ID:

dsi_2523

 Coordinate:

2r:3183074-3183223 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.9 -23.1 -23.0

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron-
DNAREP1_DYakRCHelitron-
mature
star
  1. dsi_2523  2r:3183203-3183217 -
  2. node_42816:5531-5545 +

Sense Strand Reads

AGATTCGTTGAAAAGTATGTAGCAGGCAGAAGAAAGCGTTTCCATATAAGGTAAACATTCTTGATCGTGATCAATGTTTTGATTTTTCTTCGTTTTATTGCTGGTCTTGCCAATTTCGATCGGTATTGGCCACGGGTGGAGGGGCGTGGGACACCTACAAAACGCTAAAACGGTCACGCCCACACTCTTGATAAATTGTTAAATATTTTCTCATATTATTTATCTTTATCCCAGATATCCTACAGCATTC
********************************************************............................((.((.((((((.(((((.((...((((((.((....)).)))))).)).))))).)))))).))))*************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M053
female body
 O002
Head
 M023
head
 GSM343915
embryo
...TTCGTTGAAAAGTATGTAGCAGGC............................................................................................................................................................................................................................... 24 0 3 46.67 140 47 29 8 25 17 2 9 3 0 0 0
...TTCGTTGAAAAGTATGTAGCAGGCA.............................................................................................................................................................................................................................. 25 0 3 21.00 63 51 0 5 2 2 1 1 1 0 0 0
...TTCGTTGAAAAGTATGTAGCAGGCAG............................................................................................................................................................................................................................. 26 0 3 14.00 42 32 3 3 1 1 1 0 1 0 0 0
....TCGTTGAAAAGTATGTAGCAGGCA.............................................................................................................................................................................................................................. 24 0 3 13.00 39 32 1 4 1 0 0 0 1 0 0 0
....TCGTTGAAAAGTATGTAGCAGGCAG............................................................................................................................................................................................................................. 25 0 3 8.33 25 25 0 0 0 0 0 0 0 0 0 0
...TTCGTTGAAAAGTATGTAGCAGG................................................................................................................................................................................................................................ 23 0 4 5.00 20 0 1 1 2 4 3 6 3 0 0 0
....TCGTTGAAAAGTATGTAGCAGGC............................................................................................................................................................................................................................... 23 0 3 3.67 11 8 1 2 0 0 0 0 0 0 0 0
..........AAAAGTATGTAGCAGGCAGTAGAA........................................................................................................................................................................................................................ 24 1 2 3.50 7 7 0 0 0 0 0 0 0 0 0 0
..........AAAAGTATGTAGCAGGCAGTAGAAA....................................................................................................................................................................................................................... 25 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
..........AAAAGTATGTAGCAGGCAGTAGAT........................................................................................................................................................................................................................ 24 2 2 2.50 5 5 0 0 0 0 0 0 0 0 0 0
..........AAAAGTATGTAGCAGGCAGTAGATA....................................................................................................................................................................................................................... 25 2 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0
..........AAAAGTATGTAGCAGGCAGTAGA......................................................................................................................................................................................................................... 23 1 2 2.00 4 3 0 1 0 0 0 0 0 0 0 0
....TCGTTGAAAAGTATGTAGCAGG................................................................................................................................................................................................................................ 22 0 4 2.00 8 5 1 1 0 0 0 0 0 0 1 0
...............TATGTAGCAGGCAGAAGAAAGCGT................................................................................................................................................................................................................... 24 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0
........................GGCAGAAGAAAGCGTT.................................................................................................................................................................................................................. 16 0 20 1.30 26 0 0 0 0 0 26 0 0 0 0 0
...TTCGTTGAAAAGTATGTAGCAGGCAT............................................................................................................................................................................................................................. 26 1 4 1.25 5 3 0 0 0 0 0 2 0 0 0 0
...TTCGTTGAAAAGTATGTAGCAG................................................................................................................................................................................................................................. 22 0 5 1.20 6 0 0 2 2 1 0 0 1 0 0 0
....................................................................................................................................CGGGTGGAGGGGCGTGGGA................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...TTCGTTGAAAAGTATGTAGCAGGCAGA............................................................................................................................................................................................................................ 27 0 2 1.00 2 1 0 0 0 0 0 1 0 0 0 0
....TCGTTGAAAAGTATGTAGCAGGCAT............................................................................................................................................................................................................................. 25 1 4 1.00 4 4 0 0 0 0 0 0 0 0 0 0
.......................AGGCAGAAGAAAGCGTT.................................................................................................................................................................................................................. 17 0 20 0.90 18 0 0 0 0 0 18 0 0 0 0 0
...TTCGTTGAAAAGTATGTAGCAGGCAC............................................................................................................................................................................................................................. 26 1 4 0.75 3 2 0 1 0 0 0 0 0 0 0 0
...........AAAGTATGTAGCAGGCAGA............................................................................................................................................................................................................................ 19 0 3 0.67 2 0 0 0 0 0 0 0 0 2 0 0
...........................................................................................................................................................................................................TATTTTCCCACATTTTTTATCTTT....................... 24 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0
........................................................ATTCTTGATCGTGAT................................................................................................................................................................................... 15 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
...TCCGTTGAAAAGTATGTAGCAGGCA.............................................................................................................................................................................................................................. 25 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
...TTCGTTGAAAAGTATGTAGCA.................................................................................................................................................................................................................................. 21 0 6 0.33 2 0 0 0 1 1 0 0 0 0 0 0
...TTCGTTGAAAAGTATGTAGCAGGCT.............................................................................................................................................................................................................................. 25 1 15 0.33 5 5 0 0 0 0 0 0 0 0 0 0
...TTCGTTGAAAAGTATGTAGCAGGCAA............................................................................................................................................................................................................................. 26 1 15 0.33 5 2 0 2 0 0 0 1 0 0 0 0
..........AAAAGTATGTAGCAGGC............................................................................................................................................................................................................................... 17 0 6 0.33 2 0 0 0 0 0 2 0 0 0 0 0
...TTCGTTGAAAAGTATGTAGCAGGT............................................................................................................................................................................................................................... 24 1 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0
...TTCGTTGAAAAGTATATAGCAGGC............................................................................................................................................................................................................................... 24 1 8 0.25 2 0 0 0 2 0 0 0 0 0 0 0
...TTCGTTGAAAAGTAAGTAGCAGGC............................................................................................................................................................................................................................... 24 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
....TCGTTGAAAAGTATGTAGCAGGCAA............................................................................................................................................................................................................................. 25 1 15 0.20 3 3 0 0 0 0 0 0 0 0 0 0
...TTCGTTGAAAAGAATGTAGCAGGCA.............................................................................................................................................................................................................................. 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
..............GTATGTAGCAGGCAGAA........................................................................................................................................................................................................................... 17 0 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0
...TTCGTTGAAAAGAATGTAGCAGGCAG............................................................................................................................................................................................................................. 26 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
......................CAGGCAGAAGAAAGCGT................................................................................................................................................................................................................... 17 0 20 0.15 3 0 0 0 0 0 3 0 0 0 0 0
...TTCGTTGAAAAGTATGTAGCAGGTA.............................................................................................................................................................................................................................. 25 1 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
........................GGCAGAAGAAAGCGTTTC................................................................................................................................................................................................................ 18 0 20 0.15 3 0 0 0 0 0 3 0 0 0 0 0
...TTCGTTGAAAAGTATGTAGCAGGCTA............................................................................................................................................................................................................................. 26 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
...TTCGTTGAAAAGTATGTAGCAGGCG.............................................................................................................................................................................................................................. 25 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0
...TTCGTTGAAAAGTATTTAGCAGGCA.............................................................................................................................................................................................................................. 25 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0
..........AAAAATATGTAGCAGGCAGA............................................................................................................................................................................................................................ 20 1 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0
.................TGTAGCAGGATGAGGAAAGCGT................................................................................................................................................................................................................... 22 3 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0
...TACGTTGAAAAGTATGTAGCAGGC............................................................................................................................................................................................................................... 24 1 9 0.11 1 0 0 0 0 0 1 0 0 0 0 0
...TTTGTTGAAAAGTATGTAGCAGGC............................................................................................................................................................................................................................... 24 1 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0
....TCATTGAAAAGTATGTAGCAGGCAG............................................................................................................................................................................................................................. 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0
....TCGTTGAAAAGTATGTAGAAGGCA.............................................................................................................................................................................................................................. 24 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0
...TTCGTTGAAAAGTATGTAGCATGCAG............................................................................................................................................................................................................................. 26 1 11 0.09 1 0 0 0 0 0 0 1 0 0 0 0
...TTCGTTGAAAAGTGTGTGGCAGGCA.............................................................................................................................................................................................................................. 25 2 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TATCCCAGCTAGCCTTCAG..... 19 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 1
....................................................................TATAAATGTTTTGATTTTTCTTCGTT............................................................................................................................................................ 26 2 12 0.08 1 0 0 0 0 1 0 0 0 0 0 0
ATGTTCGTTGAAAAGTATGTAGCAGGC............................................................................................................................................................................................................................... 27 2 14 0.07 1 0 0 0 0 0 1 0 0 0 0 0
...TTCGTTGAAAAGTATGTAGCAGGA............................................................................................................................................................................................................................... 24 1 14 0.07 1 0 0 1 0 0 0 0 0 0 0 0
...TTCGTTGAAAAGTATGTAGCAGGAA.............................................................................................................................................................................................................................. 25 1 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0
..........AAAAGTATGTAGCAG................................................................................................................................................................................................................................. 15 0 15 0.07 1 0 0 0 0 0 1 0 0 0 0 0
..........AAAAGTATGTAGCAGGCAGTAGTAAA...................................................................................................................................................................................................................... 26 3 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0
....TCGTTGAAAAGTATGTAGCAAACAGA............................................................................................................................................................................................................................ 26 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
..........................CAGAAGAAAGCGTTT................................................................................................................................................................................................................. 15 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
.......................AGGCAGAAGAAAGCGTTTC................................................................................................................................................................................................................ 19 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
.......................AGGCAGAAGAAAGCGTTT................................................................................................................................................................................................................. 18 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
.........................GCAGAAGAAAGCGTTTC................................................................................................................................................................................................................ 17 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
.......................ACGCAGAAGAAAGCGTTTC................................................................................................................................................................................................................ 19 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

TCTAAGCAACTTTTCATACATCGTCCGTCTTCTTTCGCAAAGGTATATTCCATTTGTAAGAACTAGCACTAGTTACAAAACTAAAAAGAAGCAAAATAACGACCAGAACGGTTAAAGCTAGCCATAACCGGTGCCCACCTCCCCGCACCCTGTGGATGTTTTGCGATTTTGCCAGTGCGGGTGTGAGAACTATTTAACAATTTATAAAAGAGTATAATAAATAGAAATAGGGTCTATAGGATGTCGTAAG
***************************************************************************************************............................((.((.((((((.(((((.((...((((((.((....)).)))))).)).))))).)))))).))))******************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M024
male body
..................................................................................................ACGACCAGAACGGTTAAAGCTAGCCAT............................................................................................................................. 27 0 1 2.00 2 2 0 0 0 0
...............................................TTCCATATGTAAGAACTAGCACTAGT................................................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................................................................................AGAAATAGGGTCTATAGGATGTCGTAA. 27 0 1 1.00 1 0 0 0 1 0
........................................................................................................................................................................TTGCCATTGCGGGTGTGAGAACTATTT....................................................... 27 1 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................TTAACAATTTATAAAAGAGTATAAT................................ 25 0 1 1.00 1 0 0 1 0 0
..............................................................................................................................................................................................................................AGAAATAGGGTCTATAGGATGTCGT... 25 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................................................................................................................AAGAAATAGGGTCTATAGGATGTCGT... 26 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................TTGTGGATGTTTTGCGATTTTGCCA............................................................................ 25 1 1 1.00 1 0 0 1 0 0
.................................................................................................................................................................................................................................AATAGGGTCTATAGGATGTCGT... 22 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................AAATAGAAATAGGGTCTATAGGATGT...... 26 0 1 1.00 1 1 0 0 0 0
.................................................................................................................AAAGCTAGCCATAACCGGTGCCCACCT.............................................................................................................. 27 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................................................................................................TAAAATAGAAATAGGGTCTATAGGATGT...... 28 2 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................TTGCCAGTGCGGGTGTGAGAACTATTT....................................................... 27 0 1 1.00 1 1 0 0 0 0
...............................................................................................................TTAAAGCTAGCCATAACCGGTGCCCAC................................................................................................................ 27 0 1 1.00 1 0 0 0 1 0
..........................................................................................................................................CTCCCCGAACCCTGTG................................................................................................ 16 1 2 0.50 1 0 0 1 0 0
........................................................................................................................................................................................................................................TCAATAGGATGTCGTAGG 18 2 3 0.33 1 0 0 1 0 0
........................................................................TTACAAAACTAAAAAGAAGCAAAAT......................................................................................................................................................... 25 0 3 0.33 1 0 1 0 0 0
........................................................................TTACAAAACTAAAAAGAAGCAAA........................................................................................................................................................... 23 0 6 0.17 1 0 0 1 0 0
.........................................................................TACAAAACTATAAAGAAGCAAAAT......................................................................................................................................................... 24 1 7 0.14 1 0 1 0 0 0
....................................................................................................................................................................................................................................AGGGTCAATAAGATGTGGTA.. 20 3 8 0.13 1 0 0 0 0 1
...AAGCAACTTTTTATACATCGT.................................................................................................................................................................................................................................. 21 1 18 0.06 1 0 0 0 1 0
..............................................................................................................................................................................................AAATTAATAATTTATAAAAGAGT..................................... 23 3 19 0.05 1 0 1 0 0 0
................................................................................CTAAAAAGAAGCAAAAT......................................................................................................................................................... 17 0 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:3183024-3183273 - dsi_2523 AGA---------------------TTCGTTGAAAAGTATGTAGCAGGCAGAAGAAAGCGTTTCC----ATATAAGGTAA--ACATTCTTGATCGTGATCAATGTTTTGA----------------TTTTTCT-------TCG----TTTTAT---------TG-CTGGTCTTGCCAATTTCGATCGGTATTGGCCACGGGTGGAGGGGCGTGGGA---CACCTACA-------------------------------------AAACGCT-AA------AACG-----------------------------GTCACGCCCACACTCTTGATAAATTGTTAAATATTT--TCTCATATTATTTA-TCTTTATCCCAG-ATA------------------T-----------------CCTACAGCAT--TC
droSec2 scaffold_109:26850-27099 - AGA---------------------TTCGTTGAAAAGTATGTAGCAGGCAGAAGAAATCGTTTCC----ATATAAGGTAT--ACATTCTTGATCATGATCAATGTTTTGA----------------TTTTTCT-------TCG----TTTTAT---------TG-CTGGTCTTGCCAATTTCAATCGGTATTGGCCACGGGTGGAGGGGCGTGGGA---CACCTACA-------------------------------------AAACGCT-AA------AACG-----------------------------GTCACGCCCACACTCTTGATAAATTTTTAAATATTT--TCTCATATTATTTA-TCTTTATCCCAG-ATA------------------T-----------------CCTACAGCAT--TC
dm3 chrXHet:69744-69997 + AGA---------------------TTCGTTAAAAAGTATGTAACAGGCAGATGGAAGAGTGTCCGACTATATAAAGTATATATATTCTTGATCAGGATCAATAGCCGAGTCGATCT-AGCCATGT---CCGTCTG----------------------------TCCGT----TTTAACGTCGAGA-----------------------TCTCAGGAAC----TA------------------------------------------------G------AATGTTAAGATAAACCATACTGATTCTAGAGACATCACGCCCACACTTTCGATACATTTTTAAATATTT--TCTCATAATATCTA-TCGATATCCCAG-ATA------------------T-----------------CCTACAGCATTTTC
droEre2 scaffold_4770:369223-369478 + AGA---------------------TTCGTTAAAAAGTATGTAACAGGTAGAAGGGAGCGTTTCCGACTATATAAAGTAT--ATATTCTTGGTCAGGATCAATAGGCGAGTTGATCT-GGCCATGT---CCGTCCGATTGC-TAAA--------------------------------TTTCTA------------ACGAGTAGAAAATCTT-------------------------TTTTCCACGCCCACTCTAACGCCCACAAGCCGCACAAACTT-----------------------------------GTCACGCCCACACTTTTAAAA-ATTTAAAAATTTCT--TTTCATATTATTCTTTTTTTACCCCAA-ATA-------------------------------------CTACCGATT--TT
droYak3 2L:19113293-19113532 - AGA---------------------TTCGTTGAAAAGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAAGTATATATATTCTTGATCAGGATCAATAGCCGAGTCGATCT-GGC---------------------AAAA--------------------------------TTTCTATCGATT---------------------------------TGCAAAAAAAACTTTTTGCCACGCCCACTCTAACGCCCTCAAACCGCCCAAAGCT-----------------------------------GCCACGCCCACACTATTGAAAAATGTTTTGATATTT--TTTCATTTT-TGTA-TTAGTCTTCTAA-ATT------------------T-----------------CCCACA--------
droEug1 scf7180000407702:23239-23469 - AGA---------------------TTCGCTGAAAAGTATGTAACAGGTAGAAGGAAGCGTTTTCGACCCTATAATAT--ATTTATTCATGATCAGGATCAATAACGAAGTCGATTG-AGCCATGATTTCCCT-------TAA----CGCTAT-----CCTTTGTTAGT----CCAAAGTTCGAGATGAAGTGGCTCC--------------TGAA---AGCCGACA-------------------------------------AAACACATGCCAT------------------------------------TACATGGTCATACTTGTGCAGACTTGTGGAATGTCT--GCCCATGTCACATG-CCT---------------------------------------------------------------
droBia1 scf7180000301518:314964-315214 + AGG---------------------CTCGTCGGAAAGTATTTAACAGATAGGAGAAAGCGATTCTGACACTATAAAGTAA--ATATCCTTGGTCAGG-TCAA------------TGT-AGCAATGT---CCATCC-------AAAATTTTAAC---------TG-ATTTTCTCATCAACTCCTATCAATAG-----------------------------ACCTACAAAAA------TTTGCCACGCCCACTCTAATGCCCACAAACCGGCCAAAACTGAAAGGGCCAGTTTTCT------------------TGC---------TTTGAAATTGTTTGTCAAAAATTT--ATTTGTGTCATCAA-TATCTATC----------------------------------------------------------
droTak1 scf7180000414381:15983-16214 - AGA---------------------TTCGTGCAAAAGTATGTAACAGATAGAAGGAAGCGTTTCCGACCCTATAAACTATATATATTCTTGATCAGGATCACTAGCCGAGTCGATCTAAGCCATGT---CCGTCTGTCCGTCA----GTCTGTCCGTCTG----TCTGTCTGTATGAACGCTGAGA-----------------------TCTCGGAAAC----TACA-------------------------------------AAA-GCT-AG------AAGGTTCAGATTTCC----------------------------CACTCATATTTATTTATTATTTATTT--ATTTAT-TTATTTA-TTT---------------------------------------------------------------
droEle1 scf7180000491271:8508-8658 - AGG------------TATATTGATTTCGTTGAAAAGTATGCAACAGGAAAAAGGAAGCGTTTTCGACCCTATAAAGTAT--ATATTCTTGATAAGGATCAATAGCCGTGTCGATCT-AGCCATGT---CCGTTTG----------------------------TCTGTCCTTATAAACGTCAATC----TTGGCCAGAGA--------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000769120:788-1084 + CGTAGAGTAAAAGGGTATATTGTATTCGTGCATAAGTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATATTGTTGTTCAGGATCACTAGCCGAGTCGATCT-AGCCATGT---CCGTCTGTCCGT----------------CTG----TCTGTCCGTATGAACGCTGAGA-----------------------TCTCGGAAAC----TATA-------------------------------------AAA-GCT-AG------AG--------------------------------CTGTGGCCACAGTTTTGATACTATTATGAAAATTTTAATTGATA---TATA-TTTGTTTCGTCAATACCTATCGATTGGCCTAATCTAATAGTTGAGGCACTTGACTATAGCGT--TC
droFic1 scf7180000453926:297983-298006 + ATA---------------------TTTTTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTAAAAGTAT--AT-------------------------------------------------------------------------------
droBip1 scf7180000396710:156237-156317 + ATA-------------------ATTTTGTCCAAAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004909:1483930-1484019 - AAA---------------------A-CGTTAAAATGTATGTAACAGGCAGAATAAATCGTTTTCAGCCTTATAAAATATATATTTTCTTGATCATCATCAACAGCCTAATCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_1765:157-233 + GGT---------------------TTTGT-GAAAAGTATGTAACAGGCAGATGGAATCATCGCAGACCCCATAAAGTATATATATTCTTGATCAGGACC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGA---------------------TTCGTTGAAAAGTATGTAGCAGGCAGAAGAAAGCGTTTCC----ATATAAGGTAA--ACATTCTTGATCGTGATCAATGTTTTGA----------------TTTTTCT-------TCG----TTTTAT---------TG-CTGGTCTTGCCAATTTCGATCGGTATTGGCCACGGGTGGAGGGGCGTGGGA---CACCTACA-------------------------------------AAACGCT-AA------AACG-----------------------------GTCACGCCCACACTCTTGATAAATTGTTAAATATTT--TCTCATATTATTTA-TCTTTATCCCAG-ATA------------------T-----------------CCTACAGCAT--TCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................TTCGTTGAAAAGTATGTAGCAGGC...............................................................................................................................................................................................................................................................................................................................................................................................24346.67140000300172925920478000
........................TTCGTTGAAAAGTATGTAGCAGGCA..............................................................................................................................................................................................................................................................................................................................................................................................25321.0063000100202110515000
........................TTCGTTGAAAAGTATGTAGCAGGCAG.............................................................................................................................................................................................................................................................................................................................................................................................26314.0042000100131010323000
.........................TCGTTGAAAAGTATGTAGCAGGCA..............................................................................................................................................................................................................................................................................................................................................................................................24313.0039000100011000324000
.........................TCGTTGAAAAGTATGTAGCAGGCAG.............................................................................................................................................................................................................................................................................................................................................................................................2538.3325000000000000250000
........................TTCGTTGAAAAGTATGTAGCAGG................................................................................................................................................................................................................................................................................................................................................................................................2345.002000030041263001000
.........................TCGTTGAAAAGTATGTAGCAGGC...............................................................................................................................................................................................................................................................................................................................................................................................2333.671100000001000082000
.........................TCGTTGAAAAGTATGTAGCAGG................................................................................................................................................................................................................................................................................................................................................................................................2242.00810000001000051000
....................................TATGTAGCAGGCAGAAGAAAGCGT...................................................................................................................................................................................................................................................................................................................................................................................2412.00200000000002000000
.............................................GGCAGAAGAAAGCGTT..................................................................................................................................................................................................................................................................................................................................................................................16201.3026000000000026000000
........................TTCGTTGAAAAGTATGTAGCAGGCAT.............................................................................................................................................................................................................................................................................................................................................................................................2641.25500000000020030000
........................TTCGTTGAAAAGTATGTAGCAG.................................................................................................................................................................................................................................................................................................................................................................................................2251.20600010010200002000
....................................................................................................................................................................................................CGGGTGGAGGGGCGTGGGA---.....................................................................................................................................................................................................................1911.00100000000000001000
........................TTCGTTGAAAAGTATGTAGCAGGCAGA............................................................................................................................................................................................................................................................................................................................................................................................2721.00200000000010010000
.........................TCGTTGAAAAGTATGTAGCAGGCAT.............................................................................................................................................................................................................................................................................................................................................................................................2541.00400000000000040000
............................................AGGCAGAAGAAAGCGTT..................................................................................................................................................................................................................................................................................................................................................................................17200.9018000000000018000000
........................TTCGTTGAAAAGTATGTAGCAGGCAC.............................................................................................................................................................................................................................................................................................................................................................................................2640.75300000000000021000
................................AAAGTATGTAGCAGGCAGA............................................................................................................................................................................................................................................................................................................................................................................................1930.67200000200000000000
...................................................................................ATTCTTGATCGTGAT.............................................................................................................................................................................................................................................................................................................................................1520.50100000000100000000
........................TTCGTTGAAAAGTATGTAGCA..................................................................................................................................................................................................................................................................................................................................................................................................2160.33200000010100000000
........................TTCGTTGAAAAGTATGTAGCAGGCT..............................................................................................................................................................................................................................................................................................................................................................................................25150.33500000000000050000
........................TTCGTTGAAAAGTATGTAGCAGGCAA.............................................................................................................................................................................................................................................................................................................................................................................................26150.33500000000010022000
...............................AAAAGTATGTAGCAGGC...............................................................................................................................................................................................................................................................................................................................................................................................1760.33200000000002000000
........................TTCGTTGAAAAGTATGTAGCAGGT...............................................................................................................................................................................................................................................................................................................................................................................................24200.25500000000000050000
.........................TCGTTGAAAAGTATGTAGCAGGCAA.............................................................................................................................................................................................................................................................................................................................................................................................25150.20300000000000030000
...................................GTATGTAGCAGGCAGAA...........................................................................................................................................................................................................................................................................................................................................................................................1760.17100000000001000000
...........................................CAGGCAGAAGAAAGCGT...................................................................................................................................................................................................................................................................................................................................................................................17200.15300000000003000000
.............................................GGCAGAAGAAAGCGTTTC................................................................................................................................................................................................................................................................................................................................................................................18200.15300000000003000000
........................TTCGTTGAAAAGTATGTAGCAGGCTA.............................................................................................................................................................................................................................................................................................................................................................................................26200.15300000000000030000
........................TTCGTTGAAAAGTATGTAGCAGGCG..............................................................................................................................................................................................................................................................................................................................................................................................2570.14100000000000010000
........................TTCGTTGAAAAGTATGTAGCAGGA...............................................................................................................................................................................................................................................................................................................................................................................................24140.07100000000000001000
...............................AAAAGTATGTAGCAG.................................................................................................................................................................................................................................................................................................................................................................................................15150.07100000000001000000
...............................................CAGAAGAAAGCGTTT.................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
............................................AGGCAGAAGAAAGCGTTTC................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000001000000
............................................AGGCAGAAGAAAGCGTTT.................................................................................................................................................................................................................................................................................................................................................................................18200.05100000000001000000
..............................................GCAGAAGAAAGCGTTTC................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
droSec2
AGA---------------------TTCGTTGAAAAGTATGTAGCAGGCAGAAGAAATCGTTTCC----ATATAAGGTAT--ACATTCTTGATCATGATCAATGTTTTGA----------------TTTTTCT-------TCG----TTTTAT---------TG-CTGGTCTTGCCAATTTCAATCGGTATTGGCCACGGGTGGAGGGGCGTGGGA---CACCTACA-------------------------------------AAACGCT-AA------AACG-----------------------------GTCACGCCCACACTCTTGATAAATTTTTAAATATTT--TCTCATATTATTTA-TCTTTATCCCAG-ATA------------------T-----------------CCTACAGCAT--TCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................ACGGGTGGAGGGGCGTGGG.........................................................................................................................................................................................................................19181.008100180
....................................................................................................................................................................................................CGGGTGGAGGGGCGTGGG.........................................................................................................................................................................................................................18134.003400034
...................................................................................................................................................................................................ACGGGTGGAGGGGCGTGGGA---.....................................................................................................................................................................................................................20125.002500025
....................................................................................................................................................................................................CGGGTGGAGGGGCGTGGGA---.....................................................................................................................................................................................................................19115.001500015
...................................................................................................................................................................................................ACGGGTGGAGGGGCGTGGGT---.....................................................................................................................................................................................................................2012.0020002
....................................................................................................................................................................................................CGGGTGGAGGGGCGTGGGT---.....................................................................................................................................................................................................................1911.0010001
....................................................................................................................................................................................................CGGGTGGAGGGGCGTGGGA---T....................................................................................................................................................................................................................2011.0010001
....................................................................................................................................................................................................CGGGTGGAGGGGCGTGGGC---.....................................................................................................................................................................................................................1911.0010001
........................TTCGTTGAAAAGTATGTAGCAGGC...............................................................................................................................................................................................................................................................................................................................................................................................2430.6722000
........................TTCGTTGAAAAGTATGTAGCAGG................................................................................................................................................................................................................................................................................................................................................................................................2350.2011000
.....................................................................................................TGTTTTGA----------------TTTTTCT-------TCG----TT...........................................................................................................................................................................................................................................................................................2060.1711000
dm3
AGA---------------------TTCGTTAAAAAGTATGTAACAGGCAGATGGAAGAGTGTCCGACTATATAAAGTATATATATTCTTGATCAGGATCAATAGCCGAGTCGATCT-AGCCATGT---CCGTCTG----------------------------TCCGT----TTTAACGTCGAGA-----------------------TCTCAGGAAC----TA------------------------------------------------G------AATGTTAAGATAAACCATACTGATTCTAGAGACATCACGCCCACACTTTCGATACATTTTTAAATATTT--TCTCATAATATCTA-TCGATATCCCAG-ATA------------------T-----------------CCTACAGCATTTTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................TTGATCAGGATCAATAGCCGAGTC................................................................................................................................................................................................................................................................................................................................24204.3587000000000000000000000020000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140000000036000000000000000000010000000000001000000000900000032000000000100000000000000000001000000000000000000000000000000000000000000000000001000000000000000009000000000000000500000000
.......................................................................TAAAGTATATATATTCTTGATCAGGA..............................................................................................................................................................................................................................................................................................................................................26203.70740000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000200001040000300100000000000000000000000000000000000000000002000000000000000000000160222170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................ATCAGGATCAATAGCCGAGTC................................................................................................................................................................................................................................................................................................................................21203.406800000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000010000000000000000000000000000000000000000000000000002000200000000000000000000000590000000000000000000100000000
.................................................GATGGAAGAGTGTCCGAC............................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000
.............................................................................................AGGATCAATAGCCGAGTCGATCT-AGC.......................................................................................................................................................................................................................................................................................................................26202.404800000000000000000000000000000000000000000000000020000000010000000000000000000000000000000000000000000000000000000000000000000000000010000006000000000000000000000000000000000000000000000000000000000000000000000000000000401904350000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000
.................................................................................................................TCT-AGCCATGT---CCGTCTG----------------------------TCC.........................................................................................................................................................................................................................................................................21202.25450000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000001000000000000000000111010000000000000000000000000000000000000000000000200040000000000000002300010000400000000000001004184000000
.......................................................................................TTGATCAGGATCAATAGCCGAG..................................................................................................................................................................................................................................................................................................................................22201.402800000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001000000000016000000004200000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
.................................................................................................................TCT-AGCCATGT---CCGTCTG----------------------------TCCGT----...................................................................................................................................................................................................................................................................23201.30260000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100002000500000000000000000000000000000000000000000000000000003000000000000000100000000010400020000000000000000000000000000000000000000000200000000000000000000000000000000202000000000000000001000000
................................................................................................................ATCT-AGCCATGT---CCGTCTG----------------------------TC..........................................................................................................................................................................................................................................................................21201.302600000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001230000000000000000000000000000000020000001100001000000000000000000000000000000000000000001000120000000000000000000000000000000000000000000100000000
...................................................................................................................T-AGCCATGT---CCGTCTG----------------------------TCCGT----...................................................................................................................................................................................................................................................................21201.25250000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000001000000000000000000000000000000000000000000000000001000000000000000200001100000000000000000000000000000000000000000000000001000060100000000000000002000000200000000000000000120000000
.......................................................................................TTGATCAGGATCAATAGCCGAGTCG...............................................................................................................................................................................................................................................................................................................................25201.20241020000000000000000000040000000000000000102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000020000000000000000000000000000000000000000000000000000000000000000000000002000000000001000000000000000000000000000000000000000000000000000000001300000000030000000000000000000000000
.......................................................................................TTGATCAGGATCAATAGCC.....................................................................................................................................................................................................................................................................................................................................19201.202400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000020000000000000000000000000000000000000000000000000000000300000000000000000003000000000000000000000000000000000000000000000000000000000000000000000020000000001000000000000000000010000000
........................TTCGTTAAAAAGTATGTAACAGGCAGA............................................................................................................................................................................................................................................................................................................................................................................................2791.11100000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000100000000000000000000400000
..................................................................................................CAATAGCCGAGTCGATCT-AGC.......................................................................................................................................................................................................................................................................................................................21201.052100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001010000150000000000000000000000000000
..................................................................................................................................................................................................................................................................................................AAACCATACTGATTCTAGAGA........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................GATGGAAGAGTGTCCGACTAT.........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TCAATAGCCGAGTCGATCT-AG........................................................................................................................................................................................................................................................................................................................21201.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000010000000000000000000000000000122000000000000000000200000010
......................................................................................................................................................................GT----TTTAACGTCGAGA-----------------------TCTCAG.........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................CTG----------------------------TCCGT----TTTAACGTCGAGA-----------------------...............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................TCGATCT-AGCCATGT---CCGTCTG----------------------------TC..........................................................................................................................................................................................................................................................................24201.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000200000000000100010103130000000000000000000001000000000000000000000000000010000000001000000000000000211000000000000000000000000
.................................................................................................................TCT-AGCCATGT---CCGTCTG----------------------------TCCGT----TTTAAC.............................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................ATGT---CCGTCTG----------------------------TCCGT----TTTAACG............................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................................CAGGCAGATGGAAGAGTGA.................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................AACAGGCAGATGGAAGAG....................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TCGATATCCCAG-ATA------------------T-----------------CCTACA........2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TGATTCTAGAGACATCACGC................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTCGTTAAAAAGTATGTAACAGGCA..............................................................................................................................................................................................................................................................................................................................................................................................25110.91100000000000000000000000000000000000000000000000000000000000000000000000000000021110000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................AGCCGAGTCGATCT-AGCCATGT---CCG............................................................................................................................................................................................................................................................................................................25200.801600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000
.............................................................................................................TCGATCT-AGCCATGT---CCGTCTG----------------------------............................................................................................................................................................................................................................................................................22200.70140000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100006000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000020000000
...............................................................................................................................................................................AACGTCGAGA-----------------------TCTCAGGAAC----T................................................................................................................................................................................................................21200.70140000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000200000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000080000000000000000000000000000
.........................TCGTTAAAAAGTATGTAACAGGCAGA............................................................................................................................................................................................................................................................................................................................................................................................2690.6760000000000000000000000000000000000000010000000000000100000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................TAAAGTATATATATTCTTGATCAGGAT.............................................................................................................................................................................................................................................................................................................................................27200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301000210004000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TATATTCTTGATCAGGATCAATAGC......................................................................................................................................................................................................................................................................................................................................25200.65130000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000001000000000000200000000000100000000000000000000000000000000000000000000000000000000000000001000000000000000005000000000000000000000000
.................................................................................................................TCT-AGCCATGT---CCGTCTG----------------------------TCCG........................................................................................................................................................................................................................................................................22200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112000000201000000000000000201000000
.........................................................................................................CGAGTCGATCT-AGCCATGT---CC.............................................................................................................................................................................................................................................................................................................21200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000200000000000003000000000000000000100000000000000000000000000000000000000000000000000050000000000000000000100000000
........................TTCGTTAAAAAGTATGTAACAGGC...............................................................................................................................................................................................................................................................................................................................................................................................24110.6470000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000
.....................................................................................................TAGCCGAGTCGATCT-AGCCATGT---CCG............................................................................................................................................................................................................................................................................................................26200.60120000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000200000000001000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000100000000
.......................................................................................TTGATCAGGATCAATAGCCGAGTCGA..............................................................................................................................................................................................................................................................................................................................26200.60120000000000000000000000000000000000000000000000000000000000000000000000000000020000600000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................ATATTCTTGATCAGGATCAATAGCC.....................................................................................................................................................................................................................................................................................................................................25200.60120000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000910000000000000000000000000
..........................................................................................................GAGTCGATCT-AGCCATGT---CCG............................................................................................................................................................................................................................................................................................................21200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030010000000000000000000000000000000000000000000001000000000000000000000000000000000010000000000000000000001000401000
..............................................................................TATATATTCTTGATCAGGATC............................................................................................................................................................................................................................................................................................................................................21200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000200000000000000010000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000
...................................................................................................................T-AGCCATGT---CCGTCTG----------------------------TCCG........................................................................................................................................................................................................................................................................20200.55110000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000100000000300000000000000000000000000
...............................................................................................................GATCT-AGCCATGT---CCGTCTG----------------------------T...........................................................................................................................................................................................................................................................................21200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000010002000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000300000010
.......................................................................................................GCCGAGTCGATCT-AGCCATGT---CCGT...........................................................................................................................................................................................................................................................................................................25200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................TCT-AGCCATGT---CCGTCTG----------------------------T...........................................................................................................................................................................................................................................................................19200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000000000000000100000000000100000000000000000500100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................ATCAATAGCCGAGTCGATCT-A.........................................................................................................................................................................................................................................................................................................................21200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000040000000000000000000000000000001000000000000003000000000000000000001000000
.............................................................................................................TCGATCT-AGCCATGT---CCGTCT.........................................................................................................................................................................................................................................................................................................21200.50100000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000200000040
.............................................................................................AGGATCAATAGCCGAGTCGATCT-A.........................................................................................................................................................................................................................................................................................................................24200.50100000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000001000000000000000200220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................GAGTCGATCT-AGCCATGT---CCGTCT.........................................................................................................................................................................................................................................................................................................24200.50100000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000300000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000200000000
.......................................................................................TTGATCAGGATCAATAGCCGAGTCGAT.............................................................................................................................................................................................................................................................................................................................27200.50100000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010100000000000000000000000000000000000000200002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................GTCGATCT-AGCCATGT---CCGTCTG----------------------------TC..........................................................................................................................................................................................................................................................................25200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000200200000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000
.............................................................................................................................................................................TTAACGTCGAGA-----------------------TCTCAGGA.......................................................................................................................................................................................................................2040.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.......................................................................................TTGATCAGGATCAATAGCCGAGT.................................................................................................................................................................................................................................................................................................................................23200.4590000000000000000000000100000000000000000000000000000200001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000
................................................................................TATATTCTTGATCAGGATCAATAGCCG....................................................................................................................................................................................................................................................................................................................................27200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003120000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000
...........................................................................................................AGTCGATCT-AGCCATGT---CCGTC..........................................................................................................................................................................................................................................................................................................22200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000010000100010
...................................................................................................AATAGCCGAGTCGATCT-AGCC......................................................................................................................................................................................................................................................................................................................21200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000010000000000000000000000020000000000000000100000030000000000000000000000000000
.....................................................................................................TAGCCGAGTCGATCT-AGCCATGT---CC.............................................................................................................................................................................................................................................................................................................25200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000410000000000000000000000000
.............................................................................................................TCGATCT-AGCCATGT---CCGTCTG----------------------------TCCG........................................................................................................................................................................................................................................................................26200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000000000300000000010000000000000000010000000
...............................................................................................................GATCT-AGCCATGT---CCGTCTG----------------------------TCCGT----...................................................................................................................................................................................................................................................................25200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000100000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TTGATCAGGATCAATAGCCGA...................................................................................................................................................................................................................................................................................................................................21200.4590000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100200000010000000000000000000000000000000000000000000000000000000020000000000001000000000000000000000000000000000000
....................................................................................................ATAGCCGAGTCGATCT-AGCCA.....................................................................................................................................................................................................................................................................................................................21200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000001000000000000000000000000000000000000000000030000000000000300000000000000010000
....................................................................................TTCTTGATCAGGATCAATAGC......................................................................................................................................................................................................................................................................................................................................21200.4590000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000040000000000000000000000000000000000000102000000000000000000000000000000000
.............................................................................................AGGATCAATAGCCGAGTCGATC............................................................................................................................................................................................................................................................................................................................22200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000003000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000
...........................................................................................TCAGGATCAATAGCCGAGTCG...............................................................................................................................................................................................................................................................................................................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000040000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...........................................................................................................AGTCGATCT-AGCCATGT---CCGTCTG----------------------------............................................................................................................................................................................................................................................................................24200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................CGATCT-AGCCATGT---CCGTCTG----------------------------............................................................................................................................................................................................................................................................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000000000000002000000000000000000000000000000000000000000000100100000000000001010
.....................................................................................................TAGCCGAGTCGATCT-AGCCATGT---C..............................................................................................................................................................................................................................................................................................................24200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000400000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
........................................................................................TGATCAGGATCAATAGCCGAGTCGA..............................................................................................................................................................................................................................................................................................................................25200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
....................................................................................TTCTTGATCAGGATCAATAGCCGAG..................................................................................................................................................................................................................................................................................................................................25200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000100000000
................................................................................TATATTCTTGATCAGGATCAATAGCC.....................................................................................................................................................................................................................................................................................................................................26200.4080000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000202000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TCAATAGCCGAGTCGATCT-AGCCA.....................................................................................................................................................................................................................................................................................................................24200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100004000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000
.....................................................................................................TAGCCGAGTCGATCT-AGCCATG...................................................................................................................................................................................................................................................................................................................22200.3570000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000000010000000100000000000000000000002000
.............................................................................................................TCGATCT-AGCCATGT---CCGTCTG----------------------------T...........................................................................................................................................................................................................................................................................23200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000200000000000000000000010000000000000000000000000000000000000000000010000000000000000000000000000000010000000000000000000000000
.......................................................................................................GCCGAGTCGATCT-AGCCATGT---CCGTC..........................................................................................................................................................................................................................................................................................................26200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000011000000
................................................................................................................ATCT-AGCCATGT---CCGTCTG----------------------------TCCGT----...................................................................................................................................................................................................................................................................24200.3570000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000
.....................................................................................................TAGCCGAGTCGATCT-AGCCAT....................................................................................................................................................................................................................................................................................................................21200.3570000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
...........................................................................................TCAGGATCAATAGCCGAGTCGATCT-A.........................................................................................................................................................................................................................................................................................................................26200.3570000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000
.............................................................................................................TCGATCT-AGCCATGT---CCGTCTG----------------------------TCCGT----...................................................................................................................................................................................................................................................................27200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000001000000
..................................................................................................CAATAGCCGAGTCGATCT-AG........................................................................................................................................................................................................................................................................................................................20200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
..................................................................................TATTCTTGATCAGGATCAATAGCCGA...................................................................................................................................................................................................................................................................................................................................26200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000020200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TCTTGATCAGGATCAATAGCCGAGTC................................................................................................................................................................................................................................................................................................................................26200.3060000000000000000000000100000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................GAGTCGATCT-AGCCATGT---CCGTCTG----------------------------............................................................................................................................................................................................................................................................................25200.3060000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000
.................................................................................................................TCT-AGCCATGT---CCGTCTG----------------------------TC..........................................................................................................................................................................................................................................................................20200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000010000000
..................................................................................TATTCTTGATCAGGATCAATAGCCGAG..................................................................................................................................................................................................................................................................................................................................27200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001020000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000
.......................................................................................TTGATCAGGATCAATAGCCG....................................................................................................................................................................................................................................................................................................................................20200.3060000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TAAAGTATATATATTCTTGATCAGG...............................................................................................................................................................................................................................................................................................................................................25200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000001000000000000000200000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TCGATCT-AGCCATGT---CCGTCTG----------------------------TCC.........................................................................................................................................................................................................................................................................25200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010101000000000000000000000000000000000000000000000000000000000000000000001100000000100000000000000000000000000
...................................................................................................AATAGCCGAGTCGATCT-AGCCATGT---C..............................................................................................................................................................................................................................................................................................................26200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................GATCT-AGCCATGT---CCGTCTG----------------------------TCCG........................................................................................................................................................................................................................................................................24200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TCTTGATCAGGATCAATAGCCGAG..................................................................................................................................................................................................................................................................................................................................24200.3060000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................TATATATTCTTGATCAGGATCAATAGCC.....................................................................................................................................................................................................................................................................................................................................28200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GCCGAGTCGATCT-AGCCATGT---...............................................................................................................................................................................................................................................................................................................21200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000001000
...........................................................................................TCAGGATCAATAGCCGAGTCGAT.............................................................................................................................................................................................................................................................................................................................23200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000010030000000000000000000000000
...................................................................................................................T-AGCCATGT---CCGTCTG----------------------------TCC.........................................................................................................................................................................................................................................................................19200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000010000000
..............................AAAAAGTATGTAACAGGCAGA............................................................................................................................................................................................................................................................................................................................................................................................21180.2850000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
.....................................................................................TCTTGATCAGGATCAATAGCCG....................................................................................................................................................................................................................................................................................................................................22200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TCAATAGCCGAGTCGATCT-AGCCATG...................................................................................................................................................................................................................................................................................................................26200.2550000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000200000
........................................................................AAAGTATATATATTCTTGATCAGGA..............................................................................................................................................................................................................................................................................................................................................25200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000001000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TCCGACTATATAAAGTATATATATTC........................................................................................................................................................................................................................................................................................................................................................26200.2550000000000000000000000000000000000000000000000000000000000000000000000000000020100100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AGCCGAGTCGATCT-AGCCATG...................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
................................................................................................ATCAATAGCCGAGTCGATCT-..........................................................................................................................................................................................................................................................................................................................20200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000
........................................................................................TGATCAGGATCAATAGCCGAG..................................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000100000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TCGAGA-----------------------TCTCAGGAAC----TA------------------------------------------------G------AA......................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................AGGATCAATAGCCGAGTCGATCT-..........................................................................................................................................................................................................................................................................................................................23200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000002000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TGATCAGGATCAATAGCC.....................................................................................................................................................................................................................................................................................................................................18200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................ATTCTTGATCAGGATCAATAGCC.....................................................................................................................................................................................................................................................................................................................................23200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................TCAGGATCAATAGCCGAGTCGATC............................................................................................................................................................................................................................................................................................................................24200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001000
.................................................................................................TCAATAGCCGAGTCGATCT-AGCC......................................................................................................................................................................................................................................................................................................................23200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGA---------------------TTCGTTAAAAAGTATGTAACAGGTAGAAGGGAGCGTTTCCGACTATATAAAGTAT--ATATTCTTGGTCAGGATCAATAGGCGAGTTGATCT-GGCCATGT---CCGTCCGATTGC-TAAA--------------------------------TTTCTA------------ACGAGTAGAAAATCTT-------------------------TTTTCCACGCCCACTCTAACGCCCACAAGCCGCACAAACTT-----------------------------------GTCACGCCCACACTTTTAAAA-ATTTAAAAATTTCT--TTTCATATTATTCTTTTTTTACCCCAA-ATA-------------------------------------CTACCGATT--TTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................................................................................CACGCCCACTCTAACGCCCACAAGC.....................................................................................................................................................................25190.0511000000
droYak3
AGA---------------------TTCGTTGAAAAGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAAGTATATATATTCTTGATCAGGATCAATAGCCGAGTCGATCT-GGC---------------------AAAA--------------------------------TTTCTATCGATT---------------------------------TGCAAAAAAAACTTTTTGCCACGCCCACTCTAACGCCCTCAAACCGCCCAAAGCT-----------------------------------GCCACGCCCACACTATTGAAAAATGTTTTGATATTT--TTTCATTTT-TGTA-TTAGTCTTCTAA-ATT------------------T-----------------CCCACA--------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................GTATATATATTCTTGATCAGG...............................................................................................................................................................................................................................................................................................................................................21200.9018018000000000
..........................................................................................ATCAGGATCAATAGCCGAGTCGATC............................................................................................................................................................................................................................................................................................................................25200.6012000000000012
..........................................................................................ATCAGGATCAATAGCCG....................................................................................................................................................................................................................................................................................................................................17200.5511000000000011
..........................................................................................................................................................................................................................................TTTTTGCCACGCCCACTCTAACGCCCT..........................................................................................................................................................................27200.20404000000000
...................................................................................................................................................................................................................................................................CTCAAACCGCCCAAAGCT-----------------------------------GCCACGCC...............................................................................................................26200.20400400000000
..............................................................................................GGATCAATAGCCGAGTCGATCT-GGC---------------------..................................................................................................................................................................................................................................................................................................25200.10200200000000
..........................................................................................................................................................................................................................................................TCTAACGCCCTCAAACCGCCC................................................................................................................................................................21200.10202000000000
..................................................................................................................................................................................TTCTATCGATT---------------------------------TGCAAAAAAAACTTTT.................................................................................................................................................................................................27200.10202000000000
............................................................................TATATATATTCTTGATCAGGATCAAT.........................................................................................................................................................................................................................................................................................................................................26200.05100100000000
..................................................................................................................................................................................................................................AAAAAAACTTTTTGCCACGCCCACTC...................................................................................................................................................................................26200.05101000000000
........................................................................................................................................................................................................................................................ACTCTAACGCCCTCAAACCGCCCAAA.............................................................................................................................................................26200.05101000000000
.....................................................................................................................................................................................................................................................CCCACTCTAACGCCCTCAAACCGCC.................................................................................................................................................................25200.05101000000000
.........................................................................................................................................................................................................................................................CTCTAACGCCCTCAAACCGCCCAAAGCC-----------------------------------.......................................................................................................................28200.05100100000000
........................................TAACAGGCAGAAGGAAGCGTTTCCGACC...........................................................................................................................................................................................................................................................................................................................................................................28200.05100010000000
droEug1
AGA---------------------TTCGCTGAAAAGTATGTAACAGGTAGAAGGAAGCGTTTTCGACCCTATAATAT--ATTTATTCATGATCAGGATCAATAACGAAGTCGATTG-AGCCATGATTTCCCT-------TAA----CGCTAT-----CCTTTGTTAGT----CCAAAGTTCGAGATGAAGTGGCTCC--------------TGAA---AGCCGACA-------------------------------------AAACACATGCCAT------------------------------------TACATGGTCATACTTGTGCAGACTTGTGGAATGTCT--GCCCATGTCACATG-CCT---------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AGG---------------------CTCGTCGGAAAGTATTTAACAGATAGGAGAAAGCGATTCTGACACTATAAAGTAA--ATATCCTTGGTCAGG-TCAA------------TGT-AGCAATGT---CCATCC-------AAAATTTTAAC---------TG-ATTTTCTCATCAACTCCTATCAATAG-----------------------------ACCTACAAAAA------TTTGCCACGCCCACTCTAATGCCCACAAACCGGCCAAAACTGAAAGGGCCAGTTTTCT------------------TGC---------TTTGAAATTGTTTGTCAAAAATTT--ATTTGTGTCATCAA-TATCTATC----------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AGA---------------------TTCGTGCAAAAGTATGTAACAGATAGAAGGAAGCGTTTCCGACCCTATAAACTATATATATTCTTGATCAGGATCACTAGCCGAGTCGATCTAAGCCATGT---CCGTCTGTCCGTCA----GTCTGTCCGTCTG----TCTGTCTGTATGAACGCTGAGA-----------------------TCTCGGAAAC----TACA-------------------------------------AAA-GCT-AG------AAGGTTCAGATTTCC----------------------------CACTCATATTTATTTATTATTTATTT--ATTTAT-TTATTTA-TTT---------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AGG------------TATATTGATTTCGTTGAAAAGTATGCAACAGGAAAAAGGAAGCGTTTTCGACCCTATAAAGTAT--ATATTCTTGATAAGGATCAATAGCCGTGTCGATCT-AGCCATGT---CCGTTTG----------------------------TCTGTCCTTATAAACGTCAATC----TTGGCCAGAGA--------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CGTAGAGTAAAAGGGTATATTGTATTCGTGCATAAGTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATATTGTTGTTCAGGATCACTAGCCGAGTCGATCT-AGCCATGT---CCGTCTGTCCGT----------------CTG----TCTGTCCGTATGAACGCTGAGA-----------------------TCTCGGAAAC----TATA-------------------------------------AAA-GCT-AG------AG--------------------------------CTGTGGCCACAGTTTTGATACTATTATGAAAATTTTAATTGATA---TATA-TTTGTTTCGTCAATACCTATCGATTGGCCTAATCTAATAGTTGAGGCACTTGACTATAGCGT--TCSizeHit CountTotal NormTotal
No Reads
droFic1
ATA---------------------TTTTTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTAAAAGTAT--AT-------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBip1
ATA-------------------ATTTTGTCCAAAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droWil2
AAA---------------------A-CGTTAAAATGTATGTAACAGGCAGAATAAATCGTTTTCAGCCTTATAAAATATATATTTTCTTGATCATCATCAACAGCCTAATCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droMoj3
GGT---------------------TTTGT-GAAAAGTATGTAACAGGCAGATGGAATCATCGCAGACCCCATAAAGTATATATATTCTTGATCAGGACC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................CATCGCAGACCCCATAAAGTATATATA...........................................................................................................................................................................................................................................................................................................................................................27200.051100000
.....................................................................CATAAAGTATATATATTCTTGATC..................................................................................................................................................................................................................................................................................................................................................24200.051000010
........................................................TCATCGCAGACCCCATAAAGTA.................................................................................................................................................................................................................................................................................................................................................................22200.051100000
...........................GT-GAAAAGTATGTAACAGGCA..............................................................................................................................................................................................................................................................................................................................................................................................21200.051000010

Generated: 05/18/2015 at 08:49 AM