ID:

dsi_24930

 Coordinate:

3r:15780457-15780606 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.1 -25.8 -25.8

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ATACCCACACTCAATTAATTGCAGCTGAATGCACGACTCCTTGCAGAAAGGTGAATATATTTCAAACTAGTCATAAGTTCTTGGATTAAGCATAGTTTAGCATAAGGCAGGTACATGTTGTGGTTCTCAGAATTCTCTAATTCAGAAAGGGTAATTCCTTTTTTTTGTATCTTTCACATTGAAAGTATTCGTATTCAAACTTTGATGGGATGAGGAAATATGCCCAAATTTATTTGTTGAATGATTCAAA
**************************************************.(((((((......(((((...(((.((.((((..(((.((........)).)))..)))).)).)))..)))))....(((((....)))))((((((((....)))))))).......((((((...)))))).....)))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
..............TTAATTGCAGCTGAATGCACGACTCC.................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................GTTTAGCATAAGGCAGGTACATGTT................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
.............................TGCACGACTCCTTGCAGAAAGAAGGA................................................................................................................................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0
.............................TGCACGACTCCTTGCAGAAAGAAGG.................................................................................................................................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0
..............................GCACGACTCCTTGCAGAAAGAAGGAT.................................................................................................................................................................................................. 26 3 1 1.00 1 0 0 0 1 0 0
........ACTCAATTAATTGCAGCTGAATGCAC........................................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0
..............TTAATTGCAGCTGAATGCACGACTCCT................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0
..............TTAATTGCAGCTGAATGCACGA...................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
.................................................GGTGAATATATTTCAA......................................................................................................................................................................................... 16 0 2 0.50 1 0 0 1 0 0 0
.................................................GGTGAATATATTTCAATGTAGA................................................................................................................................................................................... 22 3 3 0.33 1 0 0 1 0 0 0
.........................................................................................................................................TAATTCAGAAAGGGAAA................................................................................................ 17 1 5 0.20 1 0 0 1 0 0 0
................................................................................................................................................GATAGGGTAATTCCGTTTTA...................................................................................... 20 3 5 0.20 1 0 0 1 0 0 0
.................................................................................................................................................ATAGGGTAATTCCGTTTTA...................................................................................... 19 3 20 0.10 2 1 0 1 0 0 0
....................................................................................................................................................................................................AAACTTCGATGGGGTGA..................................... 17 2 14 0.07 1 0 0 0 0 1 0
.............................TTCAGGACTACTTGCAGAAA......................................................................................................................................................................................................... 20 3 15 0.07 1 0 0 0 0 0 1

Anti-sense strand reads

TATGGGTGTGAGTTAATTAACGTCGACTTACGTGCTGAGGAACGTCTTTCCACTTATATAAAGTTTGATCAGTATTCAAGAACCTAATTCGTATCAAATCGTATTCCGTCCATGTACAACACCAAGAGTCTTAAGAGATTAAGTCTTTCCCATTAAGGAAAAAAAACATAGAAAGTGTAACTTTCATAAGCATAAGTTTGAAACTACCCTACTCCTTTATACGGGTTTAAATAAACAACTTACTAAGTTT
**************************************************.(((((((......(((((...(((.((.((((..(((.((........)).)))..)))).)).)))..)))))....(((((....)))))((((((((....)))))))).......((((((...)))))).....)))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
......................................................................................................................ACACCAAGAGTCTTAAGAGAT............................................................................................................... 21 0 1 5.00 5 5 0 0 0 0 0 0
.............................................................................................................CCATGTACAACACCAAGAGTC........................................................................................................................ 21 0 1 2.00 2 1 1 0 0 0 0 0
........................................................................................................................ACCAAGAGTCTTAAGAGATT.............................................................................................................. 20 0 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................................CAAGAGTCTTAAGAGATTAAG........................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
..........................................................................TTCAAGAACCTAATTCGTATC........................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0
...................................................................................................................ACAACACGACGAATCTTAAGAGA................................................................................................................ 23 3 1 1.00 1 0 0 1 0 0 0 0
........................................................................................................................ACCAAGAGTCTTAAGAGATTA............................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................ATATTCAAGAACCTGACTCGT.............................................................................................................................................................. 21 3 3 0.33 1 0 0 0 0 1 0 0
..............................................................................................................................................................AAAAAAAACTTAGAAAGCGT........................................................................ 20 2 6 0.17 1 0 0 0 0 1 0 0
.................................................................TGAGCAGTAGTCAAGAGCC...................................................................................................................................................................... 19 3 8 0.13 1 0 0 1 0 0 0 0
........................................................................................................................................................................................................................................AAGCAACTTACTAAGT.. 16 1 9 0.11 1 0 0 0 0 1 0 0
...................................................................................................CGTTTTCGGTCCATGTGCA.................................................................................................................................... 19 3 16 0.06 1 0 0 0 0 0 0 1
...............................................................................................................................................................AAAAAAACCTAGAAAG........................................................................... 16 1 20 0.05 1 0 0 0 0 0 1 0
..................................................................................................................................TTAAGGGGTTAAGTCTT....................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:15780407-15780656 - dsi_24930 ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTCA-AACTAGTCATAAGT-------TCTTGG-ATTAAGCATAGTTTAGCATAAGGCAGG-------------TACATGTTGTGGTTCTC------------------------------------------------------------------------------------AGAATTCTCTAATT---CAGAAAGGGTAAT-TCCTTTT-T-------------------TTTGTATCTTTCACATTGAAAGTATTCGTATTCAA-AC--------------------------------------------------------------------------------------------------------------------------------------------TTTGAT---GGGATGAGG-------------------------AAATATGCCCAAATTTATTT---------------------------------------------------------------------------------------------------------------------------------------GTTGAATGATTCAAA
droSec2 scaffold_0:16649637-16649882 - ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTCA-AACTAGTCATAAGT-------TCTTGG-ATTAAGCATAGTTTAGCATAAGGCAGG-------------------TTGTGGTTCTC------------------------------------------------------------------------------------AGAATTCTCTAATT---CAAAAAGGAAAAT-TCCTTTTTT-------------------TTTGTATCTTTCACATTGAAAGTATTCGTATTCAAAAC--------------------------------------------------------------------------------------------------------------------------------------------TTTGAT---GGGATGAGG-------------------------AAATATGCCCAAATTTATTT---------------------------------------------------------------------------------------------------------------------------------------GTTGAATGATTCAAA
dm3 chr3R:5245720-5245989 + ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTCA-AACTAGTCATAAGT-------TCTTGG-ATTAAGCATAGTTTAACATAAGGCAGG-------------TACATGTTGTGGTTCTC------------------------------------------------------------------------------------AGAATTTTCTAATG---CAGAAAGGGAAAT-TTCTTTT---------------------TTTGTATCTTTCACATTGAAAGTATCCGTATTGAT---------------------------------------------------------------------------------------------------------------------------------------------------AT---GTGACGAGG-------------------------AAATATGACTCAATTTATTTCAACATCTTT------------------------------------------------GTT-AACATTTAT-----------------------------------------------------------TCCCCGTTGAATGATTCAAA
droEre2 scaffold_4770:16357678-16357963 - ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTCA-AACTAGTCATAAGA-------TCTTGG-ATTAAGCTTAGTTTAGCATAAGGCAGG-------------TGCAAGTTGTGCTACT-CTGC----------------------------------------------------------------------------AGTCAGAATTCTCTAATG---CAGAACGGGAAGT-TACCGTT-TGCTTGGTTATCTGCAGAAATTTGTATCTTTCACATTGCAAGTATTCGTATTTAT-GC--------------------------------------------------------------------------------------------------------------------------------------------TTT---------ATGAGG-------------------------AAATACGCCAAAATC------------TTA------------------------------------------------CTTAAACGTCTAC-----------------------------------------------------------TCCTTGTTGAATGATTCAAA
droYak3 3R:9292858-9293116 + ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTCA-AACTAGTCATAAGA-------TCTTGG-ATTAAGCTTAGTTTAGCATAAGGCAGG-------------TACAAGTTGTGCTTCT-CTGCT----------------------------------------------------------------------------GTCAGAATTCTTAAATT---CAGAA----------------------------------------GTATCTA----AATCAATGTATCCAGTTTCA-ATCTTTGAATC-----------------------------------------------------------------------------------------------------------------------------------------------AAAGGGG-------------------------AAATATGCCTAAATTTATTG--GC-TTTTT------------------------------------------------ATTAAAGTTTTAT-----------------------------------------------------------TCCTTGTTGAATGATTCAAA
droEug1 scf7180000407136:453958-454299 - ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTCAAAACTAGTCATAAGA-------CCTTGG-ATTAAGCATAGTTTAGCATAAGGCAGGGACTGTCCTTGGGTACGACTTGTGGTTCT-CTACGTGTTCAAAAACGGACTTTAGAAAAGAAAACTTTGAAATTTTAAACAATT---------------------------TTCAT-ATTC----------------------------------------------------------------------------TACAGTTATA-GTCTTTGAAATACAGATGGAATATTCAGTAA---------------------------------------------------------------------------------------------------------------CTT----------------T-------------------------AATA----------TTTTG--GG-TTTTT------------------------------------------------ATAAAAGTTATATAATAATTTTTTCTATTTATTGGACTTCTTTATTTATACTTTAATTTTTATTGCAATTTCTCC-TG--------------
droBia1 scf7180000302402:7981066-7981209 + ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAAAAAGGTGAATATAT-TTCA-AACTAGTCATAAGA-------TCTTGG-ATTAAGCATAGCTTAGCATAAGGCAGGA-GCG--------TACAATTTGGGGTTCCC------------------------------------------------------------------------------------CCACTTCTCTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415811:296232-296505 - ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTCA-AACTAGTCATAAGA-------TCTTGG-ATTAAGCATAGTTTAGCATAAGGTAGGGAGTGTCCATCGGT------TTGGGTTCT-CTACTTTTTGA-AGATTTA-----------------------------------A------------------------------AGT--------------------------------------------------------------------------------------------CTTTTAAATACAGAAGAAATATTCTAAAACTTGAACTTTTTTTTATCTTCTTTT-------------------------------------------------------------CTT-CAAAGCAAAG-TATAAAAAAACTTTCAA---AAAGTAATA-------------------------AAATATG----------TTG---------------------------------------------------------------------------------------------------------------------------------------GTTGACTCATTAAAA
droEle1 scf7180000491194:414777-414987 + ATA-------CCCACACTCAA----TTAATTGCAGCCGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTCA-AACTAGTCATAAGA-------TCTCGG-CTTAAGCATAGTTTAGCATAAGGCAGGGACTATCCAGGGGT---------ACTTCT-CTACTTTTTGAAAGATTTA-----------------------------------T-------------------------AGTCAGAATTCCCCAGTTCTACATAACAGAAAATATTATTTTTT-------------------TATTTATCTTTCGCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779488:463279-463662 + ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTCA-AACTAGTCATAAGA-------TTTCGG-CTTAAGCTTAGTTTAGCATAAG-TAGGGACTGTCCAGGGGTAAAAAATGTGGTTCT-CTACTTTTTGAAAGATTTA-----------------------------------C-----------------------ACAGCCAGAATTCGCCAATTCTACAGAACAGGATA---CATTTTTT-------------------GGACTATTTTTCGCTT----------------------------------------------------------------------TTTTTAATGGATTTTATACTGCAGACTGACTTCTATAGC--------TTACAACTCAAAAATAAAACTT-CAAAATACAT-TAGGCAAAAGCTT----------------A-------------------------AATA----------GTTGG--GA-TTTTTTCGGTTTGAGCCCAAGAATATGAAGAATATTTTTTTAAGCTCGTGTGG---A------------------------------------------------------------------------AATTAAAGGCTTAAAA
droFic1 scf7180000454106:1944349-1944611 - ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAAAAAGGTGAATATAT-TTCA-AACTAGTCATAAGA-------TCTCGG-TTTAAGCATAGTTTAGCATAAGATAGGGTCTGC-CAAGGGTTCAAGATGT-------------------------A-----------------------------------AAGTCTAGAGCTCCGTTAAAATAAACAGCCAACATTTCTAAAT----------------------------------------------------------------------------------------------------------------GTCGAAC-------------------------------------------TTCTATGGTCAAAAAGCT--------------------------------------AAAAAGTTACAAACTAAAACAAAAAAATATTTCAACTTATTATTTAGGAAAATATGTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302388:1841005-1841117 - GTA-------G-----CTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAAAAAGGTGAATATAT-TTCA-AACTAGTCATAAGAATTAAGGTTTAAG-ACTAGGCTTAGTTTAAGAAATGTCAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396359:389669-389779 + CCA------CCCCACACTCAA----ATAATTGCAGCTGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTAA-AACTAGTCCTAAGA-------T--TGGTATTAAGATTAGCTTAGCATAAGGCAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 2:3175222-3175303 - ATA-------GCCACACTCAAA---TTAATTGCAGCTGTATGCACGACTCCTTGCAAAAAGGTGAATATAT-CTAAAAACTAGATGTAAGA-------TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_7:1166570-1166651 + ATA-------GCCACACTCAAA---TTAATTGCAGCTGTATGCACGACTCCTTGCAAAAAGGTGAATATAT-CTAAAAACTAGATTTAAGA-------TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004902:9757015-9757104 - ATATAATCTATCCACACTCAAATTAATAATTGCAGCTGTATGCACGACTCCTTGCAGAAAGGTGAATATTAATTTA-AACTAGAAATAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13047:665408-665514 + AGC-------CCCGCACTCAA----TTAATTGCAGCTGTATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTA---TGTGAACATAAAA-------TATGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATACTAAGTATATGTAAGCATAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:4653369-4653483 + ATTG-----CCCCGCACTCAA----TTAATTGCAGCTGTATGCACGACTCCTTGCAGAAAGGTGAATATAT-TAA--ATGTGAACATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCATATGTAAAACATACTAAGTATATGTTAGCATAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14906:5669006-5669113 - AGC-------CCCGCACTCAA----TTAATTGCAGCTGTATGCACGACTCCTTGCAGAAAGGTGAATATAT-CTAT-ATATGTACATACAT-------ACATAC-AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAAGTATATGTAAGCATAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTCA-AACTAGTCATAAGT-------TCTTGG-ATTAAGCATAGTTTAGCATAAGGCAGG-------------TACATGTTGTGGTTCTC------------------------------------------------------------------------------------AGAATTCTCTAATT---CAGAAAGGGTAAT-TCCTTTT-T-------------------TTTGTATCTTTCACATTGAAAGTATTCGTATTCAA-AC--------------------------------------------------------------------------------------------------------------------------------------------TTTGAT---GGGATGAGG-------------------------AAATATGCCCAAATTTATTT---------------------------------------------------------------------------------------------------------------------------------------GTTGAATGATTCAAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................TTAATTGCAGCTGAATGCACGACTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
...................................................................................................................GTTTAGCATAAGGCAGG-------------TACATGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
...............ACTCAA----TTAATTGCAGCTGAATGCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
.........................TTAATTGCAGCTGAATGCACGACTCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
.........................TTAATTGCAGCTGAATGCACGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
............................................................GGTGAATATAT-TTCA-A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1620.50100000000100000000
droSec2
ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTCA-AACTAGTCATAAGT-------TCTTGG-ATTAAGCATAGTTTAGCATAAGGCAGG-------------------TTGTGGTTCTC------------------------------------------------------------------------------------AGAATTCTCTAATT---CAAAAAGGAAAAT-TCCTTTTTT-------------------TTTGTATCTTTCACATTGAAAGTATTCGTATTCAAAAC--------------------------------------------------------------------------------------------------------------------------------------------TTTGAT---GGGATGAGG-------------------------AAATATGCCCAAATTTATTT---------------------------------------------------------------------------------------------------------------------------------------GTTGAATGATTCAAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................CAA----TTAATTGCAGCTGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
dm3
ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTCA-AACTAGTCATAAGT-------TCTTGG-ATTAAGCATAGTTTAACATAAGGCAGG-------------TACATGTTGTGGTTCTC------------------------------------------------------------------------------------AGAATTTTCTAATG---CAGAAAGGGAAAT-TTCTTTT---------------------TTTGTATCTTTCACATTGAAAGTATCCGTATTGAT---------------------------------------------------------------------------------------------------------------------------------------------------AT---GTGACGAGG-------------------------AAATATGACTCAATTTATTTCAACATCTTT------------------------------------------------GTT-AACATTTAT-----------------------------------------------------------TCCCCGTTGAATGATTCAAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............ACTCAA----TTAATTGCAGCTGAATGCACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................ACGACTCCTTGCAGAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---GTGACGAGG-------------------------AAATATGACT................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010
................................................................................................................................................................................................................................................................................................................................................TGAT---------------------------------------------------------------------------------------------------------------------------------------------------AT---GTGACGAGG-------------------------AAATATGAC.................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
....................................................................................CATAAGT-------TCTTGG-ATTAAGCAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ATGCACGACTCCTTGCAGAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................G---CAGAAAGGGAAAT-TTCTTTT---------------------TTTGTATC...............................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
..............CACTCAA----TTAATTGCAGCTGAATGCACGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................CAGG-------------TACATGTTGTGGTTCTC------------------------------------------------------------------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................ATTGAT---------------------------------------------------------------------------------------------------------------------------------------------------AT---GTGACGAGG-------------------------AAAT......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................TTGAT---------------------------------------------------------------------------------------------------------------------------------------------------AT---GTGACGAGG-------------------------AAATATGAC.................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................AATTGCAGCTGAATGCACGACTCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................AAGGCAGG-------------TACATGTTGTGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................TCCTTGCAGAAAGGTGAATATAT-T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AATGCACGACTCCTTGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AGTTTAACATAAGGCAGG-------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
....................A----TTAATTGCAGCTGAATGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................ATTGAT---------------------------------------------------------------------------------------------------------------------------------------------------AT---GTGACGAGG-------------------------AAATATGA..................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..............................................................................................................................................................TCTC------------------------------------------------------------------------------------AGAATTTTCTAATG---CAGAAAGGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TATCCGTATTGAT---------------------------------------------------------------------------------------------------------------------------------------------------AT---GTGACG......................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................ATTGAT---------------------------------------------------------------------------------------------------------------------------------------------------AT---GTGACGAGG-------------------------AAATA.....................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................TTTT---------------------TTTGTATCTTTCACATT......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TATTGAT---------------------------------------------------------------------------------------------------------------------------------------------------AT---GTGACGAGG-------------------------AAATATGAC.................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CACATTGAAAGTATCCGTATTGAT---------------------------------------------------------------------------------------------------------------------------------------------------.................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TAATG---CAGAAAGGGAAAT-TTC................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................AATG---CAGAAAGGGAAAT-T..................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.............................TTGCAGCTGAATGCACGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...................AA----TTAATTGCAGCTGAATGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTAT-----------------------------------------------------------TCCCCGTTGAATGAT.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---GTGACGAGG-------------------------AAATATGACTT...............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................AAGGCAGG-------------TACATGTTGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........CCCACACTCAA----TTAATTGCAGCTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CATTGAAAGTATCCGTATTGAT---------------------------------------------------------------------------------------------------------------------------------------------------A................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CTTGG-ATTAAGCATAGTTTAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
................................................................................................................................................................................................................................................................AATG---CAGAAAGGGAAAT-G..................................................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
droEre2
ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTCA-AACTAGTCATAAGA-------TCTTGG-ATTAAGCTTAGTTTAGCATAAGGCAGG-------------TGCAAGTTGTGCTACT-CTGC----------------------------------------------------------------------------AGTCAGAATTCTCTAATG---CAGAACGGGAAGT-TACCGTT-TGCTTGGTTATCTGCAGAAATTTGTATCTTTCACATTGCAAGTATTCGTATTTAT-GC--------------------------------------------------------------------------------------------------------------------------------------------TTT---------ATGAGG-------------------------AAATACGCCAAAATC------------TTA------------------------------------------------CTTAAACGTCTAC-----------------------------------------------------------TCCTTGTTGAATGATTCAAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................AATG---CAGAACGGGAAGT-TACCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
.................................................................................................................................................................................................................................................................ATG---CAGAACGGGAAGT-TACCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
..............................TGCAGCTGAATGCACGACTCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
..............................TGCAGCTGAATGCACGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
...........................................ACGACTCCTTGCAGAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000010
droYak3
ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTCA-AACTAGTCATAAGA-------TCTTGG-ATTAAGCTTAGTTTAGCATAAGGCAGG-------------TACAAGTTGTGCTTCT-CTGCT----------------------------------------------------------------------------GTCAGAATTCTTAAATT---CAGAA----------------------------------------GTATCTA----AATCAATGTATCCAGTTTCA-ATCTTTGAATC-----------------------------------------------------------------------------------------------------------------------------------------------AAAGGGG-------------------------AAATATGCCTAAATTTATTG--GC-TTTTT------------------------------------------------ATTAAAGTTTTAT-----------------------------------------------------------TCCTTGTTGAATGATTCAAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................TTGCAGCTGAATGCACGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
..................................GCTGAATGCACGACTCCTTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..........................................................................................A-------TCTTGG-ATTAAGCTTAGTTTAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..A-------CCCACACTCAA----TTAATTGCAGCTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
............................ATTGCAGCTGAATGCACGACTCCTTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
...........................................................................................................................................................................................................................................................TCTTAAATT---CAGAA----------------------------------------GTATCTA----.........................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
droEug1
ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTCAAAACTAGTCATAAGA-------CCTTGG-ATTAAGCATAGTTTAGCATAAGGCAGGGACTGTCCTTGGGTACGACTTGTGGTTCT-CTACGTGTTCAAAAACGGACTTTAGAAAAGAAAACTTTGAAATTTTAAACAATT---------------------------TTCAT-ATTC----------------------------------------------------------------------------TACAGTTATA-GTCTTTGAAATACAGATGGAATATTCAGTAA---------------------------------------------------------------------------------------------------------------CTT----------------T-------------------------AATA----------TTTTG--GG-TTTTT------------------------------------------------ATAAAAGTTATATAATAATTTTTTCTATTTATTGGACTTCTTTATTTATACTTTAATTTTTATTGCAATTTCTCC-TG--------------SizeHit CountTotal NormTotal
No Reads
droBia1
ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAAAAAGGTGAATATAT-TTCA-AACTAGTCATAAGA-------TCTTGG-ATTAAGCATAGCTTAGCATAAGGCAGGA-GCG--------TACAATTTGGGGTTCCC------------------------------------------------------------------------------------CCACTTCTCTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTCA-AACTAGTCATAAGA-------TCTTGG-ATTAAGCATAGTTTAGCATAAGGTAGGGAGTGTCCATCGGT------TTGGGTTCT-CTACTTTTTGA-AGATTTA-----------------------------------A------------------------------AGT--------------------------------------------------------------------------------------------CTTTTAAATACAGAAGAAATATTCTAAAACTTGAACTTTTTTTTATCTTCTTTT-------------------------------------------------------------CTT-CAAAGCAAAG-TATAAAAAAACTTTCAA---AAAGTAATA-------------------------AAATATG----------TTG---------------------------------------------------------------------------------------------------------------------------------------GTTGACTCATTAAAASizeHit CountTotal NormTotal
No Reads
droEle1
ATA-------CCCACACTCAA----TTAATTGCAGCCGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTCA-AACTAGTCATAAGA-------TCTCGG-CTTAAGCATAGTTTAGCATAAGGCAGGGACTATCCAGGGGT---------ACTTCT-CTACTTTTTGAAAGATTTA-----------------------------------T-------------------------AGTCAGAATTCCCCAGTTCTACATAACAGAAAATATTATTTTTT-------------------TATTTATCTTTCGCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTCA-AACTAGTCATAAGA-------TTTCGG-CTTAAGCTTAGTTTAGCATAAG-TAGGGACTGTCCAGGGGTAAAAAATGTGGTTCT-CTACTTTTTGAAAGATTTA-----------------------------------C-----------------------ACAGCCAGAATTCGCCAATTCTACAGAACAGGATA---CATTTTTT-------------------GGACTATTTTTCGCTT----------------------------------------------------------------------TTTTTAATGGATTTTATACTGCAGACTGACTTCTATAGC--------TTACAACTCAAAAATAAAACTT-CAAAATACAT-TAGGCAAAAGCTT----------------A-------------------------AATA----------GTTGG--GA-TTTTTTCGGTTTGAGCCCAAGAATATGAAGAATATTTTTTTAAGCTCGTGTGG---A------------------------------------------------------------------------AATTAAAGGCTTAAAASizeHit CountTotal NormTotal
No Reads
droFic1
ATA-------CCCACACTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAAAAAGGTGAATATAT-TTCA-AACTAGTCATAAGA-------TCTCGG-TTTAAGCATAGTTTAGCATAAGATAGGGTCTGC-CAAGGGTTCAAGATGT-------------------------A-----------------------------------AAGTCTAGAGCTCCGTTAAAATAAACAGCCAACATTTCTAAAT----------------------------------------------------------------------------------------------------------------GTCGAAC-------------------------------------------TTCTATGGTCAAAAAGCT--------------------------------------AAAAAGTTACAAACTAAAACAAAAAAATATTTCAACTTATTATTTAGGAAAATATGTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GTA-------G-----CTCAA----TTAATTGCAGCTGAATGCACGACTCCTTGCAAAAAGGTGAATATAT-TTCA-AACTAGTCATAAGAATTAAGGTTTAAG-ACTAGGCTTAGTTTAAGAAATGTCAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBip1
CCA------CCCCACACTCAA----ATAATTGCAGCTGAATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTAA-AACTAGTCCTAAGA-------T--TGGTATTAAGATTAGCTTAGCATAAGGCAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
ATA-------GCCACACTCAAA---TTAATTGCAGCTGTATGCACGACTCCTTGCAAAAAGGTGAATATAT-CTAAAAACTAGATGTAAGA-------TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................TTAATTGCAGCTGTATGCACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
ATA-------GCCACACTCAAA---TTAATTGCAGCTGTATGCACGACTCCTTGCAAAAAGGTGAATATAT-CTAAAAACTAGATTTAAGA-------TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................AA---TTAATTGCAGCTGTATGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
droWil2
ATATAATCTATCCACACTCAAATTAATAATTGCAGCTGTATGCACGACTCCTTGCAGAAAGGTGAATATTAATTTA-AACTAGAAATAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................AATTAATAATTGCAGCTGTATGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
droVir3
AGC-------CCCGCACTCAA----TTAATTGCAGCTGTATGCACGACTCCTTGCAGAAAGGTGAATATAT-TTA---TGTGAACATAAAA-------TATGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATACTAAGTATATGTAAGCATAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................GTATGCACGACTCCTTGCAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAAGTATATGTAAGCATAA.......................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
.................................AGCTGTATGCACGACTCCTTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000010000000000000000000000000000000000000000000
.............................................GACTCCTTGCAGAAAGGTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
ATTG-----CCCCGCACTCAA----TTAATTGCAGCTGTATGCACGACTCCTTGCAGAAAGGTGAATATAT-TAA--ATGTGAACATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCATATGTAAAACATACTAAGTATATGTTAGCATAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AGC-------CCCGCACTCAA----TTAATTGCAGCTGTATGCACGACTCCTTGCAGAAAGGTGAATATAT-CTAT-ATATGTACATACAT-------ACATAC-AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAAGTATATGTAAGCATAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................AA----TTAATTGCAGCTGTATGCACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110

Generated: 05/18/2015 at 06:45 PM