ID:

dsi_24975

 Coordinate:

node_50677:10390-10539 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.7 -3.2 -2.9

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTTAACAACTTTCTGCTTAACTCCACGCGGCTGTCTCTAGTGAATTCCACACACCGAATGCCGTCTTTTCTCCTCTCTCTTTCCGCTCTGATCTACTTTTACTGCTTCTCCTGCCGGCCTCTTACTCGGACTCTGCTCTTCATCCATAATCGCAATACTCTCCTACGTATACATTAATATAACTACATTTTCTATTACAGACGTTAACAACTGCATTCCGGCAGCACGACACTGACATGGATGGGATCAT
*******************************************************************************..................................((((........))))..........*************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 M024
male body		 M025
embryo
.....................................................................................................................................................................................................TATACGTTAACAACTGCATTCCGGC............................ 25 2 1 2.00 2 1 1 0 0 0 0 0 0 0 0
...................................................................................................................GGCCTCTTACTCGGACTCTGCTCT............................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
....ACAACTTTCTGCTTAACTC................................................................................................................................................................................................................................... 19 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CCGGCAGCACGACACTGACATGGATGGGA.... 29 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................TCATCCATAATCGCAATACTCTCCTACG................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................TTACAGACGTTAACAACTGCATTCCGGC............................ 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................GGCAGCACGACACTGACATGGATGGGAT... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.....................................TAGTGAATTCCACACACCGAATGCCGTC......................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TACATTTTCTATTACAGACGTTAACAA........................................ 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................TTACTCGGACTCTGCTCTTCATCCATA...................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TATATACGTTAACAACTGCATTCCGGC............................ 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CGGCAGCACGACACTGACATGGATGGGA.... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................TGAATTCCACACACCGAATGCCGTC......................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................AGCACGACACTGACATGGATG....... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GTTAACAACTGCATTCCGGC............................ 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...............................................................................................................TGCCGGCCTCTTACTCGGACTCTGC.................................................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...............................................................................TTTCCGCTCTGATCTACTTTTACTGCTT............................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................CGGCCTCTTACTCGGACTCTGCTCT............................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................................CTGACATGGATGGGA.... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AGCACGACACTGACATGGATGGGA.... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................TCTCTTTCCGCTCTGATCTACTTT....................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.........................................................ATGCCGTCTTTTCTC.................................................................................................................................................................................. 15 0 8 0.25 2 0 0 0 0 0 0 2 0 0 0
......................................................................TACTCCATCTTTCCGCTCTGA............................................................................................................................................................... 21 3 10 0.20 2 0 2 0 0 0 0 0 0 0 0
......................CCGCGCGGCTGGATCTAGT................................................................................................................................................................................................................. 19 3 9 0.11 1 0 0 0 0 0 0 0 0 1 0
...................................................CACCGAATACCGTCTTGGC.................................................................................................................................................................................... 19 3 16 0.06 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

AAATTGTTGAAAGACGAATTGAGGTGCGCCGACAGAGATCACTTAAGGTGTGTGGCTTACGGCAGAAAAGAGGAGAGAGAAAGGCGAGACTAGATGAAAATGACGAAGAGGACGGCCGGAGAATGAGCCTGAGACGAGAAGTAGGTATTAGCGTTATGAGAGGATGCATATGTAATTATATTGATGTAAAAGATAATGTCTGCAATTGTTGACGTAAGGCCGTCGTGCTGTGACTGTACCTACCCTAGTA
***************************************************************************************************************..................................((((........))))..........******************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
.........................................................................AGAGAGAAAGGCGAGACTAGATGAA........................................................................................................................................................ 25 0 1 3.00 3 3 0 0 0 0 0 0
.................................................................................................................................................................GGATGCATATGTAATTATATTGATGT............................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0
...........................................................................................................................TGAGCCTGAGACGAGAAGTAGGTAT...................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0
.................................................................................................................................................................................ATATTGATGTAAAAGATAA...................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................ATGTAAAAGATAATGTCTGCAATTGT......................................... 26 0 1 1.00 1 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................CGTGCTGTGACTGTACCTACCCTAGT. 26 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................GAGAAAGGCGAGACTAGATGAA........................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 1 0 0
..........................................................................................................................ATGAGCCTGAGACGAGAAGTAGGT........................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0 0
...........................................................................AGAGAAAGGCGAGACTAGATGAA........................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................GTTAAGGCAGAAAAGAGGA................................................................................................................................................................................ 19 2 1 1.00 1 0 0 1 0 0 0 0
......................................................................................................ACGAAGAGGGCGGCCGGAA................................................................................................................................. 19 2 2 1.00 2 0 2 0 0 0 0 0
.............................................................................................................GGACGGCCGGAGATT.............................................................................................................................. 15 1 5 0.20 1 0 0 0 0 0 1 0
.......................................................................TGAGGTAGAAAGGCGAGACT............................................................................................................................................................... 20 3 15 0.07 1 0 1 0 0 0 0 0
...................................................................................................................................................................................................ATGCCTGCAATCGTTG....................................... 16 2 15 0.07 1 0 0 0 0 0 1 0
....................................................................................................................................................................................TGGATGTAAAAGATA....................................................... 15 1 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 node_50677:10340-10589 + dsi_24975 TTTAAC-A------------AC---TTTC---TGCTTAACTCCAC----GCGGCTGTCT----CTAGTGAATTCCACACACCGAATGCCGTCTTTTCTCCTCTCTCTTTCCGCTCT-------------------------------------GAT---CTACTTTTACTGCTTCTCCTGCCGGCCTCTTACTCGGACTCTGCTCTTCATCCATAATCGCAATACTCTC--CTACGT------ATACA------TTAATATAACTACA-TTTTCTATTACAGACGTTAACAACTGCATTCCGGCAGCACGACACTGACATGGATGGGATCA----T
droSec2 scaffold_112:77042-77291 + TTTAAC-A------------AC---TTTC---TGCTTAACTCCAC----GCGGCTGTCT----CTAGTAAATTCCACACACCGAATGCCGTTTTTTCTCCTCTCTCTTTCCGCTCT-------------------------------------GAT---CTCCTTTTACTGTTTCTCCTGCCGGCCTCTTACTCGGACTCTGCTCTTCATCCATAATCGCAATACTCTC--CTACGT------ATACA------TTAATTTTACTACA-TTTTCTATTACAGACGTTAACAACTGCATTCCGGCAGCACGACACTGACATGGATGGGATCA----T
dm3 chr3RHet:1895300-1895506 - TATAAC-A------------AC---TTTT---GGCTTTAGTCCACGCTTGCGGCTGTCT----ATGCGGAATTCCACACACC------TGTAGCTTCTCCT------------GCT-------------------------------------GAT---CTACTTTTACAGCTTCTCCTGCCGCGATCTTACTCGGACCCCGGA--------------------------------C------ATATA------TTAATATTACTAAATTTTTCTATTACAGACATTAACAACTGCATTCCGCCAGCACGACACTGACTTGGATGGGATCA----T
droEre2 scaffold_4784:23737496-23737711 - CTTAGC-G------------GT---TCAGTTTTGTTTCAATCC-T----GCGGCTGTTT----CTTCTGAATTCCACTCCTCGAATGCCGTCGT-TCTATTCTCTCTTGCTGCTTTGCTGGCGCTTCTCCTGCTACACTGTTTTAATTCTGTTGATCTACTACCTTTACTGCTTTTCTTGTCTCTTTCATTCTCGTGCCCTGCTTTACTTCCATAATCGCAATACTCTTTATTACAT------ATACA----------------------------------------------------------------------------------------
droYak3 v2_chr2L_random_028:1160415-1160596 + TTTAGT-C------------GG---TTTG---TGGGCAATAAAG------TGGGTGTGACAACATGCTGGAGTCTACATGCTGAATCTCAACTTTCTAACTTTCTTTATATGGTCG-------------------------------------GAA---ATGCTTC-------------------CTTTTGCCTGTTACGTGCTTTTCAACGA-AGCTGTTATACC---------------------------------------------------------------------CTTTTACTCTACAAGAAACGGATATAAAAATATATTTTTTA
droEug1 scf7180000408062:5169-5353 - TTTTTT-ACCAATCGTACCTATTTTTACT---GCCCTAAGTGCCTTCTATCAGCAATAT----ATAC-----------------------------------------------------------------------------------------TCATTAAT--------TTCATTTGCGTTGTTGTTATTTTT-------------------------------------AAATACATACATATTTTATATTTAA---TATTAC--ATTTCTATTGCAGACCTTAACAACTGCTTTCCAGCAGCACGACACAGAAATGGATGGGATCA----T
droBia1 scf7180000297241:234-310 - TTAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAATTACA-ATTTCTATTGCAGACATTAACAACTGCATTCCGGCAGCACGACACTGATATGGATGGAATCA----T
droTak1 scf7180000415801:166433-166516 - TGTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------TTAATGTTATTATAAATTTTTATTGCAGACTTTAACAACTGCATTCCGACAGCACGACACTGATATGGATGGGATCA----T
droEle1 scf7180000490401:5792-5874 + TGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G------TTAACATG-TTATAATTTTATTTTCCAGACTTTAACAACTGCATTCCGGCAACACGACACTGATATGGATGGGATCA----T
droRho1 scf7180000768318:9598-9659 + TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTTGCAGACTTTAACAACAGCATTCCGGCAGCACGACACTGATATGGATGGGATTA----T
droFic1 scf7180000452683:39140-39215 + ATTAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTATA---CTTTTTTTTAGACTTTAACAACTGCGTTTCGTCAGCATGACACGGATATGGATGGAATCA----T
droKik1 scf7180000301299:1402-1474 + ATTTAATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--TTTTCCATTACAGACTTTAACAACAGCTTTCCGGCAGCATGACACTGACATGGATGGGGTCA----T
droAna3 scaffold_13082:2104692-2104769 + TATATA-A------------AT---TTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT--GTTTTTATTTCAGACATTAACAACAGCATTCCAACAACATGACACTGATATGGACGGAGTCA----T
droBip1 scf7180000395092:9089-9174 + CTCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAT------ATGTA------TGTATAT-----CA-TTTTTCATTTCAGACATTGACAACAGCATTCCAACAACATGACACTGATATGGATGGAGTTA----T
dp5 2:25173126-25173191 + CCAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---TTTTTTTGCAGACATTAACAACTGCATTCCGGCAACATGATACTGATATGGACGGCGTTA----T
droPer2 scaffold_6:478482-478547 + CCAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---TTTTTTTGCAGACATTAACAACTGCATTCCGGCAACATGATACTGATATGGACGGCGTTA----T
droWil2 scf2_1100000004943:13820056-13820117 + TTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTACAGACCTTGACAACTGCATTCAGACAGCATGACACGGATATGGATGGAGTCA----T
droVir3 scaffold_12958:1928349-1928409 + TCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTACAGACGTTAACTACAGCCTTCCGGCAACATGATACCGACATGGATGGTGTCA----T
droMoj3 scaffold_6540:4281393-4281470 + ATTAAT-A------------AA---CAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TT--TATTTAATTGCAGACTTTGACTACAGCCTTCAAGCAACATGACACCGACATGGATGGCGTCA----T
droGri2 scaffold_15116:370260-370326 - TATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCAATTGCAGACGTTAACTACAGCCTTCAGACAACATGATACCGACATGGATGGTGTCA----T

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTTAAC-A------------AC---TTTC---TGCTTAACTCCAC----GCGGCTGTCT----CTAGTGAATTCCACACACCGAATGCCGTCTTTTCTCCTCTCTCTTTCCGCTCT-------------------------------------GAT---CTACTTTTACTGCTTCTCCTGCCGGCCTCTTACTCGGACTCTGCTCTTCATCCATAATCGCAATACTCTC--CTACGT------ATACA------TTAATATAACTACA-TTTTCTATTACAGACGTTAACAACTGCATTCCGGCAGCACGACACTGACATGGATGGGATCA----TSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................GGCCTCTTACTCGGACTCTGCTCT..................................................................................................................................2412.00200000020000000000
....AC-A------------AC---TTTC---TGCTTAACTC......................................................................................................................................................................................................................................................................................................1912.00220000000000000000
...........................................................................................................................................................................................................................................................................................................CCGGCAGCACGACACTGACATGGATGGGA........2912.00200000011000000000
..............................................................................................................................................................................................................TCATCCATAATCGCAATACTCTC--CTACG....................................................................................................2811.00100000000100000000
....................................................................................................................................................................................................................................................................................TTACAGACGTTAACAACTGCATTCCGGC................................2811.00100000000010000000
.............................................................................................................................................................................................................................................................................................................GGCAGCACGACACTGACATGGATGGGAT.......2811.00100010000000000000
................................................................TAGTGAATTCCACACACCGAATGCCGTC....................................................................................................................................................................................................................................................2811.00100000010000000000
........................................................................................................................................................................................................................................................................TACA-TTTTCTATTACAGACGTTAACAA............................................2711.00100000000010000000
............................................................................................................................................................................................TTACTCGGACTCTGCTCTTCATCCATA.........................................................................................................................2711.00100000010000000000
............................................................................................................................................................................................................................................................................................................CGGCAGCACGACACTGACATGGATGGGA........2811.00100000001000000000
...................................................................TGAATTCCACACACCGAATGCCGTC....................................................................................................................................................................................................................................................2511.00100000000000010000
................................................................................................................................................................................................................................................................................................................AGCACGACACTGACATGGATG...........2111.00110000000000000000
............................................................................................................................................................................................................................................................................................GTTAACAACTGCATTCCGGC................................2011.00100010000000000000
..................................................................................................................................................................................TGCCGGCCTCTTACTCGGACTCTGC.....................................................................................................................................2511.00100000000100000000
..........................................................................................................TTTCCGCTCT-------------------------------------GAT---CTACTTTTACTGCTT..................................................................................................................................................................2811.00100000010000000000
.....................................................................................................................................................................................CGGCCTCTTACTCGGACTCTGCTCT..................................................................................................................................2511.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................CTGACATGGATGGGA........1511.00100000010000000000
................................................................................................................................................................................................................................................................................................................AGCACGACACTGACATGGATGGGA........2411.00100000010000000000
......................................................................................................TCTCTTTCCGCTCT-------------------------------------GAT---CTACTTT..........................................................................................................................................................................2411.00100000000100000000
....................................................................................ATGCCGTCTTTTCTC.............................................................................................................................................................................................................................................1580.25200000000002000000
droSec2
TTTAAC-A------------AC---TTTC---TGCTTAACTCCAC----GCGGCTGTCT----CTAGTAAATTCCACACACCGAATGCCGTTTTTTCTCCTCTCTCTTTCCGCTCT-------------------------------------GAT---CTCCTTTTACTGTTTCTCCTGCCGGCCTCTTACTCGGACTCTGCTCTTCATCCATAATCGCAATACTCTC--CTACGT------ATACA------TTAATTTTACTACA-TTTTCTATTACAGACGTTAACAACTGCATTCCGGCAGCACGACACTGACATGGATGGGATCA----TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................ACACTGACATGGATGGGAT.......1911.0010010
................................................................................................................................................................................................................................................................................................ACAACTGCATTCCGGCAGCACGA.........................2311.0010010
.................................................................................................................................................................................................................................................................................................................GCACGACACTGACATGGATGGGAT.......2411.0010010
.....................................................................................................................................................................................................................................................................................................................GACACTGACATGGATGGGAT.......2011.0010010
.....................................................................................................................................................................................................................................................................................................................GACACTGACATGGATGGGATC......2111.0010010
........................................................................................................................................................................................................................................................................................................ATTCCGGCAGCACGACACT.....................1911.0010100
..............................................................................................................................................................................................................................................................................................TAACAACTGCATTCCGGCAGCACGACAC......................2811.0011000
...................................................................................................................................................................................................................................................................................................................ACGACACTGACATGGATG...........1811.0011000
.....................................................................................................................................................................................................................................................................................................................GACACTGACATGGATGGGATCA----.2211.0010100
....................................................................................................................................................................................................................................................................................................................CGACACTGACATGGATGGGAT.......2111.0010010
dm3
TATAAC-A------------AC---TTTT---GGCTTTAGTCCACGCTTGCGGCTGTCT----ATGCGGAATTCCACACACC------TGTAGCTTCTCCT------------GCT-------------------------------------GAT---CTACTTTTACAGCTTCTCCTGCCGCGATCTTACTCGGACCCCGGA--------------------------------C------ATATA------TTAATATTACTAAATTTTTCTATTACAGACATTAACAACTGCATTCCGCCAGCACGACACTGACTTGGATGGGATCA----TSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................GACACTGACTTGGATGGGAT.......2016.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................GACACTGACTTGGATGGGATCA----.2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................ACACTGACTTGGATGGGATCA----T2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................ACTGACTTGGATGGGATC......1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................GAATTCCACACACC------TGTAGCTTCTCC............................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TTGCGGCTGTCT----ATC..............................................................................................................................................................................................................................................................................15202.4549000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................ACTGACTTGGATGGGATCA----.1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................T----ATGCGGAATTCCACACACC------TGTAGC..................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................CATTAACAACTGCATTCCGCCA...............................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................AGCACGACACTGACTTGGATGGGATCA----.2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................ACTGACTTGGATGGGATCA----T2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000
.......................................................................TTCCACACACC------TGTAGCTTCTCCT------------GC.............................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................ACGACACTGACTTGGATGG..........1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TCCGCCAGCACGACACTGACTTGGATGGGA........3012.0020000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................CACTGACTTGGATGGGAT.......1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................................................................TCCGCCAGCACGACACTGACT.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................CACTGACTTGGATGGGATC......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................................................................TGCGGAATTCCACACACC------TGTAGCT.................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................CACGACACTGACTTGGATGGGA........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................TGCGGAATTCCACACACC------TGTAGCTTC...............................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GCACGACACTGACTTGGATGGGA........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................CATTAACAACTGCATTCCGCCAGCACGA.........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................AGCACGACACTGACTTGGATGG..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................CACGACACTGACTTGGATGGGAT.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
................................GGCTTTAGTCCACGCTTGC.............................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CATTCCGCCAGCACGACACTGACTTG...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AC---TTTT---GGCTTTAGTCCACGCTTGCGGC..........................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................GCATTCCGCCAGCACGACACTGACTT................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................CGCCAGCACGACACTGACTTG...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................CCCCGGA--------------------------------C------ATATA------TTAATA............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
......................................................................................................................................................................................................................................................................................................................ACACTGACTTGGATGGGA........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CGACACTGACTTGGATGGGAT.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................ACGACACTGACTTGGATGGGA........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................................................................ACC------TGTAGCTTCTCCT------------GCT-------------------------------------.......................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................ACGACACTGACTTGGATGGGATC......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................TTAACAACTGCATTCCGCCAGCACGA.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................ACACTGACTTGGATGGGATC......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TAGTCCACGCTTGCGGCTGTCT----ATGC.............................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TGCATTCCGCCAGCACGAC........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................AGCACGACACTGACTTGGATGGGA........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..............................................................................................................................................................................................................................................................................................................CCAGCACGACACTGACTTGGATGGG.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................CAGCACGACACTGACTTGGATGGGAT.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................CCAGCACGACACTGACTTGGATGGGA........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GCCAGCACGACACTGACTTGGA.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................AGCACGACACTGACTTGGATGGGAT.......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TAACAACTGCATTCCGCCAGCACGAC........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................ACATTAACAACTGCATTCCGCC................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................AACTGCATTCCGCCAGCACGACACT.....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TTT---GGCTTTAGTCCACGCTTGCGGC..........................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GCACGACACTGACTTGGATGG..........2111.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CTTGCGGCTGTCT----ATC..............................................................................................................................................................................................................................................................................1620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CTTAGC-G------------GT---TCAGTTTTGTTTCAATCC-T----GCGGCTGTTT----CTTCTGAATTCCACTCCTCGAATGCCGTCGT-TCTATTCTCTCTTGCTGCTTTGCTGGCGCTTCTCCTGCTACACTGTTTTAATTCTGTTGATCTACTACCTTTACTGCTTTTCTTGTCTCTTTCATTCTCGTGCCCTGCTTTACTTCCATAATCGCAATACTCTTTATTACAT------ATACA----------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................CCTGCTACACTGTTTTAATTCTGT........................................................................................................................................................................................2411.0011000000
droYak3
TTTAGT-C------------GG---TTTG---TGGGCAATAAAG------TGGGTGTGACAACATGCTGGAGTCTACATGCTGAATCTCAACTTTCTAACTTTCTTTATATGGTCG-------------------------------------GAA---ATGCTTC-------------------CTTTTGCCTGTTACGTGCTTTTCAACGA-AGCTGTTATACC---------------------------------------------------------------------CTTTTACTCTACAAGAAACGGATATAAAAATATATTTTTTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................TTTCAACGA-AGCTGTTATACC---------------------------------------------------------------------CTTT.....................................2511.00100100000000
.........................................................................................................................................................................................CTTTTGCCTGTTACGTGCTTTTCAAC.............................................................................................................................2611.00101000000000
......................................................TGTGACAACATGCTGGAGTCTACATGCT..............................................................................................................................................................................................................................................................2811.00101000000000
.....T-C------------GG---TTTG---TGGGCAATAAAG------TGGGT.........................................................................................................................................................................................................................................................................................2511.00100100000000
............................................................................CATGCTGAATCTCAACTTTCT...............................................................................................................................................................................................................................................21200.05101000000000
droEug1
TTTTTT-ACCAATCGTACCTATTTTTACT---GCCCTAAGTGCCTTCTATCAGCAATAT----ATAC-----------------------------------------------------------------------------------------TCATTAAT--------TTCATTTGCGTTGTTGTTATTTTT-------------------------------------AAATACATACATATTTTATATTTAA---TATTAC--ATTTCTATTGCAGACCTTAACAACTGCTTTCCAGCAGCACGACACAGAAATGGATGGGATCA----TSizeHit CountTotal NormTotal
No Reads
droBia1
TTAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAATTACA-ATTTCTATTGCAGACATTAACAACTGCATTCCGGCAGCACGACACTGATATGGATGGAATCA----TSizeHit CountTotal NormTotal
No Reads
droTak1
TGTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------TTAATGTTATTATAAATTTTTATTGCAGACTTTAACAACTGCATTCCGACAGCACGACACTGATATGGATGGGATCA----TSizeHit CountTotal NormTotal
No Reads
droEle1
TGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G------TTAACATG-TTATAATTTTATTTTCCAGACTTTAACAACTGCATTCCGGCAACACGACACTGATATGGATGGGATCA----TSizeHit CountTotal NormTotal
No Reads
droRho1
TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTTGCAGACTTTAACAACAGCATTCCGGCAGCACGACACTGATATGGATGGGATTA----TSizeHit CountTotal NormTotal
No Reads
droFic1
ATTAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTATA---CTTTTTTTTAGACTTTAACAACTGCGTTTCGTCAGCATGACACGGATATGGATGGAATCA----TSizeHit CountTotal NormTotal
No Reads
droKik1
ATTTAATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--TTTTCCATTACAGACTTTAACAACAGCTTTCCGGCAGCATGACACTGACATGGATGGGGTCA----TSizeHit CountTotal NormTotal
No Reads
droAna3
TATATA-A------------AT---TTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT--GTTTTTATTTCAGACATTAACAACAGCATTCCAACAACATGACACTGATATGGACGGAGTCA----TSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................ATGACACTGATATGGACGGA.........2012.002001010
................................................................................................................................................................................................................................................................................................................AACATGACACTGATATGGACGGAGT.......2511.001010000
.............................................................................................................................................................................................................................................................................................................AACAACATGACACTGATATGGACGGAG........2711.001000010
......................................................................................................................................................................................................................................................................................................................ACACTGATATGGACGGAGTCA----.2111.001010000
....................................................................................................................................................................................................................................................................................................CAGCATTCCAACAACATGACACT.....................2311.001010000
.....................................................................................................................................................................................................................................................................................................................GACACTGATATGGACGGA.........1811.001000010
..................................................................................................................................................................................................................................................................................................AACAGCATTCCAACAACATGAC........................2211.001000001
..................................................................................................................................................................................................................................................................................................................CATGACACTGATATGGACGGAGTC......2411.001000010
.................................................................................................................................................................................................................................................................................................................ACATGACACTGATATGGAC............1911.001010000
.....................................................................................................................................................................................................................................................................................................................GACACTGATATGGACGGAGT.......2011.001001000
...............................................................................................................................................................................................................................................................................................................CAACATGACACTGATATGGACGG..........2311.001100000
...................................................................................................................................................................................................................................................................................................................ATGACACTGATATGGACGGAGT.......2211.001000010
................................................................................................................................................................................................................................................................................................................AACATGACACTGATATGGACGGA.........2311.001000100
...............................................................................................................................................................................................................................................................................................................CAACATGACACTGATATGGACGGAGTC......2711.001000010
................................................................................................................................................................................................................................................................................................................AACATGACACTGATATGGAC............2011.001010000
.....................................................................................................................................................................................................................................................................................................AGCATTCCAACAACATGACACT.....................2211.001010000
droBip1
CTCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAT------ATGTA------TGTATAT-----CA-TTTTTCATTTCAGACATTGACAACAGCATTCCAACAACATGACACTGATATGGATGGAGTTA----TSizeHit CountTotal NormTotal
No Reads
dp5
CCAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---TTTTTTTGCAGACATTAACAACTGCATTCCGGCAACATGATACTGATATGGACGGCGTTA----TSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................................................................AACATGATACTGATATGGACGGC.........2312.0020200000000
..........................................................................................................................................................................................................................................................................................................TCCGGCAACATGATACTGATATGGACG...........2712.0020000000020
.............................................................................................................................................................................................................................................................................................................GGCAACATGATACTGATATGGACGGC.........2612.0020100100000
...............................................................................................................................................................................................................................................................................................AACAACTGCATTCCGGCAAC.............................2011.0010100000000
......................................................................................................................................................................................................................................................................................................GCATTCCGGCAACATGATACTGATAT................2611.0010010000000
....................................................................................................................................................................................................................................................................................................................TGATACTGATATGGACGGC.........1911.0010100000000
.............................................................................................................................................................................................................................................................................................................GGCAACATGATACTGATATG...............2011.0010100000000
...........................................................................................................................................................................................................................................................................................................CCGGCAACATGATACTGATATG...............2211.0010010000000
...............................................................................................................................................................................................................................................................................................AACAACTGCATTCCGGCAACATGATACT.....................2811.0010100000000
..............................................................................................................................................................................................................................................................................................TAACAACTGCATTCCGGCAACATG..........................2411.0010100000000
..................................................................................................................................................................................................................................................................................................................CATGATACTGATATGGACGG..........2011.0010000000010
...............................................................................................................................................................................................................................................................................................................CAACATGATACTGATATGGACGGCGC.......2611.0010010000000
droPer2
CCAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---TTTTTTTGCAGACATTAACAACTGCATTCCGGCAACATGATACTGATATGGACGGCGTTA----TSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................ATTCCGGCAACATGATACTG....................2011.001100000
........................................................................................................................................................................................................................................................................................................ATTCCGGCAACATGATACTGATATGGA.............2711.001100000
.................................................................................................................................................................................................................................................................................................................ACATGATACTGATATGGACGGCGTT......2511.001100000
........................................................................................................................................................................................................................................................................................................ATTCCGGCAACATGATACTGATATGGAC............2811.001100000
droWil2
TTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTACAGACCTTGACAACTGCATTCAGACAGCATGACACGGATATGGATGGAGTCA----TSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................ATGACACGGATATGGATGGA.........2012.00200110
.................................................................................................................................................................................................................................................................................................................GCATGACACGGATATGGATGGAGTC......2511.00100010
.................................................................................................................................................................................................................................................................................................................GCATGACACGGATATGGATGGAGT.......2411.00100100
...................................................................................................................................................................................................................................................................................................................ATGACACGGATATGGATGGAGTC......2311.00100100
..................................................................................................................................................................................................................................................................................................................CATGACACGGATATGGATGGAGT.......2311.00100100
.....................................................................................................................................................................................................................................................................................................................GACACGGATATGGATGGAGT.......2011.00101000
................................................................................................................................................................................................................................................................................................................AGCATGACACGGATATGGATGG..........2211.00101000
.....................................................................................................................................................................................................................................................................................................................GACACGGATATGGATGGA.........1811.00100001
...................................................................................................................................................................................................................................................................................................................ATGACACGGATATGGATGGAGT.......2211.00100100
........................................................................................................................................................................................................................................................................................................ATTCAGACAGCATGACACGGATATGG..............2611.00100010
droVir3
TCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTACAGACGTTAACTACAGCCTTCCGGCAACATGATACCGACATGGATGGTGTCA----TSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................GATACCGACATGGATGGT.........1819.009001100000000000000000000000004002000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................AACATGATACCGACATGGATGGTGT.......2511.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TACAGCCTTCCGGCAACATGATA.......................2311.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................GTTAACTACAGCCTTCCGGC................................2011.001000000000000000000000000000000000000000000000000000000000000001
.......................................................................................................................................................................................................................................................................................................CCTTCCGGCAACATGATAC......................1911.001000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................GATACCGACATGGATGGTGT.......2011.001000000000000000000000000000000000001000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................ACATGATACCGACATGGATGGTGTCA----.2611.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................CATGATACCGACATGGATGGT.........2111.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TTCCGGCAACATGATACCGACATGG..............2511.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................GATACCGACATGGATGGTGTC......2111.001000000000001000000000000000000000000000000000000000000000000000
droMoj3
ATTAAT-A------------AA---CAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TT--TATTTAATTGCAGACTTTGACTACAGCCTTCAAGCAACATGACACCGACATGGATGGCGTCA----TSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................TGACACCGACATGGATGGCGT.......2111.001100000
...................................................................................................................................................................................................................................................................................................................ATGACACCGACATGGATGGCGTC......2311.001100000
.....................................................................................................................................................................................................................................................................................................................GACACCGACATGGATGGCGT.......2011.001001000
droGri2
TATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCAATTGCAGACGTTAACTACAGCCTTCAGACAACATGATACCGACATGGATGGTGTCA----TSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................................................................................................................................................................................................................................AACTACAGCCTTCAGACAACA............................2111.00110

Generated: 05/19/2015 at 04:04 PM