGAGTTGTCCACCACGCCCACATCTCTCGACCGCTTCATACCCTGCAGGTGAGTTG---------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------TTTCCACAGATCACAATGAT----------------AGG-------------------------------------------------------------------ATTTT-------------------------------CCACTTGCGACACGTTGATG------GCT-TCTGTAACTTTGTAACTTTGTTTGTTTGGGTGCATT----------------------------------------------------------------------------------------GAACTCTGC--ACGAGCCGTTATTTT-----------------------TTTTATTCT-----------------------TATTTTTTTTTTTTT--TTTTGCTACGTCATCTCTTCCGCT--------------------------------GGCG--AG-CAAAGAACGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
TTCGAGTCGTCCACTACGCCCACATCTCTCGACCGCTTCATACCCTGCAGGTGAGTTG---------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------TTACCAAATTT----------------TCAAATGATAGA------------------------------------------------------------------------------------------------------------------------ATG------GTT-TCTGTAACTTTGTAACTT----TGTTTGGGTGCATT----------------------------------------------------------------------------------------GAACTCTGC--ACGAGCCGTTATTTT-----------------------TT------------------------------TATTTTTTTTTATTT--TTTTGCTACGTCATCTCTTCCGCT--------------------------------GGCGAAAG-CAAAGAACGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............CTACGCCCACATCTCTCGACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACTACGCCCACATCTCTCGACCGCTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TCGAGTCGTCCACTACGCCCACATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CCACATCTCTCGACCGCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTCATCTCTTCCGCT--------------------------------GGC...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TACGCCCACATCTCTCGACCGCTTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...........CACTACGCCCACATCTCTCGACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CACATCTCTCGACCGCTTCATACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TCGAGTCGTCCACTACGCCCACAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ACATCTCTCGACCGCTTCATACCCTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TT----TGTTTGGGTGCATT----------------------------------------------------------------------------------------GAACT.......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................ACCGCTTCATACCCTGCAGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----------------------TT------------------------------TATTTTTTTTTATTT--TTTT......................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTATTTT-----------------------TT------------------------------TATTTTTTTT.................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTT-----------------------TT------------------------------TATTTTTTTTTATTT--..........................................................................2190.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTT-----------------------TT------------------------------TATTTTTTTTTAA..............................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
droEre2
ATCGAGGCCTCCACCACGCCCACATCTCTCGACCGCTTCATACCCTGCAGGTGAGTTG---------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------CTTCCACAGTTTG--GTT---------TCAC-----ATG-------------------------------------------------------------------GCATT-------------------------------CCACTTGCTGCAAGAGGATTGCTTTGCC-CACTGCGGTTTTGTAACTT----CATTTGAGTGCATT----------------------------------------------------------------------------------------GAACTCTGC--ACGAGCCGTTATTCT------------------------------------------------------------------------ATTTGCTACGTCATCTTTTCCGCTTACAAG-GCA--------------AAAG----------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........TCCACCACGCCCACATCTCTCGACCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
droYak3
TTTGAGGCGTCCACCACGCCCACATCTCTCGACCGCTTCATACCCTGCAGGTGAGTTGCT-------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------TTGCCACAGGTGACACA--GATGATTTTCCAATTGATTATGATGATTTTTCACTTGTTGCTAGTTGATTGTGATTATTTTCCACTTGCTGCAAGTTGATTATCGTGATTTTCCACTTGCTGCAAGTTGATTATGATGATTTTCCACGTGCTGCTAGTTGATTGCTCTGCC-CAGCGCTGTGTTGTAAATC----TATTTGAGTGCATT----------------------------------------------------------------------------------------GAACTCTGC--ACGAGCCGTTATTCT------------------------------------------------------------------------TTTTGCTACGTCATCTTTGCCGCTTAGAAG-GCA--------------ACAAAACTGGCG--AG-CGGAGAACCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................TTTTCCACTTGCTGCAAGTTG...................................................................................................................................................................................................................................................................................................................................................................................2122.00403100000000
...................................................................................................................................................................................................................................................................................................................................................TTTTCCACTTGCTGCAAGTTG....................................................................................................................................................................................................................................................................................................................................................2122.00403100000000
........................................................................................................................................................................................................................................................................................................................................................CACTTGCTGCAAGTTGATTATG..............................................................................................................................................................................................................................................................................................................................................2211.00100100000000
...................................................................................................................................................................................................................................................................................................................................................TTTTCCACTTGCTGCAAGTTGA...................................................................................................................................................................................................................................................................................................................................................2221.00200200000000
....................................................................................................................................................................................................................................................................................................................TTTTCCACTTGCTGCAAGTTGA..................................................................................................................................................................................................................................................................................................................................................................................2221.00200200000000
....................................................................................................................................................................................................................................................................................................................TTTTCCACTTGCTGCAAGTTGAA.................................................................................................................................................................................................................................................................................................................................................................................2320.50101000000000
...................................................................................................................................................................................................................................................................................................................................................TTTTCCACTTGCTGCAAGTTGAA..................................................................................................................................................................................................................................................................................................................................................2320.50101000000000
..................................................................................................................................................................................................................................................................................................................................................ATTTTCCACTTGCTGCAAGTT.....................................................................................................................................................................................................................................................................................................................................................2120.50100001000000
...................................................................................................................................................................................................................................................................................................................ATTTTCCACTTGCTGCAAGTT....................................................................................................................................................................................................................................................................................................................................................................................2120.50100001000000
...................................................................................................................................................................................................................................................................................................................ATTTTCCACTTGCTGCAAGTC....................................................................................................................................................................................................................................................................................................................................................................................2130.33100100000000
..................................................................................................................................................................................................................................................................................................................................................ATTTTCCACTTGCTGCAAGTC.....................................................................................................................................................................................................................................................................................................................................................2130.33100100000000
droEug1
ATCGAATCGTCCACCACACCCACATCACTCGACCGCTTCATACCCTGCAGGTGAGTTT---------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------GTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CTCGAGTCGTCCACCACGCCCACATCACTCGACCGCTTCATACCCTGCAGGTGGGTTG---------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CTCGAGTCGTCAACCACGCCCACATCACTCGATCGCTTCATACCCTGCAGGTGAGTTG---------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------GTTTTGGGGTTTA--TTTAT----------------AAA-------------------------------------------------------------------ATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTAATTT----ATTTTGAGTGCATT----------------------------------------------------------------------------------------GAACTCTGC--ACAAGCCGTTATTCT------------------------------------------------------------------------TTCAGCTACGTCATCTCTTCCGCTTTCAAG-GCG--------------AAAGAACTGGCG--AAAAAGAATAAASizeHit CountTotal NormTotal
No Reads
droRho1
ACGTTGTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTAAGTGATGTTTTGTAATTT----ATTTTGAGTGCATT----------------------------------------------------------------------------------------GAACTCCAC--ACAAGCCGTTATTCT------------------------------------------------------------------------TTTAGCTACGTCATCTCTTCCGCTTTCAAG-GCG--------------AAAGAACTGGCG--AAAAAGAATAAASizeHit CountTotal NormTotal
No Reads
droFic1
CTCGAGTCATCGACCACGCCCACATCCCTCGATCGTTTTATACCCTGCAGGTGAGTTTTATTACTATTAAACCGTATTTATTTATTTAAATAATGCAAGCTTTGATCCATTTTACATTGTTAATCTACGAGGGATTTATTTTGTAATTGTATCTGATCATTAGGGCTTGAATAAATTTGTTTTTATTATTTAGACTCTTG--------------------------------TATCCATGGGTTACAA------------------------------------------------------------------------------------------------------------------------------------------CCTTAATTGCT-TGCC-TGGTTATATTTTGTAATTT----TAATTGAGTGCATT----------------------------------------------------------------------------------------GAACTCTGC--ACAAGCCGTTATTCC------------------------------------------------------------------------TTCTGCTACGTCATCTTTTCCGCTTACAAG-GCG--------------AAAGAGCTGGCG--A---AGAGAACASizeHit CountTotal NormTotal
No Reads
droKik1
TTAGAATCTTCCACCACGCCCACATCCCTGGATCGCTTTATACCTTGCAGGTGAGTTT---------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------TTA----------------AAGGATTTTTAAAGAAATTA------------------------------------------------------------------------------------------------------------------------AGG------G-------------------AT----ATTATGATTGTATT----------------------------------------------------------------------------------------TAAATATGT--CCAAGGCTTTATTTCTATAAAAAAAAGTTTATGTGATTTTTTATTAT-----------------------TATTTTT------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
CTCGAGTCCTCCACAACACCCACATCGCTGGATCGTTTCATTCCATGCCGGTGAGTTT---------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------ATA-----TTTTA--TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAA------------------------------------------------------------------------------------------TTATTTTGTAAAGTTTATTGAACTTTACATACAAGCCGTTATT------------------------------------------------------------------------------GCTACGTCATCTTTTCCGCTTTCAAT-GAA--C-----------AAAAAAAAGCAG--AAAAACAGAAAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--C-----------AAAAAAAAGCAG--AAAAACC.....2211.001010000
droBip1
CTCGAGTCCTCCACCACGCCCACATCGCTGGACAGGTTCATTCCCTGCAGGTGAGACT---------------------------------------------------------------------------------------------------------------------------------------------C--------------------------------TTT---AATTTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTAAAAACAAATT---------------------AACAATCTTGTTTAGTTTTCCTGCAAAGTTTGTTGAACTC--C--ACGAGCCGTTAT-----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
TTGGAATCGTCGACCACACCGACATCGCTGGATCGTTTCATACCATGCAGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................GATCGTTTCATACCATGCAGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
droPer2
TTGGAATCGTCGACCACACCGACATCGCTGGATCGTTTCATACCATGCAGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............ACACCGACATCGCTGGATCGTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003300000
droWil2
TTGGAATCATCAACGACACCAACATCATTGGATCGCTTTATACCATGCAGGTGAGTTACA-------------------------------------------------------------------------------------------------------------------------------------------CATACACACACACACATACATACACAGGGCCATTGA----------------AA-------------------------------------------------------------------------------------------------------------------------------------------GG------GC------------------------CACTAAAGCACATTGAACTCGTCCAAGTCCAACTCCAACTCCAACCTGGGGGCTTCAGCTAAAGCCGCCGTTATTTTGTTTTG------------------------------------------TTT------------------------------------------------------------------------TTCTGCTACATCATCTTTTCCGCTTTCGAGCGTGTGTGTATGTGTGCAGC---------------AAAAGAACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
ATTTTTTTTTTTTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT--------TTTTTTTTCTTCTTTTCT-CCCCT--------------------------------CTCT--GG-AACAGAACGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTTT--------TTTTTTTTC.................................................................32190.051000000000000000000000000000000000000000000000000000000000001000
ATTTTTTTTTTTTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTT................................................................................................................25200.051000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTT..............................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
..TTTTTTTTTTTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTT...................................................................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTT--------TTTTTTTT..................................................................18200.051000000000000000000000000000000000000001000000000000000000000000
ATTTTTTTTTTTTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTT..................................................................................................................23200.051000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTT--------TTTTTTTTC.................................................................23200.051000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTT..................................................................................................21200.051000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTT--------TTTTTTT...................................................................18200.051000000000000000000000000000000000000001000000000000000000000000
ATTTTTTTTTTTTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTTTTTTTTTTT.......................................................................................................34200.051000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTT.................................................................................................22200.051010000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTTTTTTT...................................................................................................19200.051000000000000000000000000000000010000000000000000000000000000000
ATTTTTTTTTTTTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTTTTTTTTT.........................................................................................................32200.051000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTT--------TTTTTT....................................................................18200.051000000000000000000000000000000000000001000000000000000000000000
..TTTTTTTTTTTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTTTTTTTTTTTTTTT...................................................................................................36200.051000000000000000000000000000000000000000000000000000000000000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTT........................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTT.......................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTT......................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
droMoj3
CTGGAAGCGTCCACAACGCCAACATCGTTGGATCGTTTCATACCCTGCAGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CAAGCTGTTGTTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTTTGTTTCTTATTTCTTATTTTTTTTTTTTTTTTTTGTT--TTT---------------------TAC-----------------------------------------AGTGCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 04:14 PM