ID:

dsi_25178

 Coordinate:

3l:672313-672573 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.9 -13.9 -13.9

Flybase annnotation

CDS [3l_672574_672585_-]; five_prime_UTR [3l_672586_672686_-]; exon [3l_672574_672686_-]; CDS [3l_670843_672312_-]; exon [3l_670653_672312_-]; intron [3l_672313_672573_-]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGAGTGCAGAACCTGAAAGAGTGAGAGCGGGAGTGGAAATGTACTCTGACGTAAGTATACTTTCGTAGTGAGTAAGTGAGAGTGCATGCTTCGATTTCACATCTCTGAGCTAGAATACGCGAGACTCATTTGCGAATAAGATGAGGACATGTTCGTAAATATACATACATATGTAAATAAATATATATGAATGATATATCGCATACAGATAATTTGAGTTCCCAAGGCTATGCACCCTCAGCATCAATAACATATGTAACTAAGCCAAGGAATCGGATTTTACACAGAAATAAACCATGAATCAATTACAGAACGCCCATGAAAACTCGAATGGATCGCATCGTATCCGGAACGTGCTGAC
*********************************************************************..(((((((((..(((.((.(((...((((......))))...))))).)))...)))))))))..................****************************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 M023
head
..........................................................................................................................................................................................................................................................................................................................................ATGGATCGCATCGCATCCGGAACGTGC.... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.....GCAGAACCTGAAAGAGTGA................................................................................................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................AACTCGAATGGATCGCATCGCATC.............. 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.....GCAGAACCTGAAAGAGTGAGAGCGG........................................................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0
..................................................................................................................................TGCGAATAAGATGAGGACATG.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.....................................................................GAGTAAGTGAGAGTGCA................................................................................................................................................................................................................................................................................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................TATGTAACTAAGCCTAGGAATCGGA.................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................CAACGCCCACGAAAACTCGAATGGA.......................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................CTAATAAGTTGAGGACTTGTT................................................................................................................................................................................................................ 21 3 6 0.33 2 2 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TAATTTGAGTAACCAAGGCGA................................................................................................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................................................................................ATACGCGAAACTCAGGTGCG................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 1 0 0 0 0 0
.....GCACAACCTGAAAGA..................................................................................................................................................................................................................................................................................................................................................... 15 1 4 0.25 1 0 0 0 0 0 1 0 0 0
.......................................................................GTAAGTGAGAGCGCA................................................................................................................................................................................................................................................................................... 15 1 8 0.25 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................................GATGAGGACATTGTCGTA............................................................................................................................................................................................................ 18 2 9 0.22 2 0 0 0 0 0 0 2 0 0
................................GTGGAACTGTTCTCTGAGGT..................................................................................................................................................................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................................................................AGGCGAAGGAATCGGATTT................................................................................. 19 2 6 0.17 1 0 0 0 0 1 0 0 0 0
.................AGAGTGAGAGCGGGA......................................................................................................................................................................................................................................................................................................................................... 15 0 7 0.14 1 0 1 0 0 0 0 0 0 0
...................................................................................................................TACGCGAAACTCAGGTGCG................................................................................................................................................................................................................................... 19 3 15 0.13 2 0 0 0 1 0 0 0 0 1
..................................................................................................................................................................................................................................GCTATGTACCTTCAGC....................................................................................................................... 16 2 20 0.10 2 2 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................TCAGCCAAGGAGTCGTATTT................................................................................. 20 3 11 0.09 1 1 0 0 0 0 0 0 0 0
...............AAAGAGTGCGAGCGGG.......................................................................................................................................................................................................................................................................................................................................... 16 1 12 0.08 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................GATGAGGACATTATCGT............................................................................................................................................................................................................. 17 2 19 0.05 1 0 0 1 0 0 0 0 0 0
.......AGAACCTGAAACCGTG.................................................................................................................................................................................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

TCTCACGTCTTGGACTTTCTCACTCTCGCCCTCACCTTTACATGAGACTGCATTCATATGAAAGCATCACTCATTCACTCTCACGTACGAAGCTAAAGTGTAGAGACTCGATCTTATGCGCTCTGAGTAAACGCTTATTCTACTCCTGTACAAGCATTTATATGTATGTATACATTTATTTATATATACTTACTATATAGCGTATGTCTATTAAACTCAAGGGTTCCGATACGTGGGAGTCGTAGTTATTGTATACATTGATTCGGTTCCTTAGCCTAAAATGTGTCTTTATTTGGTACTTAGTTAATGTCTTGCGGGTACTTTTGAGCTTACCTAGCGTAGCATAGGCCTTGCACGACTG
******************************************************************************************************************************************************************************************************************..(((((((((..(((.((.(((...((((......))))...))))).)))...)))))))))..................********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body
.......................................................................................................AGAGTCGATCTTATGCTTTCT............................................................................................................................................................................................................................................. 21 3 1 1.00 1 0 0 0 1 0
.....................................................................................................................................................................................................................................................................................AAAATGTGACTTTATTTGG................................................................. 19 1 1 1.00 1 0 1 0 0 0
.....................................................................................................AGAGACTCGATCTTATGCGCTCTGAGT......................................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................................CTCGGAGTCGCAGTTATTG.............................................................................................................. 19 3 15 0.53 8 0 0 0 0 8
.......................................................................................................AGATTCGATCTTATGGTCTCT............................................................................................................................................................................................................................................. 21 3 2 0.50 1 1 0 0 0 0
TCTAACGTCTTGGACT......................................................................................................................................................................................................................................................................................................................................................... 16 1 7 0.29 2 0 0 2 0 0
...........................................................................................................................................................................................................................................GGAGTCGCAGTTATTGC............................................................................................................. 17 2 5 0.20 1 0 0 1 0 0
.......................................................................................................AGATTCGATCTTATGCTTTCT............................................................................................................................................................................................................................................. 21 3 5 0.20 1 0 0 1 0 0
TCTAACGTCTTGGACTC........................................................................................................................................................................................................................................................................................................................................................ 17 2 20 0.15 3 2 0 1 0 0
.....................................................................................................................................................................................................................ACCACAAGGGTTCCGATA.................................................................................................................................. 18 2 7 0.14 1 0 1 0 0 0
...........................................................................................................................................................................................................................................GGAGTCGCAGTTATT............................................................................................................... 15 1 7 0.14 1 0 0 1 0 0
...........................................................................................................................................................................................................................................GGAGTCGTAGTTATG............................................................................................................... 15 1 9 0.11 1 0 0 1 0 0
......................................................................................................................................TTATGCTACTCCTGT.................................................................................................................................................................................................................... 15 1 10 0.10 1 0 0 0 1 0
...........................................................................................................................................................................................................................................GGAGTCGCAGTTATGGT............................................................................................................. 17 2 11 0.09 1 0 0 1 0 0
.......................................................................................................................................................................................................................................................................................................................CTGCTCGTACTTTTGAGCTT.............................. 20 3 17 0.06 1 0 1 0 0 0
.........................................................AGGAAAGCGTGACTCATTC............................................................................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 1 0 0
...................................................................................................................CTGCGCTCTCAGTAAA...................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 1 0 0 0
.........................................................................................................................................................................................................................CCAGGGTTTCGATACG................................................................................................................................ 16 2 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:672263-672623 - dsi_25178 AGAGTGCAGAA--------C--------------------------CTGAAA--------GAGTGAGA--GC---------------GGGA--------GTGGAAATGTACTCTGACGTAAGTATACTTT-----CGTAGTGAG-----TAAGTGAGAGTGCA------TGCTTCGATT--------------------TCACATCTCTGAGCTAGAATACGCG-AGACTCATTTGCGAATAAGATGAGGACATGTTC-GT----A----AATATACATACA--TATGTAAATAAATATATATGA-------ATGATATAT-CG-------------------------CATACAGATAA-----------------------------------------------------------------------------------------------------------------------------T------------------TTGAGTTCCCAAGGCTATGCACCCTCAGCATCAATAACAT--ATGTAACTAAGCCAAGGAATCGGATTTTA------CACAGAAATAAACCATGAATCAATTACAGAA------CGCCCATGAAAACTCGAATGGATCGCATCGTATCCGGAACGTGCTGAC
droSec2 scaffold_2:727490-727857 - AGAGTGCAGAA--------C--------------------------CTGAAA--------GAGTAAGA--GC---------------GGGA--------GAGGAAATGTACTCTGACGTAAGTATACTTT-----CGTAGTGAG------AAGTGAGAGTGCAA-----TGCTTCGATT-------------TCAAATTTGTTATCTCTGAGCTAGAATACGCG-AGACTCATTTGCGAATAAGATGAGAACATGTTC-GT----A----AATATACATACA--TATGTACATAAATATGTATGA-------ATGATATAT-CG-------------------------CATACAGATAA-----------------------------------------------------------------------------------------------------------------------------T------------------TTGAGTTCCCAAGGCTATGCACCCTCAGCATCAATAACAT--ATGTAACTAAGCCTAGGAATCGGATTTTA------CACAGAAATAAACCATGAATCAATTACAGAA------CGCCCACGAAAACTCGAATGGATCGCATCGCATCCGGAACGTGCTGAC
dm3 chr3L:707567-707939 - AGAGTGGAGAA--------C--------------------------CTGAAA--------GTGTGAGA--GC---------------GGGA--------GTGGAAATGTACTCTGACGTAAGTATACTTT-----CGTAGTGAG-----TAAGTGAGAGTGCAA-----TGCTTCGTTTTAGTAAAATCTTTTGAAATTTGTTATCTCTGAGCTAAAATATGCG-AGACCCATTTGCGAATAAGAAGAGGGCATGTTTTGT----A----AATATACATACA----------TAAATATGTATAAGGCATTCATGATATACACG-------------------------CATACAGATAA-----------------------------------------------------------------------------------------------------------------------------T------------------TTGAGTTC------------------TGTATCAATAACATACATGTAACTAAGCCTAGAAATCGGATTTTA------TAAAGAAATAAACCATGATTCAATTTCAGAATGATGACACCCACAAAAACTCGAATGGATCGCATCGCATACGGAACGTGCTGAC
droEre2 scaffold_4784:717484-717974 - AGAGTGGAGAA--------G--------------------------CTGAAA--------GCGCGAGA--GT---------------GGGA--------GTGGAAATGTACTCTGACGTAAGTAC--TTT-----CGTAGTGAG-----TAAGTGAGAGTGCAA-----TGATTCGCTT-AGTTAAATCTTTTGAAA-TTGTTATCTCTGAGCTAAAATATGCG-TGACT--TTTGGAAATCAGATGAGAACATGTTA-TC----A----AATATATA------AATGTACATAAATATG----AGGTGTTCATAATGTATCCG-------------------------TATAAAGATACAGTCACTAGCATATGCCAACACAACAATTTTATTTAAAAACAAT-ATGAATTTAACAACAATTTTATTTAAAAACAATATGAATTTAACGTAAAGCTACCATAAACCCGAATCTTACTTTAAAGTT------------------GTTAGTTTCGAATGCGTTGCACCCTTAGCTCCAATATCA------TAACATAGCCTATAT-----------------AAAAGACTTAAACCATGATCCAATTACAGAATGACGACTCGCACGAAAATTCCAATGGATCGCAGCGCATCCGGAATGTGTTGAC
droYak3 3L:699369-699834 - AGAGTGGAGAA--------CCT--------GAGCG------------TGAAA--------GCGTGAGA--GT---------------GGGA--------GTGGAAATGTACTCTGACGTAAGTAC--TTT-----CGTAGTGAG-----TAAGTGAGAGTGCAA-----TGCTTCGATTGAGTTAAGTCTTTTGAAA-TTGTTATCTCTCAGCTGAAATGTGCGGAGAGCCTTTTGAGAATCAGATGAGGACATGTGC-GTTATTA----TATATACATACATATATGTACATAAA---------AGCGTTCATGATATATCCG-------------------------GACACAGATACAGTCACTAGCATATGCCAACACAACAATT-GAGTTAAAAACAAAAATGACAGTTCCT----------------ATAATATTTATTTAATG-----------------------------TAAAGTT------------------TTTAGTTTCGCATGTAATGCACTCTTAGCTTCA------------TAACTTAGCCTATAAATCTGACTTTA------AAAAGAAGTAAACCATGATGTCATTTCAGAATGACGACGCCCACGAGAGTTCAAATGGATCGCAGCGCATCCGCAACGTGCTGAC
droEug1 scf7180000409184:739486-739577 - AGAGTCGGAA-AGAGCGAAT------------------CGCCACTGAT----------------GTGT--GA---------------GTGA--------GTGGAAATGTACTCTGACGTAAGTACT--TTT----TGTAGTGAG-----TAACTGGGAGGGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000300910:790920-791024 - AGAGTGGCGA-AGAGCGCACCGCAGCACAGAA----------AC--CTGTA--------------TGT--GT---------------GAGA--------GAGGAAATGTACTCTGACGTAAGTACT--CTTTTCTCACAGTGAG-----CAACTGAAAGGCCAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000414038:117922-118012 + CGTATCGCATA--------T----------GT----------GT--CTGTAT--------GTGTG------------------------------------AGAAATGTTCTCTGACGTAAGTACT--TTTATGTTATAGTGAG-----TACCTGAGCGGCGA------GACTGCGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491249:872515-872618 - AGAGTGGAGA-AG------------------AGCGGGACATTGTTTTT------------------GT--GT---------------GTGA--------GTGGAAATGTACTCTGACGTAAGTAC--TTT-----TGCAGTAAG-----TAAGTGAGAAAGCAGTACTATGATTCGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000780101:239692-239785 + AGAGTGGAGA-AG------------------AGCGGGACTACATTTGT------------------GT--TT---------------GGGA--------GTGGAAATGTACTCTGACGTAAGTAC--TTT-----TACAGTGAGTAGAGTAAGTGAGAGGGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453052:531172-531502 + CGGGACCAAA---------------------TACCAATCTTTAT--CTG--------------TATGG--GT---------------GAGA--------GTGGAAATGTACTCTGACGTAAGTAC--TTT-----TACAGTGAG-----TAGCTGAGAGGGCAA-----CGCTTCGATA-------------CC----TCGATACCTTTG---------------------------------------------TTT-GT----TTTTAAA-----ATTCA--TATGTTGGTT----------A-------ATGAGATAC-CCTTTAAAAATTTAAACTGATATAATCTAAAAAGGTAA-----------------------------------------------------------------------------------------------------------------------------CTTTAAAAAGACTTTTTTTTTGT-----------G--GTACCCCCT--------------------------TCTTGGAATAGCTTTTAAAGAGCCCATCGAAACTGACCACAGACCAATTGCAGAATGACGACGGCCAGGAAAACTCGAATGGGATGCAGCGCATCCGGAACGTATTGAC
droKik1 scf7180000301816:14849-14903 + AGAGAAA-GCC--------A--------------------------TTGCGA--------GCC-AAAA--GA---------------GCCA--------GGGGACATGTACTCTGACGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13337:11654646-11654729 - AGAGAGCG-TAAG------------------A--------------------CCAGGAAAGAG--A------CTAATTGTAGACGAAGAGAGCCTAACTGTACAAATGTACTCTGACGTAAGTACC--CTCT---C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396589:2318343-2318427 + AGAGAGCG-TGAG------------------G--------------------CCTGGAAAGAGCGA------CTATTTTTGGACGGAGAGAG-CTAACCGTAAAAATGTACTCTGAGGTAAGTACC--CTCT---C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XR_group8:4532261-4532339 + AAACAAC-GTA--------T--------------------------CTGTAT--------GTGTGAG-CAGT---------------ATAT--------ATAGAAATGTACTCTGACGTAAGTAGTCGGC-----C--TGAGAG------AGGTGAGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_29:768276-768332 + AAACAAC-GTA--------T--------------------------CTGTAT--------GTGTGAG-CAGT---------------ATAT--------ATAGAAATGTACTCTGACGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004511:8900015-8900067 - GGATGAGCAAA--------------------A------------------ACC--------CAAGAGA--GA---------------GACA--------TGTGAAATGTACTCTGACGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:8927887-8927912 + TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAACGTATACGTAACGTCCTGAC
droMoj3 scaffold_6680:6417698-6417727 - TGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCAGCGCATACGTAACGTCTTGAC
droGri2 scaffold_15110:4690168-4690213 + TGAGCGTG-TCGG------------------A------------------GA--GAGAGAGAGAGAGA--GA---------------GAGA--------GTGGGAGTGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGAGTGCAGAA--------C--------------------------CTGAAA--------GAGTGAGA--GC---------------GGGA--------GTGGAAATGTACTCTGACGTAAGTATACTTT-----CGTAGTGAG-----TAAGTGAGAGTGCA------TGCTTCGATT--------------------TCACATCTCTGAGCTAGAATACGCG-AGACTCATTTGCGAATAAGATGAGGACATGTTC-GT----A----AATATACATACA--TATGTAAATAAATATATATGA-------ATGATATAT-CG-------------------------CATACAGATAA-----------------------------------------------------------------------------------------------------------------------------T------------------TTGAGTTCCCAAGGCTATGCACCCTCAGCATCAATAACAT--ATGTAACTAAGCCAAGGAATCGGATTTTA------CACAGAAATAAACCATGAATCAATTACAGAA------CGCCCATGAAAACTCGAATGGATCGCATCGTATCCGGAACGTGCTGACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....GCAGAA--------C--------------------------CTGAAA--------GAGTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
.....GCAGAA--------C--------------------------CTGAAA--------GAGTGAGA--GC---------------GG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
..........................................................................................................................................................................................................................................TGCGAATAAGATGAGGACATG...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
.............................................................................................................................................GAG-----TAAGTGAGAGTGCA------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
...................................................A--------GAGTGAGA--GC---------------GGGA--------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1570.14100000010000000000
droSec2
AGAGTGCAGAA--------C--------------------------CTGAAA--------GAGTAAGA--GC---------------GGGA--------GAGGAAATGTACTCTGACGTAAGTATACTTT-----CGTAGTGAG------AAGTGAGAGTGCAA-----TGCTTCGATT-------------TCAAATTTGTTATCTCTGAGCTAGAATACGCG-AGACTCATTTGCGAATAAGATGAGAACATGTTC-GT----A----AATATACATACA--TATGTACATAAATATGTATGA-------ATGATATAT-CG-------------------------CATACAGATAA-----------------------------------------------------------------------------------------------------------------------------T------------------TTGAGTTCCCAAGGCTATGCACCCTCAGCATCAATAACAT--ATGTAACTAAGCCTAGGAATCGGATTTTA------CACAGAAATAAACCATGAATCAATTACAGAA------CGCCCACGAAAACTCGAATGGATCGCATCGCATCCGGAACGTGCTGACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTCGAATGGATCGCATCG..................2111.0010100
dm3
AGAGTGGAGAA--------C--------------------------CTGAAA--------GTGTGAGA--GC---------------GGGA--------GTGGAAATGTACTCTGACGTAAGTATACTTT-----CGTAGTGAG-----TAAGTGAGAGTGCAA-----TGCTTCGTTTTAGTAAAATCTTTTGAAATTTGTTATCTCTGAGCTAAAATATGCG-AGACCCATTTGCGAATAAGAAGAGGGCATGTTTTGT----A----AATATACATACA----------TAAATATGTATAAGGCATTCATGATATACACG-------------------------CATACAGATAA-----------------------------------------------------------------------------------------------------------------------------T------------------TTGAGTTC------------------TGTATCAATAACATACATGTAACTAAGCCTAGAAATCGGATTTTA------TAAAGAAATAAACCATGATTCAATTTCAGAATGATGACACCCACAAAAACTCGAATGGATCGCATCGCATACGGAACGTGCTGACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCGCATCGCATACGGAACGTGC....26110.00100000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000020000000100001000100000000000000000000000000000000000000000000000000000000000000000100020000000000000000000000000000000
............................................................GTGTGAGA--GC---------------GGGA--------GTGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2019.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TGAGA--GC---------------GGGA--------GTGGAAATGTACTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2519.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000001000000000000100000000000000000000000000000000000000000000000000000000000000000003000000000000000000000010000000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCATCGCATACGGAACGTGCTGAC2615.0050000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................TGAGA--GC---------------GGGA--------GTGGAAATGTAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAAACTCGAATGGATCGCATCGC.................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCGCATCGCATACGGAACGTGCT...2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................A--------GTGGAAATGTACTCTGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000010000
................................................................GAGA--GC---------------GGGA--------GTGGAAATGTACTCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000
.................................................................................................................................................................................................................................................AAGAAGAGGGCATGTTTTG......................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAATGGATCGCATCGCATACGGAACG.......2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TGAGA--GC---------------GGGA--------GTGGAAATGTACTCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................TGTGAGA--GC---------------GGGA--------GTGGAAATGTACTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000
........................................................................................................................AGTATACTTT-----CGTAGTGAG-----TA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
........................................................................................GGA--------GTGGAAATGTACTCTGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................GTGGAAATGTACTCTGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000
.....GGAGAA--------C--------------------------CTGAAA--------GTGTGAGA--GC---------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................C--------------------------CTGAAA--------GTGTGAGA--GC---------------GGGA--------GTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................ATACTTT-----CGTAGTGAG-----TAAGTGAGAGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTC------------------TGTATCAATAACATACATAA....................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................GTAGTGAG-----TAAGTGAGAGTGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAATCGGATTTTA------TAAAGAAATAAAC........................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TGGAAATGTACTCTGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GAGA--GC---------------GGGA--------GTGGAAATGTACTCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCACAAAAACTCGAATGGATCGCA.....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................ATTTGCGAATAAGAAGAGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCGCATCGCATACGGAAC........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TAGTGAG-----TAAGTGAGAGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................................................CTGAGCTAAAATATGCG-AGACCCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................GTGGAAATGTACTCTGACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTAGAAATCGGATTTTA------TAAAG................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TAAGAAGAGGGCATGTTTTGT----A----AATA........................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................GA--GC---------------GGGA--------GTGGAAATGTACTCTGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................AAGAAGAGGGCATGTTTTGT----.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................GGGCATGTTTTGT----A----AATA........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................CAA-----TGCTTCGTTTTAGTAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGCATCGCATACGGAACGTGCT...2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GTACTCTGACGTAAGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GAGTGGAGAA--------C--------------------------CTGAAA--------GTGTGAGA--....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................TGAGA--GC---------------GGGA--------GTGGAAATGTACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCGGATTTTA------TAAAGA...............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................AGA--GC---------------GGGA--------GTGGAAATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
....TGGAGAA--------C--------------------------CTGAAA--------GTGTGAGA--GC---------------G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAAACTCGAATGGATCGC......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...................................................A--------GTGTGAGA--GC---------------GGGA--------GTGGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCATCGCATACGGAACGTGC....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGGATCGCATCGCATACGGAACG.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GAGTGGAGAA--------C--------------------------CTGAAA--------GTGTGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGTTC------------------TGTATCAATAACATACATA.....................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................GCGAATAAGAAGAGGGCATG...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGACACCCACAAAAACTCGAATGG...........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGAGTGGAGAA--------C--------------------------CTGAAA--------GTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGGATCGCATCGCATACGGAACGT......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................GA--GC---------------GGGA--------GTGGAAATGTACTCTGACAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................C---------------GGGA--------GTGGAAATGTACTCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................AGTGAG-----TAAGTGAGAGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.........................................................................................................................................................................................................................................TTGCGAATAAGAAGAGGCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGAGTGGAGAA--------G--------------------------CTGAAA--------GCGCGAGA--GT---------------GGGA--------GTGGAAATGTACTCTGACGTAAGTAC--TTT-----CGTAGTGAG-----TAAGTGAGAGTGCAA-----TGATTCGCTT-AGTTAAATCTTTTGAAA-TTGTTATCTCTGAGCTAAAATATGCG-TGACT--TTTGGAAATCAGATGAGAACATGTTA-TC----A----AATATATA------AATGTACATAAATATG----AGGTGTTCATAATGTATCCG-------------------------TATAAAGATACAGTCACTAGCATATGCCAACACAACAATTTTATTTAAAAACAAT-ATGAATTTAACAACAATTTTATTTAAAAACAATATGAATTTAACGTAAAGCTACCATAAACCCGAATCTTACTTTAAAGTT------------------GTTAGTTTCGAATGCGTTGCACCCTTAGCTCCAATATCA------TAACATAGCCTATAT-----------------AAAAGACTTAAACCATGATCCAATTACAGAATGACGACTCGCACGAAAATTCCAATGGATCGCAGCGCATCCGGAATGTGTTGACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTCGCACGAAAATTCCAATG............................2311.0011000000
...................................................................A--GT---------------GGGA--------GTGGAAATGTACTCTGACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
droYak3
AGAGTGGAGAA--------CCT--------GAGCG------------TGAAA--------GCGTGAGA--GT---------------GGGA--------GTGGAAATGTACTCTGACGTAAGTAC--TTT-----CGTAGTGAG-----TAAGTGAGAGTGCAA-----TGCTTCGATTGAGTTAAGTCTTTTGAAA-TTGTTATCTCTCAGCTGAAATGTGCGGAGAGCCTTTTGAGAATCAGATGAGGACATGTGC-GTTATTA----TATATACATACATATATGTACATAAA---------AGCGTTCATGATATATCCG-------------------------GACACAGATACAGTCACTAGCATATGCCAACACAACAATT-GAGTTAAAAACAAAAATGACAGTTCCT----------------ATAATATTTATTTAATG-----------------------------TAAAGTT------------------TTTAGTTTCGCATGTAATGCACTCTTAGCTTCA------------TAACTTAGCCTATAAATCTGACTTTA------AAAAGAAGTAAACCATGATGTCATTTCAGAATGACGACGCCCACGAGAGTTCAAATGGATCGCAGCGCATCCGCAACGTGCTGACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................G------------TGAAA--------GCGTGAGA--GT---------------GGGA--------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
droEug1
AGAGTCGGAA-AGAGCGAAT------------------CGCCACTGAT----------------GTGT--GA---------------GTGA--------GTGGAAATGTACTCTGACGTAAGTACT--TTT----TGTAGTGAG-----TAACTGGGAGGGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AGAGTGGCGA-AGAGCGCACCGCAGCACAGAA----------AC--CTGTA--------------TGT--GT---------------GAGA--------GAGGAAATGTACTCTGACGTAAGTACT--CTTTTCTCACAGTGAG-----CAACTGAAAGGCCAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CGTATCGCATA--------T----------GT----------GT--CTGTAT--------GTGTG------------------------------------AGAAATGTTCTCTGACGTAAGTACT--TTTATGTTATAGTGAG-----TACCTGAGCGGCGA------GACTGCGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AGAGTGGAGA-AG------------------AGCGGGACATTGTTTTT------------------GT--GT---------------GTGA--------GTGGAAATGTACTCTGACGTAAGTAC--TTT-----TGCAGTAAG-----TAAGTGAGAAAGCAGTACTATGATTCGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AGAGTGGAGA-AG------------------AGCGGGACTACATTTGT------------------GT--TT---------------GGGA--------GTGGAAATGTACTCTGACGTAAGTAC--TTT-----TACAGTGAGTAGAGTAAGTGAGAGGGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CGGGACCAAA---------------------TACCAATCTTTAT--CTG--------------TATGG--GT---------------GAGA--------GTGGAAATGTACTCTGACGTAAGTAC--TTT-----TACAGTGAG-----TAGCTGAGAGGGCAA-----CGCTTCGATA-------------CC----TCGATACCTTTG---------------------------------------------TTT-GT----TTTTAAA-----ATTCA--TATGTTGGTT----------A-------ATGAGATAC-CCTTTAAAAATTTAAACTGATATAATCTAAAAAGGTAA-----------------------------------------------------------------------------------------------------------------------------CTTTAAAAAGACTTTTTTTTTGT-----------G--GTACCCCCT--------------------------TCTTGGAATAGCTTTTAAAGAGCCCATCGAAACTGACCACAGACCAATTGCAGAATGACGACGGCCAGGAAAACTCGAATGGGATGCAGCGCATCCGGAACGTATTGACSizeHit CountTotal NormTotal
No Reads
droKik1
AGAGAAA-GCC--------A--------------------------TTGCGA--------GCC-AAAA--GA---------------GCCA--------GGGGACATGTACTCTGACGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
AGAGAGCG-TAAG------------------A--------------------CCAGGAAAGAG--A------CTAATTGTAGACGAAGAGAGCCTAACTGTACAAATGTACTCTGACGTAAGTACC--CTCT---C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................GAG--A------CTAATTGTAGACGAAGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
droBip1
AGAGAGCG-TGAG------------------G--------------------CCTGGAAAGAGCGA------CTATTTTTGGACGGAGAGAG-CTAACCGTAAAAATGTACTCTGAGGTAAGTACC--CTCT---C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
AAACAAC-GTA--------T--------------------------CTGTAT--------GTGTGAG-CAGT---------------ATAT--------ATAGAAATGTACTCTGACGTAAGTAGTCGGC-----C--TGAGAG------AGGTGAGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
AAACAAC-GTA--------T--------------------------CTGTAT--------GTGTGAG-CAGT---------------ATAT--------ATAGAAATGTACTCTGACGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
GGATGAGCAAA--------------------A------------------ACC--------CAAGAGA--GA---------------GACA--------TGTGAAATGTACTCTGACGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAACGTATACGTAACGTCCTGACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCAGCGCATACGTAACGTCTTGACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TGAGCGTG-TCGG------------------A------------------GA--GAGAGAGAGAGAGA--GA---------------GAGA--------GTGGGAGTGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................GAGAGAGAGA--GA---------------GAGA--------GTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101

Generated: 05/19/2015 at 04:00 AM