ID:dsi_25077 |
Coordinate:3r:4428933-4428991 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
CDS [3r_4428866_4428932_+]; exon [3r_4428771_4428932_+]; CDS [3r_4428992_4429478_+]; exon [3r_4428992_4429478_+]; intron [3r_4428933_4428991_+]
No Repeatable elements found
| ##################################################-----------------------------------------------------------################################################## CGTGATTATAACGATTCAGCTGTTCGGTGGACTGCATGGCCAGAAGTTGCGTGGGTATCTTAATCAAATCTCCTTGATTGAGCCGGCTAAACAAGATCATCTTCCACAGCTGCCAAGGTGAAAAAATGTCACTACGGTGACGGAAAGTGCCTGGTGGAG **************************************************((.((...(((((((((......))))))))))).))......................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
M023 head |
SRR553486 Makindu_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................TACGGTGCCGGAAAGGGCCTGTT.... | 23 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..............TTCAGCTGTTCGGTGGACTG............................................................................................................................. | 20 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| .........................................................................TTGATTGAGCTGGCTAATCAGG................................................................ | 22 | 3 | 2 | 0.50 | 1 | 0 | 0 | 1 | 0 | 0 |
| ....................................................................................................................................TACGGTGCCGGAAAGGGCC........ | 19 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...................................................................................................................AGGTTAAAACATGTCACT.......................... | 18 | 2 | 6 | 0.17 | 1 | 0 | 0 | 0 | 1 | 0 |
| .............................GACTGCATGGCTAGA................................................................................................................... | 15 | 1 | 9 | 0.11 | 1 | 0 | 0 | 0 | 0 | 1 |
| ....................................................................................................................................TACGGTGCCGGGAAGGGCCT....... | 20 | 3 | 10 | 0.10 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..................GCTGTTCGGCGGACTGCT........................................................................................................................... | 18 | 2 | 11 | 0.09 | 1 | 0 | 0 | 0 | 1 | 0 |
| ..........ATGATTTAGCTGTTCGG.................................................................................................................................... | 17 | 2 | 12 | 0.08 | 1 | 0 | 0 | 0 | 0 | 1 |
| ............................................................................................................................................CGGACAGTGTCTGGTGG.. | 17 | 2 | 15 | 0.07 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..................ACTGTTCAGAGGACTGCA........................................................................................................................... | 18 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
|
GCACTAATATTGCTAAGTCGACAAGCCACCTGACGTACCGGTCTTCAACGCACCCATAGAATTAGTTTAGAGGAACTAACTCGGCCGATTTGTTCTAGTAGAAGGTGTCGACGGTTCCACTTTTTTACAGTGATGCCACTGCCTTTCACGGACCACCTC
**************************************************((.((...(((((((((......))))))))))).))......................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 04/24/2015 at 07:24 AM