dsi_25115

exon [3r_26197463_26197860_-]; five_prime_UTR [3r_26197463_26197860_-]; intron [3r_26195747_26197462_-]

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- AAGTGGGCAAAGCGGAATAGGAAACAAGTAAAATAAGAAAACAAGCCACGGTAAGTGCGGAATTTGTTCCACTGTGCGTTCAAGTTTCCCTTCTCCACCCGCTATCGGCTGTTTCTTATCAGCCCCGTTATTCGCAGTGCATTCGTGGAGTGCCGTTACTTTTCGGAGGCCATTAGCGTTTGACAATTAATAGCAAGTTTCCTTCCCCTTCTGAGGTTTCCCCGTTGATTTTGCTCTGGTTTTCCATTCC ************************************************(((((((.(((.....))))))).))).......................(((((.(((((........)))))..((((..((((((((.((((.((((((....)))))).)))).)).))).)))..)))).....)))))......************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR902009 testis	SRR553486 Makindu_3 day-old ovaries	SRR553488 RT_0-2 hours eggs	SRR618934 dsim w501 ovaries	SRR553485 Chicharo_3 day-old ovaries	M025 embryo
.................TAGGAAACAAGTAAAATAAGAAAACAAGC............................................................................................................................................................................................................	29	0	1	2.00	2	2	0	0	0	0	0
...............................................ACGGTAAGTGCGGAATTTGT.......................................................................................................................................................................................	20	0	1	1.00	1	1	0	0	0	0	0
AAGTGGGCAGGGCGGAATAGG.....................................................................................................................................................................................................................................	21	2	1	1.00	1	1	0	0	0	0	0
..GTGGGCAAAGCGGAATAGGAA...................................................................................................................................................................................................................................	21	0	1	1.00	1	0	0	1	0	0	0
...............................................ACGGTAAGTGCGGAATTTGTTT.....................................................................................................................................................................................	22	1	1	1.00	1	1	0	0	0	0	0
.AGTGGGCAAAGCGGAATAGGA....................................................................................................................................................................................................................................	21	0	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................GTAGATTTTGCTCTGG...........	16	1	2	0.50	1	0	1	0	0	0	0
..................................................................................................................................................................................................................CTGAGGATTCCCCGTT........................	16	1	4	0.25	1	0	1	0	0	0	0
..................................................................................................CCGCTATCGGCTGAAT........................................................................................................................................	16	2	20	0.10	2	0	0	0	2	0	0
................ATAGTAAACAAGTAAA..........................................................................................................................................................................................................................	16	1	13	0.08	1	0	0	0	0	1	0
.......................................................................................................ATCGGCTGTTTCTTG....................................................................................................................................	15	1	14	0.07	1	0	0	0	0	1	0
.AGTGCGCAAAGCGGAA.........................................................................................................................................................................................................................................	16	1	16	0.06	1	0	0	0	1	0	0
....................................................................................................................................CGCAGTCCATTTGTGGACTG..................................................................................................	20	3	17	0.06	1	0	0	0	0	0	1
........................................................................................................TCGGCTGTCTCTTATG..................................................................................................................................	16	2	20	0.05	1	0	1	0	0	0	0

TTCACCCGTTTCGCCTTATCCTTTGTTCATTTTATTCTTTTGTTCGGTGCCATTCACGCCTTAAACAAGGTGACACGCAAGTTCAAAGGGAAGAGGTGGGCGATAGCCGACAAAGAATAGTCGGGGCAATAAGCGTCACGTAAGCACCTCACGGCAATGAAAAGCCTCCGGTAATCGCAAACTGTTAATTATCGTTCAAAGGAAGGGGAAGACTCCAAAGGGGCAACTAAAACGAGACCAAAAGGTAAGG ************************************************(((((((.(((.....))))))).))).......................(((((.(((((........)))))..((((..((((((((.((((.((((((....)))))).)))).)).))).)))..)))).....)))))......************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553486 Makindu_3 day-old ovaries	SRR553487 NRT_0-2 hours eggs	SRR553488 RT_0-2 hours eggs	GSM343915 embryo	SRR553485 Chicharo_3 day-old ovaries	SRR618934 dsim w501 ovaries	M053 female body	M024 male body	M025 embryo	O001 Testis	SRR902009 testis
........................................................................................................................................................................................................................AAAGGGGCGACTAAAACG................	18	1	3	10.33	31	30	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................AGGGGCGACTAAAACG................	16	1	10	7.50	75	70	3	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................AAGGGGCGACTAAAACG................	17	1	4	6.25	25	25	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................AAAGGGGCGACTAAAAC.................	17	1	5	5.60	28	12	15	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................AAGGGGCGACTAAAAC.................	16	1	6	5.33	32	10	6	15	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................................AAAGGGGCGACTAAGACG................	18	2	11	3.18	35	15	12	3	0	0	0	2	2	0	1	0
..........................................................................................................................................................................................................................AGGGGCGACTAAAAC.................	15	1	20	2.90	58	35	12	11	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................AAGGGGCGACTAAGACG................	17	2	20	1.50	30	0	25	5	0	0	0	0	0	0	0	0
........................................................................................................................................................GGCAATGAGAAGCCTCC.................................................................................	17	1	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................CGCCACCTAAGCACGTCACGGCAA.............................................................................................	24	3	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
......................................................................................................................................GTCACGAAAGGGCCTCACGGCAA.............................................................................................	23	3	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
.......................................................................................................................................................AGGCAATGATAAGCCTCC.................................................................................	18	2	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.............................................................TAAACAAGGTGACACGCAAGT........................................................................................................................................................................	21	0	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
......................................................................................................................................GTCACTTAAGTACCTCACGGTAA.............................................................................................	23	3	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................GAAAGGGGCAACTAAGACG................	19	2	3	0.67	2	0	2	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................AAAGGGGCGACTAAAACGG...............	19	2	11	0.64	7	7	0	0	0	0	0	0	0	0	0	0
...ATCCGTTTCGCCTTATCC.....................................................................................................................................................................................................................................	18	1	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................AGGTGATCCGCAAGTTCA.....................................................................................................................................................................	18	2	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................GGCTATGAAAAGCCTC..................................................................................	16	1	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................AAAGGGGCGACTAAGAC.................	17	2	20	0.35	7	4	0	2	0	1	0	0	0	0	0	0
..................................................................................................GGCGCAAGGCGACAAAGAATA...................................................................................................................................	21	3	3	0.33	1	0	0	0	0	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................AAGGGGCGACTAAAACGG...............	18	2	18	0.28	5	5	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................GGCAATGATAATCCTCC.................................................................................	17	2	4	0.25	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................GCCGACACAGACTAGTCAGG.............................................................................................................................	20	3	5	0.20	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................AGGCAATGAGAATCCTCCG................................................................................	19	3	6	0.17	1	0	0	1	0	0	0	0	0	0	0	0
...................................................................AGGAGATCCGCAAGTTCAAA...................................................................................................................................................................	20	3	6	0.17	1	0	0	1	0	0	0	0	0	0	0	0
...................................................................AGGAGATCCGCAAGTTCAA....................................................................................................................................................................	19	3	20	0.15	3	0	3	0	0	0	0	0	0	0	0	0
............................................................................................................................................CAAGCACCTCAAGGCAATAA..........................................................................................	20	3	7	0.14	1	0	0	0	0	0	0	0	1	0	0	0
..............................................................................................GCAAGGCGATAGCCGACAAA........................................................................................................................................	20	3	8	0.13	1	0	0	0	0	0	1	0	0	0	0	0
.................................................................................................AGGCGATAGCCGACTAA........................................................................................................................................	17	2	8	0.13	1	0	0	0	0	0	1	0	0	0	0	0
..........................................................................................................................................................................................................................................AGACCAAAAGGTACGG	16	1	9	0.11	1	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................................AAAGGGGCTACTAAGAC.................	17	2	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
.......................................................................GTCACGCAAGTTCACAGG.................................................................................................................................................................	18	2	11	0.09	1	0	0	0	0	0	0	0	0	1	0	0
..........................................................................................................................................................................................................................AGGGGCCACTAAAAC.................	15	1	12	0.08	1	1	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................GGGGCCACTAAAACG................	15	1	12	0.08	1	1	0	0	0	0	0	0	0	0	0	0
...............................................................ACCATGGTGAGACGCAAGT........................................................................................................................................................................	19	3	17	0.06	1	1	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................GGCTATGAAAAGCGTCC.................................................................................	17	2	19	0.05	1	0	0	0	0	0	0	0	0	0	0	1
...............................................................................................GTAGGCGATAGCCGACTTA........................................................................................................................................	19	3	20	0.05	1	0	0	0	0	0	1	0	0	0	0	0

Species	Coordinate	ID	Alignment
droSim2	3r:26197263-26197512 -	dsi_25115	AAGTGGGCAAAGCGG--------------------AA---TAGGAAACAAGTAAAA-TAA----------------------------------GAAAACAAGCCA--C-GGTAAGT----------------------------------------G------------------------------------CG-GAATTTGTTCCACTGTGCGT--TCA-AGTTTCCC-TTCTCCACCCGC---TATCGGCTGTTTCTTATCA-----G-CCCCGTTATTCG---CAGTGCATTCG--TGGAG--TGCCGTTACTTTTC-----------------------------GGAGGCCATTAGCGTTT--------------------GACAATTAATAGC-------AAG-----------------TTT-CCTT----CC----CCTTCTGAGGTTTCCCCGTTGATTTTGC------TCTGGTTT-------TCCAT-------------TC----C--------------------
droSec2	scaffold_4:5710418-5710667 -		AAGTGGGCAAAGCGG--------------------AA---TAGGAAACAAGTAAAA-TAA----------------------------------GAAAACAAGCCA--C-GGTAAGT----------------------------------------G------------------------------------CG-GAATTTGTTCCACTGTGCGT--TCA-AGTTACCC-TTCTCCACCCGC---TATCGGCTGTTTCTTATCA-----G-CCCCGTTATTCG---CAGTGCATTCG--TGGAG--TGCCGTTAGTTTTC-----------------------------GGAGGCCAATAGCGTTT--------------------GACAATTAATTGC-------AAG-----------------TTT-CCTT----CC----CCTTCTGAGGTTTCCCCGTTGAATTTGC------TCTGGTTT-------TCCAT-------------TC----C--------------------
dm3	chr3R:26885894-26886147 -		AAGTGGGCAAAGCGG--------------------AA---TAGGAAACAAGGAATA-TAAG---------------------------------AAAAACAAGCCA--C-GGTAAGT----------------------------------------G------------------------------------CG-GAATTTGTTCCACTGTGCGT--TCA-AGTTTCCC-TTCTCCACCCGC---TATCGGCTGCTCCTTATCA-----G-CCCCGTTATTCG---CAGTGCATTCG--TGGAG--TGCCGTTAGTTTTC-----------------------------GGAGGCCATTAGCGTTT--------------------GACAATTAATTGC-------AAG-----------------TTT-CCTT----CC----CCTTCTGAGGTTTCCCCGTTGGTTTTGC------TCTGGTTTTTG----GTTTT-------------TC----C--------------------
droEre2	scaffold_4820:1096276-1096541 +		AAGTGGGCAAAGCGG--------------------TA---TAAGAAATAAGGAAAA-TAAG---------------------------------GAAAACTAGCCA--A-GGTAAGT----------------------------------------G------------------------------------TG-AAATTCATTCCACTGTACGT--TCA-AGTTTCCC-TTTCCCACCCGCTTTTATCGGCTGCTCCTTATCA-----G-CCCCGTTATTCG---CAGTGCAGTCA--TGGAG--TACCGTTAGTTTTC-----------------------------GGAGGCCATTAACGTTT--------------------GACAATTAAATGC-------AAGCATA---CTG--TCAAGTTT-TCTT----CC----TTTTTTGAGGTTTCCCCGTTGATTTTCC------AAATGTTT-------TCTTT-------------TC----C--------------------
droYak3	3R:27825354-27825620 -		AAGTGGGCAAAGCGG--------------------AA---TAAGAATCAAGGAAAA-TAAG---------------------------------GAAAAGAAGCCA--C-GGTAAGT----------------------------------------G------------------------------------TG-GATTTCGTTCCACTGTACGT--TCA-AGTTTCCC-TTTTCCACCCGCTTTTATCGACTGCTCCTTATCA-----G-ACCCGTTATTCG---CAATGCATTTG--TGGAG--TGCCGTTAGTTTTC-----------------------------GGAGGCCATTAACGTTT--------------------GAAAATTAAATGC-------AAGCATA---CTG--TCAAGTTT-TCTT----CCT---TTTTCTGAGGTTTTCCCGTTGATTTGGC------AAATGTTT-------TCTTT-------------TT----C--------------------
droEug1	scf7180000409166:149499-149782 +		AAGTGGGCAAAGCAGAGCAG---------------AA---TAAGAAAAAAGGAA-A-TAG----------------------------------GAAAATAAGCCAATA-AGTAAGT----------------------------------------G------------------------------------TC-GAATTTGCTCCACTGTATGCTTTCT-TGACTCCC-TTTTCAACCCGCCTTTATCGGCTGCACCTTATCA-----G-CCCCGTTATTCG---CAGTGCATTTA--AAGAG--TGCCGTTAGTTTTC-----------------------------GGAGGCCATTGACGTTG--------------------AAAAATAAATTGC-------AAACATAGAACCG--TTTTCTTT-T-----TT--------------GGTTTCCCTGCTGATTT-GTTAATTTCCAGGTTTTTCGTTTTATTTTCTGTGT------TA----T--------------------
droBia1	scf7180000302113:433691-433981 +		AAGTGGGCAAAGCGG--------------------AA---CCAGAAATAAGGAAAA-TCGGAA--------------------------------AACATACGCCA--G-GGTAAGTGCGGGCGGGGAGTGCTAGTTGGCTCCACTGTAGCGAGGAAC------------------------------------TC-GAGTTTGCCCCACTGTATGTTTGCG-CGTCTCCC-TCGTCCACCCGCCTTTATCGGTCGCCCCTTATCA-----G-CCCCGTTATTCG---CAGTGCATTGG--GAGAG--CGCCGTTAGTTTTC-----------------------------GGAGGCCATTGACGTTG--------------------GAAAATTAATTGC-------AAACATAGAACTG--CCAAGCTT-T-----TTGTTTTTCCGCTTGAGGTTTC-------------------------------------CTG-------------TC----A--------------------
droTak1	scf7180000415236:227533-227838 -		CAGCGAGCAAAGCGG--------------------AA---TAAGAAATAAGGAAAA-CGGAAT--------------------------------AAAATAAGCCA--A-GGTGAGT----------------------------------------GAATTTCAATTTAAAAAAAGCTAAATTTCAAAAAACAGT-TAATTTGCCCCACTGTATGTTTTCC-CGTCTCCC-TTCCCCACCCGCCTTTATCGGCTGCTCCTTATCA-----G-CCCCGTTATTCG---CAGTGCATTTGAAGAGAG--TGCCGTTAGTTTTC-----------------------------GGAGGCCATTGACGTTG--------------------GAAAATTAATTGC-------AAACATAGAACTG--TCGAGCTTTTCTTTTCTGTT---GTTTTTGAGGTTTCCCCGTCGA----------------GTTT-------TTCTT-------------TT----T--------------------
droEle1	scf7180000491194:870575-870840 -		AAGTGGGCAACGTAGA--AG---------------AA---TAA--AA------------------------------------------------TAATTAAGCCA--A-GGTAAGT----------------------------------------T------------------------------------AGGAAATTTGTCCCACTGTATTT--TTA-TGTCTTTC-TTTTCCACCCGCCTTTATCGGCTGTTCCTTATCA-----G-CCCCGTTATTCG---CGGTGCATT-G--GAGAG--GGCCGTTAGTTTTC-----------------------------GGAGGCCATTGACGCTG--------------------GAAAACTAATTAC-------AAACATAGAATTG--TCAATTTG-C-TT----GGA---CTATTTCAGTTTTCCCTAACG------------------TTC-------TTTTT-------------TTATTGCAAATAAAA--ATTGTATATT
droRho1	scf7180000779488:906166-906431 -		AAGTGG-CAACTCAGA--AG---------------AA---TAAGAAA----------------------------------------------------TAAGTCA--A-GGTAAGT----------------------------------------C------------------------------------TC-AAATTTGTCCCACTGTATTT--TTA-TTTCTCCT-CTTTTCACCCGCTTTTATCGGCTGTTTCTTATCA-----G-TCCCGTTATTCG---CAGTGCATTTG---GAAG--TCCAGTTAGTTTTC-----------------------------GGAGGCCATTGACGTTC--------------------GAAAATTAATTAA-------AAACA--AAAGTG--TCATTTTG-T-----TTGGA---TTATTTAAGTTTTTCCTTTTGTTTTTTT------GCTAATTTT------TTGAT-------------TG----CCAACAAAAAAAATGT-----
droFic1	scf7180000453782:414312-414579 +		AAGTGGGCAACGCAG--------------------AA---TAAGAAATAGGAAAAA-T------------------------------------------TTGCCGAGAAGGTAAGT----------------------------------------G------------------------------------GC-TAGTTTGACCCACAGTATTT--CTTGGTTTTCCC-TTTTCCACCCGCCTTTATCGGATATTGCTTATCA-----G-CCCCGTTATTCG---CAGTGCATTTG--GAGAG--TACCGTTAGTTTTT-----------------------G-----GGAGGCCATTGACGTTT--------------------CTAAGCTAGTTGC-------AAACATACAGCTG--TCAGATTT-T-----TCGGT---TTGTCAGAAGCTGCCCTGTTTG----------------GTTT-------TATTTTTCGTGTAATATTAA----T--------------------
droKik1	scf7180000302238:100791-101021 -		CAGTGGTAAAGGAAGTG--G---------------AA---AG-----AGAGGAGTAACTGA---------------------------------AAAAAGAAAACA--A-GGTAAGA----------------------------------------T------------------------------------TC-AAATTTGTCCCACTGTT--T--TCG-GTTTTTCT-TTTCACACTC---------------CCCTTATCA-----GGCCCCGTTACTCGTT-GAGTGCAGT-G---CAAG--TGCCGTTAGTTTTC-----------------------------GGAGGCCATTGACGTCG--------------------CTAAATTAATTGC-------AAATATAGAATTG--TTTATTTT-T-----CC--------------GATTTCCGTTTTTAT----------------TTT-------GGCGT-------------TT----T--------------------
droAna3	scaffold_12911:4038268-4038536 +		AGTAGAGCAGCGCAGCGCAG--------------------C--GACGCCAGCAGAG-CCGCAGCAGCGACGCCAGCAGATCAGGAGTGGAAGCCGAAA--TTGCCGAAA-GGTAAAA----------------------------------------A------------------------------AAAAAATC-TTTTTTGTCCCACTGTATTT--T-------TCCC-TT-----------GTTATCTGCTCCCTCTTATCA-----C-TGCCGTTATTCGCTGCAGTGCATCTG---GAAGTGCCCCGTTACACTAC-----------------------CG---CCGGGGCCATTGACGTTGC-------------------GAAAATTAATTGC-------AAACATAGAATTG--TTATA----------------------------TTAGCCAGTTGGTTG-------------------------GGTT-------------CT----G--------------------
droBip1	scf7180000396640:886037-886257 +		CAGCGACGCCAGCAG--------------------AT---CAGGA-----GTGGAA-GCC----------------------------------GAAACCCTCGAA--A-GGTAAAA----------------------------------------A------------------------------------TC-CGTTTTGTGCCACTGTATTTCTTTT-TGTATTTT-TTT---TTGTG---TTATCTGCTCCCTCTTATCA-----C-TGCCGTTATTCGCTGCAGTGCATCTGGAAAGAG--CCCCGTTACATTAC-----------------------AG---CCGAGGCCATTGACGTTGC-------------------GAAAATTAATTGC-------AAACATAGAATTG--TTA---------------------------------------------------------------------TATTA-------------GC----C--------------------
dp5	2:260038-260350 +		AGGCAGCAGCAGCGACGCAGCAGCAGTGGAAGTGCAAGTGCA-------AGTAGCAGCGG------------------GACGAA-----------CGGGATAGCCA--A-GGTAGGC----------------------------------------G------------------------------------CC---------------------------AATAGCCCCTGCCACACT-TC---TCT----CCCTCCTTATCATAGTCG-TTTCGTTGTTTGT--CAGTGCATTTG--T--TT--TGCCGTTAGTTGTGCGGTCGTCCTCGAGCTTCACCATCGGCCGCGAGGCCATTGACTGCGACGCCGACATCAGCGACTCATAAAATGAATTACTAAAAAAAAACATAGAAAAATGTTTTTGTA------------------AGCAATGCATTGCAATTGTTTTTGC------GTTTTTTA-------TGGCG-------------CC----C--------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

AAGTGGGCAAAGCGG--------------------AA---TAGGAAACAAGTAAAA-TAA----------------------------------GAAAACAAGCCA--C-GGTAAGT----------------------------------------G------------------------------------CG-GAATTTGTTCCACTGTGCGT--TCA-AGTTTCCC-TTCTCCACCCGC---TATCGGCTGTTTCTTATCA-----G-CCCCGTTATTCG---CAGTGCATTCG--TGGAG--TGCCGTTACTTTTC-----------------------------GGAGGCCATTAGCGTTT--------------------GACAATTAATAGC-------AAG-----------------TTT-CCTT----CC----CCTTCTGAGGTTTCCCCGTTGATTTTGC------TCTGGTTT-------TCCAT-------------TC----C--------------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
........................................TAGGAAACAAGTAAAA-TAA----------------------------------GAAAACAAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................	29	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
.........................................................................................................A--C-GGTAAGT----------------------------------------G------------------------------------CG-GAATTTGT...............................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..GTGGGCAAAGCGG--------------------AA---TAGGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.........................................................................................................A--C-GGTAAGT----------------------------------------G------------------------------------CG-GAATTTGTTT.............................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.AGTGGGCAAAGCGG--------------------AA---TAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................ATCGGCTGTTTCTTG.....................................................................................................................................................................................................................................................................................	15	14	0.07	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0

droSec2

AAGTGGGCAAAGCGG--------------------AA---TAGGAAACAAGTAAAA-TAA----------------------------------GAAAACAAGCCA--C-GGTAAGT----------------------------------------G------------------------------------CG-GAATTTGTTCCACTGTGCGT--TCA-AGTTACCC-TTCTCCACCCGC---TATCGGCTGTTTCTTATCA-----G-CCCCGTTATTCG---CAGTGCATTCG--TGGAG--TGCCGTTAGTTTTC-----------------------------GGAGGCCAATAGCGTTT--------------------GACAATTAATTGC-------AAG-----------------TTT-CCTT----CC----CCTTCTGAGGTTTCCCCGTTGAATTTGC------TCTGGTTT-------TCCAT-------------TC----C--------------------	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.......................................................................................................................................................................................................................................................................................TATTCG---CAGTGCATTCG--TGGA...........................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0

dm3

AAGTGGGCAAAGCGG--------------------AA---TAGGAAACAAGGAATA-TAAG---------------------------------AAAAACAAGCCA--C-GGTAAGT----------------------------------------G------------------------------------CG-GAATTTGTTCCACTGTGCGT--TCA-AGTTTCCC-TTCTCCACCCGC---TATCGGCTGCTCCTTATCA-----G-CCCCGTTATTCG---CAGTGCATTCG--TGGAG--TGCCGTTAGTTTTC-----------------------------GGAGGCCATTAGCGTTT--------------------GACAATTAATTGC-------AAG-----------------TTT-CCTT----CC----CCTTCTGAGGTTTCCCCGTTGGTTTTGC------TCTGGTTTTTG----GTTTT-------------TC----C--------------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
......GCAAAGCGG--------------------AA---TAGGAAACAAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AAGTGGGCAAAGCGG--------------------AA---TAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............G--------------------AA---TAGGAAACAAGGAATA-TAAG---------------------------------AA............................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................GGTAAGT----------------------------------------G------------------------------------CG-GAATTTGTTC.............................................................................................................................................................................................................................................................................................................................................	20	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TGGGCAAAGCGG--------------------AA---TAGGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........AGCGG--------------------AA---TAGGAAACAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.........AAGCGG--------------------AA---TAGGAAACAAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........AGCGG--------------------AA---TAGGAAACAAGGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................CGTTAGTTTTC-----------------------------GGAGGCC......................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.AGTGGGCAAAGCGG--------------------AA---TAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.AGTGGGCAAAGCGG--------------------AA---TAGGAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................A-TAAG---------------------------------AAAAACAAGCCA--C-G.............................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
.............................................AACAAGGAATA-TAAG---------------------------------AAAAACAAGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

AAGTGGGCAAAGCGG--------------------TA---TAAGAAATAAGGAAAA-TAAG---------------------------------GAAAACTAGCCA--A-GGTAAGT----------------------------------------G------------------------------------TG-AAATTCATTCCACTGTACGT--TCA-AGTTTCCC-TTTCCCACCCGCTTTTATCGGCTGCTCCTTATCA-----G-CCCCGTTATTCG---CAGTGCAGTCA--TGGAG--TACCGTTAGTTTTC-----------------------------GGAGGCCATTAACGTTT--------------------GACAATTAAATGC-------AAGCATA---CTG--TCAAGTTT-TCTT----CC----TTTTTTGAGGTTTCCCCGTTGATTTTCC------AAATGTTT-------TCTTT-------------TC----C--------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
....................................A---TAAGAAATAAGGAAAA-TAAG---------------------------------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................CCGCTTTTATCGGCTGCTCCTTATC...................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0

droYak3

AAGTGGGCAAAGCGG--------------------AA---TAAGAATCAAGGAAAA-TAAG---------------------------------GAAAAGAAGCCA--C-GGTAAGT----------------------------------------G------------------------------------TG-GATTTCGTTCCACTGTACGT--TCA-AGTTTCCC-TTTTCCACCCGCTTTTATCGACTGCTCCTTATCA-----G-ACCCGTTATTCG---CAATGCATTTG--TGGAG--TGCCGTTAGTTTTC-----------------------------GGAGGCCATTAACGTTT--------------------GAAAATTAAATGC-------AAGCATA---CTG--TCAAGTTT-TCTT----CCT---TTTTCTGAGGTTTTCCCGTTGATTTGGC------AAATGTTT-------TCTTT-------------TT----C--------------------	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.......................................................................................................................................................................................................................................................TATCGACTGCTCCTTATCA-----G-ACCC.......................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................AGGAAAA-TAAG---------------------------------GAAAAGAAGCCA--................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

AAGTGGGCAAAGCAGAGCAG---------------AA---TAAGAAAAAAGGAA-A-TAG----------------------------------GAAAATAAGCCAATA-AGTAAGT----------------------------------------G------------------------------------TC-GAATTTGCTCCACTGTATGCTTTCT-TGACTCCC-TTTTCAACCCGCCTTTATCGGCTGCACCTTATCA-----G-CCCCGTTATTCG---CAGTGCATTTA--AAGAG--TGCCGTTAGTTTTC-----------------------------GGAGGCCATTGACGTTG--------------------AAAAATAAATTGC-------AAACATAGAACCG--TTTTCTTT-T-----TT--------------GGTTTCCCTGCTGATTT-GTTAATTTCCAGGTTTTTCGTTTTATTTTCTGTGT------TA----T--------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

AAGTGGGCAAAGCGG--------------------AA---CCAGAAATAAGGAAAA-TCGGAA--------------------------------AACATACGCCA--G-GGTAAGTGCGGGCGGGGAGTGCTAGTTGGCTCCACTGTAGCGAGGAAC------------------------------------TC-GAGTTTGCCCCACTGTATGTTTGCG-CGTCTCCC-TCGTCCACCCGCCTTTATCGGTCGCCCCTTATCA-----G-CCCCGTTATTCG---CAGTGCATTGG--GAGAG--CGCCGTTAGTTTTC-----------------------------GGAGGCCATTGACGTTG--------------------GAAAATTAATTGC-------AAACATAGAACTG--CCAAGCTT-T-----TTGTTTTTCCGCTTGAGGTTTC-------------------------------------CTG-------------TC----A--------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CAGCGAGCAAAGCGG--------------------AA---TAAGAAATAAGGAAAA-CGGAAT--------------------------------AAAATAAGCCA--A-GGTGAGT----------------------------------------GAATTTCAATTTAAAAAAAGCTAAATTTCAAAAAACAGT-TAATTTGCCCCACTGTATGTTTTCC-CGTCTCCC-TTCCCCACCCGCCTTTATCGGCTGCTCCTTATCA-----G-CCCCGTTATTCG---CAGTGCATTTGAAGAGAG--TGCCGTTAGTTTTC-----------------------------GGAGGCCATTGACGTTG--------------------GAAAATTAATTGC-------AAACATAGAACTG--TCGAGCTTTTCTTTTCTGTT---GTTTTTGAGGTTTCCCCGTCGA----------------GTTT-------TTCTT-------------TT----T--------------------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AAGTGGGCAACGTAGA--AG---------------AA---TAA--AA------------------------------------------------TAATTAAGCCA--A-GGTAAGT----------------------------------------T------------------------------------AGGAAATTTGTCCCACTGTATTT--TTA-TGTCTTTC-TTTTCCACCCGCCTTTATCGGCTGTTCCTTATCA-----G-CCCCGTTATTCG---CGGTGCATT-G--GAGAG--GGCCGTTAGTTTTC-----------------------------GGAGGCCATTGACGCTG--------------------GAAAACTAATTAC-------AAACATAGAATTG--TCAATTTG-C-TT----GGA---CTATTTCAGTTTTCCCTAACG------------------TTC-------TTTTT-------------TTATTGCAAATAAAA--ATTGTATATT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

AAGTGG-CAACTCAGA--AG---------------AA---TAAGAAA----------------------------------------------------TAAGTCA--A-GGTAAGT----------------------------------------C------------------------------------TC-AAATTTGTCCCACTGTATTT--TTA-TTTCTCCT-CTTTTCACCCGCTTTTATCGGCTGTTTCTTATCA-----G-TCCCGTTATTCG---CAGTGCATTTG---GAAG--TCCAGTTAGTTTTC-----------------------------GGAGGCCATTGACGTTC--------------------GAAAATTAATTAA-------AAACA--AAAGTG--TCATTTTG-T-----TTGGA---TTATTTAAGTTTTTCCTTTTGTTTTTTT------GCTAATTTT------TTGAT-------------TG----CCAACAAAAAAAATGT-----	Size	Hit Count	Total Norm	Total
No Reads

droFic1

AAGTGGGCAACGCAG--------------------AA---TAAGAAATAGGAAAAA-T------------------------------------------TTGCCGAGAAGGTAAGT----------------------------------------G------------------------------------GC-TAGTTTGACCCACAGTATTT--CTTGGTTTTCCC-TTTTCCACCCGCCTTTATCGGATATTGCTTATCA-----G-CCCCGTTATTCG---CAGTGCATTTG--GAGAG--TACCGTTAGTTTTT-----------------------G-----GGAGGCCATTGACGTTT--------------------CTAAGCTAGTTGC-------AAACATACAGCTG--TCAGATTT-T-----TCGGT---TTGTCAGAAGCTGCCCTGTTTG----------------GTTT-------TATTTTTCGTGTAATATTAA----T--------------------	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CAGTGGTAAAGGAAGTG--G---------------AA---AG-----AGAGGAGTAACTGA---------------------------------AAAAAGAAAACA--A-GGTAAGA----------------------------------------T------------------------------------TC-AAATTTGTCCCACTGTT--T--TCG-GTTTTTCT-TTTCACACTC---------------CCCTTATCA-----GGCCCCGTTACTCGTT-GAGTGCAGT-G---CAAG--TGCCGTTAGTTTTC-----------------------------GGAGGCCATTGACGTCG--------------------CTAAATTAATTGC-------AAATATAGAATTG--TTTATTTT-T-----CC--------------GATTTCCGTTTTTAT----------------TTT-------GGCGT-------------TT----T--------------------	Size	Hit Count	Total Norm	Total
No Reads

droAna3

AGTAGAGCAGCGCAGCGCAG--------------------C--GACGCCAGCAGAG-CCGCAGCAGCGACGCCAGCAGATCAGGAGTGGAAGCCGAAA--TTGCCGAAA-GGTAAAA----------------------------------------A------------------------------AAAAAATC-TTTTTTGTCCCACTGTATTT--T-------TCCC-TT-----------GTTATCTGCTCCCTCTTATCA-----C-TGCCGTTATTCGCTGCAGTGCATCTG---GAAGTGCCCCGTTACACTAC-----------------------CG---CCGGGGCCATTGACGTTGC-------------------GAAAATTAATTGC-------AAACATAGAATTG--TTATA----------------------------TTAGCCAGTTGGTTG-------------------------GGTT-------------CT----G--------------------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
......................................................................GCCAGCAGATCAGGAGTGGAAGCCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.............................................................AGCAGCGACGCCAGCAGATCAGGAGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
..............GCGCAG--------------------C--GACGCCAGCAGAG-C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
...........................................GACGCCAGCAGAG-CCGCAGCAGCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
......................................................................GCCAGCAGATCAGGAGTGGAAGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
.GTAGAGCAGCGCAGCGCAG--------------------C--.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0
..........................................................................GCAGATCAGGAGTGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0
.............................................................................GATCAGGAGTGGAAGCCGAAA--........................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
..TAGAGCAGCGCAGCGCAG--------------------C--GA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
..................................................GCAGAG-CCGCAGCAGCGACGCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
...............CGCAG--------------------C--GACGCCAGCAGAG-CC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
...........................................................GCAGCAGCGACGCCAGCAGATCAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................C-TT-----------GTTATCTGCTCCCTCTTA.....................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
.................CAG--------------------C--GACGCCAGCAGAG-CCGCAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
................................................................................CAGGAGTGGAAGCCGAAA--TTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
......GCAGCGCAGCGCAG--------------------C--GAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	7	0.14	1	0	1	0	0	0	0

droBip1

CAGCGACGCCAGCAG--------------------AT---CAGGA-----GTGGAA-GCC----------------------------------GAAACCCTCGAA--A-GGTAAAA----------------------------------------A------------------------------------TC-CGTTTTGTGCCACTGTATTTCTTTT-TGTATTTT-TTT---TTGTG---TTATCTGCTCCCTCTTATCA-----C-TGCCGTTATTCGCTGCAGTGCATCTGGAAAGAG--CCCCGTTACATTAC-----------------------AG---CCGAGGCCATTGACGTTGC-------------------GAAAATTAATTGC-------AAACATAGAATTG--TTA---------------------------------------------------------------------TATTA-------------GC----C--------------------	Size	Hit Count	Total Norm	Total
No Reads

dp5

AGGCAGCAGCAGCGACGCAGCAGCAGTGGAAGTGCAAGTGCA-------AGTAGCAGCGG------------------GACGAA-----------CGGGATAGCCA--A-GGTAGGC----------------------------------------G------------------------------------CC---------------------------AATAGCCCCTGCCACACT-TC---TCT----CCCTCCTTATCATAGTCG-TTTCGTTGTTTGT--CAGTGCATTTG--T--TT--TGCCGTTAGTTGTGCGGTCGTCCTCGAGCTTCACCATCGGCCGCGAGGCCATTGACTGCGACGCCGACATCAGCGACTCATAAAATGAATTACTAAAAAAAAACATAGAAAAATGTTTTTGTA------------------AGCAATGCATTGCAATTGTTTTTGC------GTTTTTTA-------TGGCG-------------CC----C--------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.......................................GCA-------AGTAGCAGCGG------------------GACGAA-----------CGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................AGTGCAAGTGCA-------AGTAGCAGCGG------------------GA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.......................................GCA-------AGTAGCAGCGG------------------GACGAA-----------CG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................CAGCAGCAGTGGAAGTGCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.....................................................GCAGCGG------------------GACGAA-----------CGGGATAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................CAAGTGCA-------AGTAGCAGCGG------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......AGCAGCGACGCAGCAGCAGTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................GTTAGTTGTGCGGTCGTCCTCGAGCTTC........................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........AGCGACGCAGCAGCAGTGGAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................CAGCGG------------------GACGAA-----------CGGGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................GAA-----------CGGGATAGCCA--A-GGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..GCAGCAGCAGCGACGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0

dsi_25115

3r:26197313-26197462 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads