ID:

dsi_25095

 Coordinate:

3l:21485018-21485078 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [3l_21485079_21485186_+]; CDS [3l_21485079_21485186_+]; exon [3l_21484877_21485017_+]; CDS [3l_21484877_21485017_+]; intron [3l_21485018_21485078_+]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------##################################################
TCATGTCGCTGTCCATGCGGGAGACCCTGAACCCAAAAGATAGCAAAGAGGTATCTGCTGGAATTAGCCAAGTTTGAGCATAAACTCAAATGTTTTGCTATCCCAAATTAGTTCGACGGCGCCACGCTGGAACCGCGAGCGGCGGCTGCGGTGGGTCAGTC
**************************************************.........(((..((((...(((((((......))))))).....)))))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 O001
Testis
 SRR1275485
Male prepupae		 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 SRR902009
testis
TCATATCGCAGTCCATGCGG............................................................................................................................................. 20 2 3 28.00 84 4 71 0 1 8 0 0 0 0 0 0 0
............................................AAAGAGGCTTCTGATGGAATT................................................................................................ 21 3 4 20.75 83 0 0 72 0 0 9 0 0 0 2 0 0
..ATGTCGCAGTCCATGCGG............................................................................................................................................. 18 1 1 7.00 7 4 1 0 0 2 0 0 0 0 0 0 0
..........GTCCATGCGGGAGACCCTGAACCCAAAA........................................................................................................................... 28 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
.CATGTCGCTGTCCATGCGGGAGACCCT..................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
TCATGTCGCAGTCCATGCTG............................................................................................................................................. 20 2 2 2.00 4 0 4 0 0 0 0 0 0 0 0 0 0
...............TGCGGGAGACCCTGAACC................................................................................................................................ 18 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0
...................GGAGACCCTGAACCCAAAAG.......................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.CATGTCGCTGTCCATGCGG............................................................................................................................................. 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................GTTCGACGGCGCCACGCTG................................ 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
GCATGTCGCAGTCCATGCGG............................................................................................................................................. 20 2 2 1.50 3 1 1 0 0 1 0 0 0 0 0 0 0
..ATATCGCGGTCCATGCGG............................................................................................................................................. 18 2 4 1.50 6 0 2 0 0 4 0 0 0 0 0 0 0
...........................................................................................................AGAGTTCGACGGCGCCACGCTGGAACCGC......................... 29 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.............CATGCGGGAGACCCTGAACCCA.............................................................................................................................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................CTACGGCGCCACGCTGGAACCGC......................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................GTTCGACGGCGCCACGCTGGAACC........................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ACGCTGGAACCGCGAGCGGCGGCT.............. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................GAGACCCTGAACCCAAAAGATAGC..................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........TCCATGCGGGAGACCCTGAACCCA.............................................................................................................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..........GTCCATGCGGGAGACCCTGAACCCAAAAG.......................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................GGAGACCCTGAACCCAAAAGATAGC..................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............CATGCGGGAGACCCTGAACCCAAAAG.......................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................CCTGAACCCAAAAGATAGCAAAGAGTT............................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............ATGCGGGAGACCCTGAACC................................................................................................................................ 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................GTTCGACGGCGCCACGCTGGAACCGCGA....................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.............CATGCGGGAGACCCTGAACCCAAAA........................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........GTCCATGCGGGAGACCCTGAACCC............................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........TCCATGCGGGAGACCCTGAACCCAAAA........................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
....................GAGACCCTGAACCCAAAAG.......................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................ATGTTTTGCTATCCCAAATTAGTT................................................ 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................GCCACGCTGGAACCGCGAGC..................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
........CTGTCCATGCGGGAGACCCTGAACCCA.............................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................AGCAAAGAGGTATCTGCTGGAATT................................................................................................ 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................GTTCGACGGCGCCACGCTGGAACCGC......................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
........CTGTCCATGCGGGAGACCCTGAACCC............................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......GCTGTCCATGCGGGAGACCCTGAACCC............................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................GACGGCGCCACGCTGGAACCGCGAGC..................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............CCATGCGGGAGACCCTGAACCCACA............................................................................................................................ 25 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..........GTCCATGCGGGAGACCCTGAACC................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................CGACGGCGCCACGCTGGAACCGC......................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................CGCTGGAACCGCGAGCGGC.................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................CCCAAAAGATAGCAAAGA................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................CGACGGCGCCACGCTGGAACC........................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..................GGGAGACCCTGAACCCAAA............................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................GCGGGAGACCCTGAACCC............................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ACGCTGGAACCGCGAGCGGCGGCC.............. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................GAGTTCGACGGCGCCACGCTGGAA............................. 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............CCATGCGGGAGACCCTGAACCCAA............................................................................................................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..ATGTCGCTGTCCATGCGGGA........................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.......GCTGTCCATGCGGGAGACCCTGAACCCA.............................................................................................................................. 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
....ATCGCAGTCCATGCGGGAGA......................................................................................................................................... 20 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................AAGAGGCTTCTGATGGAATT................................................................................................ 20 3 10 0.40 4 0 0 4 0 0 0 0 0 0 0 0 0
............................................AAAGAGGCTTCTGATGGAAT................................................................................................. 20 3 8 0.38 3 0 0 2 0 0 1 0 0 0 0 0 0
.....................ATACCCTGAACCCAAAAGGT........................................................................................................................ 20 2 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0
TCATATCGCTGTCCATGCTG............................................................................................................................................. 20 2 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0
TCATATCGCAGTCCATGTGG............................................................................................................................................. 20 3 6 0.33 2 0 2 0 0 0 0 0 0 0 0 0 0
..GTGTCGCAGTCCATGCGG............................................................................................................................................. 18 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTAGTGCGATGGCGCCA..................................... 17 2 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................TAGTTTGACGGCGCTTCGC.................................. 19 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1 0
..AAGTCGCAGTCCATGCGG............................................................................................................................................. 18 2 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................AGTTCGACTGCGCCA..................................... 15 1 11 0.09 1 0 0 0 0 0 0 1 0 0 0 0 0
GCATGTCGCAGGCCATGCGG............................................................................................................................................. 20 3 15 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0
..ATGTCGCAGTCCATGCTGAA........................................................................................................................................... 20 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 1
.....TCGCAGTCCATGCGG............................................................................................................................................. 15 1 16 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................GCTGCGGTAGTTCAGT. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
.....TCGCTGTCCATGCTG............................................................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

AGTACAGCGACAGGTACGCCCTCTGGGACTTGGGTTTTCTATCGTTTCTCCATAGACGACCTTAATCGGTTCAAACTCGTATTTGAGTTTACAAAACGATAGGGTTTAATCAAGCTGCCGCGGTGCGACCTTGGCGCTCGCCGCCGACGCCACCCAGTCAG
**************************************************.........(((..((((...(((((((......))))))).....)))))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
...................................................................................................................TGCCGCGGAGCGACGTTG............................ 18 2 2 0.50 1 1 0 0
.............................................................TGACTCGGTTCAAACTTGTATTTG............................................................................ 24 3 7 0.29 2 0 2 0
............................................TTTCTCCGAAGACTACCTTAA................................................................................................ 21 3 4 0.25 1 0 1 0
.....AGCGAGAGGTAGGCCCTCTCG....................................................................................................................................... 21 3 4 0.25 1 1 0 0
........................................................................AGACTCCTATTTGAGTT........................................................................ 17 2 19 0.05 1 1 0 0
..................................................................................TTGAGTTTACAAAGC................................................................ 15 1 20 0.05 1 0 0 1
................................................TCCAGAGACGGCCTTA................................................................................................. 16 2 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:21484968-21485128 + dsi_25095 TCATGTCGCTGTCCATGCGGGAGACCCTGAACCCAAAAGATAGCAAAGAGGTAT-------------------------------------CT------GCT-GGAA-TTAGCCAAGTTT------------G-AG---------------------------------------------------------------------------C--------ATAAACTC-AAATGT-TTTGCT-AT-------CCCAAATTAGTTCGACGGCGCCACGCTGGAACCGCGAGCGGCGGCTGCGGTGGGTCAGTC
droSec2 scaffold_11:1895363-1895523 + dse_780 TCATGTCGCTTTCCATGCGCGAGACCCTGAACCCAAAAGATAGCAAAGAGGTAT-------------------------------------CT------GCT-GGAA-TTAGCCAAGTTT------------G-AG---------------------------------------------------------------------------C--------ATAAACTC-AAATGT-TTTGCT-AT-------CCCAAATTAGTTCGACGGCGCCACGCTGGAACCGCGAGCGGCGGCTGCGGTGGGTCAGTC
dm3 chr3L:21969775-21969935 + TCATGTCGCTGTCCATGCGCGAGACACTAAACCCAAAAGATAGCAAAGAGGTAT-------------------------------------CT------GCT-GGAA-TTAGCCAAGTTT------------G-AG---------------------------------------------------------------------------C--------ATAAACTC-AAATGT-TTTGCT-AT-------CCCAAATTAGTTTGACGGCGCTACGCTGGAACCGCGAGCAGCGGCTGCGGTGGGTCAGTC
droEre2 scaffold_4784:21644634-21644795 + TCATGTCGCTGTCCATGCGCGAGACCCTGAACCCAAAAGACAGCAAGGAGGTAT-------------------------------------CT------GCT-GGAA-TTGGCCAAGTTT------------G-CG---------------------------------------------------------------------------G--------GAATATTC-AAATGT-TTTGCTCCT-------TCCCAATTAGTTCGACGGCGCCACGCTGGAGCCGCGAGCGGCGGCTGCGGTGGGTCAGTC
droYak3 v2_chr3L_random_302:5906-6066 + TCATGTCCCTGTCCATGCGCGAGACCCTGAACCCAAAGGATAGCAAAGAGGTAT-------------------------------------CT------GTT-GAAA-TAAGCCAAGCTT------------G-AG---------------------------------------------------------------------------C--------GTGTACTC-ACATGC-TTTGCT-AT-------CCCAAATTAGTTCGACGGTGCCACGCTGGAGCCGCGAGCGGCGGCTGCGGTGGGTCAGTC
droEug1 scf7180000409472:805253-805416 + TCATGTCCCTGTCGATGCGAGAGACTCTCAACCCGAAGGACAGCAAAGAGGTAG-------------------------------------CT---ACT--TAGTAT-CTAGCTAAGTTT------------TAAG---------------------------------------------------------------------------C--------TC-TAACCCAAATGT-TTTGCT-CT-------CCGAAATTAGTTCGATGGCGCCACTCTGGAACCACGAGCGGCGGCTGCGGTTGGCCAGTC
droBia1 scf7180000302377:1314408-1314569 - TGATGTCGCTGTCGATGCGCGAGACCCTCAACCCAAAGGACAGCAAAGAGGTAG-------------------------------------CT------GCT-GAAG-TAAGCCCAGTTC------------CTAG---------------------------------------------------------------------------A--------CCCTAACC-CAATGC-TTTCCT-CT-------TCGAAATTAGTTCGATGGCGCCACGCTGGAACCACGAGCGGCGGCTGCAGTGGGTCAGTC
droTak1 scf7180000414002:117811-117972 + TGATGTCGCTGTCGATGCGCGAGACCCTCAACCCGAAGGACAGCAAAGAGGTAG-------------------------------------CT------GGT-GGAG-TAAGCCAAGTTC------------TGAG---------------------------------------------------------------------------C--------TCATAATC-CAATGT-TTTCCC-CT-------TCCAAACTAGTTCGATGGCGCCACTCTGGAACCACGAGCGGCGGCTGCGGTGGGTCAGTC
droEle1 scf7180000491199:865124-865282 - TCATGTCGCTGTCGATGCGTGAGACCCTCAACCCAAAGGACAGCAAAGAGGTAG-------------------------------------CT------GCC-GGAA-TAAGCCAGGTTT--------------AG---------------------------------------------------------------------------C--------AC-TAACC-GACTTT-TTTGAT-CT-------CCGAAATTAGTTCGATGGCGCCACACTGGAACCGCGAGCTGCGGCTGCGGTGGGTCAGTC
droRho1 scf7180000759602:18684-18848 + TCATGTCGCTGTCGATGCGCGAGACCCTCAATCCGAAGGACAGCAAAGAGGTAG-------------------------------------CC---GCTGCT-AGAA-TAAGCCAAGTTT------------GTAG---------------------------------------------------------------------------C--------TCTCAACC-GACAAT-TTTGCT-CT-------CCGAAATTAGTTCGATGGCGCCACGCTGGAACCGCGGGCGGCGGCTGCGGTGGGTCAGTC
droFic1 scf7180000453945:126032-126190 + TCATGTCGCTGTCGATGCGCGAGACCCTCAACCCGAAGGACAGCAAGGAGGTAG-------------------------------------TA------GCT-GGAG-AACGCCAGATCT------------G-AA---------------------------------------------------------------------------C--------CTCTAACC-GAATGC-T-TGCT--T-------CCCAAAACAGTTCGAAGGCGCCTCGCTGGAGCCGCGAGCGGCGGCTGCGGTGGGTCAGTC
droKik1 scf7180000302441:2093447-2093625 - TCATGTCCCTCTCGATGCGCGAGACCCTCAATCCCAAGGACAGTAAAGAGGTAGC--------CCAGATTA-------------------GTT------GCC-GGAA-GTGGCCGAAAGT------------G-TGACT--CGA------------------------------------------------------------------ATC-------TC-TAACCCGAAACT-TCCACT-CT-------CCATAATTAGTTCGATGGCGCCACCCTGGAACCGCGAGCAGCGGCTGCGGTGGGTCAATC
droAna3 scaffold_13337:21103271-21103445 + TCATGTCGCTGTCGATGCGAGAGACCCTCAACCCGAAGGACAGCAAAGAGGTAC---------------------------------ATAGCT---GT-GCG-GGAA-T-ATTCAAGTTT------------G-GC--CCACTA------------------------------------------------------------------ATCCA--TGATC-TAACC---AC-CTTTCACT--C-------CCGAAATTAGTTTGACGGCGCCACTCTGGAACCACGAGCGGCGGCTGCGGTGGGTCAGTC
droBip1 scf7180000396707:326917-327088 - TAATGTCGCTGTCGATGCGAGAGACCCTCAACCCTAAGGACAGCAAGGAGGTAC---------------------------------CCAGCT---GA-GCT-GGAA-AAA-CCAAAACC------------A-AC------CA------------------C-----------------------------------------------ACCCA--TGATC-TAACC---AC-CTCTCACT--C-------CCGAAATTAGTTCGACGGCGCCACTCTGGAACCGCGAGCGGCAGCTGCGGTGGGTCAGTC
dp5 XR_group8:6042814-6042982 + TCATGTCGCTGTCAATGCGCGAGACTCTCAACCCCAAGGACAGCAAGGAGGTGAGCATACTAA------------------------TCAGCC---GCG----G-AG-A--------------------------C----ACTA------------------------------------------------------------------ATCCACTCAGT------------CT-TCCCCC-GTCCCTACCACAAAAATAGTTCGATGGCGCCACCCTGGAACCACGTGCAGCGGCTGCGGTGGGTCAATC
droPer2 scaffold_45:441174-441343 - TCATGTCGCTGTCAATGCGCGAGACTCTCAACCCGAAGGACAGCAAGGAGGTGAGCACACTAA------------------------TCAGCC---GCG----G-AG-A--------------------------C---AACTA------------------------------------------------------------------ATCCACTCAGT------------CT-TCGCCC-ATCCCTACCACAAAAATAGTTCGAAGGCGCCACCCTGGAACCGCGTGCAGCGGCTGCGGTGGGTCAATC
droWil2 scf2_1100000004762:1847502-1847741 - TCATGTCCCTTTCCATGCGTGAGACTCTTAATCCCAAGGACAGCAAAGAGGTTAC--------CTTCGCGCAATTGCACATCATACA---ATTTCAATT--CA-ACATT----------TCTT------------C------CTTTCCCCCCCTCTATGTCCCTCTCTTGCACTTTCTCTCTCTGCCTCTCTGCCTGTCACTCGCTTTGTAT--------CTCT-ACG-CAATG--------------------CTTATTAGTTCGATGGCGCCACACTGGAACCACGTGCGGCTGCTGCGGTGGGTCAGTC
droVir3 scaffold_13049:20936394-20936557 + TGATGTCGCTGTCGATGCGCGAAACACTAAACCCCAAGGACACCAAAGAGGTGAT--------ACATACACACTG-------CAAT-----CTGCTATT--TA-GAGTT----------TCACACTAAGCTTG-AG-------------------------------------------------------------------------------------------------------GCT-AT-------TC---ATTAGTTCGATGGCGCCACATTGGAGCCACGCGCGGCGGCTGCGGTGGGTCAATC
droMoj3 scaffold_6680:15289491-15289663 + TCATGTCGCTGTCGATGCGTGAGACGTTGAATCCAAAGGACACCAAAGAGGTGAT--------ACACACATATATACACACAAGATA---ACTGCTATT--TA-GAGTT----------TAGCACTAAGGTTG--------------------------------------------------------------------------------------------------------TGGCT-AT-------TC---AATAGTTCGATGGCGCCACACTGGAGCCACGTGCAGCTGCTGCGGTGGGTCAGTC
droGri2 scaffold_15110:22763160-22763327 - TCATGTCGTTGTCGATGCGCGAAACGCTGAATCCGAAGGACACCAAGGAGGTGAT--------ACATACACATACACA----AAATA---A--GCAATT--TA-AAGTT----------TCACACTAAGCTGC--------------------------------------------------------------------------------------------------------TGGCT-AT-------TTC--ATTAGTTCGATGGCGCCACGTTGGAGCCACGTGCGGCTGCTGCGGTGGGTCAATC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCATGTCGCTGTCCATGCGGGAGACCCTGAACCCAAAAGATAGCAAAGAGGTAT-------------------------------------CT------GCT-GGAA-TTAGCCAAGTTT------------G-AG---------------------------------------------------------------------------C--------ATAAACTC-AAATGT-TTTGCT-AT-------CCCAAATTAGTTCGACGGCGCCACGCTGGAACCGCGAGCGGCGGCTGCGGTGGGTCAGTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........GTCCATGCGGGAGACCCTGAACCCAAAA..................................................................................................................................................................................................................................................................................2814.00404000000000000000
.CATGTCGCTGTCCATGCGGGAGACCCT............................................................................................................................................................................................................................................................................................2712.00202000000000000000
...............TGCGGGAGACCCTGAACC.......................................................................................................................................................................................................................................................................................1812.00200200000000000000
...................GGAGACCCTGAACCCAAAAG.................................................................................................................................................................................................................................................................................2012.00202000000000000000
.CATGTCGCTGTCCATGCGG....................................................................................................................................................................................................................................................................................................1912.00202000000000000000
.....................................................................................................................................................................................................................................................................GTTCGACGGCGCCACGCTG................................1912.00202000000000000000
.............CATGCGGGAGACCCTGAACCCA.....................................................................................................................................................................................................................................................................................2211.00100100000000000000
.....................................................................................................................................................................................................................................................................GTTCGACGGCGCCACGCTGGAACC...........................2411.00101000000000000000
..................................................................................................................................................................................................................................................................................ACGCTGGAACCGCGAGCGGCGGCT..............2411.00101000000000000000
....................GAGACCCTGAACCCAAAAGATAGC............................................................................................................................................................................................................................................................................2411.00101000000000000000
...........TCCATGCGGGAGACCCTGAACCCA.....................................................................................................................................................................................................................................................................................2411.00100100000000000000
..........GTCCATGCGGGAGACCCTGAACCCAAAAG.................................................................................................................................................................................................................................................................................2911.00101000000000000000
...................GGAGACCCTGAACCCAAAAGATAGC............................................................................................................................................................................................................................................................................2511.00101000000000000000
.............CATGCGGGAGACCCTGAACCCAAAAG.................................................................................................................................................................................................................................................................................2611.00101000000000000000
..............ATGCGGGAGACCCTGAACC.......................................................................................................................................................................................................................................................................................1911.00100010000000000000
.....................................................................................................................................................................................................................................................................GTTCGACGGCGCCACGCTGGAACCGCGA.......................2811.00100010000000000000
.............CATGCGGGAGACCCTGAACCCAAAA..................................................................................................................................................................................................................................................................................2511.00101000000000000000
..........GTCCATGCGGGAGACCCTGAACCC......................................................................................................................................................................................................................................................................................2411.00101000000000000000
...........TCCATGCGGGAGACCCTGAACCCAAAA..................................................................................................................................................................................................................................................................................2711.00100010000000000000
....................GAGACCCTGAACCCAAAAG.................................................................................................................................................................................................................................................................................1911.00100010000000000000
.......................................................................................................................................................................................................................................ATGT-TTTGCT-AT-------CCCAAATTAGTT................................................2411.00100010000000000000
...............................................................................................................................................................................................................................................................................GCCACGCTGGAACCGCGAGC.....................2011.00100010000000000000
........CTGTCCATGCGGGAGACCCTGAACCCA.....................................................................................................................................................................................................................................................................................2711.00101000000000000000
.........................................AGCAAAGAGGTAT-------------------------------------CT------GCT-GGAA-TT..........................................................................................................................................................................................................2411.00100010000000000000
.....................................................................................................................................................................................................................................................................GTTCGACGGCGCCACGCTGGAACCGC.........................2611.00100010000000000000
........CTGTCCATGCGGGAGACCCTGAACCC......................................................................................................................................................................................................................................................................................2611.00101000000000000000
.......GCTGTCCATGCGGGAGACCCTGAACCC......................................................................................................................................................................................................................................................................................2711.00100100000000000000
.........................................................................................................................................................................................................................................................................GACGGCGCCACGCTGGAACCGCGAGC.....................2611.00100010000000000000
..........GTCCATGCGGGAGACCCTGAACC.......................................................................................................................................................................................................................................................................................2311.00101000000000000000
........................................................................................................................................................................................................................................................................CGACGGCGCCACGCTGGAACCGC.........................2311.00100010000000000000
...................................................................................................................................................................................................................................................................................CGCTGGAACCGCGAGCGGC..................1911.00101000000000000000
...............................CCCAAAAGATAGCAAAGA.......................................................................................................................................................................................................................................................................1811.00100001000000000000
........................................................................................................................................................................................................................................................................CGACGGCGCCACGCTGGAACC...........................2111.00100010000000000000
..................GGGAGACCCTGAACCCAAA...................................................................................................................................................................................................................................................................................1911.00101000000000000000
................GCGGGAGACCCTGAACCC......................................................................................................................................................................................................................................................................................1811.00101000000000000000
..................................................................................................................................................................................................................................................................................ACGCTGGAACCGCGAGCGGCGGCC..............2411.00101000000000000000
............CCATGCGGGAGACCCTGAACCCAA....................................................................................................................................................................................................................................................................................2411.00100100000000000000
..ATGTCGCTGTCCATGCGGGA..................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.......GCTGTCCATGCGGGAGACCCTGAACCCA.....................................................................................................................................................................................................................................................................................2811.00100000000000000010
droSec2
TCATGTCGCTTTCCATGCGCGAGACCCTGAACCCAAAAGATAGCAAAGAGGTAT-------------------------------------CT------GCT-GGAA-TTAGCCAAGTTT------------G-AG---------------------------------------------------------------------------C--------ATAAACTC-AAATGT-TTTGCT-AT-------CCCAAATTAGTTCGACGGCGCCACGCTGGAACCGCGAGCGGCGGCTGCGGTGGGTCAGTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......CGCTTTCCATGCGCGAGACCCT............................................................................................................................................................................................................................................................................................2211.0011000
....................................................................................................................................................................................................................................................................AGTTCGACGGCGCCACGCTG................................2011.0011000
....................................................................................................................................................................................................................................................................................GCTGGAACCGCGAGCGGCGGCTGCGGT.........2711.0010100
..................................................................................................................................................................................................................................................................................ACGCTGGAACCGCGAGCGGCGGCT..............2411.0010100
..................................................................................................................................................................................................................................................................................ACGCTGGAACCGCGAGCGGC..................2011.0010010
........................................................................................................................................................................................................................................................................CGACGGCGCCACGCTGGAACCGC.........................2311.0011000
..............ATGCGCGAGACCCTGAACCCA.....................................................................................................................................................................................................................................................................................2111.0010001
..........TTCCATGCGCGAGACCCTGAACC.......................................................................................................................................................................................................................................................................................2311.0010100
....................................................................................................................................................................................................................................................................................................GCGGCTGCGGTGGGTCAGT.1911.0010100
..................GCGAGACCCTGAACCCAAA...................................................................................................................................................................................................................................................................................1920.5011000
dm3
TCATGTCGCTGTCCATGCGCGAGACACTAAACCCAAAAGATAGCAAAGAGGTAT-------------------------------------CT------GCT-GGAA-TTAGCCAAGTTT------------G-AG---------------------------------------------------------------------------C--------ATAAACTC-AAATGT-TTTGCT-AT-------CCCAAATTAGTTTGACGGCGCTACGCTGGAACCGCGAGCAGCGGCTGCGGTGGGTCAGTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................GAGCAGCGGCTGCGGTGG.......1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................CAGCGGCTGCGGTGGGTC....1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000
........CTGTCCATGCGCGAGACA..............................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ACCCAAAAGATAGCAAAGA.......................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GCAGCGGCTGCGGTGGGT.....1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................GTTTGACGGCGCTACGCTGGAACCGCATC......................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................ACGCTGGAACCGCGAGCAGCGGCTGC............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CCAAAAGATAGCAAAGAG......................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CATGCGCGAGACACTAAA.........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TGGAACCGCGAGCAGCGGCTGCGGTGGGT.....2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................................................................................................................................................................................................................................TTGACGGCGCTACGCTGGAACCG..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................CCCAAATTAGTTTGACGGCG........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................................................................................................................................................................................................TGACGGCGCTACGCTGGAACCGCGAGC.....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................GGCGCTACGCTGGAACCGCGAGC.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................CAGCGGCTGCGGTGGGTCAGTC2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATGCGCGAGACACTAAACC.......................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GCTACGCTGGAACCGCGAG......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AGCAGCGGCTGCGGTGGGTCA...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AAACCCAAAAGATAGCAAAGAG......................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GCTGGAACCGCGAGCAGCGGCTG.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................................................................................................................................GTTTGACGGCGCTACGCTGGAACCGC.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GCTGGAACCGCGAGCAGCGGCTGC............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATGCGCGAGACACTAAACCC......................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAT-------------------------------------CT------GCT-GGAA-TTAGCCAAGT..................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................GAGCAGCGGCTGCGGTGGGTCA...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................................................................................................................................................................................................................................................CGCGAGCAGCGGCTGCGGT.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................GTTTGACGGCGCTACGCTGGAAC............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................GTTTGACGGCGCTACGCT.................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CTGGAACCGCGAGCAGCGGCTGC............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCTGTCCATGCGCGAGACACTA...........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CGAGCAGCGGCTGCGGTGG.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................................................................................................................GAGCAGCGGCTGCGGTGGGTG....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CATGTCGCTGTCCATGCGC....................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATGTCGCTGTCCATGCGCGAGA................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CTACGCTGGAACCGCGAG......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................CGCTGGAACCGCGAGCAGCGGCT..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TACGCTGGAACCGCGAGCAGCGGCTGC............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GACACTAAACCCAAAAGATAG.............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CTACGCTGGAACCGCGAGC.....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TTGACGGCGCTACGCTGGAACCGCATC......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................ACGCTGGAACCGCGAGCAGC..................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATGCGCGAGACACTAAACCCA.....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................GCGAGCAGCGGCTGCGGTG........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TTGACGGCGCTACGCTGGAACCGC.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TTTGACGGCGCTACGCTGGAACCGC.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CGAGCAGCGGCTGCGGTGGGTCC...2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................GGCGCTACGCTGGAACCGC.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCTGTCCATGCGCGAGACG..............................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
droEre2
TCATGTCGCTGTCCATGCGCGAGACCCTGAACCCAAAAGACAGCAAGGAGGTAT-------------------------------------CT------GCT-GGAA-TTGGCCAAGTTT------------G-CG---------------------------------------------------------------------------G--------GAATATTC-AAATGT-TTTGCTCCT-------TCCCAATTAGTTCGACGGCGCCACGCTGGAGCCGCGAGCGGCGGCTGCGGTGGGTCAGTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................................................................GCCACGCTGGAGCCGCGA.......................1813.0032000010
.............CATGCGCGAGACCCTGAACC.......................................................................................................................................................................................................................................................................................2012.0020000110
........................................................................................................................................................................................................................................................................CGACGGCGCCACGCTGGAGC............................2012.0021000010
.CATGTCGCTGTCCATGCGCGAGACCCTG...........................................................................................................................................................................................................................................................................................2811.0011000000
............................................................................................................................................................................................................................................................................................CGCGAGCGGCGGCTGCGGTGGGG.....2311.0010000010
....................................................AT-------------------------------------CT------GCT-GGAA-TTGGCCAAGT..................................................................................................................................................................................................2111.0010001000
.........................................................................................................................................................................................................................................................................GACGGCGCCACGCTGGAGC............................1911.0010000010
.............................AACCCAAAAGACAGCAAGG........................................................................................................................................................................................................................................................................1911.0010000100
............................................................................................................................................................................................................................................................................................CGCGAGCGGCGGCTGCGGTGGGT.....2311.0010000010
..................................................................................................................................................................................................................................................................................ACGCTGGAGCCGCGAGCGGC..................2011.0011000000
.................................................................................................................................................................................................................................................................................CACGCTGGAGCCGCGAGC.....................1811.0010000010
.......................................................................................................................................................................................................................................................................TCGACGGCGCCACGCTGGAGC............................2111.0010100000
...............TGCGCGAGACCCTGAACC.......................................................................................................................................................................................................................................................................................1811.0010000010
............................GAACCCAAAAGACAGCAAGGAGT.....................................................................................................................................................................................................................................................................2311.0010000010
............................................................................................................................................................................................................................................................................................CGCGAGCGGCGGCTGCGT..........1811.0011000000
...TGTCGCTGTCCATGCGCGAGA................................................................................................................................................................................................................................................................................................2111.0011000000
.......................................................................................................................................................................................................................................................................................GGAGCCGCGAGCGGCGGCTGCGGTGGGT.....2811.0010000010
..................GCGAGACCCTGAACCCAAAAGACAGC............................................................................................................................................................................................................................................................................2611.0011000000
........................................................................................................................................................................................................................................................................CGACGGCGCCACGCTGGAGCCGCGAGC.....................2711.0011000000
......................GACCCTGAACCCAAAAGACAGC............................................................................................................................................................................................................................................................................2211.0010010000
.....................................................................................................................................................................................................................................................................GTTCGACGGCGCCACGCTGG...............................2011.0010000010
......................................................................................................................................................................................................................................................................TTCGACGGCGCCACGCTGGAGC............................2211.0011000000
..........................................GCAAGGAGGTAT-------------------------------------CT------GCT-GGAA-TTGG........................................................................................................................................................................................................2511.0010000100
........................................................................................................................................................................................................................................................................CGACGGCGCCACGCTGGAGCCGCGAGCGGC..................3011.0010000100
droYak3
TCATGTCCCTGTCCATGCGCGAGACCCTGAACCCAAAGGATAGCAAAGAGGTAT-------------------------------------CT------GTT-GAAA-TAAGCCAAGCTT------------G-AG---------------------------------------------------------------------------C--------GTGTACTC-ACATGC-TTTGCT-AT-------CCCAAATTAGTTCGACGGTGCCACGCTGGAGCCGCGAGCGGCGGCTGCGGTGGGTCAGTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................GACGGTGCCACGCTGGAGC............................1921.00211000000000
......CCCTGTCCATGCGCGAGACCCTGAACCC......................................................................................................................................................................................................................................................................................2811.00101000000000
..........................CTGAACCCAAAGGATAGCAAAGAGGT....................................................................................................................................................................................................................................................................2611.00100000010000
.....................................................................................................................................................................................................................................................................GTTCGACGGTGCCACGCTGGAGCCGC.........................2621.00200000020000
.....................................................................................................................................................................................................................................................................GTTCGACGGTGCCACGCTGGAGC............................2321.00201010000000
.............................................................................................................................................................................................................................................................................................GCGAGCGGCGGCTGCGGTGG.......2021.00200000020000
.CATGTCCCTGTCCATGCGCGAGACCC.............................................................................................................................................................................................................................................................................................2611.00101000000000
..................GCGAGACCCTGAACCCAAAGGATAG.............................................................................................................................................................................................................................................................................2511.00101000000000
......CCCTGTCCATGCGCGAGACCCTG...........................................................................................................................................................................................................................................................................................2311.00101000000000
............................................................................................................................................................................................................................................................................................CGCGAGCGGCGGCTGCGGTGGGT.....2321.00201000010000
.....................................................................................................................................................................................................................................................................GTTCGACGGTGCCACGCTGG...............................2020.50110000000000
................................CCAAAGGATAGCAAAGAGT.....................................................................................................................................................................................................................................................................1920.50100000010000
.................................................................................................................................................................................................................................................................................................GCGGCGGCTGCGGTGGGT.....1820.50101000000000
.....................................................................................................................................................................................................................................................................GTTCGACGGTGCCACGCTGGAGCCG..........................2520.50101000000000
.........................................................................................................................................................................................................................................................................GACGGTGCCACGCTGGAGCCGCG........................2320.50100000010000
.....................................................................................................................................................................................................................................................................GTTCGACGGTGCCACGCTGGAG.............................2220.50101000000000
...............................................................................................................................................................................................................................................................................GCCACGCTGGAGCCGCGAGCGGC..................2320.50100000010000
....................................................................................................................................................................................................................................................................AGTTCGACGGTGCCACGCTGGAGCCG..........................2620.50100100000000
............................................................................................................................................................................................................................................................................................CGCGAGCGGCGGCTGCGGT.........1920.50101000000000
.......................................................................................................................................................................................................................................................................TCGACGGTGCCACGCTGGAGCC...........................2220.50101000000000
.........................................................................................................................................................................................................................................................................................AGCCGCGAGCGGCGGCTGCGGTGG.......2420.50101000000000
............................................................................................................................................................................................................................................................................................CGCGAGCGGCGGCTGCGGTG........2020.50101000000000
..............................................................................................................................................................................................................................................................................................CGAGCGGCGGCTGCGGTG........1820.50101000000000
............................................................................................................................................................................................................................................................................GGTGCCACGCTGGAGCCGCGA.......................2120.50101000000000
.........................................................................................................................................................................................................................................................................................AGCCGCGAGCGGCGGCTGCGGTG........2320.50101000000000
.............................................................................................................................................................................................................................................................................................GCGAGCGGCGGCTGCGGTG........1920.50101000000000
...........................................................................................................................................................................................................................................................................................CCGCGAGCGGCGGCTGCGGTGGGTC....2520.50100000010000
..................................................................................................................................................................................................................................................................................ACGCTGGAGCCGCGAGCGGCGG................2220.50100010000000
.............................AACCCAAAGGATAGCAAAGAG......................................................................................................................................................................................................................................................................2120.50100000010000
............................................................................................................................................................................................................................................................................................CGCGAGCGGCGGCTGCGGTGG.......2120.50100000010000
.................................................................................................................................................................................................................................................................................CACGCTGGAGCCGCGAGCGGCGGC...............2420.50100000010000
........................................................................................................AAA-TAAGCCAAGCTT------------G-AC---------------------------------------------------------------------------.....................................................................................................1830.33100000010000
droEug1
TCATGTCCCTGTCGATGCGAGAGACTCTCAACCCGAAGGACAGCAAAGAGGTAG-------------------------------------CT---ACT--TAGTAT-CTAGCTAAGTTT------------TAAG---------------------------------------------------------------------------C--------TC-TAACCCAAATGT-TTTGCT-CT-------CCGAAATTAGTTCGATGGCGCCACTCTGGAACCACGAGCGGCGGCTGCGGTTGGCCAGTCSizeHit CountTotal NormTotal
No Reads
droBia1
TGATGTCGCTGTCGATGCGCGAGACCCTCAACCCAAAGGACAGCAAAGAGGTAG-------------------------------------CT------GCT-GAAG-TAAGCCCAGTTC------------CTAG---------------------------------------------------------------------------A--------CCCTAACC-CAATGC-TTTCCT-CT-------TCGAAATTAGTTCGATGGCGCCACGCTGGAACCACGAGCGGCGGCTGCAGTGGGTCAGTCSizeHit CountTotal NormTotal
No Reads
droTak1
TGATGTCGCTGTCGATGCGCGAGACCCTCAACCCGAAGGACAGCAAAGAGGTAG-------------------------------------CT------GGT-GGAG-TAAGCCAAGTTC------------TGAG---------------------------------------------------------------------------C--------TCATAATC-CAATGT-TTTCCC-CT-------TCCAAACTAGTTCGATGGCGCCACTCTGGAACCACGAGCGGCGGCTGCGGTGGGTCAGTCSizeHit CountTotal NormTotal
No Reads
droEle1
TCATGTCGCTGTCGATGCGTGAGACCCTCAACCCAAAGGACAGCAAAGAGGTAG-------------------------------------CT------GCC-GGAA-TAAGCCAGGTTT--------------AG---------------------------------------------------------------------------C--------AC-TAACC-GACTTT-TTTGAT-CT-------CCGAAATTAGTTCGATGGCGCCACACTGGAACCGCGAGCTGCGGCTGCGGTGGGTCAGTCSizeHit CountTotal NormTotal
No Reads
droRho1
TCATGTCGCTGTCGATGCGCGAGACCCTCAATCCGAAGGACAGCAAAGAGGTAG-------------------------------------CC---GCTGCT-AGAA-TAAGCCAAGTTT------------GTAG---------------------------------------------------------------------------C--------TCTCAACC-GACAAT-TTTGCT-CT-------CCGAAATTAGTTCGATGGCGCCACGCTGGAACCGCGGGCGGCGGCTGCGGTGGGTCAGTCSizeHit CountTotal NormTotal
No Reads
droFic1
TCATGTCGCTGTCGATGCGCGAGACCCTCAACCCGAAGGACAGCAAGGAGGTAG-------------------------------------TA------GCT-GGAG-AACGCCAGATCT------------G-AA---------------------------------------------------------------------------C--------CTCTAACC-GAATGC-T-TGCT--T-------CCCAAAACAGTTCGAAGGCGCCTCGCTGGAGCCGCGAGCGGCGGCTGCGGTGGGTCAGTCSizeHit CountTotal NormTotal
No Reads
droKik1
TCATGTCCCTCTCGATGCGCGAGACCCTCAATCCCAAGGACAGTAAAGAGGTAGC--------CCAGATTA-------------------GTT------GCC-GGAA-GTGGCCGAAAGT------------G-TGACT--CGA------------------------------------------------------------------ATC-------TC-TAACCCGAAACT-TCCACT-CT-------CCATAATTAGTTCGATGGCGCCACCCTGGAACCGCGAGCAGCGGCTGCGGTGGGTCAATCSizeHit CountTotal NormTotal
No Reads
droAna3
TCATGTCGCTGTCGATGCGAGAGACCCTCAACCCGAAGGACAGCAAAGAGGTAC---------------------------------ATAGCT---GT-GCG-GGAA-T-ATTCAAGTTT------------G-GC--CCACTA------------------------------------------------------------------ATCCA--TGATC-TAACC---AC-CTTTCACT--C-------CCGAAATTAGTTTGACGGCGCCACTCTGGAACCACGAGCGGCGGCTGCGGTGGGTCAGTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................GCCACTCTGGAACCACGAGC.....................2011.001001000
.................................................................................................................................................................................................................................................................................CACTCTGGAACCACGAGCGGCGGCTGC............2711.001000010
..................GAGAGACCCTCAACCCGAAGGACAG.............................................................................................................................................................................................................................................................................2511.001010000
...............................CCCGAAGGACAGCAAAGAG......................................................................................................................................................................................................................................................................1911.001000001
.............GATGCGAGAGACCCTCAACCCGAA...................................................................................................................................................................................................................................................................................2411.001010000
............CGATGCGAGAGACCCTCAACCCGAAG..................................................................................................................................................................................................................................................................................2611.001000010
...............TGCGAGAGACCCTCAACCCGAAGGAC...............................................................................................................................................................................................................................................................................2611.001000001
......CGCTGTCGATGCGAGAGACCCTCAACCC......................................................................................................................................................................................................................................................................................2811.001000010
....................................................................................................................................................................................................................................................................AGTTTGACGGCGCCACTCTGGA..............................2211.001100000
.................CGAGAGACCCTCAACCCGAAGGAC...............................................................................................................................................................................................................................................................................2411.001001000
..........GTCGATGCGAGAGACCCTC...........................................................................................................................................................................................................................................................................................1911.001010000
....GTCGCTGTCGATGCGAGA..................................................................................................................................................................................................................................................................................................1811.001100000
.......GCTGTCGATGCGAGAGACCCT............................................................................................................................................................................................................................................................................................2111.001100000
...................AGAGACCCTCAACCCGAAGGACAGCA...........................................................................................................................................................................................................................................................................2611.001000001
droBip1
TAATGTCGCTGTCGATGCGAGAGACCCTCAACCCTAAGGACAGCAAGGAGGTAC---------------------------------CCAGCT---GA-GCT-GGAA-AAA-CCAAAACC------------A-AC------CA------------------C-----------------------------------------------ACCCA--TGATC-TAACC---AC-CTCTCACT--C-------CCGAAATTAGTTCGACGGCGCCACTCTGGAACCGCGAGCGGCAGCTGCGGTGGGTCAGTCSizeHit CountTotal NormTotal
No Reads
dp5
TCATGTCGCTGTCAATGCGCGAGACTCTCAACCCCAAGGACAGCAAGGAGGTGAGCATACTAA------------------------TCAGCC---GCG----G-AG-A--------------------------C----ACTA------------------------------------------------------------------ATCCACTCAGT------------CT-TCCCCC-GTCCCTACCACAAAAATAGTTCGATGGCGCCACCCTGGAACCACGTGCAGCGGCTGCGGTGGGTCAATCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................GATGGCGCCACCCTGGAAC............................1912.0020200000000
.....................................................................................................................................................................................................................................................................GTTCGATGGCGCCACCCTGGAAC............................2312.0020200000000
.CATGTCGCTGTCAATGCGC....................................................................................................................................................................................................................................................................................................1912.0020200000000
.............................AACCCCAAGGACAGCAAGG........................................................................................................................................................................................................................................................................1911.0010100000000
.........................................................................................................................................................................................................................................................................GATGGCGCCACCCTGGAACCA..........................2111.0010100000000
...............................CCCCAAGGACAGCAAGGAG......................................................................................................................................................................................................................................................................1911.0010100000000
..............................................................................................................................................................................................................................................................................................CGTGCAGCGGCTGCGGTGG.......1911.0010100000000
.....................................................................................................................................................................................................................................................................GTTCGATGGCGCCACCCTGGAACCA..........................2511.0010100000000
..........................................................................................................................................................................................................................................................................................ACCACGTGCAGCGGCTGCGGT.........2111.0010100000000
.....................................................................................................................................................................................................................................................................................CTGGAACCACGTGCAGCGGCTGCGGTG........2711.0010100000000
..............................................................................................................................................................................................................................................................................................CGTGCAGCGGCTGCGGTGGGT.....2111.0010100000000
...........................................................................................................................................................................................................................................................................TGGCGCCACCCTGGAACCACGT.......................2211.0010010000000
.......................ACTCTCAACCCCAAGGACAGCAAGGA.......................................................................................................................................................................................................................................................................2611.0010100000000
............................CAACCCCAAGGACAGCAAGGA.......................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................CACGTGCAGCGGCTGCGGTGGGT.....2311.0010100000000
..............................................................................................................................................................................................................................................................................................CGTGCAGCGGCTGCGGTG........1811.0010100000000
......................GACTCTCAACCCCAAGGAC...............................................................................................................................................................................................................................................................................1911.0010100000000
....................GAGACTCTCAACCCCAAGGA................................................................................................................................................................................................................................................................................2011.0010100000000
.....................AGACTCTCAACCCCAAGGACAGCAAGGA.......................................................................................................................................................................................................................................................................2811.0010100000000
.CATGTCGCTGTCAATGCGCGAGAC...............................................................................................................................................................................................................................................................................................2411.0010100000000
.............AATGCGCGAGACTCTCAACC.......................................................................................................................................................................................................................................................................................2011.0010000010000
..........................................................................................................................................................................................................................................................................ATGGCGCCACCCTGGAACCA..........................2011.0010100000000
..........................................................................................................................................................................................................................................................................................ACCACGTGCAGCGGCTGCGGTG........2211.0010100000000
............CAATGCGCGAGACTCTCAA.........................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
TCATGTCGCTGTCAATGCGCGAGACTCTCAACCCGAAGGACAGCAAGGAGGTGAGCACACTAA------------------------TCAGCC---GCG----G-AG-A--------------------------C---AACTA------------------------------------------------------------------ATCCACTCAGT------------CT-TCGCCC-ATCCCTACCACAAAAATAGTTCGAAGGCGCCACCCTGGAACCGCGTGCAGCGGCTGCGGTGGGTCAATCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............AATGCGCGAGACTCTCAACCCGAAGGA................................................................................................................................................................................................................................................................................2713.003300000
............CAATGCGCGAGACTCTCAACCCGAAGGAC...............................................................................................................................................................................................................................................................................2913.003300000
.................CGCGAGACTCTCAACCCGAAG..................................................................................................................................................................................................................................................................................2113.003300000
............CAATGCGCGAGACTCTCAACCCGAA...................................................................................................................................................................................................................................................................................2512.002200000
..................GCGAGACTCTCAACCCGG....................................................................................................................................................................................................................................................................................1811.001100000
..............ATGCGCGAGACTCTCAACCCGAAG..................................................................................................................................................................................................................................................................................2411.001100000
...............................CCCGAAGGACAGCAAGGAG......................................................................................................................................................................................................................................................................1911.001000010
.CATGTCGCTGTCAATGCGCGAGACTCT............................................................................................................................................................................................................................................................................................2711.001100000
............................................................................................................................................................................................................................................................................................CGCGTGCAGCGGCTGCGGTGGGGG....2411.001001000
............CAATGCGCGAGACTCTCAACCCGAAG..................................................................................................................................................................................................................................................................................2611.001100000
.......................ACTCTCAACCCGAAGGACAGC............................................................................................................................................................................................................................................................................2111.001010000
droWil2
TCATGTCCCTTTCCATGCGTGAGACTCTTAATCCCAAGGACAGCAAAGAGGTTAC--------CTTCGCGCAATTGCACATCATACA---ATTTCAATT--CA-ACATT----------TCTT------------C------CTTTCCCCCCCTCTATGTCCCTCTCTTGCACTTTCTCTCTCTGCCTCTCTGCCTGTCACTCGCTTTGTAT--------CTCT-ACG-CAATG--------------------CTTATTAGTTCGATGGCGCCACACTGGAACCACGTGCGGCTGCTGCGGTGGGTCAGTCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................CTCTTAATCCCAAGGACAGC............................................................................................................................................................................................................................................................................2013.00302010
...................................................................................................................................................................................................................................................................................................GGCTGCTGCGGTGGGTCAGTC2112.00200110
.................................................................................................................................................................................................................................................................................CACACTGGAACCACGTGCGGC..................2112.00200200
....................................................................................................................................................................................................................................................................................ACTGGAACCACGTGCGGCT.................1912.00211000
..........TTCCATGCGTGAGACTCTTAATCCC.....................................................................................................................................................................................................................................................................................2512.00210100
.................................................................................................................................................................................................................................................................................CACACTGGAACCACGTGCGGCTGCTG.............2612.00200110
..............................ATCCCAAGGACAGCAAAGA.......................................................................................................................................................................................................................................................................1911.00100100
...........................TTAATCCCAAGGACAGCAAAGAG......................................................................................................................................................................................................................................................................2311.00100001
............................TAATCCCAAGGACAGCAAAGA.......................................................................................................................................................................................................................................................................2111.00100100
.............................................................................................................................................................................................................................................................................................ACGTGCGGCTGCTGCGGTGG.......2011.00100010
.........................................................................................................................................................................................................................................................................................AACCACGTGCGGCTGCTGCG...........2011.00100010
..........................CTTAATCCCAAGGACAGCAAAGA.......................................................................................................................................................................................................................................................................2311.00100100
.....................................................................................................................................................................................................................................................................................................CTGCTGCGGTGGGTCAGTC1911.00100100
..........................................................................................................................................................................................................................................................................................ACCACGTGCGGCTGCTGC............1811.00100010
......................................................................................................................................................................................................................................................................................TGGAACCACGTGCGGCTGC...............1911.00100010
...............................................................................................................................................................................................................................................................................................GTGCGGCTGCTGCGGTGGGTCAGT.2411.00100010
...................................................................................................................................................................................................................................................................................CACTGGAACCACGTGCGGCTGC...............2211.00100100
.....................AGACTCTTAATCCCAAGGACAT.............................................................................................................................................................................................................................................................................2211.00100010
........................CTCTTAATCCCAAGGACAG.............................................................................................................................................................................................................................................................................1911.00101000
...............................TCCCAAGGACAGCAAAGAG......................................................................................................................................................................................................................................................................1911.00100100
............................................................................................................................................................................................................................................................................................CACGTGCGGCTGCTGCGGTGGGT.....2311.00100010
..............................ATCCCAAGGACAGCAAAGAGT.....................................................................................................................................................................................................................................................................2111.00100100
.................................................................................................................................................................................................................................................................................CACACTGGAACCACGTGCGGCTG................2311.00100100
.........TTTCCATGCGTGAGACTCTTAATCCC.....................................................................................................................................................................................................................................................................................2611.00110000
.....................................................................................................................................................................................................................................................................GTTCGATGGCGCCACACTGGAACCACGTG......................2911.00101000
.....................................................................................................................................................................................................................................................................GTTCGATGGCGCCACACTGGAAC............................2311.00101000
....................................................................................................................................................................................................................................................................................ACTGGAACCACGTGCGGCTGCTG.............2311.00100100
....................................................................................................................................................................................................................................................................................ACTGGAACCACGTGCGGCTGC...............2111.00100010
............................................................................................................................................................................................................................................................................................CACGTGCGGCTGCTGCGGTGGGTCAGTC2811.00100100
......................GACTCTTAATCCCAAGGACAGC............................................................................................................................................................................................................................................................................2211.00101000
.............................................................................................................................................................................................................................................................................................ACGTGCGGCTGCTGCGGTGGGT.....2211.00100010
..........................CTTAATCCCAAGGACAGCAAA.........................................................................................................................................................................................................................................................................2111.00100100
.................................................................................................................................................................................................................................................................................CACACTGGAACCACGTGCGGCTGC...............2411.00100010
..................................................................................................................................................................................................................................................................................ACACTGGAACCACGTGCGGCTGC...............2311.00100010
..........................................................................................................................................................................................................................................................................................ACCACGTGCGGCTGCTGCGGT.........2111.00100100
droVir3
TGATGTCGCTGTCGATGCGCGAAACACTAAACCCCAAGGACACCAAAGAGGTGAT--------ACATACACACTG-------CAAT-----CTGCTATT--TA-GAGTT----------TCACACTAAGCTTG-AG-------------------------------------------------------------------------------------------------------GCT-AT-------TC---ATTAGTTCGATGGCGCCACATTGGAGCCACGCGCGGCGGCTGCGGTGGGTCAATCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................GCCACGCGCGGCGGCTGCGGT.........2112.002001000000000000000000000000000010000000000000000000000000000000
.GATGTCGCTGTCGATGCGC....................................................................................................................................................................................................................................................................................................1912.002200000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ACGCGCGGCGGCTGCGGTGGGTC....2311.001000000000100000000000000000000000000000000000000000000000000000
..........................................................................................................GTT----------TCACACTAAGCTTG-AG-------------------------------------------------------------------------------------------------------GCT-.....................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CACGCGCGGCGGCTGCGGTGGGTC....2411.001000100000000000000000000000000000000000000000000000000000000000
................GCGCGAAACACTAAACCCCAAGG.................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................ACACTAAACCCCAAGGAC...............................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..............................ACCCCAAGGACACCAAAGA.......................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
..........GTCGATGCGCGAAACACTAAAC........................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AGCCACGCGCGGCGGCTGCGGT.........2211.001000000000100000000000000000000000000000000000000000000000000000
...........................................CAAAGAGGTGAT--------ACATAC...................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
..........................CTAAACCCCAAGGACACCA...........................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
............CGATGCGCGAAACACTAAACCCC.....................................................................................................................................................................................................................................................................................2311.001000000000100000000000000000000000000000000000000000000000000000
.........TGTCGATGCGCGAAACACTAAACCC......................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................AT-------TC---ATTAGTTCGATGGCGCCACATT.................................2611.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................ATTGGAGCCACGCGCGGCGGCTGCGGT.........2711.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CACGCGCGGCGGCTGCGGTGGGT.....2311.001001000000000000000000000000000000000000000000000000000000000000
.............................AACCCCAAGGACACCAAAG........................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........TGTCGATGCGCGAAACACTAAAC........................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TTCGATGGCGCCACATTGG...............................1911.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TTGGAGCCACGCGCGGCGGCTGC............2311.001000100000000000000000000000000000000000000000000000000000000000
........................CACTAAACCCCAAGGACACCAAA.........................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................ATTGGAGCCACGCGCGGCGGC...............2111.001000000000000000010000000000000000000000000000000000000000000000
.GATGTCGCTGTCGATGCG.....................................................................................................................................................................................................................................................................................................1811.001000100000000000000000000000000000000000000000000000000000000000
............................AAACCCCAAGGACACCAAAG........................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TCATGTCGCTGTCGATGCGTGAGACGTTGAATCCAAAGGACACCAAAGAGGTGAT--------ACACACATATATACACACAAGATA---ACTGCTATT--TA-GAGTT----------TAGCACTAAGGTTG--------------------------------------------------------------------------------------------------------TGGCT-AT-------TC---AATAGTTCGATGGCGCCACACTGGAGCCACGTGCAGCTGCTGCGGTGGGTCAGTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.CATGTCGCTGTCGATGCGTGAGA................................................................................................................................................................................................................................................................................................2312.002200000
.......GCTGTCGATGCGTGAGACGTTGA..........................................................................................................................................................................................................................................................................................2312.002100001
.................................................................................................................................................................................................................................................................................CACACTGGAGCCACGTGCAGCTGC...............2411.001100000
............................................................................................................................................................................................................................................................................................CACGTGCAGCTGCTGCGGTG........2011.001100000
.......GCTGTCGATGCGTGAGACGT.............................................................................................................................................................................................................................................................................................2011.001100000
......................GACGTTGAATCCAAAGGACA..............................................................................................................................................................................................................................................................................2011.001000001
.............................AATCCAAAGGACACCAAAGAGGT....................................................................................................................................................................................................................................................................2311.001000001
.......GCTGTCGATGCGTGAGACGTTG...........................................................................................................................................................................................................................................................................................2211.001100000
................GCGTGAGACGTTGAATCCAAAGGA................................................................................................................................................................................................................................................................................2411.001000001
.......................................................................................................................................................................................................................................................................................GGAGCCACGTGCAGCTGCTGCGG..........2311.001000001
......................GACGTTGAATCCAAAGGACACCAAAGAG......................................................................................................................................................................................................................................................................2811.001100000
...........TCGATGCGTGAGACGTTGAATCC......................................................................................................................................................................................................................................................................................2311.001100000
................................CCAAAGGACACCAAAGAG......................................................................................................................................................................................................................................................................1811.001000100
.............GATGCGTGAGACGTTGAATCCAAAGGA................................................................................................................................................................................................................................................................................2711.001100000
.......GCTGTCGATGCGTGAGACGTTGAATCC......................................................................................................................................................................................................................................................................................2711.001000001
TCATGTCGCTGTCGATGCGTGAGA................................................................................................................................................................................................................................................................................................2411.001000001
...................................................................................................................................................................................................................................................................................................AGCTGCTGCGGTGGGTCAGTC2111.001100000
.............GATGCGTGAGACGTTGAAT........................................................................................................................................................................................................................................................................................1911.001000001
...........TCGATGCGTGAGACGTTGAATCCAA....................................................................................................................................................................................................................................................................................2511.001000001
........................CGTTGAATCCAAAGGACACCAAAGA.......................................................................................................................................................................................................................................................................2511.001100000
........................CGTTGAATCCAAAGGACACCAAA.........................................................................................................................................................................................................................................................................2311.001000001
.CATGTCGCTGTCGATGCGTGAGAC...............................................................................................................................................................................................................................................................................................2411.001000001
............................................................................................................................................................................................................................................................................................CACGTGCAGCTGCTGCGGT.........1911.001100000
................................................................................................................................................................................................................................................................................................TGCAGCTGCTGCGGTGGGTCA...2111.001000100
..................................................................................................................................................................................................................................................................................ACACTGGAGCCACGTGCAGCTGCT..............2411.001001000
.CATGTCGCTGTCGATGCGTG...................................................................................................................................................................................................................................................................................................2011.001100000
......................GACGTTGAATCCAAAGGAC...............................................................................................................................................................................................................................................................................1911.001100000
.........TGTCGATGCGTGAGACGTT............................................................................................................................................................................................................................................................................................1911.001001000
droGri2
TCATGTCGTTGTCGATGCGCGAAACGCTGAATCCGAAGGACACCAAGGAGGTGAT--------ACATACACATACACA----AAATA---A--GCAATT--TA-AAGTT----------TCACACTAAGCTGC--------------------------------------------------------------------------------------------------------TGGCT-AT-------TTC--ATTAGTTCGATGGCGCCACGTTGGAGCCACGTGCGGCTGCTGCGGTGGGTCAATCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.CATGTCGTTGTCGATGCGC....................................................................................................................................................................................................................................................................................................1911.00101

Generated: 05/18/2015 at 03:41 PM