ID:dsi_24957 |
Coordinate:3r:4422116-4422265 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3r_4422045_4422115_+]; CDS [3r_4422045_4422115_+]; intron [3r_4422116_4425248_+]
No Repeatable elements found
| ##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CCAAGCCAGAACAGCTTTTCGATAAAGAACGCCAACTCGACGTATGCCAGGTATGTTCTCGATTTTTGATTCCAACCATCCAACCACATAACCATCCACAACACACTCGAATGCACAAACTCTCTCGATCTGCATCTCCTTTCTTAAAAGCTATCTCTTCTTACCCATAGCTTGTGATTATGTTTTTACCCGCTCTGCTTTCAACCAAATTGGCCTAACTTCCCAATTATTCTAATCTTATATCATCTGT **************************************************....(((...(((..(((....)))..))).))).((((((.(((...............(((((...............)))))............(((((((............)))))))))).)))))).................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M024 male body |
SRR553485 Chicharo_3 day-old ovaries |
M023 head |
SRR553487 NRT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................CGACGTATGCCAGGTATG................................................................................................................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................GATAAAGAACGCCAACTCGAC................................................................................................................................................................................................................. | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................................................................TTTATGATTATGTTTTTACC............................................................ | 20 | 2 | 13 | 0.31 | 4 | 0 | 0 | 4 | 0 | 0 | 0 |
| ...............................................................................................................TGAACAAACTCTCTTGGTCTG...................................................................................................................... | 21 | 3 | 4 | 0.25 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ............................................................................................................................TCGAACTGCAGCTCCTCTCTT......................................................................................................... | 21 | 3 | 5 | 0.20 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .................................................................................................................................CTGCATCACCTTTCT.......................................................................................................... | 15 | 1 | 14 | 0.07 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ..........................................................TCGATGTTTGATTGCGACC............................................................................................................................................................................. | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
|
GGTTCGGTCTTGTCGAAAAGCTATTTCTTGCGGTTGAGCTGCATACGGTCCATACAAGAGCTAAAAACTAAGGTTGGTAGGTTGGTGTATTGGTAGGTGTTGTGTGAGCTTACGTGTTTGAGAGAGCTAGACGTAGAGGAAAGAATTTTCGATAGAGAAGAATGGGTATCGAACACTAATACAAAAATGGGCGAGACGAAAGTTGGTTTAACCGGATTGAAGGGTTAATAAGATTAGAATATAGTAGACA
**************************************************....(((...(((..(((....)))..))).))).((((((.(((...............(((((...............)))))............(((((((............)))))))))).)))))).................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM343915 embryo |
SRR553485 Chicharo_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
SRR902009 testis |
SRR553486 Makindu_3 day-old ovaries |
M053 female body |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................................................................................................AGGGTGAATAAGATTGGA............ | 18 | 2 | 6 | 2.33 | 14 | 0 | 8 | 5 | 0 | 0 | 1 | 0 | 0 |
| ............................................................................GTAGGTCGATGTATTGGTTGGT........................................................................................................................................................ | 22 | 3 | 3 | 1.33 | 4 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ............................................................................GTGGGTTGATGTATTGGTTGGT........................................................................................................................................................ | 22 | 3 | 6 | 1.17 | 7 | 7 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................GTGTTGTGTGAGGTAACGTGGTT................................................................................................................................... | 23 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................................GTGGGTTGATGTATTGGTAGGT........................................................................................................................................................ | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................TATTGGAAGGTGTAGTGCGA............................................................................................................................................... | 20 | 3 | 8 | 0.63 | 5 | 0 | 0 | 0 | 0 | 5 | 0 | 0 | 0 |
| ............................................................................................................................................................................................................................AGGGTGAATAAGATTGG............. | 17 | 2 | 19 | 0.42 | 8 | 0 | 3 | 4 | 0 | 0 | 1 | 0 | 0 |
| ...........................................................................................................................................................................................................................GAGGGTGAATAAGATTGGA............ | 19 | 3 | 19 | 0.42 | 8 | 0 | 2 | 2 | 0 | 0 | 4 | 0 | 0 |
| ...........................................................................GGTAGGTTGGTCTATTGGTTGCT........................................................................................................................................................ | 23 | 3 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ............................................................................GTAGGTCGATGTATTGGTAGCT........................................................................................................................................................ | 22 | 3 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ............................................................................................................................................AAGGAGTTTCGATAGAGACG.......................................................................................... | 20 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................................CGTGTTTGAGAGTGCTTG........................................................................................................................ | 18 | 2 | 5 | 0.20 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................................GTGGGTCGATGTATTGGTAGGT........................................................................................................................................................ | 22 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................................................................................................................................................................................AAGGGTGAATAAGAT................ | 15 | 1 | 11 | 0.18 | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 |
| ......................................................................................................................................................................................AAAAATGGGCTAGAGGAAA................................................. | 19 | 2 | 20 | 0.15 | 3 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 |
| ...............................................................................................................................................................................................................................GTGAATAAGATTGGAATACA....... | 20 | 3 | 7 | 0.14 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................TAAGGGTGGTTGGTTGGTG................................................................................................................................................................... | 19 | 2 | 7 | 0.14 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .....................................................................AAGGATGGTAGCTTGGTGC.................................................................................................................................................................. | 19 | 3 | 16 | 0.13 | 2 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 |
| .......................................................................................TTTTGGTAGGTGTAGTGCGA............................................................................................................................................... | 20 | 3 | 8 | 0.13 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................................................ACTAAGGTAGCTAGGTTG...................................................................................................................................................................... | 18 | 2 | 8 | 0.13 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| ............................................................................................................................................................................................................................AGGGTTAATAAGATG............... | 15 | 1 | 17 | 0.12 | 2 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................................................................................ACCGGTCTGAAGGGTTA....................... | 17 | 2 | 12 | 0.08 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................................................................................................................................................TAAGATTAGAATATG....... | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| ...................................................................................GGGGTATTGGTAGGTG....................................................................................................................................................... | 16 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ....................................................................TAAGGGTGGTTGGTTGGTGA.................................................................................................................................................................. | 20 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
Generated: 04/24/2015 at 07:18 AM