ID:dsi_25160 |
Coordinate:2r:5647949-5648098 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
Antisense to exon [2r_5647809_5648002_-]; Antisense to exon [2r_5647809_5648002_-]; Antisense to five_prime_UTR [2r_5647809_5648002_-]; Antisense to five_prime_UTR [2r_5647809_5648002_-]
No Repeatable elements found
|
AATTTGGCGAGCAAATGAAAACCAAGAAAACTAAACGATCTAGAACGCATGTGAGTAGCGGGCGAGTGCGAAAGGGACGCGACACTAGAGATGAGACTTCGAGAGACTGCGATAGTATCAATCGACGGGAACTTGCGTGCTGCGAGAGTTAGCAGGGGTATTCTTTATACTTCATATTCTTAAAAAACCAACGAAAACTTTGAGCGTTAAAACGAAGTTTCCTTACTTCAAATTTTTATTGCATTTCCAA
**************************************************....((((((.(((((((((.......)))................((((((..((.(((....)))))..)))).))..)))))).))))))((((((.....(((((((.....)))))))..))))))...................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR902009 testis |
SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
GSM343915 embryo |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................CTAAACGATCTAGAACGCATG....................................................................................................................................................................................................... | 21 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ............................................................GTCGAGTGCGAAAGGGA............................................................................................................................................................................. | 17 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................CGGGCCAGTGCGAACGGG.............................................................................................................................................................................. | 18 | 2 | 5 | 0.20 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ................................................................................GACAGTAGAGATGAG........................................................................................................................................................... | 15 | 1 | 6 | 0.17 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...................................CGATGAAGAACGCATGTG..................................................................................................................................................................................................... | 18 | 2 | 11 | 0.09 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ................................................................................................................................................................................................GAATACTTTCAGCGTTAAC....................................... | 19 | 3 | 19 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ...........................................................................................................................................................................................CAAACGAGAACTTTGAG.............................................. | 17 | 2 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ########################################################################################################-------------------------------------------------------------------------------------------------------------------------------------------------- TTAAACCGCTCGTTTACTTTTGGTTCTTTTGATTTGCTAGATCTTGCGTACACTCATCGCCCGCTCACGCTTTCCCTGCGCTGTGATCTCTACTCTGAAGCTCTCTGACGCTATCATAGTTAGCTGCCCTTGAACGCACGACGCTCTCAATCGTCCCCATAAGAAATATGAAGTATAAGAATTTTTTGGTTGCTTTTGAAACTCGCAATTTTGCTTCAAAGGAATGAAGTTTAAAAATAACGTAAAGGTT **************************************************....((((((.(((((((((.......)))................((((((..((.(((....)))))..)))).))..)))))).))))))((((((.....(((((((.....)))))))..))))))...................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M023 head |
SRR553487 NRT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
SRR902009 testis |
SRR553488 RT_0-2 hours eggs |
M053 female body |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................TTTGATTTGCTAGATCTTGCG.......................................................................................................................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...................TTGGTTCTTTTGATTTGCTAGATCTT............................................................................................................................................................................................................. | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................................................................................................................................ATTTTGCTTCAAAGG............................ | 15 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TTCCCTGCGCTGTGA.................................................................................................................................................................... | 15 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................................................................................TGGTTGATTCTGAAACTCGCGAT......................................... | 23 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................TCTTTTGATTTGCTAGATCTTG............................................................................................................................................................................................................ | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................TTGCTAGATCTTGCGTACACT.................................................................................................................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................................................................................................................................ATTTTGCCTCAAAGGGAT......................... | 18 | 2 | 7 | 0.86 | 6 | 0 | 5 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...............................................................................................................................................................................................................ATTTTGCCTCAAAGG............................ | 15 | 1 | 6 | 0.83 | 5 | 0 | 0 | 3 | 0 | 0 | 2 | 0 | 0 |
| ............................................................................................................................................................................................................GAAATTTTGCCTCAAAGGGAT......................... | 21 | 3 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................................TAGTTACTTGCCCTTGAATG.................................................................................................................. | 20 | 3 | 3 | 0.33 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ............................................................................................................................................................................................................GAAATTTTGCCTCAAAGG............................ | 18 | 2 | 7 | 0.14 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................................................................AGAATTATCTGGTTGCCTTT..................................................... | 20 | 3 | 8 | 0.13 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................................................................................................AATTTTGCCTCAAAG............................. | 15 | 1 | 12 | 0.08 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...............................................................................................................................................................................................................ATTTTGCCTCAAAGGGA.......................... | 17 | 2 | 19 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| ...........................................................................................................................................................................................................TGAAATTTTGCCTCAAAGG............................ | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .............................................................................................................................................................................................................AAATTTTGCCTCAAAGG............................ | 17 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
Generated: 04/23/2015 at 08:38 PM