ID:

dsi_25283

 Coordinate:

2r:12530402-12530551 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CCAAGGCTGTGGCTGTCTCTGATTTAACTTCAGTGTCCTTTACTTCAGGTTTCTTTGGTTCTTCAATCTTTTCTTCAGATATCTTTTCAGCTACGACCTCAGATACTTCTGGTTTCTGGGACTTCTGTTCCACATCCTGATCACCTTGTTTTTGTGCACTAGCCTCTAGTTCTTTTTCTTCCAGGACTTGCTTATCCAAGTCCTTTTTTTCAGATATCTTGGGTTCTTCAATCTTCTTTTGTATTGAATG
**************************************************...(((((................((((((((((..((......))....)))))..)))))....((((((....))))))..(((((..(((.........))).(((((...)))))...........))))).........)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
.......TGTGGCTGTCTCTGATTTAACTTCAGTG....................................................................................................................................................................................................................... 28 0 3 0.67 2 2 0 0 0 0 0
.........TGGCTGTCTCTGATTTAACTTCAGTG....................................................................................................................................................................................................................... 26 0 4 0.25 1 0 1 0 0 0 0
.................................TGTCCTTTACTTCAGGTTTCTTTGGT............................................................................................................................................................................................... 26 0 5 0.20 1 0 1 0 0 0 0
.......TGCGGCTGTCTCTGATTTAACTTC........................................................................................................................................................................................................................... 24 1 6 0.17 1 1 0 0 0 0 0
.......TGTGGCTGTCTCTGATTTAACTTC........................................................................................................................................................................................................................... 24 0 6 0.17 1 1 0 0 0 0 0
...............................................................................................................................................................TAGCCTCTACTGCTTTGTCT....................................................................... 20 3 13 0.15 2 0 0 1 0 0 1
.......................................................TGGCTCTTCAATCTTTTCTTCAGA........................................................................................................................................................................... 24 1 7 0.14 1 1 0 0 0 0 0
......................................TTTACTTCAGGTTTCTTTGGTTCTTC.......................................................................................................................................................................................... 26 0 10 0.10 1 0 0 1 0 0 0
..........................................................................................TTACGACGTCAGATCCTTCT............................................................................................................................................ 20 3 11 0.09 1 0 0 0 0 1 0
............................................TCAGGTTTCTTTGGCTCTTCAATCTTT................................................................................................................................................................................... 27 1 11 0.09 1 1 0 0 0 0 0
...............................................................................................................................................................TAGCCTCTACTCCTTTGTCT....................................................................... 20 3 12 0.08 1 0 1 0 0 0 0
..........................ACTTCTGTCTCCTTTACGTC............................................................................................................................................................................................................ 20 3 20 0.05 1 0 0 0 1 0 0
.............................................................................................................TGGTTTCTGGGACAT.............................................................................................................................. 15 1 20 0.05 1 0 0 0 1 0 0

Anti-sense strand reads

GGTTCCGACACCGACAGAGACTAAATTGAAGTCACAGGAAATGAAGTCCAAAGAAACCAAGAAGTTAGAAAAGAAGTCTATAGAAAAGTCGATGCTGGAGTCTATGAAGACCAAAGACCCTGAAGACAAGGTGTAGGACTAGTGGAACAAAAACACGTGATCGGAGATCAAGAAAAAGAAGGTCCTGAACGAATAGGTTCAGGAAAAAAAGTCTATAGAACCCAAGAAGTTAGAAGAAAACATAACTTAC
**************************************************...(((((................((((((((((..((......))....)))))..)))))....((((((....))))))..(((((..(((.........))).(((((...)))))...........))))).........)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M023
head
 M024
male body		 SRR902009
testis
 O002
Head
 GSM343915
embryo
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
..........................................................................................................................................................................................................GAAAAAAAGTCTATAGAACC............................ 20 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGAAAAGAAGTCTATAG....................................................................................................................................................................... 18 0 7 2.57 18 0 0 0 0 18 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CCAAGAAGTTAGAAGAAA........... 18 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AAAAAAAGTCTATAGAACCCAAGAAGTT................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CCCAAGAAGTTAGAAGAAA........... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................AAAGTCGATGCTGGAGTCTA.................................................................................................................................................. 20 0 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0 0
...................................................................................AAAAGTCGATGCTGGAGTCTA.................................................................................................................................................. 21 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
....................CTAAATTGAAGTCACAGGAAATGAAGT........................................................................................................................................................................................................... 27 0 4 0.50 2 0 1 0 0 0 0 0 1 0 0 0 0
....................................................................................AAAGTCGATGCTGGAGTC.................................................................................................................................................... 18 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGAAAAGAAGTCTATAGAAAAGTCGA.............................................................................................................................................................. 26 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................AGAAAAGTCGATGCTGGAGTCTA.................................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................ATCGGAGATCAAGAAAAAGGAGGT................................................................... 24 1 5 0.40 2 0 0 0 2 0 0 0 0 0 0 0 0
........................................................................................TCGATGCTGGAGTCTATGAAGACCAA........................................................................................................................................ 26 0 6 0.33 2 0 2 0 0 0 0 0 0 0 0 0 0
........................................................CCAAGAAGTTAGAAAAGA................................................................................................................................................................................ 18 0 12 0.33 4 0 4 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TCAAGAAAAAGAAGGTCCTA............................................................... 20 1 7 0.29 2 2 0 0 0 0 0 0 0 0 0 0 0
..................................................AAGAAACCGAGAAGTTAGAAAAGAAGT............................................................................................................................................................................. 27 1 7 0.29 2 0 0 0 2 0 0 0 0 0 0 0 0
........................................................CCAAGAAGTTAGAAAAGAAGT............................................................................................................................................................................. 21 0 7 0.29 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................GAAGACAAGGTGTAGGACTAGTGGAA....................................................................................................... 26 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................TTAAGTCACAGGAAATGAAGTCCAAA...................................................................................................................................................................................................... 26 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................ACCCTGAAGACAAGGTGTAG.................................................................................................................. 20 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
....................CTAAATTGAAGTCACAGG.................................................................................................................................................................................................................... 18 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CAAGGTGTAGGACTAGTGGAACAA.................................................................................................... 24 0 9 0.22 2 0 0 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................ATCGGAGATCAAGAAAAAGGAGGTCCT................................................................ 27 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................AAGAAGACTATAGAAAA................................................................................................................................................................... 17 1 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................GAGATCGGAGATCAAGAAAAAGAAGGT................................................................... 27 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................AATTGAAGTCACAGGAAA................................................................................................................................................................................................................. 18 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................TAAATTGAAGTCACAGGAAAT................................................................................................................................................................................................................ 21 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................CGATGCTGGAGTCTATGAA.............................................................................................................................................. 19 0 11 0.18 2 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................GAAAAAGAAGGTCCTGAACGAATAGGTTC.................................................. 29 0 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................AGAAAAAGAAGGTCCTGAACGA.......................................................... 22 0 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................AGTCGATGCTGGAGTCTA.................................................................................................................................................. 18 0 12 0.17 2 1 0 1 0 0 0 0 0 0 0 0 0
..............................................TCCAAAGAAACCAAGAAGTTA....................................................................................................................................................................................... 21 0 12 0.17 2 2 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TCAAGAAAAAGAAGGTCCTAAAC............................................................ 23 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................GAAAAAGAAGGTCCTGAACGAATA....................................................... 24 0 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................AAGAAACCAAGAAGTTAGAAAAG................................................................................................................................................................................. 23 0 13 0.15 2 2 0 0 0 0 0 0 0 0 0 0 0
................................................CAAAGAAACCAAGAAGTTAGAA.................................................................................................................................................................................... 22 0 13 0.15 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................CCAAAGAAACCAAGAAGTTAGA..................................................................................................................................................................................... 22 0 13 0.15 2 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TGCTGGAGTCTATGAAGA............................................................................................................................................ 18 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................AGAAACCAAGAAGTTAGAAAAGAAGTC............................................................................................................................................................................ 27 0 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................GAAACCAAGAAGTTAGAAAAGAAGTCTA.......................................................................................................................................................................... 28 0 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0 0
....................................................GAAACCAAGAAGTTAGAAAAGAAGTC............................................................................................................................................................................ 26 0 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................AAACCGAGAAGTTAGAAAAGACGTCT........................................................................................................................................................................... 26 2 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TCAAGAAAAAGAAGGTCCTG............................................................... 20 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................AGAAACCAAGAAGTTAGAAAAGAAGTCT........................................................................................................................................................................... 28 0 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................AAGAAACCGAGAAGTTAGAAAAGAAGTCT........................................................................................................................................................................... 29 1 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................TCGATGCTGGAGTCTATGAAGA............................................................................................................................................ 22 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................AAGAAACCAAGAAGTTAGAAAAGAAGTC............................................................................................................................................................................ 28 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................TGTAGGACTAGTGGAACAAA................................................................................................... 20 0 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................AGGACTAGTGTAACAAAA.................................................................................................. 18 1 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................GTAGGACTAGTGGAACAAAA.................................................................................................. 20 0 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................AGGACTAGTGGAACAAAAACA............................................................................................... 21 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TGTAGGACTAGTGGAACAAAA.................................................................................................. 21 0 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................AAAGAAGTTAGCAAAGAAGT............................................................................................................................................................................. 20 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................................................................................................................CAAGAAGAAGCAGGTCCTG............................................................... 19 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................GAAATGAAGTCCAAAGAAACCAAGA............................................................................................................................................................................................ 25 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AGAAGAAGAAGCTCCTGAAGGA.......................................................... 22 3 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0 0
....................................GGAAATGAAGTCCAAAGAA................................................................................................................................................................................................... 19 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................AAATGAAGTCCAAAGAAACCAAGAAGT......................................................................................................................................................................................... 27 0 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................AAGTCCAAAGAAACCAAGAAGT......................................................................................................................................................................................... 22 0 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................GGAAGTCCAAAGAAACCAAGAAGTTA....................................................................................................................................................................................... 26 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................AAGTCCAAAGAAACCAAGAAGTTAGAAA................................................................................................................................................................................... 28 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CGATGCTGGAGTCTATGAAG............................................................................................................................................. 20 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................AAAAGAAGTCTATGGAACTGT................................................................................................................................................................. 21 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 1 0
..........................................................AAGAAGTTAGCAAAGAGGT............................................................................................................................................................................. 19 2 11 0.09 1 0 0 0 0 0 0 0 0 0 1 0 0
..................................................AAGAAACCAAGAAGTTAGAAAAGAAG.............................................................................................................................................................................. 26 0 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................TGAAGTCCAAAGAAACCAAGAAGTTA....................................................................................................................................................................................... 26 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TCGATGCTGGAGTCTATG................................................................................................................................................ 18 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................GGTCGATGCTGGAGTCTA.................................................................................................................................................. 18 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AAAAGTCTATCGAAGCCA.......................... 18 2 12 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................GTCGATGCTGGAGTCTAT................................................................................................................................................. 18 0 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................CCAAGAAGTTAGAAAAGAA............................................................................................................................................................................... 19 0 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................TCCAAAGAAACCAAGAAG.......................................................................................................................................................................................... 18 0 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................TCCAAAGAAACCAAGAAGTTAG...................................................................................................................................................................................... 22 0 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................TCCAAAGAAACCAAGAAGTTAGAAA................................................................................................................................................................................... 25 0 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................TCCAAAGAAACCAAGAAGTTAGAA.................................................................................................................................................................................... 24 0 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................TCCAAAGAAACCAAGAAGTTAGAAAAG................................................................................................................................................................................. 27 0 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................TCCAAAAAAACCAAGAAGTTAGAA.................................................................................................................................................................................... 24 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................TCCAAAGAAACCAAGAAGTTAGAAAA.................................................................................................................................................................................. 26 0 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................TCGATGCTGGAATCT................................................................................................................................................... 15 1 13 0.08 1 0 0 0 0 0 0 0 0 0 1 0 0
...............................................CCAAAGAAACCAAGAAGTTAGAAAAG................................................................................................................................................................................. 26 0 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................CAAAGAATCCAAGAAGTTAGA..................................................................................................................................................................................... 21 1 13 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0
.................................................AAAGAAACCAAGAAGTTAGAA.................................................................................................................................................................................... 21 0 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................AAGAAACCAAGAAGTTAG...................................................................................................................................................................................... 18 0 13 0.08 1 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................AGACCAAGAAGTTAGACAAGGA............................................................................................................................................................................... 22 3 13 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0
...............................................CCAAAGAAACCAAGAAGT......................................................................................................................................................................................... 18 0 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TGGACGAAGAGGTTCAGGAT............................................. 20 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 1
...............................CTACAGGAAATGAGGTCCA........................................................................................................................................................................................................ 19 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 1
..............................................................................................................................................................................................................................AAAGTAGTTAGAAGAAAAAAT....... 21 3 17 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................GAAGTCTGAAGACAAGTCG............................................................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ACTAGTGGAAAAAAA.................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................TCCAAGAAGTTAGATAAG................................................................................................................................................................................. 18 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................AAAGGAGTCCAAAGAAAC................................................................................................................................................................................................. 18 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:12530352-12530601 + dsi_25283 CCAAGGCTGTGGCTGTCTCTGATTTAACTTCAGTGTCCTTTACTTCAGGTTTCTTTGGTTCTTCAATCTTTTCTTCAGATATCTTTTCAGCTACGACCTCAGATACTTCTGGTTTCTGGGACTTCTGTTCCACATCCTGATCACCTTGTTTTTGTGCACTAGCCTCTAGTTCTTTTTCTTCCAGGACTTGCTTATCCAAGTCCTTT---------------------------------TTTTCAGATATCTTGGGTTCTTCAATCTTCTTTTGTATTGAA---TG
droSec2 scaffold_1:9362966-9363215 + CCAAGGCTGTGGCTGTCTCTGATTTAACTTCAGTGTCCTTTACTTCAGGTTTCTTTGATTCTTCAACCTTTTCTTCAGATATCTTCTCAGCTACGACCTCAGATACTTCTGGCTTCTCGGACTTCTTTTCGACATCCTGATCACCTTGTTTTTGAGCACGTGCCTCTAGTTCTTTTTCTTCCAGGACTTGCTTATCCAAGTCCTTT---------------------------------TTTTCAGATATCTTGGATTCTTCAATCTTCCTTTGTATTGAA---TG
dm3 chr2R:11864666-11864915 + CCAAGACTGTAGCTTTCTCTGATTTAGCTTCAGTGTCCATTTCTTCAGGTTTCTTTGGTTCTTCAATCTTTCCTTCAGATATCTTCTCAGCTACGACCTCAGATACTTCTGGTTTCTGGGACTTCTGTTCGATATCCTGATCACCTTGCTTTTTCGCACTTGCCTTTAGTTCTTTTTCTTCCAGGAATTCCTTATCCAAGTCTTTT---------------------------------TTTTCTGATCTCTTGGGTTCTTCAATCTTCTTTTCTATTGAA---TG
droEre2 scaffold_4845:13994831-13995110 - CCAAGGCTTTGGCTTTCTCTGATTTAACTTCAGTGTCCTTTACTTCAGATTTCTTGGGTTCTTCAATCTTTTCTTCAGAAATCTTCTCAGCTACGACCTCAGATACTTCTGGTTTCTGGGACTTCTGGTCGGCATCCTGATCAGCTTGCTTTTGTACACTATCCTCAAGTTGCTTTTCTTCCAGTGCTTGTTTATCCAAGGCTTTGGC---TTTCTCTGATTTCTCTTCAGTTTCCTTTACTTCAGGTTTCTTGGATTCTTCAATCTTTTCCTCAGATATCTT---
droYak3 2R:17121832-17122111 - CCAAGGCTTTGGCTTTCTCTGATTTAACATCAGTGTCCTTTACTTCAGGTTTCTTTGGTTCCTCAATCTTTTCTTCAGACATCTTCTCAGCTACGACCTCAGATACTTCTGGTTTCTGGGACTTCTGTTCGACATCCTGATCAGCTTGCTTTTGTGCACTAGTCTCTAGTTCCTTTTCCTCCAGGACTTGTTTATCAAAGGCTTCGGC---TTTCTCTGATTTATCTACAGTGTCCTTTACTTCAGGTTTCTTGGGTTCCTCAATCTTTTCTTCAGATATCTT---
droEug1 scf7180000409672:770395-770664 + CGAAAGCTTCACCCTTCTCTGATTTCGTTTCAGCGTCCTTTATTTCAGGCTTCTTGGGTTCTTCAATCTTTTCCTCGGAAATCTTCTCAGCGACGACCTCAGATACTTCTGGTTTCTGGGACTTTTGATCGATATCCTTATCAGCTGGCTTTTGTCCCTCAACTTCCAACTGCTTTTCCTCAAGAACTTGCTTATCGAAAGCTTCACC---CTTCTCTGATTTCGTTTCAGCGTCCTTTATTTCAGGCTTCTTGGGTTCTTCAATCTTTTCCT-------------
droBia1 scf7180000302292:2035514-2035793 + CCAAAGCTTCGGCCTTCTGTGATTTGGTTTCCGTTTCTTTTATTTCCGGCTTTATCGATTCTTCGATATTTTCTTCTGATATTTTCTCAGCAACGACCTCAGTTACTTCTGGTTTTTGGGATTTCTGATCAACATCTTTGTCAGCTTGTTTTTGAGCTTCAACTTTTATTTCCTTTTCTTCCAGAATTTGCTTCTCCAAGGCTTTAGC---ATTCTTTAACTTGGTTTCAGTTTCCTTTATTTCAGGTTTTATAGATTCTTCGATGTTTTCTTCTGATATTTT---
droTak1 scf7180000415795:702476-702755 - CCAAAGCCTCTGCCTTCTCTGATTTAGTTTCAGTATCCTTTATTTCAGGCGTCTTGGGTTCATCGATCCTTTCTTCTGAAATCTTTTCCGCAGCGACCTCTGATACTTCTGGTTTCTGGGACTTCTGTTCGACATCTTTGTCAGCTTGCTTTTGAGCTTGGACTTCCAAATGCTTTTCTTCCAAGATTTGCTTCTCCAAAGCTTCTGC---CTTCTCTGATTTAGTTTCAGTATCCTTTATTTCAGGCTTTTTGGGTTCATCGATCCTTTCTTCTGAAATCTT---
droEle1 scf7180000491107:864713-864980 + CCAAAGCTTCAGCCTTCTCCAACTTAGTTTCAGAATCCTTTATTTCAGGCTTTTTAGGCTCTTCAATCTTTTCTTCGGATATCTTCTCTGCAACGACTTCAGATACTTCTGGCTTCTGGGATTTCTGAGCAATATCCTTGTCAGCTTGCTTTTGAGCCTCAGCTTGCAATTGTATTTCCTCTA---------------CAGCTTCAGC---CTTCTCTAACTTAGTTTCAGAATCCTTTATTTCAGGCTTGTTAGGCAGTTCAATTTTTTCTTCGGATATCTTCTG
droRho1 scf7180000779911:237320-237599 - CCAAAGCCTCTGCCTTCTCTGATTTAGTTTCCGAATCCTTTATCTCAGGCTTCTTTGGCTCATCAATCTTTTCTTCAGTAATCTTCTCTGCAATGACTTCGGATACTTCTGGTTTCTGGGATTTCTGTTCAATATCTTTGTCAGCTGGCTTTTGTGCCCCAGCTTCCAACTGTTTTTCTTCCAGGACTTGTTTCTCCAAAGCCTCTGC---CTTCTCTGATTTAGTTTCCGAATCCTTTATCTCAGGCTTCTTGGGCTCATCAATCTTTTCTTCAGTAATCTT---
droFic1 scf7180000453948:1111714-1111969 + CCAGTTCCTTGTCCTTCTCCGATTTGGCTTCTGCTTCCTTAACTTCCGGCTTCTTGGCTTCTTCAATCTTTTCTTCAGATATCTTCTCTGCAACGACTTCAGATACTTCTGGTTTCTGGGATTGAAGTTCGACATCCTTGTCGAATTGCTTTTGTGCCTCAGCTTCCAGTTGTTTTTCTTCCAGGATCTGTTTTTCCAGTTCCTTGGC---CTTCTCCGATTTGGCTTCGGTTTCCTTAACTTCCGGCTTCTTGGCTTC---------------------------
droKik1 scf7180000302385:1089675-1089885 + CCAAAGCCTTTGCTTTCTTTGCCTTAGATTCAGCATCCTTTACCTCAGGCTTCTTGGCTTCTTCAACCTTTTCTTCGGAAATCTTTTCTGCAGGAACCTCAGAAACTTCTGCCTTTTCGGATTTCTTCTTAACATCTTGCTCAGCATGTTTTTGTTTCTCAGCTTCCAATTTTTGTTCTTCGATAGTTTGTTTTTCCAAAGACGTATC---AAG------------------------------------------------------------------------
droAna3 scaffold_13266:11860274-11860520 - CCAAAGCCTTGGCCTGATCGGACTTAGCTTCAGATTCCTTGACTTCCGGCTTCTTGGATTCTTCCGCCTTTTCCTCTGATATTTCCTCGGCAAGCACTTCAGATACTTCCGCCGTCTCTGATTTCTTTTCAGACGCCGATTCGGCTTGTTTCTGGGTCTTAGCATCTAATTTCTGCTCTTCCAGAGACTGCTTCTCCAAAGCCCTTGC---TTCGTCTGGTGTAGCTTCCGAGTCTTCG------------------------------------GTGATTTTGTG
droBip1 scf7180000396547:611293-611538 + CCAAAGCCTTTGCTTGATC-GGTTTAGCTTCCGATTCCTTGACTTCCAATTTCTTAGATTCATCCACCTTTTCCTCAGATATTTTCTCAGCGAGGACTTCAGATACTTCGGCCTTCTCGGATTTCTTGTCAGACTCCAGTTCTCCTTGTTTTTGGGTCTTTGCATCCAACGGCTGCCCTTCCAGAGATTGTTTCTCCAAAGCTTTTGC---TTCAATCGATTCAGCTTCCGATTCATCGCCT------------------------------------TTTTTGTG
dp5 3:18967963-18968197 - CCAACGCCATTGCTTTCTGTACCTTAGCCTTGGAATCCCTAACATCCGCTTTCTTGCTTTCTTCAACCTGTTCTTCAGATGTTTTTTCAGCAATAACCTCAGATTCTTCTGCCTTCTGGACCATCTTTTCGGCATCCTTCTCAGTTTGCTTCTGTTTTGTCTCATCCAGTTGTTTCTCCTCGAGTTCTTGCTTTTCCAGTGCCTTTCC---TTTCTGTGCCTTAGCCTCGGCAACCTT------------------------------------------------
droWil2 scf2_1100000004558:876032-876258 + CCAAGGCCTTGGCATTTTGAGCTTCAGCTTCCGAATCCTTTACGCTAGGTTTCTGTGTCTCTTCCACTTTTTCTTCAGTTATCTTTTCGGCAACAACTTCGGAAACTTCGCCTTGTTGAGCTTTCTTCTCGGCATCTTTTTCGGCTTGCTTCTGTTTCTTCGCATCCAGTTCCTTTTGTTCCAGGGATTTCTTCTCCAAGGCCTTGGC---ATTTTGAGCTTCAGCTTTC--------------------------------------------------------
droVir3 scaffold_12875:17293155-17293407 + CTAGTACCTTCGCCTTTTGGTCTTCACTTTCAGATTCCTTTACTTCAAGCTTCTTACTCTCAGGAACCTTTTCTTTGGAAACCTTCTCTGCAACGACTTCAGATACTTCTCCTTTCTGGGCTCTCTTTTCAGCATCCTTCTCGGCTTGTTTCTTCTGTTTGGCATCCAGTTTCTTCTCTTCAATTAGTTGTTGTTCTAGTACCTTCGC---CTTTTGGGCTTCACTTTCAGATTCCCCTACTTCAAGCTTCTTACT------------------------------
droMoj3 scaffold_6496:10714205-10714460 - CAAGTACCTTTGCCTTTTGAGACTCTGCTTCCGATTCCTTAGTTTCGGGTTTCTTACTCTCGGGGACTTTCTCTTCCGATACTTTCTCAGCGATGACTTCAGATACTTCTCCCTTTTGGGCTTTCGCTTCAGCTTCCTTTTGAGCTGGTTTTTCCGGTTTTGCATCCAGTTTTTGCTCTTCGGCTGATTCTTTTTCAAGTACCTTTGC---CTTTTGAGACTCTGCTTCCGATTCCTTAACCACGGGTTTCATACTCTC---------------------------
droGri2 scaffold_2779:145-406 - CCAGAATCTTTGCCTTTTGAGCTTCAGCTTCAGATTCCTTGACACCTGGCTTCTTGCTTTCTGGAGTCTTTTCTTCAGATACTTTCTCGGCAACAACTTCAGATACTTCTCCCTTCTGGGCCTTCTGTTCAGCATCCTTTTCTGCTTGTTTGTTTTTCTTCGTCTCCAGTTTTTGCTCATCGATAGATTGTCTCTCAAATGGCACTTCTTCTTTGTTGGCCTCTCCTTCAGTCGAATCCTTTTTGAGCAACT---------------------GTAATTGT---TC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCAAGGCTGTGGCTGTCTCTGATTTAACTTCAGTGTCCTTTACTTCAGGTTTCTTTGGTTCTTCAATCTTTTCTTCAGATATCTTTTCAGCTACGACCTCAGATACTTCTGGTTTCTGGGACTTCTGTTCCACATCCTGATCACCTTGTTTTTGTGCACTAGCCTCTAGTTCTTTTTCTTCCAGGACTTGCTTATCCAAGTCCTTT---------------------------------TTTTCAGATATCTTGGGTTCTTCAATCTTCTTTTGTATTGAA---TGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......TGTGGCTGTCTCTGATTTAACTTCAGTG...........................................................................................................................................................................................................................................................2830.67200000020000000000
.........TGGCTGTCTCTGATTTAACTTCAGTG...........................................................................................................................................................................................................................................................2640.25100000001000000000
.................................TGTCCTTTACTTCAGGTTTCTTTGGT...................................................................................................................................................................................................................................2650.20100000001000000000
.......TGTGGCTGTCTCTGATTTAACTTC...............................................................................................................................................................................................................................................................2460.17100000010000000000
......................................TTTACTTCAGGTTTCTTTGGTTCTTC..............................................................................................................................................................................................................................26100.10100000000010000000
droSec2
CCAAGGCTGTGGCTGTCTCTGATTTAACTTCAGTGTCCTTTACTTCAGGTTTCTTTGATTCTTCAACCTTTTCTTCAGATATCTTCTCAGCTACGACCTCAGATACTTCTGGCTTCTCGGACTTCTTTTCGACATCCTGATCACCTTGTTTTTGAGCACGTGCCTCTAGTTCTTTTTCTTCCAGGACTTGCTTATCCAAGTCCTTT---------------------------------TTTTCAGATATCTTGGATTCTTCAATCTTCCTTTGTATTGAA---TGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
CCAAGACTGTAGCTTTCTCTGATTTAGCTTCAGTGTCCATTTCTTCAGGTTTCTTTGGTTCTTCAATCTTTCCTTCAGATATCTTCTCAGCTACGACCTCAGATACTTCTGGTTTCTGGGACTTCTGTTCGATATCCTGATCACCTTGCTTTTTCGCACTTGCCTTTAGTTCTTTTTCTTCCAGGAATTCCTTATCCAAGTCTTTT---------------------------------TTTTCTGATCTCTTGGGTTCTTCAATCTTCTTTTCTATTGAA---TGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................GTTTCTGGGACTTCTGTTCGATATCCTGAT.................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................CGATATCCTGATCACCTTGCT........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...............................AGTGTCCATTTCTTCAGGTTT..........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TCCTTATCCAAGTCTTTT---------------------------------TTTTCTGA.......................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TCAGATACTTCTGGTTTCTGG.......................................................................................................................................................................2180.6350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005
.................................................................................TCTTCTCAGCTACGACCTCA.........................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TCAGATACTTCTGGTTTCTGGGACTTC.................................................................................................................................................................2770.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002
........................................................................................................ACTTCTGGTTTCTGGGACTTC.................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................GATACTTCTGGTTTCTGGGACTT..................................................................................................................................................................2370.1410000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................CTTCTGGTTTCTGGGACTTCT................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
droEre2
CCAAGGCTTTGGCTTTCTCTGATTTAACTTCAGTGTCCTTTACTTCAGATTTCTTGGGTTCTTCAATCTTTTCTTCAGAAATCTTCTCAGCTACGACCTCAGATACTTCTGGTTTCTGGGACTTCTGGTCGGCATCCTGATCAGCTTGCTTTTGTACACTATCCTCAAGTTGCTTTTCTTCCAGTGCTTGTTTATCCAAGGCTTTGGC---TTTCTCTGATTTCTCTTCAGTTTCCTTTACTTCAGGTTTCTTGGATTCTTCAATCTTTTCCTCAGATATCTT---SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................TGGGACTTCTGGTCGGCATCCTGATC................................................................................................................................................2621.0020000002
........................TAACTTCAGTGTCCTTTACTTCAGAT............................................................................................................................................................................................................................................2611.0011000000
............................................................................................................................................................................................................TGGC---TTTCTCTGATTTCTCTTCAGTT.....................................................2611.0011000000
.......................................................................................................................GACTTCTGGTCGGCATCCTGATCAGCT............................................................................................................................................2720.5011000000
..............................................................................................................................................................................................................................................TACTTCAGGTTTCTTGGATTCTTCAATC....................2850.4022000000
...............................................................................................................................................................................TTCTTCCAGTGCTTGTTTATCCAAGGC....................................................................................2780.3833000000
......................................................................TTCTTCAGAAATCTTCTCAGCTACGACC............................................................................................................................................................................................2830.3311000000
........TTGGCTTTCTCTGATTTAACTTCAGTG...........................................................................................................................................................................................................................................................2770.2922000000
...................................................................................................................................................................................................................................TCAGTTTCCTTTACTTCAGGTTT....................................2340.2511000000
............................................................................................................................................................................................TGTTTATCCAAGGCTTTGGC---TTTCTC.....................................................................2690.2222000000
...........................................................................................TACGACCTCAGATACTTCTGGTTTC..........................................................................................................................................................................2590.2221100000
......................................................................................TCAGCTACGACCTCAGATACTTCTGGTT............................................................................................................................................................................28100.2022000000
......................................................................................TCAGCTACGACCTCAGATACTTCTGG..............................................................................................................................................................................26100.2022000000
.......TTTGGCTTTCTCTGATTTAACTTCAGTG...........................................................................................................................................................................................................................................................2870.1411000000
........TTGGCTTTCTCTGATTTAACTTCAG.............................................................................................................................................................................................................................................................2570.1411000000
.........TGGCTTTCTCTGATTTAACTTCAGTG...........................................................................................................................................................................................................................................................2670.1411000000
..............................................................................................................................................................................................TTTATCCAAGGCTTTGGC---TTTCTCTGATT................................................................2980.1311000000
CCAAGGCTTTGGCTTTCTCTGATTT.....................................................................................................................................................................................................................................................................2580.1311000000
...................................................................................................................................................................................................CCAAGGCTTTGGC---TTTCTCTGATTT...............................................................2580.1311000000
CCAAGGCTTTGGCTTTCTCTGATT......................................................................................................................................................................................................................................................................2480.1311000000
..................................................................................................................................................................................................TCCAAGGCTTTGGC---TTTCTCTGATT................................................................2580.1311000000
................................................................................................................................................................................TCTTCCAGTGCTTGTTTATCCAAGGCTT..................................................................................2880.1310100000
...............................................................................................................................................................................................TTATCCAAGGCTTTGGC---TTTCTCTG...................................................................2580.1311000000
...................................................................................................................................................................................................CCAAGGCTTTGGC---TTTCTCTGATT................................................................2480.1311000000
..............................................................................................................................................................................................TTTATCCAAGGCTTTGGC---TTTCTCTG...................................................................2680.1311000000
...............................................................................................................................................................................................TTATCCAAGGCTTTGGC---TTTCTCTGA..................................................................2680.1311000000
........................................................................................................................................................................................TGCTTGTTTATCCAAGGCTTTGGC---T..........................................................................25100.1011000000
.................................................................................................................................................................TCCTCAAGTTGCTTTTCTTCCAGTGCT..................................................................................................27100.1011000000
....................................................................................................................................................................TCAAGTTGCTTTTCTTCCAGTGCTTG................................................................................................26110.0911000000
............................................................................................................................................................................................TGTTTATCCAAGGCTTTGGC---T..........................................................................21110.0911000000
....................................................................................................................................................................TCAAGTTGCTTTTCTTCCAGTGCT..................................................................................................24110.0911000000
...................................................................................TTCTCAGCTACGACCTCAGA.......................................................................................................................................................................................20110.0911000000
....................................................................................................................................................................TCAAGTTGCTTTTCTTCCAGTGC...................................................................................................23120.0811000000
.................................................................................................................................................................TCCTCAAGTTGCTTTTCTTCC........................................................................................................21120.0811000000
droYak3
CCAAGGCTTTGGCTTTCTCTGATTTAACATCAGTGTCCTTTACTTCAGGTTTCTTTGGTTCCTCAATCTTTTCTTCAGACATCTTCTCAGCTACGACCTCAGATACTTCTGGTTTCTGGGACTTCTGTTCGACATCCTGATCAGCTTGCTTTTGTGCACTAGTCTCTAGTTCCTTTTCCTCCAGGACTTGTTTATCAAAGGCTTCGGC---TTTCTCTGATTTATCTACAGTGTCCTTTACTTCAGGTTTCTTGGGTTCCTCAATCTTTTCTTCAGATATCTT---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................TCCTGATCAGCTTGCTTTTGTGCACT..............................................................................................................................261013.501351268000100099
.....................................................................TTTCTTCAGACATCTTCTCAGCTACGA..............................................................................................................................................................................................27210.5021082000000011
.....................................................................TTTCTTCAGACATCTTCTCAGCTACGACC............................................................................................................................................................................................29210.5021018300000000
...................................................................................................................................................................................................................................ACAGTGTCCTTTACTTCAGGTTTCTT.................................26110.0010000000000010
.............................................................................................................................................................................................................................................TTACTTCAGGTTTCTTGGGTTCCTC........................2569.5057000000000057
...................................................................................................................................................................................................................................ACAGTGTCCTTTACTTCAGGTTTCT..................................2519.00909000000000
......................................................................................................................................TCCTGATCAGCTTGCTTTTGTGCAC...............................................................................................................................25115.91651428211000010
...........................................................................................................................................................GCACTAGTCTCTAGTTCCTTTTCCTCC........................................................................................................2765.1731000000000031
...............................................................................................................................................................................TTCCTCCAGGACTTGTTTATCAAAGGC....................................................................................2715.00502300000000
.....................................................................TTTCTTCAGACATCTTCTCAGCTACG...............................................................................................................................................................................................2625.001009100000000
......................................................................TTCTTCAGACATCTTCTCAGCTACGACC............................................................................................................................................................................................2824.00805300000000
..........................................................................................................................TTCTGTTCGACATCCTGATCAGCTTGC.........................................................................................................................................27103.7037040000000033
.............................TCAGTGTCCTTTACTTCAGGTTTCT........................................................................................................................................................................................................................................2583.2526023200000001
..................................................................................................................................................................TCTCTAGTTCCTTTTCCTCCAGGACT..................................................................................................2613.00301200000000
........TTGGCTTTCTCTGATTTAACATCAGTG...........................................................................................................................................................................................................................................................2713.00303000000000
..........................................................................................................................................................TGCACTAGTCTCTAGTTCCTTTTCCTC.........................................................................................................2763.0018011000000016
..........................................................................................................................................GATCAGCTTGCTTTTGTGCACTAGTC..........................................................................................................................26103.0030022000000026
......................................................................................TCAGCTACGACCTCAGATACTTCTGG..............................................................................................................................................................................2633.00903000000006
...........................................................................................................................................................................................................TCGGC---TTTCTCTGATTTATCTACAGTG.....................................................2713.00303000000000
..................................................................................................TCAGATACTTCTGGTTTCTGGGACT...................................................................................................................................................................25112.9132122000000009
......................................................................................TCAGCTACGACCTCAGATACTTCTGGT.............................................................................................................................................................................2732.33705000000002
.....................................................................TTTCTTCAGACATCTTCTCAGCTACGAC.............................................................................................................................................................................................2822.00404000000000
....................................................................................................................................................................................................................TTCTCTGATTTATCTACAGTGTCCTT................................................2612.00202000000000
......................................................................TTCTTCAGACATCTTCTCAGCTACG...............................................................................................................................................................................................2522.00404000000000
.............................................................................................................................................................................................................GGC---TTTCTCTGATTTATCTACAGTG.....................................................2512.00202000000000
...............................................................................................................................................................................TTCCTCCAGGACTTGTTTATCAAAGG.....................................................................................2612.00201100000000
...........................................TTCAGGTTTCTTTGGTTCCTCAATCTT........................................................................................................................................................................................................................2712.00202000000000
................................................................................................................................................................................TCCTCCAGGACTTGTTTATCAAAGGC....................................................................................2612.00200200000000
...............................................................................................................................................................................TTCCTCCAGGACTTGTTTATCAAAGGCT...................................................................................2812.00202000000000
...................................................................................................................................................................................TCCAGGACTTGTTTATCAAAGGCT...................................................................................2412.00201100000000
..................................................................................................................................................................TCTCTAGTTCCTTTTCCTCCAGGAC...................................................................................................2512.00202000000000
.......................................................................TCTTCAGACATCTTCTCAGCTACGACC............................................................................................................................................................................................2722.00404000000000
......................................................TTGGTTCCTCAATCTTTTCTTCAGACA.............................................................................................................................................................................................................2712.00202000000000
.........................................................................................................................................................................TTCCTTTTCCTCCAGGACTTGTTTATC..........................................................................................2712.00201100000000
...........................................................................................................................TCTGTTCGACATCCTGATCAGCTTGC.........................................................................................................................................26102.0020020000000000
...................................TCCTTTACTTCAGGTTTCTTTGGT...................................................................................................................................................................................................................................2412.00202000000000
..................................................................................................TCAGATACTTCTGGTTTCTGGGACTTCT................................................................................................................................................................28111.6418000000000018
.....................................................................TTTCTTCAGACATCTTCTCAGCTAC................................................................................................................................................................................................2521.50302000010000
...........................................................................................................................TCTGTTCGACATCCTGATCAGCTTG..........................................................................................................................................25101.5015015000000000
.......................................................................................................TACTTCTGGTTTCTGGGACTTCTG...............................................................................................................................................................24121.5018070000000011
..........................................................TTCCTCAATCTTTTCTTCAGACATC...........................................................................................................................................................................................................2521.50303000000000
.......................................................................................................................................................................................................................................TGTCCTTTACTTCAGGTTTCTTGGG..............................2551.40700000000007
..................................................................................................TCAGATACTTCTGGTTTCTGGGACTT..................................................................................................................................................................26111.181305000000008
..................................................................................................TCAGATACTTCTGGTTTCTGGGACTTC.................................................................................................................................................................27111.0912000000000012
......................................................................TTCTTCAGACATCTTCTCAGCTAC................................................................................................................................................................................................2421.00202000000000
...................................................................................................................................................................................................................TTTCTCTGATTTATCTACAGTGTCCTT................................................2711.00101000000000
...............................................................................................................................................................................................................................ATCTACAGTGTCCTTTACTTCAGGTT.....................................2611.00101000000000
..................................................................................................................................................................................................TCAAAGGCTTCGGC---TTTCTCTGATT................................................................2511.00101000000000
........................................TACTTCAGGTTTCTTTGGTTCC................................................................................................................................................................................................................................2211.00100100000000
.............TTTCTCTGATTTAACATCAGTGTCCTT......................................................................................................................................................................................................................................................2711.00101000000000
............................................TCAGGTTTCTTTGGTTCCTCAATCTT........................................................................................................................................................................................................................2611.00100000000001
.......................................................................................................TACTTCTGGTTTCTGGGACTTCTGTTC............................................................................................................................................................2771.00734000000000
........................................................................................................................................................................................GACTTGTTTATCAAAGGCTTCGGC---T..........................................................................2511.00101000000000
...............................................................................................................................................................TAGTCTCTAGTTCCTTTTCCTCCAGGACT..................................................................................................2911.00101000000000
....................................................................................................................................................................................CCAGGACTTGTTTATCAAAGGCTTC.................................................................................2511.00101000000000
.........................................................................................................................................................................................................................TGATTTATCTACAGTGTCCTTTACT............................................2511.00101000000000
..AAGGCTTTGGCTTTCTCTGATTTAACA.................................................................................................................................................................................................................................................................2711.00101000000000
....................................................................................................................................................................................................................TTCTCTGATTTATCTACAGTGTCCT.................................................2511.00101000000000
......................................TTTACTTCAGGTTTCTTTGGTTCCTCA.............................................................................................................................................................................................................................2711.00101000000000
........................................TACTTCAGGTTTCTTTGGTTCCTCAATCT.........................................................................................................................................................................................................................2911.00101000000000
............................................................................................................................................................................................................................TTTATCTACAGTGTCCTTTACTTCAGG.......................................2711.00101000000000
.................................................TTTCTTTGGTTCCTCAATC..........................................................................................................................................................................................................................1911.00101000000000
..............TTCTCTGATTTAACATCAGTGTCCTT......................................................................................................................................................................................................................................................2611.00101000000000
.............................TCAGTGTCCTTTACTTCAGGTTTCTTT......................................................................................................................................................................................................................................2711.00101000000000
...........................................TTCAGGTTTCTTTGGTTCCTCAATC..........................................................................................................................................................................................................................2511.00101000000000
..............................................................................................................................................................................TTTCCTCCAGGACTTGTTTATCAAAGGC....................................................................................2811.00101000000000
.......................................................TGGTTCCTCAATCTTTTCTTCAGACA.............................................................................................................................................................................................................2611.00101000000000
.........................................................................................................................................................................................................................TGATTTATCTACAGTGTCCTTTAC.............................................2411.00101000000000
.....................................................................................................................................................................................................................TCTCTGATTTATCTACAGTGTCCTT................................................2511.00101000000000
........................TAACATCAGTGTCCTTTACTTCAGGTT...........................................................................................................................................................................................................................................2711.00101000000000
........................................TACTTCAGGTTTCTTTGGTTCCTCAATC..........................................................................................................................................................................................................................2811.00101000000000
..........................................................................................................................................................................TCCTTTTCCTCCAGGACTTGTTTATC..........................................................................................2611.00100100000000
................................................................................................................................................................................TCCTCCAGGACTTGTTTATCAAAGGCT...................................................................................2711.00101000000000
........................................................................CTTCAGACATCTTCTCAGCTACGACC............................................................................................................................................................................................2621.00202000000000
.........TGGCTTTCTCTGATTTAACATCAGTG...........................................................................................................................................................................................................................................................2611.00101000000000
.....GCTTTGGCTTTCTCTGATTTAACA.................................................................................................................................................................................................................................................................2411.00101000000000
...........................................................................................TACGACCTCAGATACTTCTGGTTTCTGG.......................................................................................................................................................................28110.911001000000009
.............................................................................................................TGGTTTCTGGGACTTCTGTTCGACA........................................................................................................................................................2590.89805000000003
..............................................................................................................................................................................................................................................TACTTCAGGTTTCTTGGGTTCCTCAATC....................2860.83505000000000
..................................................................................................................................................TGCTTTTGTGCACTAGTCTCTAGTTCC.................................................................................................................2760.83505000000000
.............................TCAGTGTCCTTTACTTCAGGTTTC.........................................................................................................................................................................................................................................2480.75604200000000
..................................................................................................TCAGATACTTCTGGTTTCTGGGACC...................................................................................................................................................................25110.73810700000000
.................................................................................TCTTCTCAGCTACGACCTCAGATAC....................................................................................................................................................................................2530.67202000000000
.................................................................................TCTTCTCAGCTACGACCTCAGATACT...................................................................................................................................................................................2630.67201100000000
.......................................................................................................................................................................................................................................TGTCCTTTACTTCAGGTTTCTTGGGT.............................2650.60303000000000
..............................................................TCAATCTTTTCTTCAGACATCTTCTCAGC...................................................................................................................................................................................................2950.60302100000000
.......................................................................................................TACTTCTGGTTTCTGGGACTTCTGT..............................................................................................................................................................25120.58705100010000
...........................................................................................................................TCTGTTCGACATCCTGATCAGCTTGCT........................................................................................................................................2790.56505000000000
...............................................................................................................................TTCGACATCCTGATCAGCTTGCTTTTG....................................................................................................................................27110.55606000000000
......................................................................TTCTTCAGACATCTTCTCAGCTACGA..............................................................................................................................................................................................2620.50101000000000
.............................................................................................................................TGTTCGACATCCTGATCAGCTTGCTTT......................................................................................................................................27100.50505000000000
...............................................................................CATCTTCTCAGCTACGACCTCAGA.......................................................................................................................................................................................2420.50101000000000
.......................................................................................CAGCTACGACCTCAGATACTTCTGGTT............................................................................................................................................................................2720.50101000000000
......................................................................TTCTTCAGACATCTTCTCAGCTACGACCT...........................................................................................................................................................................................2920.50101000000000
..............................................................................ACATCTTCTCAGCTACGACCTCAGA.......................................................................................................................................................................................2520.50101000000000
......................................................................TTCTTCAGACATCTTCTCAGCTACGAC.............................................................................................................................................................................................2720.50100100000000
...............................................................................................................................................................TAGTCTCTAGTTCCTTTTCCTCCAGG.....................................................................................................2660.50303000000000
......................................................................................................................................TCCTGATCAGCTTGCTTTTGTGCACTAG............................................................................................................................28100.50505000000000
...........................................................TCCTCAATCTTTTCTTCAGACATC...........................................................................................................................................................................................................2420.50101000000000
.......................................................................TCTTCAGACATCTTCTCAGCTACGAC.............................................................................................................................................................................................2620.50101000000000
.............................................................CTCAATCTTTTCTTCAGACATC...........................................................................................................................................................................................................2220.50101000000000
..................................................................................................................................................TGCTTTTGTGCACTAGTCTCTAGTTCCT................................................................................................................2860.50303000000000
..................................................................................................................................................TGCTTTTGTGCACTAGTCTCTAGT....................................................................................................................2460.50303000000000
...........................................................................CAGACATCTTCTCAGCTACGACC............................................................................................................................................................................................2320.50101000000000
..................................................................................................TCAGATACTTCTGGTTTCTGGGA.....................................................................................................................................................................23110.45501000000004
................................................................................................................................TCGACATCCTGATCAGCTTGCTTTTG....................................................................................................................................26110.45505000000000
.................................................................................................................TTCTGGGACTTCTGTTCGACATCC.....................................................................................................................................................2490.44412100000000
..........................................................................................................................................GATCAGCTTGCTTTTGTGCACTAGTCTC........................................................................................................................2890.44401300000000
...........................................................................................................TCTGGTTTCTGGGACTTCTGTTCGA..........................................................................................................................................................2570.43302100000000
...........................................................................................................TCTGGTTTCTGGGACTTCTGTTCGACA........................................................................................................................................................2770.43303000000000
..........................................................................................................TTCTGGTTTCTGGGACTTCTGTTCGA..........................................................................................................................................................2670.43303000000000
..........................................................................................................TTCTGGTTTCTGGGACTTCTGTTC............................................................................................................................................................2470.43311100000000
..................................................................TCTTTTCTTCAGACATCTTCTCAGC...................................................................................................................................................................................................2550.40202000000000
..........................................................................................................................................GATCAGCTTGCTTTTGTGCACTAGT...........................................................................................................................25100.40403100000000
....................................................................................................................TGGGACTTCTGTTCGACATCCTGATCA...............................................................................................................................................27100.40403100000000
.......................................................................................................................................CCTGATCAGCTTGCTTTTGTGCAC...............................................................................................................................24110.36404000000000
...........................................................................................TACGACCTCAGATACTTCTGGTTTC..........................................................................................................................................................................25110.36403100000000
..................................................................................................TCAGATACTTCTGGTTTCTGGGAC....................................................................................................................................................................24110.36402200000000
...........................................................................................................................................................................................................TCGGC---TTTCTCTGATTTATCT...........................................................2160.33202000000000
...................................................................................TTCTCAGCTACGACCTCAGATACT...................................................................................................................................................................................2430.33101000000000
.........................................................................................GCTACGACCTCAGATACTTCTGGT.............................................................................................................................................................................2430.33101000000000
................................................................................ATCTTCTCAGCTACGACC............................................................................................................................................................................................1830.33101000000000
...................................................................................TTCTCAGCTACGACCTCAGATACTTC.................................................................................................................................................................................2630.33100100000000
....................................................................................TCTCAGCTACGACCTCAGATACTTCTGG..............................................................................................................................................................................2830.33100000000001
................................................................................................................TTTCTGGGACTTCTGTTCGACATCCT....................................................................................................................................................2690.33302100000000
....................................................................................TCTCAGCTACGACCTCAGATACTTC.................................................................................................................................................................................2530.33101000000000
...................................................................................TTCTCAGCTACGACCTCAGATAC....................................................................................................................................................................................2330.33101000000000
..........................................................................................................................TTCTGTTCGACATCCTGATCAGCTTGCT........................................................................................................................................2890.33303000000000
.......................................................................................CAGCTACGACCTCAGATACTTC.................................................................................................................................................................................2230.33101000000000
................................................................................................................TTTCTGGGACTTCTGTTCGACATCC.....................................................................................................................................................2590.33301110000000
...........................................................................................................................................................................................................................................CTTTACTTCAGGTTTCTT.................................18100.30300000000003
.............................................................................................................................TGTTCGACATCCTGATCAGCTTGCTT.......................................................................................................................................26100.30303000000000
.....................................CTTTACTTCAGGTTTCTT.......................................................................................................................................................................................................................................18100.30300000000003
.............................................................................................................................TGTTCGACATCCTGATCAGCTTGCT........................................................................................................................................25100.30303000000000
..........................................................................................................TTCTGGTTTCTGGGACTTCTGTTCGAC.........................................................................................................................................................2770.29210100000000
...........................................................................................................TCTGGTTTCTGGGACTTCTGTTC............................................................................................................................................................2370.29200200000000
..........................................................................................................TTCTGGTTTCTGGGACTTCTGTTCGACA........................................................................................................................................................2870.29202000000000
.......................................................................................................TACTTCTGGTTTCTGGGACTTCTGTT.............................................................................................................................................................2670.29202000000000
.................................................................................................................................................................................................................................................TTCAGGTTTCTTGGGTTCCTCAATCTT..................2770.29202000000000
..................................................................................................TCAGATACTTCTGGTTTCTGGG......................................................................................................................................................................22110.27302000000001
......................................................................................................................................TCCTGATCAGCTTGCTTTTGTGCA................................................................................................................................24110.27303000000000
..................................................................................................................................GACATCCTGATCAGCTTGCTTTTGTG..................................................................................................................................26160.25404000000000
.................................................................................................................TTCTGGGACTTCTGTTCGACATC......................................................................................................................................................2390.22200200000000
.................................................................................................................TTCTGGGACTTCTGTTCGACATCCT....................................................................................................................................................2590.22201100000000
................................................................................................................................................................................................................................................................TTCCTCAATCTTTTCTTCAGATATC.....2590.22202000000000
..............................CAGTGTCCTTTACTTCAGGTTTCT........................................................................................................................................................................................................................................2490.22202000000000
....................................................................................................................................................................................................................................CAGTGTCCTTTACTTCAGGTTTCT..................................2490.22202000000000
.......................................................................................................................................CCTGATCAGCTTGCTTTTGTGCACT..............................................................................................................................25100.20202000000000
......................................................................................................................................TCCTGATCAGCTTGCTTTTGTGCACTA.............................................................................................................................27100.20202000000000
.................................................................ATCTTTTCTTCAGACATCT..........................................................................................................................................................................................................1950.20101000000000
.........................................................................................................................................TGATCAGCTTGCTTTTGTGCACTAG............................................................................................................................25100.20202000000000
...........................................................................................................................TCTGTTCGACATCCTGATCAGCT............................................................................................................................................23100.20202000000000
....................................................................TTTTCTTCAGACATCTTCTC......................................................................................................................................................................................................2050.20101000000000
................................................................AATCTTTTCTTCAGACATCTTCTCAGC...................................................................................................................................................................................................2750.20100100000000
..........................................................................................................................................GATCAGCTTGCTTTTGTGCACTAG............................................................................................................................24100.20201100000000
............................................................................................................................CTGTTCGACATCCTGATCAGCTTG..........................................................................................................................................24100.20202000000000
.................................................................ATCTTTTCTTCAGACATCTTCTCAGC...................................................................................................................................................................................................2650.20100100000000
....................................................................................................................TGGGACTTCTGTTCGACATCCTGATC................................................................................................................................................26100.20202000000000
..........................................................................................................................TTCTGTTCGACATCCTGATCAGCTT...........................................................................................................................................25100.20202000000000
.........................................................................................................................................................................................................................................TCCTTTACTTCAGGTTTCTTGGGT.............................2450.20101000000000
..........................................................................................................................TTCTGTTCGACATCCTGATCAGCTTG..........................................................................................................................................26100.20202000000000
...............................................................................................................................TTCGACATCCTGATCAGCTTGCTT.......................................................................................................................................24110.18201100000000
.....................................................................................................................................ATCCTGATCAGCTTGCTTTTGTGCAC...............................................................................................................................26110.18202000000000
...........................................................................................TACGACCTCAGATACTTCTGGTTTCT.........................................................................................................................................................................26110.18201000000001
.............................................................................................................................TGTTCGACATCCTGATCAGCTTGC.........................................................................................................................................24110.18202000000000
................................................................................................................................TCGACATCCTGATCAGCTTGCTTT......................................................................................................................................24110.18201000010000
..........................................................................................................................................................................................................TTCGGC---TTTCTCTGATTTATCC...........................................................2260.17100100000000
........................................................................................................................................................................................................................................................TTCTTGGGTTCCTCAATCTTTTCTTC............2660.17100100000000
............................................................................................................................................................................................................................................TTTACTTCAGGTTTCTTGGGTTCCTC........................2660.17101000000000
..................................................................................................................................................TGCTTTTGTGCACTAGTCTCTAGTTCCTT...............................................................................................................2960.17101000000000
...............................................................................................................................................................TAGTCTCTAGTTCCTTTTCCTCCA.......................................................................................................2460.17101000000000
...............................................................................................................................................................TAGTCTCTAGTTCCTTTTCCTCCAGGCG...................................................................................................2860.17100100000000
............................................................................................................................................................................................................................................TTTACTTCAGGTTTCTTGGGTTCCT.........................2560.17101000000000
...................................................................................................................................................GCTTTTGTGCACTAGTCTCTAGTTCC.................................................................................................................2660.17101000000000
...........................................................................................................................................................................................................................................................TTGGGTTCCTCAATCTTTTCTTCAGATA.......2860.17101000000000
.........................................................................................................................................................................................................................................................TCTTGGGTTCCTCAATCTTTTCTTCAG..........2760.17101000000000
.............................................................................................................................................................................................................................................TTACTTCAGGTTTCTTGGGTTCCTCA.......................2660.17101000000000
............................................................................................................................................................CACTAGTCTCTAGTTCCTTTTCCTCC........................................................................................................2660.17100100000000
...............................................................................................................................................................TAGTCTCTAGTTCCTTTTCCTCCAG......................................................................................................2560.17101000000000
................................................................................................................................................................AGTCTCTAGTTCCTTTTCCTCCA.......................................................................................................2360.17101000000000
......................................................................................................................................................TTTGTGCACTAGTCTCTAGTTCCTTT..............................................................................................................2660.17101000000000
...............................................................................................................................................................TAGTCTCTAGTTCCTTTTCCTCC........................................................................................................2360.17101000000000
..................................................................................................................TCTGGGACTTCTGTTCGACATCCTGA..................................................................................................................................................26120.17202000000000
..................................................................................................................................................TGCTTTTGTGCACTAGTCTCTAGTT...................................................................................................................2560.17101000000000
..................................................................................................................TCTGGGACTTCTGTTCGACATCCT....................................................................................................................................................24120.17201100000000
................................................................................................................................................................AGTCTCTAGTTCCTTTTCCTCCAGG.....................................................................................................2560.17101000000000
........................................................................................................ACTTCTGGTTTCTGGGACTTCTGT..............................................................................................................................................................24120.17202000000000
..........................................................................................................................................................TGCACTAGTCTCTAGTTCCTTTTCC...........................................................................................................2560.17101000000000
...........................................................................................................................................................................................................................................CTTTACTTCAGGTTTCTTGGGTTCC..........................2560.17101000000000
...........................................................................................................................................................................................................................................................TTGGGTTCCTCAATCTTTTCTTCAG..........2560.17101000000000
.............................................................................................................................................................................................................................................TTACTTCAGGTTTCTTGGGTTCCT.........................2460.17101000000000
.....................................................................................................................................................TTTTGTGCACTAGTCTCTAGTTCCT................................................................................................................2560.17100100000000
........................................................................................................................................................................................................................................................TTCTTGGGTTCCTCAATCTTTTC...............2370.14101000000000
.................................................................................................................................................................................................................................................TTCAGGTTTCTTGGGTTCCTCAATCC...................2670.14100100000000
............................................................................................................CTGGTTTCTGGGACTTCTGTTCGAC.........................................................................................................................................................2570.14101000000000
..................................................................................................................................................................................................................................................TCAGGTTTCTTGGGTTCCTCAATC....................2470.14100100000000
............................................................................................................................................................................................................CGGC---TTTCTCTGATTTATCT...........................................................2070.14110000000000
.......................................................................................................................................................................................................................................................TTTCTTGGGTTCCTCAATCTTTTCT..............2570.14101000000000
..................................................................................................................................................................................................................................................TCAGGTTTCTTGGGTTCCTCAATCTT..................2670.14101000000000
...................................................................................................................................................................................................................................................CAGGTTTCTTGGGTTCCTCAATC....................2370.14101000000000
..................................................................................................................................................................................................................................................TCAGGTTTCTTGGGTTCCTCAATCT...................2570.14101000000000
.................................................................................................................................................................................................................................................TTCAGGTTTCTTGGGTTCCTCAATC....................2570.14100100000000
.......................................................................................................................................................................................................................................................TTTCTTGGGTTCCTCAATCTTTTCTT.............2670.14101000000000
.................................................................................................................................CGACATCCTGATCAGCTTGCTTTTGTG..................................................................................................................................27160.13202000000000
.............................TCAGTGTCCTTTACTTCAGGTTTCC........................................................................................................................................................................................................................................2580.13100100000000
.............................TCAGTGTCCTTTACTTCAGGTTTCTT.......................................................................................................................................................................................................................................2680.13101000000000
................................................................................................................................................................................................................................................................TTCCTCAATCTTTTCTTCAGATATCT....2690.11101000000000
......................................................................................................................................................................................................................................GTGTCCTTTACTTCAGGTTTCT..................................2290.11101000000000
............................................................................................................................CTGTTCGACATCCTGATCAGCTTGCT........................................................................................................................................2690.11101000000000
..........................................................................................................................TTCTGTTCGACATCCTGATCAGCTTGCTT.......................................................................................................................................2990.11101000000000
.................................................................................................................................................................................................................................................................TCCTCAATCTTTTCTTCAGATATC.....2490.11101000000000
................................................................................................................TTTCTGGGACTTCTGTTCGACATCCTT...................................................................................................................................................2790.11101000000000
............................................................................................................................................TCAGCTTGCTTTTGTGCACTAGTCT.........................................................................................................................2590.11101000000000
.................................................................................................................TTCTGGGACTTCTGTTCGACATCCTGA..................................................................................................................................................2790.11101000000000
.............................................................................................................................................CAGCTTGCTTTTGTGCACTAGTCTC........................................................................................................................2590.11101000000000
...........................................................................................................................TCTGTTCGACATCCTGATCAGCTTGCTT.......................................................................................................................................2890.11101000000000
................................GTGTCCTTTACTTCAGGTTTCT........................................................................................................................................................................................................................................2290.11101000000000
............................................................................................................................................TCAGCTTGCTTTTGTGCACTAGTCTC........................................................................................................................2690.11101000000000
.................................................................................................................................................................................................................................................................TCCTCAATCTTTTCTTCAGATATCTT---2690.11101000000000
.........................................................................................................................................TGATCAGCTTGCTTTTGTGCACT..............................................................................................................................23100.10101000000000
.......................................................................................................................GACTTCTGTTCGACATCCTGATCAGC.............................................................................................................................................26100.10101000000000
...........................................................................................................................................ATCAGCTTGCTTTTGTGCACTAG............................................................................................................................23100.10101000000000
.......................................................................................................................................CCTGATCAGCTTGCTTTTGTGCACTAG............................................................................................................................27100.10101000000000
........................................................................................................................ACTTCTGTTCGACATCCTGATCAGCT............................................................................................................................................26100.10101000000000
..........................................................................................................................................GATCAGCTTGCTTTTGTGCACT..............................................................................................................................22100.10100100000000
..........................................................................................................................................GATCAGCTTGCTTTTGTGCACTAGTT..........................................................................................................................26100.10100100000000
...........................................................................................................................TCTGTTCGACATCCTGATCAGCC............................................................................................................................................23100.10100100000000
..........................................................................................................................................GATCAGCTTGCTTTTGTGCACTAGTA..........................................................................................................................26100.10100000000001
.....................................................................................................................................................................................................................................................................CAATCTTTTCTTCAGATATC.....20100.10101000000000
droEug1
CGAAAGCTTCACCCTTCTCTGATTTCGTTTCAGCGTCCTTTATTTCAGGCTTCTTGGGTTCTTCAATCTTTTCCTCGGAAATCTTCTCAGCGACGACCTCAGATACTTCTGGTTTCTGGGACTTTTGATCGATATCCTTATCAGCTGGCTTTTGTCCCTCAACTTCCAACTGCTTTTCCTCAAGAACTTGCTTATCGAAAGCTTCACC---CTTCTCTGATTTCGTTTCAGCGTCCTTTATTTCAGGCTTCTTGGGTTCTTCAATCTTTTCCT-------------SizeHit CountTotal NormTotal
No Reads
droBia1
CCAAAGCTTCGGCCTTCTGTGATTTGGTTTCCGTTTCTTTTATTTCCGGCTTTATCGATTCTTCGATATTTTCTTCTGATATTTTCTCAGCAACGACCTCAGTTACTTCTGGTTTTTGGGATTTCTGATCAACATCTTTGTCAGCTTGTTTTTGAGCTTCAACTTTTATTTCCTTTTCTTCCAGAATTTGCTTCTCCAAGGCTTTAGC---ATTCTTTAACTTGGTTTCAGTTTCCTTTATTTCAGGTTTTATAGATTCTTCGATGTTTTCTTCTGATATTTT---SizeHit CountTotal NormTotal
No Reads
droTak1
CCAAAGCCTCTGCCTTCTCTGATTTAGTTTCAGTATCCTTTATTTCAGGCGTCTTGGGTTCATCGATCCTTTCTTCTGAAATCTTTTCCGCAGCGACCTCTGATACTTCTGGTTTCTGGGACTTCTGTTCGACATCTTTGTCAGCTTGCTTTTGAGCTTGGACTTCCAAATGCTTTTCTTCCAAGATTTGCTTCTCCAAAGCTTCTGC---CTTCTCTGATTTAGTTTCAGTATCCTTTATTTCAGGCTTTTTGGGTTCATCGATCCTTTCTTCTGAAATCTT---SizeHit CountTotal NormTotal
No Reads
droEle1
CCAAAGCTTCAGCCTTCTCCAACTTAGTTTCAGAATCCTTTATTTCAGGCTTTTTAGGCTCTTCAATCTTTTCTTCGGATATCTTCTCTGCAACGACTTCAGATACTTCTGGCTTCTGGGATTTCTGAGCAATATCCTTGTCAGCTTGCTTTTGAGCCTCAGCTTGCAATTGTATTTCCTCTA---------------CAGCTTCAGC---CTTCTCTAACTTAGTTTCAGAATCCTTTATTTCAGGCTTGTTAGGCAGTTCAATTTTTTCTTCGGATATCTTCTGSizeHit CountTotal NormTotal
No Reads
droRho1
CCAAAGCCTCTGCCTTCTCTGATTTAGTTTCCGAATCCTTTATCTCAGGCTTCTTTGGCTCATCAATCTTTTCTTCAGTAATCTTCTCTGCAATGACTTCGGATACTTCTGGTTTCTGGGATTTCTGTTCAATATCTTTGTCAGCTGGCTTTTGTGCCCCAGCTTCCAACTGTTTTTCTTCCAGGACTTGTTTCTCCAAAGCCTCTGC---CTTCTCTGATTTAGTTTCCGAATCCTTTATCTCAGGCTTCTTGGGCTCATCAATCTTTTCTTCAGTAATCTT---SizeHit CountTotal NormTotal
No Reads
droFic1
CCAGTTCCTTGTCCTTCTCCGATTTGGCTTCTGCTTCCTTAACTTCCGGCTTCTTGGCTTCTTCAATCTTTTCTTCAGATATCTTCTCTGCAACGACTTCAGATACTTCTGGTTTCTGGGATTGAAGTTCGACATCCTTGTCGAATTGCTTTTGTGCCTCAGCTTCCAGTTGTTTTTCTTCCAGGATCTGTTTTTCCAGTTCCTTGGC---CTTCTCCGATTTGGCTTCGGTTTCCTTAACTTCCGGCTTCTTGGCTTC---------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CCAAAGCCTTTGCTTTCTTTGCCTTAGATTCAGCATCCTTTACCTCAGGCTTCTTGGCTTCTTCAACCTTTTCTTCGGAAATCTTTTCTGCAGGAACCTCAGAAACTTCTGCCTTTTCGGATTTCTTCTTAACATCTTGCTCAGCATGTTTTTGTTTCTCAGCTTCCAATTTTTGTTCTTCGATAGTTTGTTTTTCCAAAGACGTATC---AAG------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
CCAAAGCCTTGGCCTGATCGGACTTAGCTTCAGATTCCTTGACTTCCGGCTTCTTGGATTCTTCCGCCTTTTCCTCTGATATTTCCTCGGCAAGCACTTCAGATACTTCCGCCGTCTCTGATTTCTTTTCAGACGCCGATTCGGCTTGTTTCTGGGTCTTAGCATCTAATTTCTGCTCTTCCAGAGACTGCTTCTCCAAAGCCCTTGC---TTCGTCTGGTGTAGCTTCCGAGTCTTCG------------------------------------GTGATTTTGTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CCAAAGCCTTTGCTTGATC-GGTTTAGCTTCCGATTCCTTGACTTCCAATTTCTTAGATTCATCCACCTTTTCCTCAGATATTTTCTCAGCGAGGACTTCAGATACTTCGGCCTTCTCGGATTTCTTGTCAGACTCCAGTTCTCCTTGTTTTTGGGTCTTTGCATCCAACGGCTGCCCTTCCAGAGATTGTTTCTCCAAAGCTTTTGC---TTCAATCGATTCAGCTTCCGATTCATCGCCT------------------------------------TTTTTGTGSizeHit CountTotal NormTotal
No Reads
dp5
CCAACGCCATTGCTTTCTGTACCTTAGCCTTGGAATCCCTAACATCCGCTTTCTTGCTTTCTTCAACCTGTTCTTCAGATGTTTTTTCAGCAATAACCTCAGATTCTTCTGCCTTCTGGACCATCTTTTCGGCATCCTTCTCAGTTTGCTTCTGTTTTGTCTCATCCAGTTGTTTCTCCTCGAGTTCTTGCTTTTCCAGTGCCTTTCC---TTTCTGTGCCTTAGCCTCGGCAACCTT------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................TTCTGGACCATCTTTTCGGC.........................................................................................................................................................2021.0020000000200
.............................................................................................................TGCCTTCTGGACCATCTTTTC............................................................................................................................................................2120.5010100000000
droWil2
CCAAGGCCTTGGCATTTTGAGCTTCAGCTTCCGAATCCTTTACGCTAGGTTTCTGTGTCTCTTCCACTTTTTCTTCAGTTATCTTTTCGGCAACAACTTCGGAAACTTCGCCTTGTTGAGCTTTCTTCTCGGCATCTTTTTCGGCTTGCTTCTGTTTCTTCGCATCCAGTTCCTTTTGTTCCAGGGATTTCTTCTCCAAGGCCTTGGC---ATTTTGAGCTTCAGCTTTC--------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................TCGCCTTGTTGAGCTTTCTTCTCGG..........................................................................................................................................................2571.711207050
..........................................................................................................TTCGCCTTGTTGAGCTTTCTTCTCGG..........................................................................................................................................................2671.431016030
............................................................................................................CGCCTTGTTGAGCTTTCTTCTCGG..........................................................................................................................................................2470.57403010
...........................................................................................................................................TTCGGCTTGCTTCTGTTTCTTCGCA..........................................................................................................................25200.5010010000
........................................TACGCTAGGTTTCTGTGTCTCTTCCACT..........................................................................................................................................................................................................................28130.46606000
..........................................................................................................TTCGCCTTGTTGAGCTTTCTTCTCG...........................................................................................................................................................2570.43300030
.........................................................................TTCAGTTATCTTTTCGGCAACAACT............................................................................................................................................................................................25190.42808000
........................................TACGCTAGGTTTCTGTGTCTCTTCC.............................................................................................................................................................................................................................25130.38503020
....................................................................................TTTCGGCAACAACTTCGGAAACTTCGCCT.............................................................................................................................................................................29140.36541000
...............................................................................................................................................................................TTGTTCCAGGGATTTCTTCTCCAAGG.....................................................................................26200.35703040
...............................................................................TATCTTTTCGGCAACAACTTCGGAAACT...................................................................................................................................................................................28160.31523000
.......................................TTACGCTAGGTTTCTGTGTCTCTTC..............................................................................................................................................................................................................................25130.31403010
........................................TACGCTAGGTTTCTGTGTCTCTTCCAC...........................................................................................................................................................................................................................27130.31403010
..............................................................................................................................................................................TTTGTTCCAGGGATTTCTTCTCCAAG......................................................................................26200.30606000
........................................................................................................ACTTCGCCTTGTTGAGCTTTCTTC..............................................................................................................................................................2470.29201010
..................................................................................................TCGGAAACTTCGCCTTGTTGAGCTTT..................................................................................................................................................................2670.29201100
..............TTTTGAGCTTCAGCTTCCGAATCCT.......................................................................................................................................................................................................................................................25180.28504010
.....................................................................................................................................................TTCTGTTTCTTCGCATCCAGTTCCTT...............................................................................................................26180.28505000
.......................TCAGCTTCCGAATCCTTTACGCTAGGT............................................................................................................................................................................................................................................27110.27302010
.............................................TAGGTTTCTGTGTCTCTTCCACTTT........................................................................................................................................................................................................................25120.25302010
................................................................................................................................................................................TGTTCCAGGGATTTCTTCTCCAAGG.....................................................................................25200.25501040
........................................TACGCTAGGTTTCTGTGTCTCTTCCA............................................................................................................................................................................................................................26130.23301020
......................................................................TTCTTCAGTTATCTTTTCGGCAACAACT............................................................................................................................................................................................28190.21404000
.......................................................................TCTTCAGTTATCTTTTCGGCAACAACT............................................................................................................................................................................................27190.21402020
...................................TCCTTTACGCTAGGTTTCTGTGTCT..................................................................................................................................................................................................................................25150.20302010
..........................................................................................................................TTCTTCTCGGCATCTTTTTCGGCTTG..........................................................................................................................................26200.20404000
...............................................................................TATCTTTTCGGCAACAACTTCGGA.......................................................................................................................................................................................24200.20403010
...............................................................................TATCTTTTCGGCAACAACTTCGGAAAC....................................................................................................................................................................................27160.19301020
.......................TCAGCTTCCGAATCCTTTACGCTAGG.............................................................................................................................................................................................................................................26110.18202000
.................TGAGCTTCAGCTTCCGAATCCTTTACGC.................................................................................................................................................................................................................................................28170.18303000
...............TTTGAGCTTCAGCTTCCGAATCCTT......................................................................................................................................................................................................................................................25180.17302010
.................................................................................................................TGTTGAGCTTTCTTCTCGGCATCT.....................................................................................................................................................2460.17101000
.........................................................................................................................TTTCTTCTCGGCATCTTTTTCGG..............................................................................................................................................2360.17100010
.........TGGCATTTTGAGCTTCAGCTTCCGAA...........................................................................................................................................................................................................................................................26180.17302010
..........................................................................TCAGTTATCTTTTCGGCAACAACT............................................................................................................................................................................................24190.16303000
.......................................TTACGCTAGGTTTCTGTGTCTCTTCCAC...........................................................................................................................................................................................................................28130.15202000
..........................................................................................................................................................................TCCTTTTGTTCCAGGGATTTCTTC............................................................................................24200.15302010
...........................................................................................................................................TTCGGCTTGCTTCTGTTTCTTCGCAT.........................................................................................................................26200.15303000
...............................................................................................................................................................................TTGTTCCAGGGATTTCTTCTCCAAG......................................................................................25200.15300030
....................................................................................................................................................................TCCAGTTCCTTTTGTTCCAGGGATT.................................................................................................25200.15303000
..................................................................................................TCGGAAACTTCGCCTTGTTGAGCTTTC.................................................................................................................................................................2770.14101000
..........................................................................................................TTCGCCTTGTTGAGCTTTCTTCTCGGC.........................................................................................................................................................2770.14101000
...............................................................................................................CTTGTTGAGCTTTCTTCTCGG..........................................................................................................................................................2170.14100010
....................................................................................TTTCGGCAACAACTTCGGAAACTTCGCCC.............................................................................................................................................................................29140.14211000
.......................................................................................................AACTTCGCCTTGTTGAGCTTTCTTCT.............................................................................................................................................................2670.14100010
...................................................................................................CGGAAACTTCGCCTTGTTGAGCTT...................................................................................................................................................................2470.14101000
........................................................................................................ACTTCGCCTTGTTGAGCTTTCTTCT.............................................................................................................................................................2570.14101000
.....................................................................................................GAAACTTCGCCTTGTTGAGCTTTCTTC..............................................................................................................................................................2770.14101000
..................................................................................................................GTTGAGCTTTCTTCTCGG..........................................................................................................................................................1870.14101000
.................................................................................................TTCGGAAACTTCGCCTTGTTGAGCTT...................................................................................................................................................................2670.14100010
..................................................................................................TCGGAAACTTCGCCTTGTTGAGCTT...................................................................................................................................................................2570.14101000
.................................................................................................TTCGGAAACTTCGCCTTGTTGAGCTTTC.................................................................................................................................................................2870.14101000
........................................................................................................ACTTCGCCTTGTTGAGCTTTCTTCTC............................................................................................................................................................2670.14100010
.....................................................................................TTCGGCAACAACTTCGGAAACTTCGCCT.............................................................................................................................................................................28140.14202000
..................................................................................................TCGGAAACTTCGCCTTGTTGAGCTTTT.................................................................................................................................................................2770.14101000
.................................................................................................TTCGGAAACTTCGCCTTGTTGAGCTTT..................................................................................................................................................................2770.14101000
...........................................................................................................TCGCCTTGTTGAGCTTTCTTCTCG...........................................................................................................................................................2470.14100001
..........................................................................................................TTCGCCTTGTTGAGCTTTCTTCTC............................................................................................................................................................2480.13101000
...........................................................................................................TCGCCTTGTTGAGCTTTCTTCTC............................................................................................................................................................2380.13101000
............................................................................................................CGCCTTGTTGAGCTTTCTTCTC............................................................................................................................................................2280.13100010
...........................................................................CAGTTATCTTTTCGGCAACAACTTCGGA.......................................................................................................................................................................................28160.13202000
...........................................................................CAGTTATCTTTTCGGCAACAACTTCGG........................................................................................................................................................................................27160.13202000
...............................................................................TATCTTTTCGGCAACAACTTCGGAA......................................................................................................................................................................................25170.12202000
...............................................................................TATCTTTTCGGCAACAACTTCGGAAA.....................................................................................................................................................................................26170.12201010
.........TGGCATTTTGAGCTTCAGCTTCCGAAT..........................................................................................................................................................................................................................................................27180.11201010
.....................................................................................................................................................TTCTGTTTCTTCGCATCCAGTTCCT................................................................................................................25180.11202000
.........TGGCATTTTGAGCTTCAGCTTCCGA............................................................................................................................................................................................................................................................25180.11201010
..........................................................................TCAGTTATCTTTTCGGCAACAACTT...........................................................................................................................................................................................25190.11211000
...........................................................................................................................................................................CCTTTTGTTCCAGGGATTTCTTC............................................................................................23200.10202000
.............................................................................................................................................................................TTTTGTTCCAGGGATTTCTTCTCC.........................................................................................24200.10202000
...AGGCCTTGGCATTTTGAGCTTCAGCT.................................................................................................................................................................................................................................................................26200.10200020
................................................................................................................................................................................................TCTCCAAGGCCTTGGC---ATTTTGAGCTT................................................................27200.10202000
......................................................................................................................................TCTTTTTCGGCTTGCTTCTGTTTCT...............................................................................................................................25200.10202000
...........................................................................................................................TCTTCTCGGCATCTTTTTCGGCTTG..........................................................................................................................................25200.10202000
............................................................................................................................................................................................TTCTTCTCCAAGGCCTTGGC---ATTTTG.....................................................................26200.10202000
......................................................................................................................................TCTTTTTCGGCTTGCTTCTGTTTC................................................................................................................................24200.10202000
..............................................................................................................................................................................TTTGTTCCAGGGATTTCTTCTCCAA.......................................................................................25200.10200020
..............................................................................................................................................................................TTTGTTCCAGGGATTTCTTCTCCAAGG.....................................................................................27200.10202000
..................................................................................................................................................................................................TCCAAGGCCTTGGC---ATTTTGAG...................................................................22200.10202000
...............................................................................................................................................................................................TTCTCCAAGGCCTTGGC---ATTTTGAGCTT................................................................28200.10202000
................................................................................................................................................................................TGTTCCAGGGATTTCTTCTCCAAGGCC...................................................................................27200.10202000
................................................................................................................................................................................................TCTCCAAGGCCTTGGC---ATTTTGAGCT.................................................................26200.10202000
...........................................................................................................................................TTCGGCTTGCTTCTGTTTCTTCGC...........................................................................................................................24200.10201010
......................................................................................................................................................................................................AGGCCTTGGC---ATTTTGAGCTTCAGCT...........................................................26200.10200020
......................TTCAGCTTCCGAATCCTTTACGCTAGGT............................................................................................................................................................................................................................................28110.09101000
..............................................................................................AACTTCGGAAACTTCGCCTTGTTGAGC.....................................................................................................................................................................27110.09100010
.......................TCAGCTTCCGAATCCTTTACGCTAGGTT...........................................................................................................................................................................................................................................28110.09101000
......................TTCAGCTTCCGAATCCTTTACGCTAGG.............................................................................................................................................................................................................................................27110.09101000
............................TTCCGAATCCTTTACGCTAGGTT...........................................................................................................................................................................................................................................23120.08101000
............................TTCCGAATCCTTTACGCTAGGTTTCTG.......................................................................................................................................................................................................................................27120.08101000
........................CAGCTTCCGAATCCTTTACGCTAGGT............................................................................................................................................................................................................................................26120.08101000
........................CAGCTTCCGAATCCTTTACGCTAGGTT...........................................................................................................................................................................................................................................27120.08100010
............................TTCCGAATCCTTTACGCTAGGTTTC.........................................................................................................................................................................................................................................25120.08101000
.................................................................................................TTCGGAAACTTCGCCTTGTTGAGC.....................................................................................................................................................................24120.08101000
.............................................TAGGTTTCTGTGTCTCTTCCACTTTT.......................................................................................................................................................................................................................26120.08101000
........................................TACGCTAGGTTTCTGTGTCTCTTCCACTT.........................................................................................................................................................................................................................29130.08101000
...................................TCCTTTACGCTAGGTTTCTGTGTCTC.................................................................................................................................................................................................................................26130.08101000
.............................................TAGGTTTCTGTGTCTCTTCCACTT.........................................................................................................................................................................................................................24130.08101000
..............................................................................................AACTTCGGAAACTTCGCCTTGTTGA.......................................................................................................................................................................25130.08101000
.........................................ACGCTAGGTTTCTGTGTCTCTTCCA............................................................................................................................................................................................................................25130.08101000
..........................................CGCTAGGTTTCTGTGTCTCTTCCAC...........................................................................................................................................................................................................................25130.08101000
.......................................TTACGCTAGGTTTCTGTGTCTCTTCCACT..........................................................................................................................................................................................................................29130.08101000
....................................................................................TTTCGGCAACAACTTCGGAAACTTCGCC..............................................................................................................................................................................28140.07101000
..............................................................................................................................................................TTCGCATCCAGTTCCTTTTGTTCCAGGG....................................................................................................28150.07101000
...............................................................................................................................................................TCGCATCCAGTTCCTTTTGTTCCAGG.....................................................................................................26150.07101000
........................................TACGCTAGGTTTCTGTGTCTCT................................................................................................................................................................................................................................22150.07101000
...........................................................................................AACAACTTCGGAAACTTCGCCT.............................................................................................................................................................................22150.07101000
........................................TACGCTAGGTTTCTGTGTCTCTT...............................................................................................................................................................................................................................23150.07101000
...........................................................................................AACAACTTCGGAAACTTCGCCTTGT..........................................................................................................................................................................25150.07101000
...............................................................................TATCTTTTCGGCAACAACTTCGGAAACTT..................................................................................................................................................................................29160.06101000
................................................................................ATCTTTTCGGCAACAACTTCGGAAACT...................................................................................................................................................................................27160.06101000
.......................................................................................CGGCAACAACTTCGGAAACTTCGC...............................................................................................................................................................................24160.06100010
.............................................................................................................................................................CTTCGCATCCAGTTCCTTTTGTTC.........................................................................................................24160.06101000
...................................................................................................................................................GCTTCTGTTTCTTCGCATCCAGTTCC.................................................................................................................26170.06101000
...................................................TCTGTGTCTCTTCCACTTTTTCTTCAG................................................................................................................................................................................................................27170.06101000
...................................................TCTGTGTCTCTTCCACTTTTTCTTCAGT...............................................................................................................................................................................................................28170.06101000
...............TTTGAGCTTCAGCTTCCGAATCCTTT.....................................................................................................................................................................................................................................................26180.06101000
..........GGCATTTTGAGCTTCAGCTTCCGAA...........................................................................................................................................................................................................................................................25180.06101000
...............TTTGAGCTTCAGCTTCCGAATCCT.......................................................................................................................................................................................................................................................24180.06101000
........................................................GTCTCTTCCACTTTTTCTTCAGTTATCTT.........................................................................................................................................................................................................29180.06101000
........TTGGCATTTTGAGCTTCAGCTTCCGAAA..........................................................................................................................................................................................................................................................28180.06101000
........TTGGCATTTTGAGCTTCAGCTTCCGAA...........................................................................................................................................................................................................................................................27180.06101000
................TTGAGCTTCAGCTTCCGAATCCTT......................................................................................................................................................................................................................................................24180.06101000
......................................................GTGTCTCTTCCACTTTTTCTTCAGTT..............................................................................................................................................................................................................26180.06101000
.........TGGCATTTTGAGCTTCAGCTTCCG.............................................................................................................................................................................................................................................................24190.05100010
.....................................................................TTTCTTCAGTTATCTTTTCGGCAACAACT............................................................................................................................................................................................29190.05101000
...........................................................................CAGTTATCTTTTCGGCAACAAC.............................................................................................................................................................................................22190.05101000
............................................................................................................................................TCGGCTTGCTTCTGTTTCTTCGCATC........................................................................................................................26200.05101000
....................................................................TTTTCTTCAGTTATCTTTTCGGC...................................................................................................................................................................................................23200.05110000
......................................................................................................................................TCTTTTTCGGCTTGCTTCTGT...................................................................................................................................21200.05100010
...............................................................................................................................................................................TTGTTCCAGGGATTTCTTCTCCA........................................................................................23200.05101000
....................................................................................................................................CATCTTTTTCGGCTTGCTTCTGTTT.................................................................................................................................25200.05101000
....................................................................................................................................................................TCCAGTTCCTTTTGTTCCAGGGAT..................................................................................................24200.05100010
.........................................................................................................................................TTTTCGGCTTGCTTCTGTTTCTTCG............................................................................................................................25200.05101000
..........................................................................................................................TTCTTCTCGGCATCTTTTTCGGCTTGC.........................................................................................................................................27200.05100010
..................................................................................................................................................................................TTCCAGGGATTTCTTCTCCAAGGCCT..................................................................................26200.05101000
...................................................................................................................................................................................TCCAGGGATTTCTTCTCCAAGGCCTT.................................................................................26200.05101000
...............................................................................................................................................................................................TTCTCCAAGGCCTTGGC---ATTTTGAGCT.................................................................27200.05101000
................................................................................................................................................................................................TCTCCAAGGCCTTGGC---ATTTTGAGC..................................................................25200.05101000
.................................................................................................................................................................................GTTCCAGGGATTTCTTCTCCAAGGCC...................................................................................26200.05101000
............................................................................................................................................................................................TTCTTCTCCAAGGCCTTGGC---ATT........................................................................23200.05101000
.........TGGCATTTTGAGCTTCAGC..................................................................................................................................................................................................................................................................19200.05100010
..............................................................................................................................................................................TTTGTTCCAGGGATTTCTTCTCCAAGGCC...................................................................................29200.05101000
..............................................................................................................................TCTCGGCATCTTTTTCGGCTTG..........................................................................................................................................22200.05101000
....................................................................................................................................CATCTTTTTCGGCTTGCTTCTGTTTC................................................................................................................................26200.05101000
..............................................................................................................................TCTCGGCATCTTTTTCGGCTTGCT........................................................................................................................................24200.05101000
...............................................................................................................................................................................TTGTTCCAGGGATTTCTTCTCCAA.......................................................................................24200.05101000
CCAAGGCCTTGGCATTTTGAGCTTT.....................................................................................................................................................................................................................................................................25200.05101000
.....................................................................TTTCTTCAGTTATCTTTTCGGCAACAA..............................................................................................................................................................................................27200.05101000
.....................................................................................................................................................................CCAGTTCCTTTTGTTCCAGGGATTTCT..............................................................................................27200.05101000
....................................................................................................................................CATCTTTTTCGGCTTGCTTCTGTT..................................................................................................................................24200.05100010
................................................................................................................................................................................TGTTCCAGGGATTTCTTCTCCA........................................................................................22200.05100010
.................................................TTTCTGTGTCTCTTCCACTTTTTC.....................................................................................................................................................................................................................24200.05101000
......................................................................TTCTTCAGTTATCTTTTCGGCAACAA..............................................................................................................................................................................................26200.05101000
............................................................................................................................................................................................................TGGC---ATTTTGAGCTTCAGC............................................................19200.05100010
............................................................................................................................................TCGGCTTGCTTCTGTTTCTTCGCATCCA......................................................................................................................28200.05101000
..............................................................................................................................................................................TTTGTTCCAGGGATTTCTTCTCCAAT......................................................................................26200.05100010
.............................................................................................................................................CGGCTTGCTTCTGTTTCTTCGCATC........................................................................................................................25200.05100010
..........................................................................................................................................TTTCGGCTTGCTTCTGTTTCTTCGCA..........................................................................................................................26200.05101000
.........................................................................................................................................TTTTCGGCTTGCTTCTGTTTCTTCGCA..........................................................................................................................27200.05101000
............................................................................................................................................................................................TTCTTCTCCAAGGCCTTGGC---ATTTTGTCT..................................................................29200.05101000
................................................................................................................................................................CGCATCCAGTTCCTTTTGTTCCAGGG....................................................................................................26200.05101000
..............................................................................................................................................................................TTTGTTCCAGGGATTTCTTCTCCAATTA....................................................................................28200.05101000
..........................................................................................................................TTCTTCTCGGCATCTTTTTCGGCT............................................................................................................................................24200.05101000
...........................................................................................................................................TTCGGCTTGCTTCTGTTTCTTCGCATC........................................................................................................................27200.05101000
..................................................TTCTGTGTCTCTTCCACTTTTTCTT...................................................................................................................................................................................................................25200.05101000
...........................................................................................................................TCTTCTCGGCATCTTTTTCGGCTTGC.........................................................................................................................................26200.05101000
.........TGGCATTTTGAGCTTCAGCTTC...............................................................................................................................................................................................................................................................22200.05100010
............................................................................................................................................................................................TTCTTCTCCAAGGCCTTGGC---ATTTTGAGC..................................................................29200.05101000
..........................................................................................................................TTCTTCTCGGCATCTTTTTCGGCTT...........................................................................................................................................25200.05101000
.......................................................................................................................................CTTTTTCGGCTTGCTTCTGTTTCT...............................................................................................................................24200.05101000
...................................................TCTGTGTCTCTTCCACTTTTTCTT...................................................................................................................................................................................................................24200.05101000
...................................................................................................................................................................................................CCAAGGCCTTGGC---ATTTTGAGCTTT...............................................................25200.05101000
.............................................................................................................................................................................TTTTGTTCCAGGGATTTCTTCTC..........................................................................................23200.05100010
....................................................................................................................................................................TCCAGTTCCTTTTGTTCCAGGGATTTC...............................................................................................27200.05101000
...................................................................................................................................................................ATCCAGTTCCTTTTGTTCC........................................................................................................19200.05100010
............................................................................................................................................TCGGCTTGCTTCTGTTTCTTCGCAT.........................................................................................................................25200.05101000
......................................................................................................................................TCTTTTTCGGCTTGCTTCTGTTTCTTT.............................................................................................................................27200.05101000
......................................................................................................................................TCTTTTTCGGCTTGCTTCTGTTTCTTC.............................................................................................................................27200.05101000
.............................................................TTCCACTTTTTCTTCAGTTATCTTT........................................................................................................................................................................................................25200.05101000
..................................................................................................................................................TGCTTCTGTTTCTTCGCATCCAGTT...................................................................................................................25200.05101000
................................................................................................................................................................................TGTTCCAGGGATTTCTTCTCCAAG......................................................................................24200.05101000
.............................................................................................................................................................................TTTTGTTCCAGGGATTTCTTCTCCAA.......................................................................................26200.05101000
................................................................................................................................................CTTGCTTCTGTTTCTTCGCATCCAGTT...................................................................................................................27200.05101000
..............................................................................................................................................................................TTTGTTCCAGGGATTTCTTCTCCA........................................................................................24200.05101000
droVir3
CTAGTACCTTCGCCTTTTGGTCTTCACTTTCAGATTCCTTTACTTCAAGCTTCTTACTCTCAGGAACCTTTTCTTTGGAAACCTTCTCTGCAACGACTTCAGATACTTCTCCTTTCTGGGCTCTCTTTTCAGCATCCTTCTCGGCTTGTTTCTTCTGTTTGGCATCCAGTTTCTTCTCTTCAATTAGTTGTTGTTCTAGTACCTTCGC---CTTTTGGGCTTCACTTTCAGATTCCCCTACTTCAAGCTTCTTACT------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................TTCTTCTCTTCAATTAGTTGTTGTTC..........................................................................................26190.051000001000000000000000000000000000000000000000000000000000000000
.............................................................................GAAACCTTCTCTGCAACGACT............................................................................................................................................................................................21200.051000000000000000000000000000000100000000000000000000000000000000
droMoj3
CAAGTACCTTTGCCTTTTGAGACTCTGCTTCCGATTCCTTAGTTTCGGGTTTCTTACTCTCGGGGACTTTCTCTTCCGATACTTTCTCAGCGATGACTTCAGATACTTCTCCCTTTTGGGCTTTCGCTTCAGCTTCCTTTTGAGCTGGTTTTTCCGGTTTTGCATCCAGTTTTTGCTCTTCGGCTGATTCTTTTTCAAGTACCTTTGC---CTTTTGAGACTCTGCTTCCGATTCCTTAACCACGGGTTTCATACTCTC---------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CCAGAATCTTTGCCTTTTGAGCTTCAGCTTCAGATTCCTTGACACCTGGCTTCTTGCTTTCTGGAGTCTTTTCTTCAGATACTTTCTCGGCAACAACTTCAGATACTTCTCCCTTCTGGGCCTTCTGTTCAGCATCCTTTTCTGCTTGTTTGTTTTTCTTCGTCTCCAGTTTTTGCTCATCGATAGATTGTCTCTCAAATGGCACTTCTTCTTTGTTGGCCTCTCCTTCAGTCGAATCCTTTTTGAGCAACT---------------------GTAATTGT---TCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 02:47 PM