ID:

dsi_24640

 Coordinate:

2r:13140748-13140897 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [2r_13140645_13140747_+]; exon [2r_13140573_13140747_+]; intron [2r_13140748_13142748_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CGGCGATGGCGATCCGTTCAACTACCAGGAGCTCAACATCATCGGCGAAGGTGAGCATTTGATAATGGGAATGTGGATGCTTTGTTGTTGGGATAGGTCGGCTCTCTTCACACGGTTGGCTTCGTTCGCTGGCCGCTTGTTGTTAACGTTTGATAACTTTAATTTGCTTACAAAGTTTACTTTTATTTACGATCAATCGGGGGTTCCGACATTGTTATGAAGCTGAAATGACAAGTGCACTTGGCCGAAT
**************************************************(((((((.((((....((((..((.(((...(((((.....)))))))).))..))))....((((((((.......))))))))...((((((((...)))))))).))))..)))))))..................(((....))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 M053
female body
 O001
Testis
 SRR902008
ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
..................CAACTACCAGGAGCTCAACAT................................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TCCGACATTGTTATGAAGCTG......................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.................TCAACTACCAGGAGCTC........................................................................................................................................................................................................................ 17 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................AGCTCAACATCATCGGCGAAG........................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................ACCAGGAGCTCAACATCATCGGCGAAGG....................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
................................TCAACATCATCGGCGAAGGTGCCTA................................................................................................................................................................................................. 25 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................ACGCTGAACTGACAAATGCAC.......... 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
.................TCAACTACCAGGAGCTCAACA.................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................GTTCCGACATTGTTATGAAGCTGAAA...................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................CAGGAGCTCAACATCATCGGTGAAGGTGCC................................................................................................................................................................................................... 30 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................GGTTCCGACATTGTTATGAAGCTG......................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................CTACCAGGAGCTCAACATCATCGGC............................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................TGTTGTTGGGAGAGGTTGCCT................................................................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................TACCAGGAGCTCAACATCATCGGCGAA......................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................................GTTACGACATCGTTAAGAAG............................ 20 3 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0 0
.......................................CATCGGCGTAGGTGA.................................................................................................................................................................................................... 15 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................................................................................................GTGCACTTGGCGGAA. 15 1 18 0.22 4 0 0 2 0 0 2 0 0 0 0 0 0
..........................................................................................................................................................................................................................................GTGCACTTGGACGAA. 15 1 11 0.18 2 0 0 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................AAAGTGCACTTGGACGAA. 18 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0
...........ATCCGATCAACTACCA............................................................................................................................................................................................................................... 16 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AGTGTTATGAAGCTGCA....................... 17 2 17 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................GGCGAAGCTGAGAATTT.............................................................................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................................................................................................................................AACGTTATGAAGCTGAACT..................... 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................GGATATCTCGGCTCTC................................................................................................................................................ 16 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................ACTCTCTTCACACGGG...................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
.................................................................................TTGTTGTCGGGATAGGA........................................................................................................................................................ 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................AACATCCTTGGCGAAGG....................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GCCGCTACCGCTAGGCAAGTTGATGGTCCTCGAGTTGTAGTAGCCGCTTCCACTCGTAAACTATTACCCTTACACCTACGAAACAACAACCCTATCCAGCCGAGAGAAGTGTGCCAACCGAAGCAAGCGACCGGCGAACAACAATTGCAAACTATTGAAATTAAACGAATGTTTCAAATGAAAATAAATGCTAGTTAGCCCCCAAGGCTGTAACAATACTTCGACTTTACTGTTCACGTGAACCGGCTTA
**************************************************(((((((.((((....((((..((.(((...(((((.....)))))))).))..))))....((((((((.......))))))))...((((((((...)))))))).))))..)))))))..................(((....))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M024
male body
........................................................................................................................................................................................................CCCAAGGCTGTAACAATA................................ 18 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................AGAGAATTGTGCGAACCG.................................................................................................................................. 18 2 4 0.25 1 0 0 1 0 0 0 0
...........................................................................................................AGTGTGCCAATCGTAGC.............................................................................................................................. 17 2 5 0.20 1 0 1 0 0 0 0 0
......AGCGCTAGGTAAGTTGAAGGT............................................................................................................................................................................................................................... 21 3 6 0.17 1 0 0 0 1 0 0 0
.............................................................................................................................................................................................................................CGACTTGACTGTTTACGTGT......... 20 3 9 0.11 1 0 0 0 0 1 0 0
.....................GATGGTCCTCTAGTTTTAAT................................................................................................................................................................................................................. 20 3 10 0.10 1 0 1 0 0 0 0 0
..................................................................................................GCTGAGAGAAGTGTGTC....................................................................................................................................... 17 2 15 0.07 1 0 0 0 0 0 1 0
.........................................................................................................................................................................................................CCAAGGCTGTAGCAATCA............................... 18 3 20 0.05 1 0 0 0 0 0 0 1
...........................................................................................................AGTGTTCCAAGCGAAG............................................................................................................................... 16 2 20 0.05 1 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:13140698-13140947 + dsi_24640 CGGCGATGGCGATCCGTTCAACTACCAGGAGCTCAACATCATCGGCGAAGGTGAGCATT------------------------------------TGATAATGGGAA-----------------TGTGG-ATGCTTTGTTGTTGGGATAGGTCGGCTCT-------------------------------------CTTCAC---------ACGGTTGGCT-TCGTTC-----------GC----------------T----GGCCGCTTGTTGTTA-----ACGTTTGATAACTTTAATTTGCTTACAAAGTTT-----------------------------------------------------------------------------AC-------------------------TTTTATTTACGA----TCAATCGGG------------GGTTCCGACATTGTTATGAAGCTGAAA--------------TGA------------------------------------------------------------------------CAAGTGCACTTGGCCGAAT
droSec2 scaffold_1:9966506-9966789 + CGGCGATGGCGATCCGTTCAACTACCAGGAGCTCAACATCATCGGCGAAGGTGAGCAACTT------------------------GGGT---ATTTGATAATGGGAA-----------------TGTGG-ATGCTTTGTTGTTGGGATAGGTCGGCTCT-------------------------------------CTTCAC---------ACGGTCGGCT-TCGTTC-----------GC----------------T----GGCCGCTTGTTGTTA-----GCGTTTGATAACTTTAATTTGCTAACAAAGTCTGGGCTATTTGGTTTCA------C-------------------------TACTGTT---------------------TAC-------------------------TTTTATTTACGA----TCAATCGGG------------GGTTCCGACATTGTTATGAAGCTGAAA--------------TGA------------------------------------------------------------------------CAAGTACACTTGGCCGAAT
dm3 chr2R:12468471-12468748 + CGGCGATGGCGATCCGTTCAACTACCAGGAGCTCAACATCATCGGCGAAGGTGAGCGACTT------------------------GGGTGGGATTTAATAATGGG-A-----------------CGCGG-TTGCTTTGTTGTTGGGATAGGTCCGGCTC------------------------------------TCTTCGC---------ACGAGAGGCTTTCGTTT-----------GC----------------T----GGTCGCTTGTTGTTA-----ACGTTTGATTACTTTAATTTGCTTACAAAGTCTGGGCTATTTGGTTTCA------C-------------------------TACTGTT--------------------------------------------------------TACGA----TCAATCGGG------------AGCTCCGACATTGTTATGAAGCTGAAA--------------TGA------------------------------------------------------------------------CAAGTGCACTTGGAGGAAT
droEre2 scaffold_4845:13392175-13392463 - CGGCGATGGCGATCCGTTCAACTACCAGGAGCTGAACATCATCGGCGAAGGTGAGCGGTTTTCCCAGT------------------------GT----------------------TTTGTGGTAGTGG-ATGC-TTCTTGTTGGGATACGTCGGCTCCG-------------------------------------T-----------------------------------------GC----------------T----GGCGG---CTAGTTA-----ACGATT--TCACTTTAATTTGCTTACAAACCTTGGGCTATTTGGTTTTA------C-------------------------TACTCCT---------------------CAC-------------------------ATTTATTTATGA----CCTATTCGG------------AGTGCCGACCTTATTATGAGGCTAAAA--------------CAA-------TCATGTTAGCTGATTGTTCGTAGCGCATTGACC--------------------------------GAAGCGCACTTGACCGAAC
droYak3 2R:16514749-16515082 - CGGCGACGGCGATCCCTTCAACTACCAGGAGCTGAACATCATCGGCGAAGGTGAGCACTTTTCCCAGTTAGATGGTAGTACTAAGTGGT---ATGTGGTAGTGGTAGTGCTAGTAGTAAGTGGTAGTGG-ATGCTTTGTTGTTGGGATAGGTCGGCGCTTCAAAGGGGGCCTCG-----------------------TC------------------------------------------------------------------------TTCCCA-----ACGATT--TCACTTTAATTAGCCTACAAATTTT--ACTATTTGCTTTTA------C-------------------------TATTGCT---------------------TAC-------------------------TTCTATTTATGA----CCTATTAGG------------AGTCCCGCTTTCACAATGAAGCTGATATACCGCG-CTA-----------AAATGAG-----------TTTGTAGCGCATCTGGC---------------------------------AAGTGCACTTGACCGAAC
droEug1 scf7180000409672:2701318-2701496 - TGGCGATGGAGATCCATGTAATTACCAGGAGCTTAACATCATCGGCACAGGTAAGCGGAT----------------------------------------------C-----------------TGTGG-ATTTTTTGTTGTTGGGATAGGTCGGCGCTACAAAGTGGTTTCTG-----------------------TTTATTTATGA-T----------------------------------TGCCCAACGAAACTGTG--CGG----ATTATTA-----ACGATC--T-ACTTTAATATGTTTACAAACTCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302292:1140951-1141237 - CGGCGACGGAGACATCTTCAACTACCAGGAGCTGAACATCATCGGCACAGGTGAGCGGTTC------------------------G-----------------------------------------GG------GTCTTGTTGGGATAGGTCGGCGCCCCAAGGGGG-----------------------------------------T----------------------------------CGCCCAATGAAACTGC---CGG----ATTAGTAACCCAACGATT--T-AC-------------------------AGCCTGCTCTGG------C------------------------CTATTGCT---------------------TACCCAAGAAGGTGTCTTAACGGGT---TTTTACTTGCGG----CTAATTGAGC--------------------TTCTCAGTAAACCTAATTTATGGAGGCGAAAACCGGTTGCGACCGAC-----------GTTGTAGCGCATTCCCC---------------------------------TGCTGCACTCAGCCAAA-
droTak1 scf7180000415386:332916-333269 + CGGCGATGGAGATCCATTTAATTACCAGGAGCTGAACATCATCGGCACAGGTAAGCGGAT----------------------------------------------------------------TTTGG-A--TTTTGTTGTTGGGATAGGTCGGCGTT-----------TCTG-----------------------TTTATTTATGG-T----------------------------------TGCTCAACGAAACTGTG--CGG----ATTATTA-----ACGATT--T-ACTTTAATTTGTTTACAAACTCTTGGCTATTTGGTTACGGCGCGTTCTTGACTTTACATTTTAAGTAGCTCTATTGCT---------------------TACTTAA---GTCGTATTAACGACTT--TTTTATTGGTGG----CTAATTGAGCTTACAAGCAAATGTATGGTTTTGTTAATAAACTTAATTTATTGGT--------GA----TAAACGAC-----------TTTGTAGCGCATTCTCT---------------------------------GAGTGCACTTGGCCAAA-
droEle1 scf7180000491214:1938865-1939030 - CGGCGATGGAGACCCATTTAATTACCAGGAGCTGAACATCATTGGCACAGGTAAGCGGA---------------------------------------------------------------------------TTTGTTGTTGGGATAGGTCGGCGCTACAAAGTGGTTATTG-----------------------TTTATTTATGG-A----------------------------------TGCTCAACGAAACTTTG--GGG----ATCATTA-----ACAACA--T-AC-TTAATTTGCTTACAAATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000759425:98913-99080 - CGGCGATGGAGACCCATTCAATTACCAGGAGCTGAACATCATCGGCACAGGTAAGCGGA--------------------------------------------------------------------------CTTTGTTGTTGGGATAGGTCGGCGCGACCAAGTGGTTTCTG-----------------------TTCATCTATGGGT----------------------------------TGCTCAACGGAACTG----GGG----ACTATTA-----ACTATT--T-ACTTTAATTTGTTTACAAAACTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453851:661803-661971 + CGGCGACGGAGATCCATTTAATTACCAGGAGCTGAACATCATCGGCACAGGTAAGCGGA--------------------------------------------------------------------------TTTTGTTGTTGGGATAGGTCGGCGCTACAAAGTGGTTTCTG-----------------------TTTATTTATGG-T----------------------------------TGCTCAACGAAACTGTG--CGG----ATTATTA-----ACGATT--T-ACTTAAATTTGTTTACAAACTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302470:856311-856512 + TGGCAGTGGTGATCCGTTTAATTACGAGGAGCTCAACATCATTGGCACAGGTAAGCGGA--------------------------------------------------------------------------TTTTGTTGTTGGGATAGGTCGTTG---CAAGGTGGGTT-------TCTCATAGTTGTGGCTCTGTTTACCTATCG-T----------------TGGCCGGCTGGGTGCTCGTGCTCCGCGGAACTGTGTGGGG----ATTATTA-----AAGATT--TTGTTTTAATTTGTTTACAAACTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13266:14119866-14119952 - CGGATGCGGAGATCCCTTCAGCTACGAGGAGCTCAACATCATTGGAACAGGTAAGCGAA-----------------------------------------------------------------AGCGG-A--TTTTGTTGTTGGGATAGGTCGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396759:2017413-2017665 + CGGATGCGGGGATCCGTTCAGCTACGAGGAGCTCAACATCATTGGAACAGGTAAGCGGA--------------------------------------------------------------------------TTTTGTTGTTGGGATAGGTCGGGGATCGGTTTGGGGTTCGGGGTTTCTCATAGTTG-GGTTCTGTTT--------------------------------------------------------------------------------------------------------------------GGGTATTTGGGTATT------T-------------------------TTTTGTTTACAAACACAAGGTAATTGTATAACTAA---GTAGTTTAAAAGACTTAATTCTAGTTTATTTAAACAAAAAAGGCCTAAA-------------------------AACTAAAA----------------A------------------------------------------------------------------------AAACCTCATTTATTATATT
dp5 3:2028390-2028622 - TGAGGA---------------CTACGAAGAACTCAACATCATTGGAACAGGTACGTAGG-----------------------------------------------------------------AGCTGCT-A-CAGATCGTTGGGATAGGTCGGGTT---AAAGG--------------------------------T---------ATTGTTGTTGGCT-TTACTA-----------GG----------------T----GAGGGTTTGTTGG-------G-TTTTTC------------------TAAGTATTTTCGATATGGTTTCC------CTATGAATACACA------------------------------------TTTT---------------------------------------------------------------------------------------------------------------------ATAAGTTATTAGATCATTC-----------GTTGTGTGCTGTTGACTCAATCGTTTAGCTATTGACA----AACTTTTTTGAAT
droPer2 scaffold_2:2200996-2201228 - TGAGGA---------------CTACGAAGAACTCAACATCATTGGAACAGGTACGTAGG-----------------------------------------------------------------AGCTGCT-A-CAGATCGTTGGGATAGGTCAGGTT---AAAGG--------------------------------T---------ATTGTTGTTGGCT-TTACTA-----------GG----------------T----GAGGGTTTGTTGG-------G-TTTTTC------------------TAAGTATTTTCGATATGGTTTCC------CTATGAATACACA------------------------------------TTTT---------------------------------------------------------------------------------------------------------------------ATAAGTTATTAGATCATTC-----------GTTGTGTGCTGTTGACTCAATCGTTTAGCTATTGACA----AACTTTTTTGAAT
droWil2 scf2_1100000004512:1498290-1498341 + CGGCGATGGCGATCCACACAACTATCAGGAACTCAACATTATAGGCACAGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGGCGATGGCGATCCGTTCAACTACCAGGAGCTCAACATCATCGGCGAAGGTGAGCATT------------------------------------TGATAATGGGAA-----------------TGTGG-ATGCTTTGTTGTTGGGATAGGTCGGCTCT-------------------------------------CTTCAC---------ACGGTTGGCT-TCGTTC-----------GC----------------T----GGCCGCTTGTTGTTA-----ACGTTTGATAACTTTAATTTGCTTACAAAGTTT-----------------------------------------------------------------------------AC-------------------------TTTTATTTACGA----TCAATCGGG------------GGTTCCGACATTGTTATGAAGCTGAAA--------------TGA------------------------------------------------------------------------CAAGTGCACTTGGCCGAATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................CAACTACCAGGAGCTCAACAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACATTGTTATGAAGCTG...............................................................................................................2112.00220000000000000000
.................TCAACTACCAGGAGCTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
.............................AGCTCAACATCATCGGCGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.......................ACCAGGAGCTCAACATCATCGGCGAAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
.................TCAACTACCAGGAGCTCAACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCGACATTGTTATGAAGCTGAAA--------------..............................................................................................2611.00100000000100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCCGACATTGTTATGAAGCTG...............................................................................................................2411.00100100000000000000
.....................CTACCAGGAGCTCAACATCATCGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
......................TACCAGGAGCTCAACATCATCGGCGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
droSec2
CGGCGATGGCGATCCGTTCAACTACCAGGAGCTCAACATCATCGGCGAAGGTGAGCAACTT------------------------GGGT---ATTTGATAATGGGAA-----------------TGTGG-ATGCTTTGTTGTTGGGATAGGTCGGCTCT-------------------------------------CTTCAC---------ACGGTCGGCT-TCGTTC-----------GC----------------T----GGCCGCTTGTTGTTA-----GCGTTTGATAACTTTAATTTGCTAACAAAGTCTGGGCTATTTGGTTTCA------C-------------------------TACTGTT---------------------TAC-------------------------TTTTATTTACGA----TCAATCGGG------------GGTTCCGACATTGTTATGAAGCTGAAA--------------TGA------------------------------------------------------------------------CAAGTACACTTGGCCGAATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................CCAGGAGCTCAACATCATCGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.............................................................................................TTTGATAATGGGAA-----------------TGTGG-AT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
..........................AGGAGCTCAACATCATCGGCGAAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
...........ATCCGTTCAACTACCAGGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
dm3
CGGCGATGGCGATCCGTTCAACTACCAGGAGCTCAACATCATCGGCGAAGGTGAGCGACTT------------------------GGGTGGGATTTAATAATGGG-A-----------------CGCGG-TTGCTTTGTTGTTGGGATAGGTCCGGCTC------------------------------------TCTTCGC---------ACGAGAGGCTTTCGTTT-----------GC----------------T----GGTCGCTTGTTGTTA-----ACGTTTGATTACTTTAATTTGCTTACAAAGTCTGGGCTATTTGGTTTCA------C-------------------------TACTGTT--------------------------------------------------------TACGA----TCAATCGGG------------AGCTCCGACATTGTTATGAAGCTGAAA--------------TGA------------------------------------------------------------------------CAAGTGCACTTGGAGGAATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................AGGAGCTCAACATCATCGGCGAAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................CGTTT-----------GC----------------T----GGTCGCTTGTTGT............................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
..................................................................................................................................................ATAGGTCCGGCTC------------------------------------TCTTCG......................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................GCGG-TTGCTTTGTTGTTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CAACTACCAGGAGCTCAACAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
................................TCAACATCATCGGCGAAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................ACTGTT--------------------------------------------------------TACGA----TCAATCGGG------------.......................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TT-----------GC----------------T----GGTCGCTTGTTGTTA-----A....................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TCAACATCATCGGCGAAGGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................................................................................................................................................................................................................................................................................................................TTACAAAGTCTGGGCTATTTGGTT.......................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGGCGATCCGTTCAACTACCAGGAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............CCGTTCAACTACCAGGAGCTCAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................CGAAGGTGAGCGACTT------------------------GGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................CGAAGGTGAGCGACTT------------------------GGGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................CCAGGAGCTCAACATCATCGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................C----------------T----GGTCGCTTGTTGTTA-----ACGTA................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAA--------------TGA------------------------------------------------------------------------CAAGTGCACT.........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AATTTGCTTACAAAGTCTGGG.................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TTGGTTTCA------C-------------------------TACTGTT--------------------------------------------------------TACG.................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGCGACTT------------------------GGGTGGGATTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TGTT--------------------------------------------------------TACGA----TCAATCGGG------------AGC....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GTCTGGGCTATTTGGTTTCA------..............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
......................TACCAGGAGCTCAACATCATCGGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................C-------------------------TACTGTT--------------------------------------------------------TACGA----TCAATCTT....................................................................................................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TCAACTACCAGGAGCTCAACAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................................................................G-A-----------------CGCGG-TTGCTTTGTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TCTGGGCTATTTGGTTTCA------C-------------------------T...................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ATCCGTTCAACTACCAGGAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGCGACTT------------------------GGGTGGGATTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................G-TTGCTTTGTTGTTGGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GA----TCAATCGGG------------AGCTCCGACATTG..........................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..............................GCTCAACATCATCGGCGAAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................GTGGGATTTAATAATGGG-A-----------------CG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
CGGCGATGGCGATCCGTTCAACTACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TACCAGGAGCTCAACATCATCGGCGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CCGTTCAACTACCAGGAGCTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................GTTTGATTACTTTAATTTGCT..............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......TGGCGATCCGTTCAACTACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................T--------------------------------------------------------TACGA----TCAATCGGG------------AGCTCC.................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCCGACATTGTTATGAAG..................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droEre2
CGGCGATGGCGATCCGTTCAACTACCAGGAGCTGAACATCATCGGCGAAGGTGAGCGGTTTTCCCAGT------------------------GT----------------------TTTGTGGTAGTGG-ATGC-TTCTTGTTGGGATACGTCGGCTCCG-------------------------------------T-----------------------------------------GC----------------T----GGCGG---CTAGTTA-----ACGATT--TCACTTTAATTTGCTTACAAACCTTGGGCTATTTGGTTTTA------C-------------------------TACTCCT---------------------CAC-------------------------ATTTATTTATGA----CCTATTCGG------------AGTGCCGACCTTATTATGAGGCTAAAA--------------CAA-------TCATGTTAGCTGATTGTTCGTAGCGCATTGACC--------------------------------GAAGCGCACTTGACCGAACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................AGTGG-ATGC-TTCTTGTTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
..........................AGGAGCTGAACATCATCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
..............................................................................................................................................TGGGATACGTCGGCTCCG-------------------------------------T-----------------------------------------GC----------------..............................................................................................................................................................................................................................................................................................................................................2111.0010000010
.............CCGTTCAACTACCAGGAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
...................................................................................................................................................................................................................................................................................................CACTTTAATTTGCTTACAAACCTTGGGCT...............................................................................................................................................................................................................................................................................2911.0010100000
droYak3
CGGCGACGGCGATCCCTTCAACTACCAGGAGCTGAACATCATCGGCGAAGGTGAGCACTTTTCCCAGTTAGATGGTAGTACTAAGTGGT---ATGTGGTAGTGGTAGTGCTAGTAGTAAGTGGTAGTGG-ATGCTTTGTTGTTGGGATAGGTCGGCGCTTCAAAGGGGGCCTCG-----------------------TC------------------------------------------------------------------------TTCCCA-----ACGATT--TCACTTTAATTAGCCTACAAATTTT--ACTATTTGCTTTTA------C-------------------------TATTGCT---------------------TAC-------------------------TTCTATTTATGA----CCTATTAGG------------AGTCCCGCTTTCACAATGAAGCTGATATACCGCG-CTA-----------AAATGAG-----------TTTGTAGCGCATCTGGC---------------------------------AAGTGCACTTGACCGAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
TGGCGATGGAGATCCATGTAATTACCAGGAGCTTAACATCATCGGCACAGGTAAGCGGAT----------------------------------------------C-----------------TGTGG-ATTTTTTGTTGTTGGGATAGGTCGGCGCTACAAAGTGGTTTCTG-----------------------TTTATTTATGA-T----------------------------------TGCCCAACGAAACTGTG--CGG----ATTATTA-----ACGATC--T-ACTTTAATATGTTTACAAACTCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CGGCGACGGAGACATCTTCAACTACCAGGAGCTGAACATCATCGGCACAGGTGAGCGGTTC------------------------G-----------------------------------------GG------GTCTTGTTGGGATAGGTCGGCGCCCCAAGGGGG-----------------------------------------T----------------------------------CGCCCAATGAAACTGC---CGG----ATTAGTAACCCAACGATT--T-AC-------------------------AGCCTGCTCTGG------C------------------------CTATTGCT---------------------TACCCAAGAAGGTGTCTTAACGGGT---TTTTACTTGCGG----CTAATTGAGC--------------------TTCTCAGTAAACCTAATTTATGGAGGCGAAAACCGGTTGCGACCGAC-----------GTTGTAGCGCATTCCCC---------------------------------TGCTGCACTCAGCCAAA-SizeHit CountTotal NormTotal
No Reads
droTak1
CGGCGATGGAGATCCATTTAATTACCAGGAGCTGAACATCATCGGCACAGGTAAGCGGAT----------------------------------------------------------------TTTGG-A--TTTTGTTGTTGGGATAGGTCGGCGTT-----------TCTG-----------------------TTTATTTATGG-T----------------------------------TGCTCAACGAAACTGTG--CGG----ATTATTA-----ACGATT--T-ACTTTAATTTGTTTACAAACTCTTGGCTATTTGGTTACGGCGCGTTCTTGACTTTACATTTTAAGTAGCTCTATTGCT---------------------TACTTAA---GTCGTATTAACGACTT--TTTTATTGGTGG----CTAATTGAGCTTACAAGCAAATGTATGGTTTTGTTAATAAACTTAATTTATTGGT--------GA----TAAACGAC-----------TTTGTAGCGCATTCTCT---------------------------------GAGTGCACTTGGCCAAA-SizeHit CountTotal NormTotal
No Reads
droEle1
CGGCGATGGAGACCCATTTAATTACCAGGAGCTGAACATCATTGGCACAGGTAAGCGGA---------------------------------------------------------------------------TTTGTTGTTGGGATAGGTCGGCGCTACAAAGTGGTTATTG-----------------------TTTATTTATGG-A----------------------------------TGCTCAACGAAACTTTG--GGG----ATCATTA-----ACAACA--T-AC-TTAATTTGCTTACAAATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CGGCGATGGAGACCCATTCAATTACCAGGAGCTGAACATCATCGGCACAGGTAAGCGGA--------------------------------------------------------------------------CTTTGTTGTTGGGATAGGTCGGCGCGACCAAGTGGTTTCTG-----------------------TTCATCTATGGGT----------------------------------TGCTCAACGGAACTG----GGG----ACTATTA-----ACTATT--T-ACTTTAATTTGTTTACAAAACTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CGGCGACGGAGATCCATTTAATTACCAGGAGCTGAACATCATCGGCACAGGTAAGCGGA--------------------------------------------------------------------------TTTTGTTGTTGGGATAGGTCGGCGCTACAAAGTGGTTTCTG-----------------------TTTATTTATGG-T----------------------------------TGCTCAACGAAACTGTG--CGG----ATTATTA-----ACGATT--T-ACTTAAATTTGTTTACAAACTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TGGCAGTGGTGATCCGTTTAATTACGAGGAGCTCAACATCATTGGCACAGGTAAGCGGA--------------------------------------------------------------------------TTTTGTTGTTGGGATAGGTCGTTG---CAAGGTGGGTT-------TCTCATAGTTGTGGCTCTGTTTACCTATCG-T----------------TGGCCGGCTGGGTGCTCGTGCTCCGCGGAACTGTGTGGGG----ATTATTA-----AAGATT--TTGTTTTAATTTGTTTACAAACTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
CGGATGCGGAGATCCCTTCAGCTACGAGGAGCTCAACATCATTGGAACAGGTAAGCGAA-----------------------------------------------------------------AGCGG-A--TTTTGTTGTTGGGATAGGTCGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CGGATGCGGGGATCCGTTCAGCTACGAGGAGCTCAACATCATTGGAACAGGTAAGCGGA--------------------------------------------------------------------------TTTTGTTGTTGGGATAGGTCGGGGATCGGTTTGGGGTTCGGGGTTTCTCATAGTTG-GGTTCTGTTT--------------------------------------------------------------------------------------------------------------------GGGTATTTGGGTATT------T-------------------------TTTTGTTTACAAACACAAGGTAATTGTATAACTAA---GTAGTTTAAAAGACTTAATTCTAGTTTATTTAAACAAAAAAGGCCTAAA-------------------------AACTAAAA----------------A------------------------------------------------------------------------AAACCTCATTTATTATATTSizeHit CountTotal NormTotal
No Reads
dp5
TGAGGA---------------CTACGAAGAACTCAACATCATTGGAACAGGTACGTAGG-----------------------------------------------------------------AGCTGCT-A-CAGATCGTTGGGATAGGTCGGGTT---AAAGG--------------------------------T---------ATTGTTGTTGGCT-TTACTA-----------GG----------------T----GAGGGTTTGTTGG-------G-TTTTTC------------------TAAGTATTTTCGATATGGTTTCC------CTATGAATACACA------------------------------------TTTT---------------------------------------------------------------------------------------------------------------------ATAAGTTATTAGATCATTC-----------GTTGTGTGCTGTTGACTCAATCGTTTAGCTATTGACA----AACTTTTTTGAATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TGAGGA---------------CTACGAAGAACTCAACATCATTGGAACAGGTACGTAGG-----------------------------------------------------------------AGCTGCT-A-CAGATCGTTGGGATAGGTCAGGTT---AAAGG--------------------------------T---------ATTGTTGTTGGCT-TTACTA-----------GG----------------T----GAGGGTTTGTTGG-------G-TTTTTC------------------TAAGTATTTTCGATATGGTTTCC------CTATGAATACACA------------------------------------TTTT---------------------------------------------------------------------------------------------------------------------ATAAGTTATTAGATCATTC-----------GTTGTGTGCTGTTGACTCAATCGTTTAGCTATTGACA----AACTTTTTTGAATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..AGGA---------------CTACGAAGAACTCAACATCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
..AGGA---------------CTACGAAGAACTCAACATCATTGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
....GA---------------CTACGAAGAACTCAACATCATTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
droWil2
CGGCGATGGCGATCCACACAACTATCAGGAACTCAACATTATAGGCACAGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads

Generated: 05/19/2015 at 05:29 AM