ID:dsi_2526 |
Coordinate:3l:11669036-11669112 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3l_11668770_11669035_+]; CDS [3l_11668770_11669035_+]; CDS [3l_11669113_11670939_+]; exon [3l_11669113_11670939_+]; intron [3l_11669036_11669112_+]
No Repeatable elements found
| ##################################################-----------------------------------------------------------------------------################################################## TCGCAGGACGAAGTCTCTGTAAGCTGAGTCTTCTAGCTCCACTCGCTGAGGTAGGTCCAAGATTGGCTTTAGAGTTTGATAAAGTCCCATTCAACGCAATCCCTAACTTCTATCCGAACTTCTGTAGGCCACCAATGTGTGCTCCACCGAGGTGAACGGAGCGTACATAGCCAATAG **************************************************............((.((....(((((((((((((......................))).)))).))))))..))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM343915 embryo |
M025 embryo |
SRR553488 RT_0-2 hours eggs |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................GGGGAACGGAGCGTACAGAGGCA.... | 23 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...........................GTCTTCTAGCTCCACTCGCTGA................................................................................................................................ | 22 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| .........................................................................................................................................................GAACGGAGCGTACATAGCC..... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .........................................................................................................................................................GAACGGAGCGTACATAGC...... | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ......................................................................................................................................................GGTGAACGGAGCGTACATAGCC..... | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .....GGACGAAGTCTCTGTAAGCTGAGG.................................................................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| .......................................................................................................................................................GTGAACGGAGCGTACATAGCC..... | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| .............................CTTCTAGCTCCACTCGCTGA................................................................................................................................ | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ....AGGACGAAGTCTCTGTAAGCTGA...................................................................................................................................................... | 23 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ...........................GTCTTCTAGCTCCACTCGCTGG................................................................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| .....................................TCCACTCGGTGCGGTCGGTCCA...................................................................................................................... | 22 | 3 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 |
| ..................................................................CTTTAGAGTTTGATC................................................................................................ | 15 | 1 | 10 | 0.10 | 1 | 0 | 0 | 1 | 0 |
| ......................................................................AGAGTTTGATCATGTCTCA........................................................................................ | 19 | 3 | 18 | 0.06 | 1 | 0 | 0 | 0 | 1 |
| .................................................................ACTTTAGAGTTTGAT................................................................................................. | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 |
| ............................................................TATAGGGTTTAGAGTTTGA.................................................................................................. | 19 | 3 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 |
|
AGCGTCCTGCTTCAGAGACATTCGACTCAGAAGATCGAGGTGAGCGACTCCATCCAGGTTCTAACCGAAATCTCAAACTATTTCAGGGTAAGTTGCGTTAGGGATTGAAGATAGGCTTGAAGACATCCGGTGGTTACACACGAGGTGGCTCCACTTGCCTCGCATGTATCGGTTATC
**************************************************............((.((....(((((((((((((......................))).)))).))))))..))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553485 Chicharo_3 day-old ovaries |
SRR902009 testis |
M024 male body |
SRR1275483 Male prepupae |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................CAAGGTGGCTCTACTTG.................... | 17 | 2 | 8 | 0.63 | 5 | 0 | 4 | 0 | 1 | 0 |
| ..............................................................................................................................................AGGTGGCTCTACTTG.................... | 15 | 1 | 11 | 0.45 | 5 | 5 | 0 | 0 | 0 | 0 |
| ...........TCAGGCACATTCGATTCAG................................................................................................................................................... | 19 | 3 | 4 | 0.25 | 1 | 0 | 0 | 1 | 0 | 0 |
| ..............................................................................................................ATAAGCTTGAAGACAT................................................... | 16 | 1 | 9 | 0.11 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........................................................................................................................................TCACTAGGTGGCTCCTCTT..................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
Generated: 04/24/2015 at 10:34 AM