ID:

dsi_24933

 Coordinate:

4:631125-631274 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.9 -11.6 -11.3 -11.2

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
Homo6DNAhAT-Pegasus+
DNAREP1_DYakRCHelitron+

Sense Strand Reads

TGTTACATACTTTTCTACGAATCTAGTATATTAACTTCCTATACGAGTTACGGGTATAAAAATGTGGATTGCAAATGTCTCATTCACTTTGTTTGCAAAGTACGACGACAAAGTTAGACGATTTTTTTTGGTTTTATGGACGGTCAAATGATATCTTCAGACATTTTTGAGTTTATGAAGCTTTTGTTGTCTTTTTTCAGGTCCATTACGATAGCATGACCGACATTGATGCGAGTGCTCAACAGCAACA
**********************************************************....((....(((....((((.(((..(((((((((((...)))....)))))))).....................)))))))..)))....))************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M053
female body
 GSM343915
embryo
 M023
head
 M024
male body		 O001
Testis
................................................TACGGGTATAAAAATGTGGATTGCAAA............................................................................................................................................................................... 27 0 1 3.00 3 2 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................ATTAAGCCTTTGTTGTCT.......................................................... 18 2 16 1.94 31 0 3 0 7 0 1 12 0 5 2 1
...............................................................................................................................TTGGTTTTATGGACGGTCAAATGATA................................................................................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................AAAATGTGGATTGCAAA............................................................................................................................................................................... 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TGAGTTTATGAAGCTTTTGTTGTCTT......................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
............................................................................................TTGCAAAGTACGACGACAAAGTTAGA.................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................TTTTGGTTTTATGGACGGTCAAA...................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................TCTTTTTTCAGGTCCATTACGATA..................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................TGCAAAGTACGACGACAAAGGTAGA.................................................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................ATGAAGCTTTTGTTGTCTTTT....................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................TACGGGTATAAAAATGTGGATTGCAA................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TGGACGGTGAAATGATATCTGC............................................................................................ 22 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................TACGACGACAAAGTTAGACGATTTTTT........................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GATGCGAGTGCTCAACAGCA... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................TGCAAAGTACGACGACAAAGTTAGA.................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAGCCTTTGTTGTCTGATT...................................................... 19 3 20 0.65 13 0 0 0 2 0 0 0 0 7 0 4
..............................................................................................................................................................................ATTAAGCTTTTGTTGTCT.......................................................... 18 1 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0
...TACATACTTTTCTACGAATCT.................................................................................................................................................................................................................................. 21 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................TGGACGGAGAACTGATATCT.............................................................................................. 20 3 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0
..........................................ACGAGTTACGGGTATA................................................................................................................................................................................................ 16 0 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0
............................................GAGTTACGGGAATAAAAA............................................................................................................................................................................................ 18 1 11 0.09 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................TGCCAAGTACGACGA.............................................................................................................................................. 15 1 11 0.09 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................AAGCCTTTGTTGTCTGATTT..................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

ACAATGTATGAAAAGATGCTTAGATCATATAATTGAAGGATATGCTCAATGCCCATATTTTTACACCTAACGTTTACAGAGTAAGTGAAACAAACGTTTCATGCTGCTGTTTCAATCTGCTAAAAAAAACCAAAATACCTGCCAGTTTACTATAGAAGTCTGTAAAAACTCAAATACTTCGAAAACAACAGAAAAAAGTCCAGGTAATGCTATCGTACTGGCTGTAACTACGCTCACGAGTTGTCGTTGT
*************************************************************************************************....((....(((....((((.(((..(((((((((((...)))....)))))))).....................)))))))..)))....))********************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
...................................................................................................................................................................................CGAAAACAACAGAAAAAAGTCCAGGT............................................. 26 0 1 2.00 2 1 0 0 0 1 0 0
..................................................................................................................................................................................TCGAAAAGAACAGAAAAAAGTCCAGGT............................................. 27 1 1 1.00 1 0 1 0 0 0 0 0
...................................................................................AGTGAAGCAAACGTTTCATGCTGCTGT............................................................................................................................................ 27 1 1 1.00 1 1 0 0 0 0 0 0
...........AAAGATGCTTAGATCATATAATTGAATAT.................................................................................................................................................................................................................. 29 3 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................ACTATAGAAGTCTGTAAAAACTCAAA............................................................................ 26 0 1 1.00 1 0 0 0 0 0 1 0
.........................................................................................................................................................AGAAGTCTGTAAAAACTCAAATACTT....................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0
.......................................................................................................................................................................................................CCAGGTAATGCTATCGTAC................................ 19 0 1 1.00 1 0 0 0 1 0 0 0
.............................................................................................................................................................................................AGAAAAAAGTCCAGGTAATGCTAT..................................... 24 0 1 1.00 1 0 0 1 0 0 0 0
..................................................................................................................................................................................................AAAGTCCAGGTAATGCTATCGTACTGGCT........................... 29 0 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................................................................................................................................TCGCACTAGCTGTAACTA.................... 18 2 2 0.50 1 0 0 0 1 0 0 0
...........................................................................................................TGTTTCAATCTGATAA............................................................................................................................... 16 1 5 0.20 1 0 0 0 0 0 0 1
.........GAAAAGATGCTTAGAT................................................................................................................................................................................................................................. 16 0 6 0.17 1 0 0 0 0 0 0 1
.........................................................................................................GCTGTTTCAATCTGAT................................................................................................................................. 16 1 6 0.17 1 0 0 0 0 0 0 1
........................................................................................................AGCTGTTTCAATCTG................................................................................................................................... 15 1 9 0.11 1 0 0 0 0 0 0 1
........................................................................................................................................................TAGAAGTCTGTAGAACCT................................................................................ 18 2 14 0.07 1 0 0 0 0 0 0 1
........................................................................................................................................................TAGAAGTCTGTAGAA................................................................................... 15 1 15 0.07 1 0 0 0 0 0 0 1
...........................................................................................AAACGTTTGGTCCTGCTGT............................................................................................................................................ 19 3 20 0.05 1 1 0 0 0 0 0 0
.......................................................................................................CAGCTGTTTCAATCTGA.................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 1
......................................................................................................................................ACACCTGCCATTTTACT................................................................................................... 17 2 20 0.05 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 4:631075-631324 - dsi_24933 T--GTTACATACTT-------TTCTACGAATCTAGTATATTAACTTCCTA--T-------ACGAGTTACGGGTATAAAAATG----------TG------------GATTGCAAATGTCTCATTCACTT--TGTTT-------------------------------------------GCAAAGTACG-------------------------------ACGACAA-------------AGTTAGACGATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGTTTT------ATGG-----------------------------------AC-----------------GGTC-----AAATGATATCTTCAGACA---TTT---------------------------------------------------------------------------TTGAGTTTATGA-AGCTTT---TGTT---------G-TCTTTTTTCAGGTCCATTAC-GATAGCATGACCGACATTGATGCGAGTGCTCAACAGCAACA
droSec2 scaffold_30:530371-530589 - T--GTTACATACTT-------TTCTACGAATCTAGTATATTAAATTCCTA--T-------ACGAGTTACGGGTATAAAAATG----------TG------------GATTGCAAATGTTTCATTCATTT------------------------------------------------------------------------------------------------------------------------ATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGTTTT------ATGG-----------------------------------AC-----------------GGTC-----AAATGATATCTTCAGACA---TTT---------------------------------------------------------------------------TTGAGTTTATGT-AGCTTT---TGTT---------G-TCTTTTTTCAGGTCCATTAC-GATAGCATGACCGACATTGATGCGAGTGCTCAACAGCAACA
dm3 chr4:823904-824153 - T--GTTACATACTT-------TTCAACGAATCTAGTATATTGATTTTCTC--C-------ACGAGTAACGGGTATAAAAATG----------TG------------GATTGCAAATGTCTCATTTACTT--TGTGT-------------------------------------------GCAATATACG-------------------------------ACGAAAT-------------AGTTAGACGACTTC-----A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGTTTT------ATGG-----------------------------------AC-----------------GGTC-----AAATGATATCTTCAGAC----TTT---------------------------------------------------------------------------TTGAGTTTACGT-ACCTCT---TGTT---------G-TCTTTTTTCAGGCTCATTAC-GATAGCATGACCGACATTGATGCGAGTGCTCAACAGCAACA
droEre2 scaffold_4512:443594-443881 + TTTGTTACATACTT-------TTTAACGAACCTAGTATACCATTTTTTTT--T-TTTTT-TTGAGTAACGGGTGTAAAAATG----------TGTATACGTTATGCGTTCGCAAATTTCTCGTTCACTT--TG-AT-------------------------------------------GCAAAGTACC-------------------------------------CTCGTCAAGGGTACAATTAGACGATATT-----A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT-GGTTT------ATGT-----------------------------------ACGTCGACAGTTATTTAAAGGTC-----AAATGTGATTTCCAA------------------------------------------------------------------------------------TTGAATTTATGT-ACCTCCAATTGTT---------G-T-ATTTTCCAGACTCATTAC-GTTAGCATGACCGACATTGATGCGAGTGCTAAACAGCAACA
droYak3 4:888987-889281 - T--GTTACACACTT-------TTCAACGAATCTAGTATACCATTTTAATT--T-------TCGAGTAACAAGCTTAAAAATG----------TATATACTTTATGGGTTGGTACTTGTCTCATTCACTT--TA-AT-------------------------------------------GCAAAGTACA-------------------------------AGTACAAAGTTCAAGGGTACAATTGGACCATTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGGTTTT------ATGT-----------------------------------TCGACAATCGTCATTTAAAGATC-----AAATGCTATTTCCAAACA---TTG---------------------------------------------------------------------------TTGAATTTATGT-ACCTTTAATTTTT---------GTTTTTTTTTCAGACCCATTAC-GATAGCATGACCGACATTGATGCGAGTGCTCAACAGCAACA
droEug1 scf7180000409155:87731-87924 + C--GTTACATACTT-------TTCAACGAATCTAGTAAACCCTTTTACTC--C-------ACGAGTAACGGGTATAATTAGC----------GT-A----------C-ACGACGAATG-----------------------------------------CAACTTGAAGCT----GTTGGCGACGTTTG------------------------------------------------------------------------------------GTAAA-----------------------------------------------------------------------------------------------------------CTTTAGAGTGTTTT---------------------------------TATGTT-----------------------------------------------------------------------------------ATTCCGGT------AGT------------------------------------------------------------CTAGAC-----ACCTTTCCACT-GCAA-A------------CAATTTTTTA-T-GTTTTTCAGAACCATTAT-GAT--------------------------------------
droBia1 scf7180000302087:320896-321136 - T--GTTACATACTT-------TCCGACAAATCTAGTATACCCTTTAACTC--T-------ACGAATAACAGGTATAATTAAA----------GT-G-------ATGGTTGGATGTTCTCTTAATTACTG--ACTAG-------------------------------------------TTAAAAGGTA-------------------------------ACAAAAA-------------ATTTCTGCAATTG--------------------------------------------------------------------------------------------------------------------AGGAATGGT----GATATTTGGATGGTTTT---------------------------------CA--------------------------------------------------------------------------------------GGTTTTTAACAA---GTT---------------------------------------------------------------------------TTGAAATTGTTAAAATTTT----GGGCAAT-----ATTTTGTATCGAGGCACCTTAT-GATAGTGCCTGTG-------------------ACAATAATG
droTak1 scf7180000415722:353369-353562 - T--GTTACATACTT-------TTGCACGAATCTAATATACCCTTTTACTC--T-------ACGAGTAACGGGTATAATAAATTGGGAAAATATAT-------------ATGTGAAATACC------------------------TA--TAGAATGAAAATATCATAG----------------------------------------------------------------------------------AT-----------------------------------ATTTTTGGGTATTA-----------------------------------------------------------------------------------------------------------------------------------AT----------------------------------------------------------------------------CTGACAAA----AT--------A---TTT--C-----A------------------------------------------------------------------TAAAATTAATAA-ATCTTT---T--------------------------TCCATTAT-TTTAATATAACCCATGTTAATAC------------------
droEle1 scf7180000490740:3775-4022 - C--GTTGCAAACTT-------CTGACCGAAAATAGAATACCCT------C--T-------GCA-----AGCGTATAAAAAGC----------G-------------------AAA------------TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTTTTGAATTTATTTTTCCGATTGCTTCCAAAG-----------GAGGAATATGAAATAGACGTTTGATATTTTGTATTTTTTTT-----------------T--------------ATTTTTTGACTT---ATT--AATAATTTGACATTTTAGAATTACGCTTTTAATTCTATTAAAATCGGAAAACGATA-----------------------------------------------------------------------------TCGTATAGCTGTCATAGAAACTATCGAATACCTGCAATA
droRho1 scf7180000779177:6899-7114 + T--GTTACATACTT-------TTGCACGAATACAATATACCCTTTTACTC--T-------ACGAGTAACGGGTATAATGATTTGTTCAAATATAT-------------AAGATTAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATGAAAAT----------------------------------ATGAATTTGTATGCCTCATGTTCGATAATTTTTTGTG-----------ATGA-----------------------------------AA-----------------AATT-----AGCCGATATATTGGC---------------------------------------------------------------------------------------AGTTTGTGT-A-TTTT---TGTT--------------CTCTATACACACAATAC-AATAC-GTGGGTCGAATTGATG-------------------
droFic1 scf7180000451474:15018-15217 + C--ATGGCAAACTT-------CTGACTGAAATTATAATACCCTT-TGCTC--T-------GCA-----AGGGTATAAAAATA----------A-------------------CAA------------CC--AAATT---------------------------------------TTT----AA----A---------ATGGACTTG-TGCCGTCATGCAACGACAA-------------AGTTAAATTCGAATTTTTTCATTGGC--------------------ATTTTTATTT---------------------------------------------------------------------------------------------------------------------------------------------ATTC------ATAA-----------------------------------CT-----------------GGTT-----GGGTTCCAT-----------------------TTAAAATTT----------------------------------------------------------TT-GGTTTA---------------CG---------G-TTTTTTTTTAAATTCCTT--------------------------------------------
droKik1 scf7180000302766:72451-72683 + T--ACTGATG-TTT-------TTTTATG------------------------------------TTATATAATATAGTAGGA----------CG------------GTT------------------------------------------------------------------TTT----AA----A---------AAATTCTAA-AATTGTTATATCTCAAAAT-------------AGATGAATT------------------------------------------------------------AAAAAA---------------------------------------AACATCGAAATC---------------------------------CAGTTTTTTCC---------------------ATATATTTTT------CTGA-----------------------------------AC-----------------TTTT-----CTCTGGCAGCTACATACA---TATATT-----C--TCA-------------------------------------------------------------TTTAATGCATAT-TACTCT---TTTA---------T-TTTCCTTATAGTCCCATTAC-GACGGCATGACAGACATTG------------AACAGCAACA
droAna3 scaffold_13045:1125890-1126072 - C--GTTGCACACTT-------TTGACCAAAATCATAATACCCT------C--T-------GCA-----AGGGTATACAAATT----------A-------------------AAATATCCTGTGCGTTTATAATTTGCGATGTCTA--------------------------------------------------------------------------TCAA-CA-------------AGATAAACACCTTG-----C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTT-GTGGTGTAAAT--------------------------------------------------------------TTGGAGGA----AT--------CCTGTTT---------------------------------------------------------------------------TTGACATGGCTA-ACTTTT---TGTT---------G-C-TTTATTCAGAGTCGATAC------------------------------------------
droBip1 scf7180000395958:107718-107941 - C--GTTGCACACTT-------TTGGACAAAATTATAATACCCT------C--T-------GCA-----AGGGTATAAAAATC----------A-------------------TAT------------AC--CT---------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTT--GCATTTTGTTGGCCCATTATTATTATCGCATTAACAGTTTTTCCCGCTGTATTCCAGCCA------------TTCCAGCAGTAA----GCCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTG-GT-AAGTTTGCCGTTT---------G-TTTTTTTTTAGCCATCTTT--TGTACCATAATTGAGGCTAAAGACAGCGGTCAATATCGATA
dp5 4_group4:4552805-4552979 + C--GTTACACACATCCACTTTTACCACAAATCTAATATACCCCAATACTCATT-------TTGAGTATCGGGTATAAAAATA----------CT------------GATCTAAAATAT-----------------------------------------------------------T--------------------------------------------GA-AA-------------AGGAAAAAGATTTA-----C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTAATTTA------ATAA-----------------------------------AC-------------------TC-----AAATATATTTTTCATTA----TTT---------------------------------------------------------------------------TTTTGTTT--------TTT---TCTT---------G-CTATTTTTCTAGTC------------------------------------------------
droPer2 scaffold_3:330116-330306 - C--GTTACACACATCCACTTTCACCACAAATCTAATGTACCCCAATACTCATT-------TTGAGTATCGGGTATAATAAGA----------AT-A-----------TTCAGCAAAGA------------------------------------------------------------------------------------------------------------C-------------AGATAGACAGCTGGTTTT-C--TGGTACTTTTGATAGACCTGGGATATTTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT---------------------------------------------------------------------------TTTAGATAGGAC-A-C------TATT---------A-TTATCACATAGTTTCATTACGAATAGCACAAC------------------------------
droWil2 scf2_1100000004963:3253928-3254135 - T--GTTACATACAT-------TTTGGCGACTTTAATATACCAATTCACCC--T-------ATGGGTGTATGGTATAAAAATT----------TA-------------------AT------AACCATTC--ATTGG-------------------------------------------CTCACACTTGGCAAACAATGATTA-----------------ATGA----------------AAATGGATTTTAAAATTTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTT------AAG--------------------------------------------------------TTC-----ATATTAAATTATGAGATG---CTT---------------------------------------------------------------------------CTTTTTTTCTGG-CGTCTTTTTTGAC---------G-T-CTTTTTCACGTTTTTTTT-GGT--------------------------------------
droVir3 scaffold_13236:102-285 + C--GTTACATATTT-------CAGGACAAAATTATAATACCCT------C--T-------GCA-----AGGGTATAAAAAAA----------TT---------------CA--AAAATG-----------------------------------------------------------------------------------ACTTT-------------------------------------------------------------------------------------AGACTCTA------------------------------------------------------------------CCCCAACAAGAAGGGGGATAAATTTATACTATT-A------------------------------ATTC-GTTCT------ATAT-----------------------------------ACAAAGATAT-----------------------------------A---TAT---------------------------------------------------------------------------T------AATAT-ATATGT---AACA---------T-TTTTTTTTCTGTTTCACTGC-ACTTGCACGA-------------------------------
droMoj3 scaffold_6540:7294959-7295177 + T--GTTACATACAT-------TTCAACAAAACCATTATACCCTGATTTCC--CATTGAAAATGGGTTCAGGGTATAAAAACG----------C---------------TTGCGAAATTCT-------------------------TTCCAAAAGGAATGTTCCATGC----GTAG----CGCA--------------------------------------------------------------TACGATTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTT------------------------------------------------------------------------------------GATTGTTCAGGA----CTG-------------------------T-------------------TTGGCAAATGAAAATTTAAAGCCTTTA---TTGGGAGAATGC-AAA----------CAAATTGTGG-C-TTTTTTTAAGAGCAGTAC-CATTGC-----------------------------------
droGri2 scaffold_14906:9265462-9265633 - T--GTAACATACTC-------TTGCACAACTTCATTATACCTTTTG-CAC--CGTTTTT-AATGGTTAAGGGTATCAAAATT----------G-------------------CGC------------TT--CGCTT-------------------------------------------GTGAGATATC---------ATGGATTGTTGGCTGTTT---------------------------------TTGAGCTGTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGT------------TGAATT---CGT---------------------------------------------------------------------------TTGGGTTTTGGC-GGCTTT---CTTT---------T-TTTTTTTTTTGTTTTGTT--------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
T--GTTACATACTT-------TTCTACGAATCTAGTATATTAACTTCCTA--T-------ACGAGTTACGGGTATAAAAATG----------TG------------GATTGCAAATGTCTCATTCACTT--TGTTT-------------------------------------------GCAAAGTACG-------------------------------ACGACAA-------------AGTTAGACGATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGTTTT------ATGG-----------------------------------AC-----------------GGTC-----AAATGATATCTTCAGACA---TTT---------------------------------------------------------------------------TTGAGTTTATGA-AGCTTT---TGTT---------G-TCTTTTTTCAGGTCCATTAC-GATAGCATGACCGACATTGATGCGAGTGCTCAACAGCAACASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................TACGGGTATAAAAATG----------TG------------GATTGCAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300000000100020000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTTT------ATGG-----------------------------------AC-----------------GGTC-----AAATGATA..............................................................................................................................................................................................2611.00100000001000000000
............................................................................AAAATG----------TG------------GATTGCAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTTATGA-AGCTTT---TGTT---------G-TCTT..........................................................2611.00100000000010000000
......................................................................................................................................TT-------------------------------------------GCAAAGTACG-------------------------------ACGACAA-------------AGTTAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTTTT------ATGG-----------------------------------AC-----------------GGTC-----AAA...................................................................................................................................................................................................2311.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTTTCAGGTCCATTAC-GATA.....................................2411.00100000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGA-AGCTTT---TGTT---------G-TCTTTT........................................................2111.00100000000001000000
..................................................................TACGGGTATAAAAATG----------TG------------GATTGCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
.........................................................................................................................................................................................TACG-------------------------------ACGACAA-------------AGTTAGACGATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT.......................................................................................................................................................................................................................................................................................2711.00100000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCGAGTGCTCAACAGCA...2011.00100000000001000000
.......................................................................................................................................T-------------------------------------------GCAAAGTACG-------------------------------ACGACAA-------------AGTTAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
.....TACATACTT-------TTCTACGAATCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.25100010000000000000
............................................................ACGAGTTACGGGTATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16100.10100000000001000000
droSec2
T--GTTACATACTT-------TTCTACGAATCTAGTATATTAAATTCCTA--T-------ACGAGTTACGGGTATAAAAATG----------TG------------GATTGCAAATGTTTCATTCATTT------------------------------------------------------------------------------------------------------------------------ATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGTTTT------ATGG-----------------------------------AC-----------------GGTC-----AAATGATATCTTCAGACA---TTT---------------------------------------------------------------------------TTGAGTTTATGT-AGCTTT---TGTT---------G-TCTTTTTTCAGGTCCATTAC-GATAGCATGACCGACATTGATGCGAGTGCTCAACAGCAACASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
T--GTTACATACTT-------TTCAACGAATCTAGTATATTGATTTTCTC--C-------ACGAGTAACGGGTATAAAAATG----------TG------------GATTGCAAATGTCTCATTTACTT--TGTGT-------------------------------------------GCAATATACG-------------------------------ACGAAAT-------------AGTTAGACGACTTC-----A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGTTTT------ATGG-----------------------------------AC-----------------GGTC-----AAATGATATCTTCAGAC----TTT---------------------------------------------------------------------------TTGAGTTTACGT-ACCTCT---TGTT---------G-TCTTTTTTCAGGCTCATTAC-GATAGCATGACCGACATTGATGCGAGTGCTCAACAGCAACASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGCGAGTGCTCAACAG.....2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000200000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCAGAC----TTT---------------------------------------------------------------------------TTGAGTTTACGT-......................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................AATATACG-------------------------------ACGAAAT-------------AGTTAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTCAGGCTCATTAC-GATAGCATG................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TAGTATATTGATTTTCTC--C-------ACGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGAGTGCTCAACAGCAAC.2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000001000000000000000000000000000000000
........................................................................TATAAAAATG----------TG------------GATTGCAAATGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT------ATGG-----------------------------------AC-----------------GGTC-----AAATGATATCT...........................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TAACGGGTATAAAAATG----------TG------------GATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TGT-------------------------------------------GCAATATACG-------------------------------ACGAAAT-------------AGTTAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGACATTGATGCGAGTGCTCAA........2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTTCAGAC----TTT---------------------------------------------------------------------------TTGAGTTTACGT-......................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTTTT------ATGG-----------------------------------AC-----------------GGTC-----AAATGAT...............................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGCTCATTAC-GATAGCATGACCGAC..........................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTAC-GATAGCATGACCGACA.........................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCTCATTAC-GATAGCATGACCGA...........................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TC-----A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGTTTT------ATGG-----------------------------------AC-----------------GG.............................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG-----------------------------------AC-----------------GGTC-----AAATGATATCTTCAGAC----TT...............................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAC-GATAGCATGACCGACATTGAT....................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TT--TGTGT-------------------------------------------GCAATATACG-------------------------------ACGAAAT-------------AG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TGATTTTCTC--C-------ACGAGTAACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTTCAGAC----TTT---------------------------------------------------------------------------TTGAGTTT...........................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TTAGACGACTTC-----A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGTTT................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..................................................................AACGGGTATAAAAATG----------TG------------GATTGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TGTGT-------------------------------------------GCAATATACG-------------------------------ACGAAAT-------------AG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................T-------------AGTTAGACGACTTC-----A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGTTTT------A........................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................T-------------------------------------------GCAATATACG-------------------------------ACGAAAT-------------AGTTAGACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG-----------------------------------AC-----------------GGTC-----AAATGATATCTT..........................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AAAT-------------AGTTAGACGACTTC-----A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT.......................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGAC----TTT---------------------------------------------------------------------------TTGAGTTTACGT-ACCTCT---.............................................................................2813.0030000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................TAAAAATG----------TG------------GATTGCAAATGTCTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................CTT--TGTGT-------------------------------------------GCAATATACG-------------------------------ACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000020000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGAGTGCTCAACAGCAACA2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGACATTGATGCGAGTGCTCA.........2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
...................................................................................................................................................................................GCAATATACG-------------------------------ACGAAAT-------------AGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGACATTGATGCGAGTGCTCAAC.......2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTTTCAGGCTCATTAC-GATAGCAT.................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................ATATACG-------------------------------ACGAAAT-------------AGTTAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020000000000000000000000000000000000000000000000000000
................................................................GTAACGGGTATAAAAATG----------TG------------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAGGCTCATTAC-GATAGCATG................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTTTT------ATGG-----------------------------------AC-----------------GGTC-----AAATG.................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTTT------ATGG-----------------------------------AC-----------------GGTC-----AAA...................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGAGTGCTCAACAGCAA..2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT------ATGG-----------------------------------AC-----------------GGTC-----AAATGATATC............................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTACGT-ACCTCT---TGTT---------G-TCTTTTTT......................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................ACGGGTATAAAAATG----------TG------------GATTGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TACG-------------------------------ACGAAAT-------------AGTTAGACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTACGT-ACCTCT---TGTT---------G-T.............................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TCATTTACTT--TGTGT-------------------------------------------GCAATATAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TAGACGACTTC-----A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGTTTT------ATGG-----------------------------------AC-----------------GG.............................................................................................................................................................................................................3013.0030000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................AAT-------------AGTTAGACGACTTC-----A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGG...................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................GACTTC-----A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGTTTT------ATGG-----------------------------------AC-----------------GG.............................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT---------------------------------------------------------------------------TTGAGTTTACGT-ACCTCT---TGTT---------G-TC............................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................AAT-------------AGTTAGACGACTTC-----A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACGT-ACCTCT---TGTT---------G-TCTTTT........................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TGATTTTCTC--C-------ACGAGTAACGGGTATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TC-----A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGTTTT------ATGG-----------------------------------AC-----------------GGTC-----AAAT..................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TG------------GATTGCAAATGTCTCATTTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................CTTC-----A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGTTTT------ATGG-----------------------------------..................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CGGGTATAAAAATG----------TG------------GATTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
droEre2
TTTGTTACATACTT-------TTTAACGAACCTAGTATACCATTTTTTTT--T-TTTTT-TTGAGTAACGGGTGTAAAAATG----------TGTATACGTTATGCGTTCGCAAATTTCTCGTTCACTT--TG-AT-------------------------------------------GCAAAGTACC-------------------------------------CTCGTCAAGGGTACAATTAGACGATATT-----A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT-GGTTT------ATGT-----------------------------------ACGTCGACAGTTATTTAAAGGTC-----AAATGTGATTTCCAA------------------------------------------------------------------------------------TTGAATTTATGT-ACCTCCAATTGTT---------G-T-ATTTTCCAGACTCATTAC-GTTAGCATGACCGACATTGATGCGAGTGCTAAACAGCAACASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
T--GTTACACACTT-------TTCAACGAATCTAGTATACCATTTTAATT--T-------TCGAGTAACAAGCTTAAAAATG----------TATATACTTTATGGGTTGGTACTTGTCTCATTCACTT--TA-AT-------------------------------------------GCAAAGTACA-------------------------------AGTACAAAGTTCAAGGGTACAATTGGACCATTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGGTTTT------ATGT-----------------------------------TCGACAATCGTCATTTAAAGATC-----AAATGCTATTTCCAAACA---TTG---------------------------------------------------------------------------TTGAATTTATGT-ACCTTTAATTTTT---------GTTTTTTTTTCAGACCCATTAC-GATAGCATGACCGACATTGATGCGAGTGCTCAACAGCAACASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTCAGACCCATTAC-GATAGCA..................................2511.00101000000000
droEug1
C--GTTACATACTT-------TTCAACGAATCTAGTAAACCCTTTTACTC--C-------ACGAGTAACGGGTATAATTAGC----------GT-A----------C-ACGACGAATG-----------------------------------------CAACTTGAAGCT----GTTGGCGACGTTTG------------------------------------------------------------------------------------GTAAA-----------------------------------------------------------------------------------------------------------CTTTAGAGTGTTTT---------------------------------TATGTT-----------------------------------------------------------------------------------ATTCCGGT------AGT------------------------------------------------------------CTAGAC-----ACCTTTCCACT-GCAA-A------------CAATTTTTTA-T-GTTTTTCAGAACCATTAT-GAT--------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
T--GTTACATACTT-------TCCGACAAATCTAGTATACCCTTTAACTC--T-------ACGAATAACAGGTATAATTAAA----------GT-G-------ATGGTTGGATGTTCTCTTAATTACTG--ACTAG-------------------------------------------TTAAAAGGTA-------------------------------ACAAAAA-------------ATTTCTGCAATTG--------------------------------------------------------------------------------------------------------------------AGGAATGGT----GATATTTGGATGGTTTT---------------------------------CA--------------------------------------------------------------------------------------GGTTTTTAACAA---GTT---------------------------------------------------------------------------TTGAAATTGTTAAAATTTT----GGGCAAT-----ATTTTGTATCGAGGCACCTTAT-GATAGTGCCTGTG-------------------ACAATAATGSizeHit CountTotal NormTotal
No Reads
droTak1
T--GTTACATACTT-------TTGCACGAATCTAATATACCCTTTTACTC--T-------ACGAGTAACGGGTATAATAAATTGGGAAAATATAT-------------ATGTGAAATACC------------------------TA--TAGAATGAAAATATCATAG----------------------------------------------------------------------------------AT-----------------------------------ATTTTTGGGTATTA-----------------------------------------------------------------------------------------------------------------------------------AT----------------------------------------------------------------------------CTGACAAA----AT--------A---TTT--C-----A------------------------------------------------------------------TAAAATTAATAA-ATCTTT---T--------------------------TCCATTAT-TTTAATATAACCCATGTTAATAC------------------SizeHit CountTotal NormTotal
No Reads
droEle1
C--GTTGCAAACTT-------CTGACCGAAAATAGAATACCCT------C--T-------GCA-----AGCGTATAAAAAGC----------G-------------------AAA------------TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTTTTGAATTTATTTTTCCGATTGCTTCCAAAG-----------GAGGAATATGAAATAGACGTTTGATATTTTGTATTTTTTTT-----------------T--------------ATTTTTTGACTT---ATT--AATAATTTGACATTTTAGAATTACGCTTTTAATTCTATTAAAATCGGAAAACGATA-----------------------------------------------------------------------------TCGTATAGCTGTCATAGAAACTATCGAATACCTGCAATASizeHit CountTotal NormTotal
No Reads
droRho1
T--GTTACATACTT-------TTGCACGAATACAATATACCCTTTTACTC--T-------ACGAGTAACGGGTATAATGATTTGTTCAAATATAT-------------AAGATTAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATGAAAAT----------------------------------ATGAATTTGTATGCCTCATGTTCGATAATTTTTTGTG-----------ATGA-----------------------------------AA-----------------AATT-----AGCCGATATATTGGC---------------------------------------------------------------------------------------AGTTTGTGT-A-TTTT---TGTT--------------CTCTATACACACAATAC-AATAC-GTGGGTCGAATTGATG-------------------SizeHit CountTotal NormTotal
No Reads
droFic1
C--ATGGCAAACTT-------CTGACTGAAATTATAATACCCTT-TGCTC--T-------GCA-----AGGGTATAAAAATA----------A-------------------CAA------------CC--AAATT---------------------------------------TTT----AA----A---------ATGGACTTG-TGCCGTCATGCAACGACAA-------------AGTTAAATTCGAATTTTTTCATTGGC--------------------ATTTTTATTT---------------------------------------------------------------------------------------------------------------------------------------------ATTC------ATAA-----------------------------------CT-----------------GGTT-----GGGTTCCAT-----------------------TTAAAATTT----------------------------------------------------------TT-GGTTTA---------------CG---------G-TTTTTTTTTAAATTCCTT--------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
T--ACTGATG-TTT-------TTTTATG------------------------------------TTATATAATATAGTAGGA----------CG------------GTT------------------------------------------------------------------TTT----AA----A---------AAATTCTAA-AATTGTTATATCTCAAAAT-------------AGATGAATT------------------------------------------------------------AAAAAA---------------------------------------AACATCGAAATC---------------------------------CAGTTTTTTCC---------------------ATATATTTTT------CTGA-----------------------------------AC-----------------TTTT-----CTCTGGCAGCTACATACA---TATATT-----C--TCA-------------------------------------------------------------TTTAATGCATAT-TACTCT---TTTA---------T-TTTCCTTATAGTCCCATTAC-GACGGCATGACAGACATTG------------AACAGCAACASizeHit CountTotal NormTotal
No Reads
droAna3
C--GTTGCACACTT-------TTGACCAAAATCATAATACCCT------C--T-------GCA-----AGGGTATACAAATT----------A-------------------AAATATCCTGTGCGTTTATAATTTGCGATGTCTA--------------------------------------------------------------------------TCAA-CA-------------AGATAAACACCTTG-----C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTT-GTGGTGTAAAT--------------------------------------------------------------TTGGAGGA----AT--------CCTGTTT---------------------------------------------------------------------------TTGACATGGCTA-ACTTTT---TGTT---------G-C-TTTATTCAGAGTCGATAC------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................TTGACCAAAATCATAATACCCT------C--T-------GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102020000
...........................AAAATCATAATACCCT------C--T-------GCA-----AGGGTAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051010000
................................CATAATACCCT------C--T-------GCA-----AGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
droBip1
C--GTTGCACACTT-------TTGGACAAAATTATAATACCCT------C--T-------GCA-----AGGGTATAAAAATC----------A-------------------TAT------------AC--CT---------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTT--GCATTTTGTTGGCCCATTATTATTATCGCATTAACAGTTTTTCCCGCTGTATTCCAGCCA------------TTCCAGCAGTAA----GCCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTG-GT-AAGTTTGCCGTTT---------G-TTTTTTTTTAGCCATCTTT--TGTACCATAATTGAGGCTAAAGACAGCGGTCAATATCGATASizeHit CountTotal NormTotal
No Reads
dp5
C--GTTACACACATCCACTTTTACCACAAATCTAATATACCCCAATACTCATT-------TTGAGTATCGGGTATAAAAATA----------CT------------GATCTAAAATAT-----------------------------------------------------------T--------------------------------------------GA-AA-------------AGGAAAAAGATTTA-----C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTAATTTA------ATAA-----------------------------------AC-------------------TC-----AAATATATTTTTCATTA----TTT---------------------------------------------------------------------------TTTTGTTT--------TTT---TCTT---------G-CTATTTTTCTAGTC------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................TACCACAAATCTAATATACCCCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24201.052102100000000
............................................................TTGAGTATCGGGTATAAAAATA----------CT------------GATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
....................TTACCACAAATCTAATATACCCCAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.801600000001600
.....................TACCACAAATCTAATATACCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.801601600000000
.................................................CATT-------TTGAGTATCGGGTATAAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.551101100000000
....................TTACCACAAATCTAATATACCCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.3570061000000
...................TTTACCACAAATCTAATATACCCCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.2550050000000
.....TACACACATCCACTTTTACCACAAATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.2040040000000
..................TTTTACCACAAATCTAATATACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2040400000000
.............................................TACTCATT-------TTGAGTATCGGGTAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2040400000000
....................TTACCACAAATCTAATATACCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000010000
............................................................TTGAGTATCGGGTATAAAAATA----------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
.......................CCACAAATCTAATATACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510001000000
.................................................CATT-------TTGAGTATCGGGTATAAAAATA----------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000001000
..................................ATATACCCCAATACTCATT-------TT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
.............TCCACTTTTACCACAAATCTAATATAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510010000000
...............................CTAATATACCCCAATACTCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000010
droPer2
C--GTTACACACATCCACTTTCACCACAAATCTAATGTACCCCAATACTCATT-------TTGAGTATCGGGTATAATAAGA----------AT-A-----------TTCAGCAAAGA------------------------------------------------------------------------------------------------------------C-------------AGATAGACAGCTGGTTTT-C--TGGTACTTTTGATAGACCTGGGATATTTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT---------------------------------------------------------------------------TTTAGATAGGAC-A-C------TATT---------A-TTATCACATAGTTTCATTACGAATAGCACAAC------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................CATT-------TTGAGTATCGGGTATAATAAGA----------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2731.003300000
.............TCCACTTTCACCACAAATCTAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.501010000
...............................................CTCATT-------TTGAGTATCGGGTATAATAAGA----------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2930.331010000
C--GTTACACACATCCACTTTCACCACAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.204040000
...........................AAATCTAATGTACCCCAATACTCATT-------T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27120.172020000
...............................................CTCATT-------TTGAGTATCGGGTATAATAAGA----------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.153030000
...............................CTAATGTACCCCAATACTCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.081010000
...........................AAATCTAATGTACCCCAATACTCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25120.081010000
............................AATCTAATGTACCCCAATACTCATT-------T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26120.081010000
...........................AAATCTAATGTACCCCAATACTCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.081010000
................................TAATGTACCCCAATACTCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.081010000
................................TAATGTACCCCAATACTCATT-------T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22130.081010000
................................................TCATT-------TTGAGTATCGGGTATAATAAGA----------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051010000
.............TCCACTTTCACCACAAATCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
droWil2
T--GTTACATACAT-------TTTGGCGACTTTAATATACCAATTCACCC--T-------ATGGGTGTATGGTATAAAAATT----------TA-------------------AT------AACCATTC--ATTGG-------------------------------------------CTCACACTTGGCAAACAATGATTA-----------------ATGA----------------AAATGGATTTTAAAATTTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTT------AAG--------------------------------------------------------TTC-----ATATTAAATTATGAGATG---CTT---------------------------------------------------------------------------CTTTTTTTCTGG-CGTCTTTTTTGAC---------G-T-CTTTTTCACGTTTTTTTT-GGT--------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
C--GTTACATATTT-------CAGGACAAAATTATAATACCCT------C--T-------GCA-----AGGGTATAAAAAAA----------TT---------------CA--AAAATG-----------------------------------------------------------------------------------ACTTT-------------------------------------------------------------------------------------AGACTCTA------------------------------------------------------------------CCCCAACAAGAAGGGGGATAAATTTATACTATT-A------------------------------ATTC-GTTCT------ATAT-----------------------------------ACAAAGATAT-----------------------------------A---TAT---------------------------------------------------------------------------T------AATAT-ATATGT---AACA---------T-TTTTTTTTCTGTTTCACTGC-ACTTGCACGA-------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................TG-----------------------------------------------------------------------------------ACTTT-------------------------------------------------------------------------------------AGACTCTA------------------------------------------------------------------CCCCAACAAGAA..............................................................................................................................................................................................................................................................................................................................................2740.251000000000000000000000000000000000000010000000000000000000000000
droMoj3
T--GTTACATACAT-------TTCAACAAAACCATTATACCCTGATTTCC--CATTGAAAATGGGTTCAGGGTATAAAAACG----------C---------------TTGCGAAATTCT-------------------------TTCCAAAAGGAATGTTCCATGC----GTAG----CGCA--------------------------------------------------------------TACGATTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTT------------------------------------------------------------------------------------GATTGTTCAGGA----CTG-------------------------T-------------------TTGGCAAATGAAAATTTAAAGCCTTTA---TTGGGAGAATGC-AAA----------CAAATTGTGG-C-TTTTTTTAAGAGCAGTAC-CATTGC-----------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAATGC-AAA----------CAAATTGTGG-..............................................................2211.001100000
...........................AAAACCATTATACCCTGATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.153300000
........................................CCTGATTTCC--CATTGAAAATGGGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.102000020
........................AACAAAACCATTATACCCTGATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
...........................AAAACCATTATACCCTGATTTCC--....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000010
.........................ACAAAACCATTATACCCTGATTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
droGri2
T--GTAACATACTC-------TTGCACAACTTCATTATACCTTTTG-CAC--CGTTTTT-AATGGTTAAGGGTATCAAAATT----------G-------------------CGC------------TT--CGCTT-------------------------------------------GTGAGATATC---------ATGGATTGTTGGCTGTTT---------------------------------TTGAGCTGTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGT------------TGAATT---CGT---------------------------------------------------------------------------TTGGGTTTTGGC-GGCTTT---CTTT---------T-TTTTTTTTTTGTTTTGTT--------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 02:33 AM