ID:

dsi_24866

 Coordinate:

3l:11465953-11466102 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-15.4 -15.2 -15.1

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. 3l:11465589-11465609 -
  2. dsi_24666  3l:11465793-11465813 -
  3. dsi_24866  3l:11465997-11466017 -
  4. dsi_24866  3l:11466082-11466102 -
  5. node_65520:88-108 -
star
  1. 3l:11465589-11465609 -
  2. dsi_24666  3l:11465793-11465813 -
  3. dsi_24866  3l:11465997-11466017 -
  4. dsi_24866  3l:11466082-11466102 -
  5. node_65520:88-108 -

Sense Strand Reads

AGAATCTCAACCAGATAGTTCGACCCAAGAAATTAGCTCAAGCACGGAAGGTCCTTTGACTACTGAATCATCTACAGAACCTTCTAATGAGTCTTCCTCTACAGAATCTTTGTCAGCNNNGCTCAAGCACTGAAGGTCCTTTGACTACTGAATCATCTACAGAACCTTCTAATGAGTCTTCCTCAACAGAATCTTCACAAGATAGTACGACTCAAGAAAGTAGCTCTAGCACTGAAGGTCCTTTGTCTAC
**************************************************.............(((.(((....((((((((((...(((((....((..(((((...))))).))....)))))......))))))..)))).....))).))).********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M053
female body
 SRR902009
testis
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 O002
Head
 SRR1275487
Male larvae		 SRR553488
RT_0-2 hours eggs
..............................................................................................................................................................................................................................GTTCTAGCATTCAAGGTCC......... 19 3 16 36.69 587 350 209 12 0 10 0 0 0 0 3 2 1 0
................................................................................................................................................................................................CTTCACAAGATAGTACGACT...................................... 20 0 4 6.00 24 24 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCACAAGATAGTACGACT...................................... 18 0 4 4.25 17 16 0 0 0 1 0 0 0 0 0 0 0 0
......................................CAAGCACGGAAGGTCCTTTGACTACT.......................................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCAAGAAAGTAGCTCTAGCACTGAAG............. 26 0 4 1.75 7 7 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GTCCTTTGACTACTGAATCAT.............................................................................................. 21 0 5 1.20 6 6 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTCCTTTGACTACTGAATCAT................................................................................................................................................................................... 21 0 5 1.20 6 6 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................AACAGAATCTTCACAAGATAGTACGACT...................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................CCCAAGAAATTAGCTCAAGCACGGAAG........................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CAAGAAAGTAGCTCTAGCACT................. 21 0 7 1.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0
......................ACCCAAGAAAGTAGCTCAAGCATGGAAA........................................................................................................................................................................................................ 28 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................GCACGGAAGGTCCTTTGACTACTG......................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................ACTCAAGAAAGTAGCTCTAGCACTGAAG............. 28 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCACAAGATAGTACGACTCAAGAAAGT............................. 27 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTCACAAGATAGTACGACT...................................... 19 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CTCAAGAAAGTAGCTCTAGC.................... 20 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0 0
....................................................CCTTTGACTACTGAATCATCTACAG............................................................................................................................................................................. 25 0 5 0.60 3 3 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GATAGTACGACTCAAGAAAGTAGCT......................... 25 0 5 0.60 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CCTTTGACTACTGAATCATC............................................................................................. 20 0 5 0.60 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................CTTTGACTACTGAATCATCTACAGAACCT........................................................................................................................................................................ 29 0 5 0.60 3 3 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................CTTTGACTACTGAATCATCTACAGAACCT................................................................................... 29 0 5 0.60 3 3 0 0 0 0 0 0 0 0 0 0 0 0
....................................................CCTTTGACTACTGAATCATC.................................................................................................................................................................................. 20 0 5 0.60 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CCTTTGACTACTGAATCATCTACAG........................................................................................ 25 0 5 0.60 3 3 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................ACTGAAGGTCCTTTGACTACTGAATCAT.............................................................................................. 28 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CTTCACAAGATAGTACGACTCAAG.................................. 24 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GACTCAAGAAAGTAGCTCTAGCACT................. 25 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CTCAAGAAAGTAGCTCTAGCACT................. 23 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................ACAGAATCTTCACAAGATAGTACGACTC..................................... 28 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GTAGCTCTAGCACTGAAG............. 18 0 7 0.43 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CCTTTGACTACTGAATCATCTACAGA....................................................................................... 26 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GTCCTTTGACTACTGAATCATC............................................................................................. 22 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0
....................................................CCTTTGACTACTGAATCATCTACAGA............................................................................................................................................................................ 26 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTCCTTTGACTACTGAAT...................................................................................................................................................................................... 18 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CCTTTGACTACTGAATCAT.............................................................................................. 19 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ATAGTACGACTCAAGAAAGTAGCT......................... 24 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GATAGTACGACTCAAGAAAGT............................. 21 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GTCCTTTGACTACTGAAT................................................................................................. 18 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTCCTTTGACTACTGAATCATC.................................................................................................................................................................................. 22 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GTCCTTTGACTACTGAATC................................................................................................ 19 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0
....................................................CCTTTGACTACTGAATCAT................................................................................................................................................................................... 19 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AGTACGACTCAAGAAAGT............................. 18 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTCCTTTGACTACTGAATC..................................................................................................................................................................................... 19 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TCAAGCACTGAAGGTCCTTT............................................................................................................ 20 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................CAAGCACTGAAGGTCCTTTGAC......................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................AAGCACTGAAGGTCCTTTGACTACTGAAT................................................................................................. 29 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CAAGCACTGAAGGTCCTTTGACTACT..................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CAAGCACTGAAGGTCCTTTGACG........................................................................................................ 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CAAGAAAGTAGCTCTAGC.................... 18 0 7 0.29 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGTAGCTCTAGCACTGAAG............. 20 0 7 0.29 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GAAAGTAGCTCTAGCACT................. 18 0 7 0.29 2 2 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CAAGAAAGTAGCTCTAGCACTGAAG............. 25 0 7 0.29 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................AGTAGCTCTAGCACTGAAG............. 19 0 7 0.29 2 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................TAATGAGTCTTCCTCTACAGAATC.............................................................................................................................................. 24 0 7 0.29 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AAGAAAGTAGCTCTAGCACTGAAGGTCC......... 28 0 7 0.29 2 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GCACTGAAGGTCCTTTGACTACTGAATC................................................................................................ 28 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TCTTCACAAGATAGTACGACTCAAGA................................. 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................AAGAAAGTAGCTCAAGCACG............................................................................................................................................................................................................ 20 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................ACTCAAGAAAGTAGCTCTAGCACTG................ 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GACTCAAGAAAGTAGCTCTAGCACTGAAG............. 29 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AAGATAGTACGACTCAAGAAAGC............................. 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................CACTGAAGGTCCTTTGACT........................................................................................................ 19 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AGTACGACTCAAGAAAGTAGCTCTAGC.................... 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................CACTGAAGGTCCTTTGACTACTGAATC................................................................................................ 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GCACTGAAGGTCCTTTGACTACT..................................................................................................... 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TGAAGGTCCTTTGACTACTGAATCATC............................................................................................. 27 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................CACTGAAGGTCCTTTGACG........................................................................................................ 19 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CTCAAGAAAGTAGCTCTAGCACTGAAG............. 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CTCAAGAAAGTAGCTCTAGCACTGAA.............. 26 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TAGTACGACTCAAGAAAGTAGCTCT....................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................AGCACTGAAGGTCCTTTGACTACT..................................................................................................... 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................AGCACTGAAGGTCCTTTGACTACTG.................................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................CAGAATCTTCACAAGATAGTACGACT...................................... 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CTCAAGAAAGTAGCTCTAGCAC.................. 22 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CAAGATAGTACGACTCAAGAA................................ 21 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GCACTGAAGGTCCTTTGACTACTGAAT................................................................................................. 27 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GACTCAAGAAAGTAGCTCTAGCACC................. 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CTGAAGGTCCTTTGACTACTGAATCATC............................................................................................. 28 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GCTCAAGCACTGAAGA.................................................................................................................. 16 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TAGTACGACTCAAGAAAGTAGCTCTA...................... 26 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................GATAGTACGACTCAAGAAAGAAGCTCT....................... 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................AATCTTCACAAGATAGTACGACT...................................... 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................CACAAGATAGTACGACTCAAGA................................. 22 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................ATCTTCACAAGATAGTACGACTC..................................... 23 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GCTCTAGCATTCAAGGTC.......... 18 2 9 0.22 2 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................CCTTTGACTACTGAATCATCT................................................................................................................................................................................. 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TGACTACTGAATCATCTACAGAAC..................................................................................... 24 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................CTTTGACTACTGAATCATCTACAGA....................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GATAGTACGACTCAAGAAAA.............................. 20 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................GTCCTTTGACTACTGAATCATCTACAG............................................................................................................................................................................. 27 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ATAGTACGACTCAAGAAAGT............................. 20 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................CTTTGACTACTGAATCATCTACAGA............................................................................................................................................................................ 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GTACGACTCAAGAAAGTAGCT......................... 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGATAGTACGACTCAAGAA................................ 19 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGATAGTACGACTCAAGAAAGT............................. 22 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ACGACTCAAGAAAGTAGCT......................... 19 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GATAGTACGACTCAAGAAAG.............................. 20 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................TGACTACTGAATCATCTACAGAACCT........................................................................................................................................................................ 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CCTTTGACTACTGAATCATCT............................................................................................ 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TCCTTTGACTACTGAATCATCTACA.............................................................................................................................................................................. 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TCCTTTGACTACTGAATCATCTACA......................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AGTACGACTCAAGAAAGTAGCC......................... 22 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGATAGTACGACTCAAGAAAGTAGCT......................... 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................CTTTGACTACTGAATCAT.............................................................................................. 18 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................CTTTGACTACTGAATCAT................................................................................................................................................................................... 18 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GTCCTTTGACTACTGAATCATCTACAG........................................................................................ 27 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................TGACTACTGAATCATCTACAGAAC.......................................................................................................................................................................... 24 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TGACTACTGAATCATCTACAGAACCT................................................................................... 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................ATCATCTACAGAACCTTCTAATGAGTCT....................................................................... 28 0 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GTAGCTCTAGCACTGAAGGTCCTTTGT.... 27 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................ATCATCTACAGAACCTTCTAATGAGTCT............................................................................................................................................................ 28 0 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GTAGCTCTAGCACTGAAGGTCCTTTGTC... 28 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................ATCTACAGAACCTGCTAATGAATCTTCCT........................................................................................................................................................ 29 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................CTACAGAACCTTCTAATGAGT.............................................................................................................................................................. 21 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GCTCTAGCATTCAAGGTCC......... 19 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CTACAGAACCTTCTAATGA........................................................................... 19 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................ATGAATCTTCCTCTACAGA................................................................................................................................................. 19 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................AATGAGTCTTCCTCTACAGAATCT............................................................................................................................................. 24 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................ATCTACAGAACCTTCTAATGAGT......................................................................... 23 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................ATCTACAGAACCTTCTAATGAGT.............................................................................................................................................................. 23 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................ACAGAACCTTCTAATGAGT......................................................................... 19 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................CTACAGAACCTTCTAATGA................................................................................................................................................................ 19 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................ATCTACAGAACCTGCTAATGAATCTTCCT................................................................... 29 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AAGAAAGTAGCTCTAGCACT................. 20 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................AATGAGTCTTCCTCTACAGAATCTT............................................................................................................................................ 25 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................GTCTTCCTCTACAGAATCT............................................................................................................................................. 19 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CAAGAAAGTAGCTCTAGCACTGAAGGTC.......... 28 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CAAGAAAGTAGCTCTAGCACTGACG............. 25 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................ACAGAACCTTCTAATGAGT.............................................................................................................................................................. 19 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CTACAGAACCTTCTAATGAGT......................................................................... 21 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................CTACTGAATCATCTACAGAACCTT.................................................................................. 24 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TGAATCATCTACAGAACCTTCTAA.............................................................................. 24 0 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................TGAATCATCTACAGAACCTTCTAA................................................................................................................................................................... 24 0 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................CTACTGAATCATCTACAGAACCTT....................................................................................................................................................................... 24 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GTTCTAGCACTCAAGGTC.......... 18 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................CTACTGAATCATCTACAGG............................................................................................................................................................................ 19 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CTACTGAATCATCTACAG............................................................................................................................................................................. 18 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................CTACTGAATCATCTACAGA....................................................................................... 19 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................CTACTGAATCATCTACAGG....................................................................................... 19 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................CTACTGAATCATCTACAG........................................................................................ 18 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CTGAATGAACTTTGACTACT..................................................................................................... 20 3 18 0.11 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CGCTCTAGCATTCAAGGTCC......... 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CTACTGAATCATCTACAGA............................................................................................................................................................................ 19 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CTACTGAATCATCTGCAGA............................................................................................................................................................................ 19 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................CTACTGAATCATCTGCAGA....................................................................................... 19 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TCTAGCATTCAAGGTCC......... 17 2 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GATCTAGCATTCAAGGTCC......... 19 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................ACACGTAACGTCCTTTGAC.............................................................................................................................................................................................. 19 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GTTCTAGCATTAAAGGTCC......... 19 3 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......TCAACCTGATAGTTTGA................................................................................................................................................................................................................................... 17 2 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1
................................................................................................................................................................................................................GACGCAAGAAGGTAGCT......................... 17 2 17 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CTCTAGCATTCAAGGTCCC........ 19 3 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GTCTAGCATTCAAGGTCC......... 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TCTTAGAGTTGGTCTATCAAGCTGGGTTCTTTAATCGAGTTCGTGCCTTCCAGGAAACTGATGACTTAGTAGATGTCTTGGAAGATTACTCAGAAGGAGATGTCTTAGAAACAGTCGNNNCGAGTTCGTGACTTCCAGGAAACTGATGACTTAGTAGATGTCTTGGAAGATTACTCAGAAGGAGTTGTCTTAGAAGTGTTCTATCATGCTGAGTTCTTTCATCGAGATCGTGACTTCCAGGAAACAGATG
**********************************************************************************************.............(((.(((....((((((((((...(((((....((..(((((...))))).))....)))))......))))))..)))).....))).))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 M023
head
 SRR902009
testis
 M024
male body		 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 M053
female body
..........................................................................................................................AGTTCAGGACTTCTAGGAAACT.......................................................................................................... 22 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................................TTCCAGGAAACTGATGACTTAGTAGA................................................................................................................................................................................. 26 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTCCAGGAAACTGATGACTTAGTAGA............................................................................................ 26 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................CCGAAGACTTTGTAGATGTC............................................................................................................................................................................. 20 3 16 0.19 3 0 0 0 0 2 0 1 0 0 0 0 0
..............................................................................................................................................CCGAAGACTTTGTAGATGTC........................................................................................ 20 3 16 0.19 3 0 0 0 0 2 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................CGAGATCGTGACTACCAGGAAACAGA.. 26 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GTACCATCATGCCGAGTTCT................................. 20 3 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................GAGTTGTCTTAGAAGA..................................................... 16 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ATGACTTAGTAGATGTCTTGGAAGAT............................................................................... 26 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................ATGACTTAGTAGATGTCTTGGAAGAT.................................................................................................................................................................... 26 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................ATTCCTTAGAAGGAGATG.................................................................................................................................................... 18 2 9 0.11 1 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................TGACTTAGTAGATGTCTCGGACGATT.............................................................................. 26 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................TGACTTAGTAGATGTCTCGGACGATT................................................................................................................................................................... 26 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TTAGTAGATGCCTTGG.................................................................................... 16 1 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................TTAGTAGATGCCTTGG......................................................................................................................................................................... 16 1 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................ATCGAGATGGTGACT............... 15 1 12 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................................................................ATCGACGTCGTGACTTCC............ 18 2 12 0.08 1 0 0 0 0 0 0 1 0 0 0 0 0
...................AGCTTGGTTCTTTGATC...................................................................................................................................................................................................................... 17 2 13 0.08 1 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................................................................................................................AATCGACGTCGTGACTTCC............ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
.......................................................................................ACGCAGAAGGAGATGTAAT................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................AAGATTACTAGGAAGGCGT................................................................. 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0

Generated: 04/24/2015 at 09:24 AM