ID:dsi_25250 |
Coordinate:3l:8058441-8058590 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
intergenic
No Repeatable elements found
|
CAATGATGCGTACAAAAGCTACACATGCCGCACTGTAAATAGACTGACAGGTACGTGATAATCGCATTTCCAGCTTAATCGTCCATCTGGGCGATGCATGAGTTGCTCCCGAATCCGGGGACTTTGGACACTGGACTCCGTGCGCCGGGACTCCGGATCCGTGCCGGATTCGTCCGGATTGTTGGCTCAGTTGGCGGGGCAGCTATAATTAAGTTGTATAAATAACCAATGAGGGACATTTTGAAGGGCG
**************************************************....((((...)))).....((((((((((((((....)))))))...)))))))(((((((((((((......((((..(((((.(((........))).))))).))))..))))))))).(((.((((......))))))).)))).************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M023 head |
SRR902009 testis |
M024 male body |
SRR553486 Makindu_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
GSM343915 embryo |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................ATGCCGCACTGTAAATAGACTG............................................................................................................................................................................................................ | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................................................CACGCGAATCCGGGGACTTT............................................................................................................................. | 20 | 2 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................................................ATTCTTAAGGATTGTTGGCTC.............................................................. | 21 | 3 | 3 | 0.33 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................................................................................................................................GTCCCGACTATTGGCTCAGT........................................................... | 20 | 3 | 4 | 0.25 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................................................................................................................................................................................CTCAGTTGGCAGGGCATC............................................... | 18 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................CTGTATATAGCCTGACA......................................................................................................................................................................................................... | 17 | 2 | 9 | 0.11 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ........................................................................................................................................................................................GCTCAGTTGGAGGGG................................................... | 15 | 1 | 12 | 0.08 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .......................................................................................................................................................................................................................................AGGGACGTTTTGAAGAGTG | 19 | 3 | 13 | 0.08 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| ...................................................................................................................................................................................TGTTAGCTCAGTTGG........................................................ | 15 | 1 | 19 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................................................................................................................................GGAGTGTTAGTTCAGTTGG........................................................ | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ..................................................................................................................................................................GCTGCATTCGTCCGG......................................................................... | 15 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..ATGATTCGTACAAAA......................................................................................................................................................................................................................................... | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
|
GTTACTACGCATGTTTTCGATGTGTACGGCGTGACATTTATCTGACTGTCCATGCACTATTAGCGTAAAGGTCGAATTAGCAGGTAGACCCGCTACGTACTCAACGAGGGCTTAGGCCCCTGAAACCTGTGACCTGAGGCACGCGGCCCTGAGGCCTAGGCACGGCCTAAGCAGGCCTAACAACCGAGTCAACCGCCCCGTCGATATTAATTCAACATATTTATTGGTTACTCCCTGTAAAACTTCCCGC
**************************************************....((((...)))).....((((((((((((((....)))))))...)))))))(((((((((((((......((((..(((((.(((........))).))))).))))..))))))))).(((.((((......))))))).)))).************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
SRR902009 testis |
|---|---|---|---|---|---|---|---|
| ..........................................................................................................AGGGCTCAGGCCTCTGAAAC............................................................................................................................ | 20 | 2 | 1 | 1.00 | 1 | 1 | 0 |
| ..........................................................................................................AGGGCTCAGGCCTCTGAAACG........................................................................................................................... | 21 | 3 | 4 | 0.50 | 2 | 2 | 0 |
| ......................................................................................................................................................................CTAAGCAGGCCTGACAT................................................................... | 17 | 2 | 2 | 0.50 | 1 | 0 | 1 |
| ..............TTTCGGTGGGTACGGCGT.......................................................................................................................................................................................................................... | 18 | 2 | 3 | 0.33 | 1 | 0 | 1 |
| .......................................................................................................GCGAGGGCTCAGGCCTCTGA............................................................................................................................... | 20 | 3 | 5 | 0.20 | 1 | 1 | 0 |
| ..........................................................................................................AGGGCTCAGGCCTCTGA............................................................................................................................... | 17 | 2 | 18 | 0.06 | 1 | 1 | 0 |
Generated: 04/24/2015 at 10:37 AM