dsi_24592

CTCTGGGCTGACAATGTTCTTATTTTTGGGTGACATAGGTTTGCCGCCGGGTAAGTATCGAAAGCCCACTGGAGGGATGGCGTTAGGCCATCGACCCTTATAGACGGTTATCGATATATGAGAAGATGACGTGGTAGGCATGCTCTAGTATCCTCTAGAAACGAATGGAGCGTGTCGAGCATGACTCCAAGGTATTTTATCGAGCGTTACAATGTCACTTTGGTGCCCAAAACTTGGATGCTTGCTGCCT *************************************************...(((((((.((((..(((((((((((((.....)))))...))))).)))..)))).)))))))..................*****************************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR618934 dsim w501 ovaries	SRR553485 Chicharo_3 day-old ovaries	SRR902008 ovaries	SRR553487 NRT_0-2 hours eggs	SRR553488 RT_0-2 hours eggs	SRR553486 Makindu_3 day-old ovaries	M025 embryo	M024 male body
............................................................................................................TATCGATATATGAGAAGATGACGTGGT...................................................................................................................	27	0	1	2.00	2	0	0	0	1	1	0	0	0
...................................................TAAGTATCGAAAGCCCACTGG..................................................................................................................................................................................	21	0	1	1.00	1	0	0	0	0	1	0	0	0
...............................................................................................................................................................................................................TACAATGTCACTTTGGTGCCCAAAACT................	27	0	1	1.00	1	0	1	0	0	0	0	0	0
.........................................................................................................................................................TCTAGAAACGAATGGAGCGTGTCGAGCA.....................................................................	28	0	1	1.00	1	0	1	0	0	0	0	0	0
............................................................................................................TATCGATATATGAGAAGATGA.........................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0	0	0
....................TATTTTTGGGTGACATAG....................................................................................................................................................................................................................	18	0	1	1.00	1	1	0	0	0	0	0	0	0
...................................................................................................................ATATGAGAAGATGACGTGGTA..................................................................................................................	21	0	1	1.00	1	0	0	0	1	0	0	0	0
.................................................................................................................................CGTGGTAGGCATGCTCTAGT.....................................................................................................	20	0	1	1.00	1	0	0	1	0	0	0	0	0
.................................................................................................................ATATATGAGAAGATGACGTGG....................................................................................................................	21	0	1	1.00	1	0	0	1	0	0	0	0	0
........................................................................................................................AGAAGATGACGTGGTAGGCAT.............................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0	0	0
.....................................................................................................................................................................................TGACTCCAAGGTATTTTATCGAGCGT...........................................	26	0	1	1.00	1	0	1	0	0	0	0	0	0
................................................................................................................GATATATGAGAAGATGACGTG.....................................................................................................................	21	0	1	1.00	1	0	0	0	0	0	1	0	0
..................................................................................................................TATATGAGAAGATGACGTGGTAGGCA..............................................................................................................	26	0	1	1.00	1	0	0	1	0	0	0	0	0
...............................................................................................................................................................................................................TTCAATGTCGCTTTGGTG.........................	18	2	10	0.30	3	0	0	0	0	0	0	3	0
........................................................................................................................................................................ACCCTGTCGAGCTTGACTCC..............................................................	20	3	4	0.25	1	0	0	0	0	0	0	0	1
..................................................................................................................................................................................GCAGGTCTCCAAGGTA........................................................	16	2	20	0.10	2	0	0	0	2	0	0	0	0
...............................................................................................................................................................................CGCGCGTGACTCCAGGGT.........................................................	18	3	17	0.06	1	1	0	0	0	0	0	0	0
...............................................................................................................................................................................................................AAGAGTGTCACTTTGGTGC........................	19	3	20	0.05	1	1	0	0	0	0	0	0	0

GAGACCCGACTGTTACAAGAATAAAAACCCACTGTATCCAAACGGCGGCCCATTCATAGCTTTCGGGTGACCTCCCTACCGCAATCCGGTAGCTGGGAATATCTGCCAATAGCTATATACTCTTCTACTGCACCATCCGTACGAGATCATAGGAGATCTTTGCTTACCTCGCACAGCTCGTACTGAGGTTCCATAAAATAGCTCGCAATGTTACAGTGAAACCACGGGTTTTGAACCTACGAACGACGGA *****************************************************************************************************************...(((((((.((((..(((((((((((((.....)))))...))))).)))..)))).)))))))..................*************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M025 embryo	SRR553486 Makindu_3 day-old ovaries	SRR618934 dsim w501 ovaries	SRR553485 Chicharo_3 day-old ovaries	SRR553488 RT_0-2 hours eggs	M024 male body	M053 female body	SRR553487 NRT_0-2 hours eggs
.......................................................................................................................................TCCGTACGAGATCATAGGAGA..............................................................................................	21	0	1	3.00	3	3	0	0	0	0	0	0	0
.......................................................................................................................................CCCGTACGAGATCATAGGAGA..............................................................................................	21	1	1	1.00	1	0	0	0	0	0	1	0	0
GAGACCCGACTGTTACAAGAA.....................................................................................................................................................................................................................................	21	0	1	1.00	1	0	0	1	0	0	0	0	0
.............................................................................................................................................................................CAGGTAGTACTGAGGTTCCATA.......................................................	22	2	1	1.00	1	0	0	0	0	0	0	1	0
..............................................................................................................AGCTATATACTCTTCTACTGC.......................................................................................................................	21	0	1	1.00	1	0	0	0	1	0	0	0	0
..GACCCGACTGTTACAAGAATA...................................................................................................................................................................................................................................	21	0	1	1.00	1	0	0	1	0	0	0	0	0
.AGACCCGACTGTTACAAGAAT....................................................................................................................................................................................................................................	21	0	1	1.00	1	0	0	0	1	0	0	0	0
...........................................GGCGGCCCATTCATAGCTT............................................................................................................................................................................................	19	0	1	1.00	1	0	0	0	0	0	0	0	1
............................................................................................................................................................................ACAGCTCGTAATGAGGATCTATAAAAT...................................................	27	3	1	1.00	1	0	0	0	0	1	0	0	0
.........................................................................................................................................................................................AGGTTCCATAAAATAGCTCGCAATGTT......................................	27	0	1	1.00	1	0	1	0	0	0	0	0	0
..............................................................................................................................................................................AGCTCGTACTGAGGTTCCATA.......................................................	21	0	1	1.00	1	0	0	0	0	1	0	0	0
..........................................CGGCGGCCCATTCATAGCTTTCGGGT......................................................................................................................................................................................	26	0	1	1.00	1	0	1	0	0	0	0	0	0
.AGACCCGACTGTTACAAGAATAAA.................................................................................................................................................................................................................................	24	0	1	1.00	1	0	1	0	0	0	0	0	0
.........................................CCGGCGGTCCATTCATA................................................................................................................................................................................................	17	2	7	0.14	1	0	0	1	0	0	0	0	0

Species	Coordinate	ID	Alignment
droSim2	4:626975-627224 -	dsi_24592	CTCTGGGCTGACAATGTTCTTATTTTTGGGTGACATAGGTTTGCCGCCGGGTAAGTATCGAAAGCCCACTGGAGGGATGGCGTTAGGCCATCGACCCTTATAGACGGTTATCGATATATGAGAAGATGACGTGGTAGGCATG--CTCTAGTATCCTCTAGAAA----------------------CGAAT---GGAGCGTGTCGAGCATGACTCCAAGGTATTTTATCGAGCGTTACAATGTCACTTTGGTG------CCCAAAACTTGGATGCTTGCTGCCT
droSec2	scaffold_30:526372-526511 -		CTCTGGGCTGACAAAGTTCCTATTTTTGGGT-------------------------------------------------------------------------------------------------------------GA--CATAGT-ATCCTCTAGAAA----------------------CGAAT---GGAGGTTGTCGAGCATGACTCCAAGGTATTTTATCGAGCATTACAATGTCACTTTGGTG------CCCAGAACTTGGATGCTTGCTGCCT
dm3	chr2R:1209354-1209475 +		G-------------------------------------------------------------------------------------------------------------------------------------TGGGCGTA--CTCGAA-GTGTTCTCTGAA----------------------CGAAA---GGCGCGTGTCGAGAATGACTCCGAGTTCTTTTATCGAGCGTTGCGACGTCACTGTAATGTCAACCAACCCAACCTTGATGCGTGCTGCTT
droEre2	scaffold_4784:23998871-23998972 +		G-------------------------------------------------------------------------------------------------------------------------------------TGGGCGTT--CTCGAG-GTGCTCTCGGTA----------------------CGACA---GGCGCGTGTTGAGCATGACTCCAAGGTATTTGATGGATCGTTTCGACGTCACTGT--------------------GGATTCTTGCTGTCT
droYak3	v2_chrUh_007:104435-104560 +		AAG--------------------------------------------------------------------------------------------------------------------------ATGACGTGATAGGCATGACTTCGCC-GCACTCCTGGCAATTAACACATGGTTGAGGTAGAAGTCTACCTGGCCGTGTCGAGCATGACTGT---------------------------AACTCTGATA------CCCTCAACTTGGCTGCGAGCTG-CT
droBia1	scf7180000299791:181-262 +		G---------------------------------------------------------------------------------------------------------------------------------------------------------------ATA----------------------AGAGA---GACGGGTGTCCAGCATGACTCCCAAGTATCTCATGGCTCGCTGAGATAAAATACTTGTC------CCTCCGATCTGGAT-----------
droTak1	scf7180000414196:11418-11529 +		G-----------------------------------------------------------------------------------------------------------------------------------------CATA--CTCGAG-GTGCTCGCGGAA----------------------CGACA---GGCGTGTGTCTAGCATTACTCCCAGATACTTCAGGGCACGCTGCGACTGAATTGTGGTC------CCACCGACCAGGATCTCCGCCGTCT
droEle1	scf7180000490726:6195-6292 +		C----------------------------------------------------------------------------------------------------------------------------------------------------------TCGCGGTA----------------------CGATA---GACGTGTGTCCAGCATGACTCCAAGATACTTTAGGGCCCGCTAGGTCTGTATTGTCGCC------CCGCCGACATGTATCTGCGCTGATT
droRho1	scf7180000761589:3660-3738 +		G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCCAGCATGACCCCTAGGTATTTTATAGAACTTTTCGTCTTCACTTGGGCT------CCGCCCACAGTGATTCGTGCCGTTT
droKik1	scf7180000300178:6552-6663 +		G-----------------------------------------------------------------------------------------------------------------------------------------CATA--CCCTAG-GTGCTCGCGGAA----------------------GGAAA---GCCTCGTGTCGATCATCACGCCCAGGTATTTTATGGCTCTGGACGATCTGATCGAGGCC------CCGCACACTCGGATGGTTGCGACCT
droAna3	scaffold_13273:7276-7391 +		G-------------------------------------------------------------------------------------------------------------------------------------TGAGCATA--CTTCAG-GTGCTCCCGAAA----------------------TGAGA---GCCTCGTGTCCAGCATCACTCCAATATATTTTATGGCTCTCTTTGATGTGATGGCCACT------CCTCCTACTCGGACCGTCGCCGTTT
droBip1	scf7180000396212:22807-22922 -		G-------------------------------------------------------------------------------------------------------------------------------------TGGGCGTA--CTCAAG-GTGCTCTTGGAA----------------------CGAGA---GCCTTGTATCAAGCCAGACCCCTAGGTATTTTATAGCTCTCCCCGAGGTAACGGCCACT------CCTCCTACGTGAATTGTCGCTGTTT
dp5	XR_group5:68530-68647 -		TGG-----------------------------------------------------------------------------------------------------------------------------------TGTGTCTG--CTGCAG-GTGCTCTCTAAA----------------------CGACA---TTCGGATGTCCAGCATAACTCCCAGGTACCTTATCGCCCGTTTTGAGGTAATTGTGGTT------CCTCCTACAGTTATCCTCGCCGTCT
droPer2	scaffold_166:39310-39427 +		TGG-----------------------------------------------------------------------------------------------------------------------------------TGTGTCTG--CTGCAG-GTGTTCTCTAAA----------------------CGACA---GCCTGGTGTCCAGCATAACTCCCAGGTACCTTATCGCTCGTTTTGAGGTAATTGAGGCT------CCTCATACGGTTATCCTCGCCGTCT
droWil2	scf2_1100000004854:249503-249603 -		G-------------------------------------------------------------------------------------------------------------------------------------------------------TGTTCTCTAAA----------------------AGTCA---GCCTTGTGTCGATCATGACTCCTAGGTATTTTAGAGCTCGCTTAGAGACAACGGTGGTG------TCGCCGACCCTAATGGTGGCGGTCT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

CTCTGGGCTGACAATGTTCTTATTTTTGGGTGACATAGGTTTGCCGCCGGGTAAGTATCGAAAGCCCACTGGAGGGATGGCGTTAGGCCATCGACCCTTATAGACGGTTATCGATATATGAGAAGATGACGTGGTAGGCATG--CTCTAGTATCCTCTAGAAA----------------------CGAAT---GGAGCGTGTCGAGCATGACTCCAAGGTATTTTATCGAGCGTTACAATGTCACTTTGGTG------CCCAAAACTTGGATGCTTGCTGCCT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
............................................................................................................TATCGATATATGAGAAGATGACGTGGT....................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0
...................................................TAAGTATCGAAAGCCCACTGG...................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TACAATGTCACTTTGGTG------CCCAAAACT................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................TCTAGAAA----------------------CGAAT---GGAGCGTGTCGAGCA...........................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
............................................................................................................TATCGATATATGAGAAGATGA..........................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
....................TATTTTTGGGTGACATAG.....................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...................................................................................................................ATATGAGAAGATGACGTGGTA...................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................CGTGGTAGGCATG--CTCTAGT....................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................ATATATGAGAAGATGACGTGG.....................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................AGAAGATGACGTGGTAGGCAT..............................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
................................................................................................................................................................................................................TGACTCCAAGGTATTTTATCGAGCGT.................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
................................................................................................................GATATATGAGAAGATGACGTG......................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................TATATGAGAAGATGACGTGGTAGGCA...............................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0

droSec2

CTCTGGGCTGACAAAGTTCCTATTTTTGGGT-------------------------------------------------------------------------------------------------------------GA--CATAGT-ATCCTCTAGAAA----------------------CGAAT---GGAGGTTGTCGAGCATGACTCCAAGGTATTTTATCGAGCATTACAATGTCACTTTGGTG------CCCAGAACTTGGATGCTTGCTGCCT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
No Reads

dm3

G-------------------------------------------------------------------------------------------------------------------------------------TGGGCGTA--CTCGAA-GTGTTCTCTGAA----------------------CGAAA---GGCGCGTGTCGAGAATGACTCCGAGTTCTTTTATCGAGCGTTGCGACGTCACTGTAATGTCAACCAACCCAACCTTGATGCGTGCTGCTT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.........................................................................................................................................................................................CGAAA---GGCGCGTGTCGAG.............................................................................	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................CCAACCTTGATGCGTGCT....	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TTTTATCGAGCGTTGCGACGTCACTG....................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................AAA---GGCGCGTGTCGAGAATGACTCC....................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................A----------------------CGAAA---GGCGCGTGTCGAGAATGACTC.....................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................CGAGTTCTTTTATCGAGCGTTGCGACG..........................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................TGGGCGTA--CTCGAA-GTGTTCT.............................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................A---GGCGCGTGTCGAGAATGACT......................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................AAA---GGCGCGTGTCGAGGGC..........................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

G-------------------------------------------------------------------------------------------------------------------------------------TGGGCGTT--CTCGAG-GTGCTCTCGGTA----------------------CGACA---GGCGCGTGTTGAGCATGACTCCAAGGTATTTGATGGATCGTTTCGACGTCACTGT--------------------GGATTCTTGCTGTCT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

droYak3

AAG--------------------------------------------------------------------------------------------------------------------------ATGACGTGATAGGCATGACTTCGCC-GCACTCCTGGCAATTAACACATGGTTGAGGTAGAAGTCTACCTGGCCGTGTCGAGCATGACTGT---------------------------AACTCTGATA------CCCTCAACTTGGCTGCGAGCTG-CT

Size

Hit Count

Total Norm

Total

M026
Head

M043
Female-body

M056
Embryo

V046
Embryo

V052
Head

V058
Head

V120
Male-body

SRR1275488
Male larvae

SRR1275486
Male prepupae

SRR1275484
Male prepupae

GSM1528802
follicle cells

No Reads

droBia1

G---------------------------------------------------------------------------------------------------------------------------------------------------------------ATA----------------------AGAGA---GACGGGTGTCCAGCATGACTCCCAAGTATCTCATGGCTCGCTGAGATAAAATACTTGTC------CCTCCGATCTGGAT-----------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

G-----------------------------------------------------------------------------------------------------------------------------------------CATA--CTCGAG-GTGCTCGCGGAA----------------------CGACA---GGCGTGTGTCTAGCATTACTCCCAGATACTTCAGGGCACGCTGCGACTGAATTGTGGTC------CCACCGACCAGGATCTCCGCCGTCT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

C----------------------------------------------------------------------------------------------------------------------------------------------------------TCGCGGTA----------------------CGATA---GACGTGTGTCCAGCATGACTCCAAGATACTTTAGGGCCCGCTAGGTCTGTATTGTCGCC------CCGCCGACATGTATCTGCGCTGATT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCCAGCATGACCCCTAGGTATTTTATAGAACTTTTCGTCTTCACTTGGGCT------CCGCCCACAGTGATTCGTGCCGTTT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

G-----------------------------------------------------------------------------------------------------------------------------------------CATA--CCCTAG-GTGCTCGCGGAA----------------------GGAAA---GCCTCGTGTCGATCATCACGCCCAGGTATTTTATGGCTCTGGACGATCTGATCGAGGCC------CCGCACACTCGGATGGTTGCGACCT	Size	Hit Count	Total Norm	Total
No Reads

droAna3

G-------------------------------------------------------------------------------------------------------------------------------------TGAGCATA--CTTCAG-GTGCTCCCGAAA----------------------TGAGA---GCCTCGTGTCCAGCATCACTCCAATATATTTTATGGCTCTCTTTGATGTGATGGCCACT------CCTCCTACTCGGACCGTCGCCGTTT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
......................................................................................................................................................................................................................................TCTCTTTGATGTGATGGCCACT------CCTCC....................	27	15	0.27	4	2	2	0	0	0	0
........................................................................................................................................................................................................................................TCTTTGATGTGATGGCCACT------CCTCCTA..................	27	15	0.20	3	3	0	0	0	0	0
........................................................................................................................................................................................................................................................CACT------CCTCCTACTCGGACCGTCGCC....	25	20	0.20	4	1	3	0	0	0	0
.........................................................................................................................................................................................TGAGA---GCCTCGTGTCCAGCATCACT......................................................................	25	7	0.14	1	0	0	1	0	0	0
........................................................................................................................................................................................................................................TCTTTGATGTGATGGCCACT------CCTCCTAC.................	28	15	0.13	2	2	0	0	0	0	0
................................................................................................................................................................................................................................TATGGCTCTCTTTGATGTGATGGC...................................	24	16	0.13	2	0	1	1	0	0	0
........................................................................................................................................................................................................................................................CACT------CCTCCTACTCGGACCGTCGCCGTT.	28	18	0.11	2	2	0	0	0	0	0
...........................................................................................................................................................................................................................................................T------CCTCCTACTCGGACCGTCGCCGTT.	25	18	0.11	2	2	0	0	0	0	0
.................................................................................................................................................................................................................................................TGATGGCCACT------CCTCCTACTCGGACC..........	26	20	0.10	2	2	0	0	0	0	0
...............................................................................................................................................................................................................................................TGTGATGGCCACT------CCTCCTACTCGG.............	25	12	0.08	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................TTTGATGTGATGGCCACT------CCTCCTACTC...............	28	15	0.07	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................TCTTTGATGTGATGGCCACT------CCTCC....................	25	15	0.07	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................TGTGATGGCCACT------CCTCCTACTCG..............	24	15	0.07	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................TGATGTGATGGCCACT------CCTCCTAC.................	24	15	0.07	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................ATGTGATGGCCACT------CCTCCTACTCG..............	25	15	0.07	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................TTTGATGTGATGGCCACT------CCTCCTACTCG..............	29	15	0.07	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................TTTATGGCTCTCTTTGATGTGATGGC...................................	26	16	0.06	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................TCTCTTTGATGTGATGGCCACT------CC.......................	24	16	0.06	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................TTATGGCTCTCTTTGATGTGATG.....................................	23	16	0.06	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................TTTTATGGCTCTCTTTGATGTGATGG....................................	26	16	0.06	1	0	1	0	0	0	0
................................................................................................................................................................................................................................TATGGCTCTCTTTGATGTGATGGCC..................................	25	16	0.06	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................TCTCTTTGATGTGATGGCCACT------CCT......................	25	16	0.06	1	0	1	0	0	0	0
......................................................................................................................................................................................................................................................GCCACT------CCTCCTACTCGGACCGTCGCCG...	28	18	0.06	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................ACT------CCTCCTACTCGGACCGTCGCCGTT.	27	18	0.06	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................CACT------CCTCCTACTCGGACCGTCGCCGT..	27	19	0.05	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................CACT------CCTCCTACTCGGACCGTCGCCG...	26	19	0.05	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................TGATGGCCACT------CCTCCTACTCGG.............	23	20	0.05	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................T------CCTCCTACTCGGACCGTCGCCG...	23	20	0.05	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................CCTCCTACTCGGACCGTCGCCGT..	23	20	0.05	1	1	0	0	0	0	0

droBip1

G-------------------------------------------------------------------------------------------------------------------------------------TGGGCGTA--CTCAAG-GTGCTCTTGGAA----------------------CGAGA---GCCTTGTATCAAGCCAGACCCCTAGGTATTTTATAGCTCTCCCCGAGGTAACGGCCACT------CCTCCTACGTGAATTGTCGCTGTTT	Size	Hit Count	Total Norm	Total
No Reads

dp5

TGG-----------------------------------------------------------------------------------------------------------------------------------TGTGTCTG--CTGCAG-GTGCTCTCTAAA----------------------CGACA---TTCGGATGTCCAGCATAACTCCCAGGTACCTTATCGCCCGTTTTGAGGTAATTGTGGTT------CCTCCTACAGTTATCCTCGCCGTCT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
...............................................................................................................................................................TAAA----------------------CGACA---TTCGGATGTCCAGCA...........................................................................	24	1	30.00	30	0	26	0	0	0	0	1	3	0	0
.................................................................................................................................................TGCAG-GTGCTCTCTAAA----------------------CGACA---TTC.......................................................................................	25	1	30.00	30	0	22	1	0	0	0	0	7	0	0
.................................................................................................................................................TGCAG-GTGCTCTCTAAA----------------------CGACA---TTCG......................................................................................	26	1	16.00	16	0	7	0	0	0	0	0	9	0	0
.................................................................................................................................................TGCAG-GTGCTCTCTAAA----------------------CGACA---TTCGGA....................................................................................	28	1	12.00	12	0	11	0	0	0	0	0	1	0	0
...........................................................................................................................................................................................................................TACCTTATCGCCCGTTTTGAGGTAATTG....................................	28	1	11.00	11	0	11	0	0	0	0	0	0	0	0
.................................................................................................................................................TGCAG-GTGCTCTCTAAA----------------------CGACA---TTCGG.....................................................................................	27	1	11.00	11	0	9	0	0	0	0	0	2	0	0
.................................................................................................................................................TGCAG-GTGCTCTCTAAA----------------------CGACA---T.........................................................................................	23	1	8.00	8	0	8	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................TGGTT------CCTCCTACAGTTATCCTCGCCG...	27	1	7.00	7	0	7	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................TACCTTATCGCCCGTTTTGAGGTAA.......................................	25	1	6.00	6	0	3	0	0	0	0	0	3	0	0
.......................................................................................................................................................................................................................................................TGGTT------CCTCCTACAGTTATCCTCGC.....	25	1	5.00	5	0	5	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GGATGTCCAGCATAACTCCCAGGT...............................................................	24	1	5.00	5	0	5	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................GTACCTTATCGCCCGTTTTGAGG..........................................	23	2	4.00	8	0	5	0	0	0	0	0	3	0	0
........................................................................................................................................................TGCTCTCTAAA----------------------CGACA---TTCGGATG..................................................................................	24	1	4.00	4	0	4	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................TGGTT------CCTCCTACAGTTATCCTCGCC....	26	1	4.00	4	0	4	0	0	0	0	0	0	0	0
.................................................................................................................................................TGCAG-GTGCTCTCTAAA----------------------CGACA---TT........................................................................................	24	1	4.00	4	0	4	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TCGGATGTCCAGCATAACTCCCAG.................................................................	24	1	4.00	4	0	4	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................AGGTAATTGTGGTT------CCTCCTAC.................	22	1	4.00	4	0	0	0	0	0	0	0	4	0	0
..................................................................................................................................................GCAG-GTGCTCTCTAAA----------------------CGACA---TTCGG.....................................................................................	26	1	4.00	4	0	4	0	0	0	0	0	0	0	0
.................................................................................................................................................TGCAG-GTGCTCTCTAAA----------------------CGACA---TTCGGAT...................................................................................	29	1	3.00	3	0	3	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TCCAGCATAACTCCCAGGTACCTTAT........................................................	26	5	2.80	14	0	9	0	0	0	0	0	5	0	0
....................................................................................................................................................................................................GGATGTCCAGCATAACTCCCAGG................................................................	23	1	2.00	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GGATGTCCAGCATAACTCCCAGGTA..............................................................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................CTAAA----------------------CGACA---TTCGGATGTCCAGCA...........................................................................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---TTCGGATGTCCAGCATAA........................................................................	27	1	2.00	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................ATGTCCAGCATAACTCCCAGGTACCT...........................................................	26	1	2.00	2	0	0	0	0	0	0	0	2	0	0
..................................................................................................................................................................................................TCGGATGTCCAGCATAACTCCCAGG................................................................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................TACCTTATCGCCCGTTTTGAGGTAAT......................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................TACAGTTATCCTCGCCGTCT	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---TTCGGATGTC................................................................................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................TTCGGATGTCCAGCATAACTCCCAGG................................................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................................................................................TCTCTAAA----------------------CGACA---TTCGGATGTCCAGCA...........................................................................	28	1	2.00	2	0	1	0	0	0	0	0	1	0	0
........................................................................................................................................................TGCTCTCTAAA----------------------CGACA---TTCGGATGTC................................................................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TCCAGCATAACTCCCAGGTACCTTATCGC.....................................................	29	3	1.67	5	0	5	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGTCCAGCATAACTCCCAGGTAC.............................................................	23	5	1.60	8	0	8	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TCCAGCATAACTCCCAGGTACC............................................................	22	5	1.60	8	0	7	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................TACCTTATCGCCCGTTTTGAGG..........................................	22	2	1.50	3	0	3	0	0	0	0	0	0	0	0
........................................................................................................................................TGTCTG--CTGCAG-GTGCTCTCTAAA----------------------..................................................................................................	24	5	1.40	7	0	7	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TCCAGCATAACTCCCAGGTACCTTA.........................................................	25	5	1.20	6	0	4	0	0	0	0	0	2	0	0
........................................................................................................................................TGTCTG--CTGCAG-GTGCTCTCTAAA----------------------CG................................................................................................	26	5	1.20	6	0	4	0	0	0	0	0	2	0	0
........................................................................................................................................................TGCTCTCTAAA----------------------CGACA---TTCGGAT...................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................TGCAG-GTGCTCTCTAAA----------------------CGACA---..........................................................................................	22	5	1.00	5	0	4	0	0	0	0	0	1	0	0
................................................................................................................................................CTGCAG-GTGCTCTCTAAA----------------------CGACA---TTC.......................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---TTCGGATGTCCAGCATAACT......................................................................	29	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................TT------CCTCCTACAGTTATCCTCGCCG...	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................T------CCTCCTACAGTTATCCTCGCCGT..	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................CGCCCGTTTTGAGGTAATTGTGG.................................	23	1	1.00	1	0	0	0	0	0	0	0	1	0	0
....................................................................................................................................................................................................................TCCCAGGTACCTTATCGCCCGTTT...............................................	24	2	1.00	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................TGCTCTCTAAA----------------------CGACA---TTCGGATGTA................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................TGCTCTCTAAA----------------------CGACA---TTCGGATGT.................................................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0
................................................................................................................................................................................................................TAACTCCCAGGTACCTTATCGCCCGTTT...............................................	28	2	1.00	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................GACA---TTCGGATGTCCAGCATAACTCC....................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TCGGATGTCCAGCATAACTCCCA..................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................GCAG-GTGCTCTCTAAA----------------------CGACA---TTCG......................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................ATGTCCAGCATAACTCCCAGG................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---TTCGGATGTCCAGC............................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................CGGATGTCCAGCATAACTCCCAGGTA..............................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GGATGTCCAGCATAACTCCCAGGTAC.............................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TCCAGCATAACTCCCAGGTACCTTATC.......................................................	27	3	1.00	3	0	3	0	0	0	0	0	0	0	0
........................................................................................................................................TGTCTG--CTGCAG-GTGCTCTCTAAA----------------------C.................................................................................................	25	5	1.00	5	0	5	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................GTACCTTATCGCCCGTTTTGAGGTAATT.....................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................CAG-GTGCTCTCTAAA----------------------CGACA---TTCGGA....................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TCCAGCATAACTCCCAGGTACCTT..........................................................	24	5	1.00	5	0	5	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................TTCGGATGTCCAGCATAACTCC....................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................CA---TTCGGATGTCCAGCATAACTCCCAGG................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................TACCTTATCGCCCGTTTTGAGGTA........................................	24	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................GCATAACTCCCAGGTACCTTATCGCCC...................................................	27	2	1.00	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................CTCTCTAAA----------------------CGACA---TTCGGATG..................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TCCAGCATAACTCCCAGGTAC.............................................................	21	5	1.00	5	0	5	0	0	0	0	0	0	0	0
............................................................................................................................................................................................CA---TTCGGATGTCCAGCATAACTCCCAG.................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................CGGATGTCCAGCATAACTCCCAGG................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................ACCTTATCGCCCGTTTTGAGGTAA.......................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................ACCTTATCGCCCGTTTTGAGGTAATTG....................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................GGTT------CCTCCTACAGTTATCCTCGCCG...	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................TCTAAA----------------------CGACA---TTCGGATGTCCAGC............................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TCGGATGTCCAGCATAACTC.....................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................TT------CCTCCTACAGTTATCCTCGCCGTC.	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................TCTAAA----------------------CGACA---TTCGGATGTCCAGCA...........................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.................................................................................................................................................................................................TTCGGATGTCCAGCATAACTAA....................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---TTCGGATGTCCAGCATA.........................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................TGTCTG--CTGCAG-GTGCTCTCTAAA----------------------CGA...............................................................................................	27	5	1.00	5	0	5	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................GTACCTTATCGCCCGTTTTGAGGTAA.......................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TCGGATGTCCAGCATAACTCT....................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................G--CTGCAG-GTGCTCTCTAAA----------------------CGACA---TT........................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................A---TTCGGATGTCCAGCATAACTCCCAG.................................................................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0
.....................................................................................................................................................................................................GATGTCCAGCATAACTCCCAGG................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................GACA---TTCGGATGTCCAGCATAACTC.....................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................TCTCTAAA----------------------CGACA---TTCGGATGTCCAGC............................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................TG--CTGCAG-GTGCTCTCTAAA----------------------CGACA---TTC.......................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
TGG-----------------------------------------------------------------------------------------------------------------------------------TGTGTCTG--CTGCAG-GTGCTCT.............................................................................................................................	24	4	1.00	4	0	4	0	0	0	0	0	0	0	0
.................................................................................................................................................TGCAG-GTGCTCTCTAAA----------------------CGA...............................................................................................	20	5	0.80	4	0	3	0	0	0	0	0	1	0	0
..........................................................................................................................................TCTG--CTGCAG-GTGCTCTCTAAA----------------------CGA...............................................................................................	25	5	0.80	4	0	3	0	0	0	0	0	1	0	0
.........................................................................................................................................................................................................TCCAGCATAACTCCCAGG................................................................	18	5	0.80	4	0	4	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGTCCAGCATAACTCCCAGG................................................................	20	5	0.80	4	0	4	0	0	0	0	0	0	0	0
.................................................................................................................................................TGCAG-GTGCTCTCTAAA----------------------CGAC..............................................................................................	21	5	0.80	4	0	4	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGTCCAGCATAACTCCCAGGTACC............................................................	24	5	0.60	3	0	3	0	0	0	0	0	0	0	0
TGG-----------------------------------------------------------------------------------------------------------------------------------TGTGTCTG--CTGCAG-GTG.................................................................................................................................	20	5	0.60	3	0	3	0	0	0	0	0	0	0	0
TGG-----------------------------------------------------------------------------------------------------------------------------------TGTGTCTG--CTGCAG-GTGCTC..............................................................................................................................	23	4	0.50	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................TGTGTCTG--CTGCAG-GTGCTCTCTAAA----------------------..................................................................................................	26	4	0.50	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................TGTGTCTG--CTGCAG-GTGCTCTCTAAA----------------------C.................................................................................................	27	4	0.50	2	0	1	0	0	0	0	0	1	0	0
.......................................................................................................................................................................................................................CAGGTACCTTATCGCCCGTTTTGAGG..........................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................TCCCAGGTACCTTATCGCCCGTT................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................GTACCTTATCGCCCGTTTTGAGGTA........................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................TACCTTATCGCCCGTTTTGAG...........................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................GGTACCTTATCGCCCGTTTTGAGG..........................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGTCCAGCATAACTCCCAG.................................................................	19	5	0.40	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................TGTCTG--CTGCAG-GTGCTCTCTA..........................................................................................................................	22	5	0.40	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................................................................CTG--CTGCAG-GTGCTCTCTAAA----------------------CGAC..............................................................................................	25	5	0.40	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TCCAGCATAACTCCCAGGTACCT...........................................................	23	5	0.40	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................TG--CTGCAG-GTGCTCTCTAAA----------------------CGACA---..........................................................................................	25	5	0.40	2	0	1	0	0	0	0	0	0	1	0
......................................................................................................................................TGTGTCTG--CTGCAG-GTGCTCT.............................................................................................................................	21	5	0.40	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGTCCAGCATAACTCCCAGGTA..............................................................	22	5	0.40	2	0	2	0	0	0	0	0	0	0	0
.GG-----------------------------------------------------------------------------------------------------------------------------------TGTGTCTG--CTGCAG-GTGC................................................................................................................................	20	5	0.40	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................TG--CTGCAG-GTGCTCTCTAAA----------------------CGA...............................................................................................	23	5	0.40	2	0	1	0	0	0	0	0	0	1	0
.........................................................................................................................................................................................................TCCAGCATAACTCCCAGGTACCTTATA.......................................................	27	5	0.40	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................TGCAG-GTGCTCTCTAAA----------------------CG................................................................................................	19	5	0.40	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................CCAGCATAACTCCCAGGTACCTTATCGC.....................................................	28	3	0.33	1	0	0	1	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TCCAGCATAACTCCCAGGTACCTTATCG......................................................	28	3	0.33	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................TGTCTG--CTGCAG-GTGCTCTC............................................................................................................................	20	6	0.33	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................TGTGTCTG--CTGCAG-GTGCTCTCTAAA----------------------CG................................................................................................	28	4	0.25	1	0	1	0	0	0	0	0	0	0	0
TGG-----------------------------------------------------------------------------------------------------------------------------------TGTGTCTG--CTGCAG-GTGC................................................................................................................................	21	4	0.25	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................TGTGTCTG--CTGCAG-GTGCTCTCTAA.........................................................................................................................	25	4	0.25	1	0	0	0	0	1	0	0	0	0	0
TGG-----------------------------------------------------------------------------------------------------------------------------------TGTGTCTG--CTGCAG-GTGCTCTC............................................................................................................................	25	4	0.25	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................TGTGTCTG--CTGCAG-GTGCTCTCTA..........................................................................................................................	24	4	0.25	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................TGTGTCTG--CTGCAG-GTGCTCTCTAAA----------------------A.................................................................................................	27	4	0.25	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TCCAGCATAACTCCCAGGTACCTC..........................................................	24	5	0.20	1	0	0	1	0	0	0	0	0	0	0
TGG-----------------------------------------------------------------------------------------------------------------------------------TGTGTCTG--CTGCAG-G...................................................................................................................................	18	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGTCCAGCATAACTCCCAGGTAAA............................................................	24	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................GTCTG--CTGCAG-GTGCTCTCTAAA----------------------CGA...............................................................................................	26	5	0.20	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................CAGCATAACTCCCAGGTACCTTAT........................................................	24	5	0.20	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................CTG--CTGCAG-GTGCTCTCTAAA----------------------CG................................................................................................	23	5	0.20	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................GTCCAGCATAACTCCCAGGTAA.............................................................	22	5	0.20	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................TG--CTGCAG-GTGCTCTCTAAA----------------------CGAA..............................................................................................	24	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TCCAGCATAACTCCCAGGTACA............................................................	22	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................GTCTG--CTGCAG-GTGCTCTCTAAA----------------------CG................................................................................................	25	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................GTCTG--CTGCAG-GTGCTCTCTAAA----------------------..................................................................................................	23	5	0.20	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................CCAGCATAACTCCCAGGTACCTTAT........................................................	25	5	0.20	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................TGTCTG--CTGCAG-GTGCTCTCTAAA----------------------AA................................................................................................	26	5	0.20	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................TG--CTGCAG-GTGCTCTCTAAA----------------------CGAC..............................................................................................	24	5	0.20	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................GTCCAGCATAACTCCCAGGTAC.............................................................	22	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................GTCTG--CTGCAG-GTGCTCTCTAAA----------------------C.................................................................................................	24	5	0.20	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................GCAG-GTGCTCTCTAAA----------------------CGACA---..........................................................................................	21	5	0.20	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................TGTGTCTG--CTGCAG-GTGCTCTCC...........................................................................................................................	23	5	0.20	1	0	0	1	0	0	0	0	0	0	0
........................................................................................................................................TGTCTG--CTGCAG-GTGCTCTCTAAA----------------------CGAC..............................................................................................	28	5	0.20	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................GTCCAGCATAACTCCCAGGTACCTTAT........................................................	27	5	0.20	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................CTGCAG-GTGCTCTCTAAA----------------------CGACA---..........................................................................................	23	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TCCAGCATAACTCCCAGGTA..............................................................	20	5	0.20	1	0	1	0	0	0	0	0	0	0	0
TGG-----------------------------------------------------------------------------------------------------------------------------------TGTGTCTG--CTGCAG-GT..................................................................................................................................	19	5	0.20	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................TGTGTCTG--CTGCAG-GTGCTCTCT...........................................................................................................................	23	5	0.20	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................TGTCTG--CTGCAG-GTGCTCTCTAAA----------------------A.................................................................................................	25	5	0.20	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................TGTCTG--CTGCAG-GTGCTCTCT...........................................................................................................................	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................TGTCTG--CTGCAG-GTGCTCT.............................................................................................................................	19	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TCCAGCATAACTCCCAGGA...............................................................	19	6	0.17	1	0	1	0	0	0	0	0	0	0	0

droPer2

TGG-----------------------------------------------------------------------------------------------------------------------------------TGTGTCTG--CTGCAG-GTGTTCTCTAAA----------------------CGACA---GCCTGGTGTCCAGCATAACTCCCAGGTACCTTATCGCTCGTTTTGAGGTAATTGAGGCT------CCTCATACGGTTATCCTCGCCGTCT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTCCAGCA...........................................................................	24	2	85.50	171	0	169	2	0	0	0
...............................................................................................................................................................................................................................TTATCGCTCGTTTTGAGGTAATTGAGG.................................	27	1	58.00	58	0	49	7	0	0	2
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTCCAGC............................................................................	23	2	45.00	90	0	86	4	0	0	0
...............................................................................................................................................................................................................................TTATCGCTCGTTTTGAGGTAATTGAGGC................................	28	1	45.00	45	0	30	0	0	0	15
...............................................................................................................................................................................................................................TTATCGCTCGTTTTGAGGTAATTG....................................	24	2	25.50	51	0	48	3	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTCCAG.............................................................................	22	2	22.00	44	0	42	2	0	0	0
...............................................................................................................................................................................................................................TTATCGCTCGTTTTGAGGTAATTGAG..................................	26	1	20.00	20	3	14	1	0	0	2
.................................................................................................................................................TGCAG-GTGTTCTCTAAA----------------------CGACA---GCCT......................................................................................	26	1	10.00	10	9	1	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTCCAGCATAAC.......................................................................	28	2	10.00	20	3	17	0	0	0	0
.................................................................................................................................................TGCAG-GTGTTCTCTAAA----------------------CGACA---GCC.......................................................................................	25	1	9.00	9	7	2	0	0	0	0
....................................................................................................................................................................................................................TCCCAGGTACCTTATCGCTCGTTT...............................................	24	2	8.00	16	0	16	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTCCA..............................................................................	21	2	7.50	15	0	15	0	0	0	0
............................................................................................................................................................................................................................................TGAGGTAATTGAGGCT------CCTCATACGG...............	26	1	6.00	6	0	6	0	0	0	0
.................................................................................................................................................................................................................................................TAATTGAGGCT------CCTCATACGGTTATCC.........	27	1	6.00	6	0	6	0	0	0	0
...........................................................................................................................................................................................................................TACCTTATCGCTCGTTTTGAGGTAAT......................................	26	2	5.50	11	0	11	0	0	0	0
................................................................................................................................................................AAA----------------------CGACA---GCCTGGTGTCCAGCA...........................................................................	23	2	5.50	11	0	11	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTCCAGCATAA........................................................................	27	2	5.00	10	0	9	1	0	0	0
...........................................................................................................................................................................................................................................................T------CCTCATACGGTTATCCTCGCCG...	23	1	5.00	5	0	5	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTCCAGCAT..........................................................................	25	2	4.50	9	0	8	1	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTCCAGCATA.........................................................................	26	2	4.50	9	0	9	0	0	0	0
................................................................................................................................................................................................................TAACTCCCAGGTACCTTATCGCTCG..................................................	25	1	4.00	4	0	4	0	0	0	0
........................................................................................................................................................TGTTCTCTAAA----------------------CGACA---GCCTGGTG..................................................................................	24	1	4.00	4	1	3	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTCC...............................................................................	20	2	4.00	8	0	8	0	0	0	0
..........................................................................................................................................................................................................................GTACCTTATCGCTCGTTTTGAGG..........................................	23	2	3.00	6	0	6	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTCCAGCAA..........................................................................	25	2	3.00	6	0	6	0	0	0	0
................................................................................................................................................................................................................................TATCGCTCGTTTTGAGGTAATTGAGG.................................	26	1	3.00	3	0	3	0	0	0	0
................................................................................................................................................................AAA----------------------CGACA---GCCTGGTGTCCAGC............................................................................	22	2	2.50	5	0	5	0	0	0	0
...........................................................................................................................................................................................................................TACCTTATCGCTCGTTTTGAGGTAATTG....................................	28	2	2.50	5	0	5	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTC................................................................................	19	2	2.50	5	0	5	0	0	0	0
....................................................................................................................................................................................................................TCCCAGGTACCTTATCGCTCGTTTTG.............................................	26	1	2.00	2	0	2	0	0	0	0
........................................................................................................................................................TGTTCTCTAAA----------------------CGACA---GCCTGGTGT.................................................................................	25	1	2.00	2	0	2	0	0	0	0
......................................................................................................................................TGTGTCTG--CTGCAG-GTGTTCTCTAAA----------------------C.................................................................................................	27	1	2.00	2	0	2	0	0	0	0
............................................................................................................................................TG--CTGCAG-GTGTTCTCTAAA----------------------CGACA---GC........................................................................................	27	1	2.00	2	0	2	0	0	0	0
........................................................................................................................................................TGTTCTCTAAA----------------------CGACA---GCCTGGT...................................................................................	23	1	2.00	2	0	2	0	0	0	0
................................................................................................................................................................................................................TAACTCCCAGGTACCTTATCGCTCGT.................................................	26	1	2.00	2	0	2	0	0	0	0
........................................................................................................................................................................................................................AGGTACCTTATCGCTCGTTTTGAGG..........................................	25	1	2.00	2	0	2	0	0	0	0
.......................................................................................................................................................................................................................CAGGTACCTTATCGCTCGTTTTGAGG..........................................	26	1	2.00	2	0	2	0	0	0	0
............................................................................................................................................................................................................................................TGAGGTAATTGAGGCT------CCTCATA..................	23	1	2.00	2	0	2	0	0	0	0
....................................................................................................................................................................................................................................................................TCATACGGTTATCCTCGCCGTCT	23	1	2.00	2	0	2	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTCCAGCAC..........................................................................	25	2	2.00	4	0	4	0	0	0	0
...........................................................................................................................................................................................................................................................T------CCTCATACGGTTATCCTCGCC....	22	1	2.00	2	0	2	0	0	0	0
...........................................................................................................................................................................................................................................................T------CCTCATACGGTTATCCTCGCCGTCT	26	1	2.00	2	0	2	0	0	0	0
........................................................................................................................................................TGTTCTCTAAA----------------------CGACA---GCCTGGTGTCCA..............................................................................	28	1	2.00	2	0	2	0	0	0	0
.................................................................................................................................................TGCAG-GTGTTCTCTAAA----------------------CGACA---GCAA......................................................................................	26	1	2.00	2	0	2	0	0	0	0
................................................................................................................................................................AAA----------------------CGACA---GCCTGGTGTCCAG.............................................................................	21	2	1.50	3	0	3	0	0	0	0
....................................................................................................................................................................................................................TCCCAGGTACCTTATCGCTCGTT................................................	23	2	1.50	3	0	3	0	0	0	0
...............................................................................................................................................................................................................................TTATCGCTCGTTTTGAGGTAATT.....................................	23	2	1.50	3	0	3	0	0	0	0
................................................................................................................................................................................................................................TATCGCTCGTTTTGAGGTAATTG....................................	23	2	1.50	3	0	3	0	0	0	0
..................................................................................................................................................................................................................................TCGCTCGTTTTGAGGTAATTGAGG.................................	24	2	1.50	3	0	1	1	1	0	0
......................................................................................................................................................................................................................CCAGGTACCTTATCGCTCGTTT...............................................	22	2	1.50	3	0	3	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTCCAGT............................................................................	23	2	1.50	3	0	3	0	0	0	0
...........................................................................................................................................................................................................................TACCTTATCGCTCGTTTTGAGGTAA.......................................	25	2	1.50	3	0	3	0	0	0	0
........................................................................................................................................TGTCTG--CTGCAG-GTGTTCTCTAAA----------------------A.................................................................................................	25	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................TGTGTCTG--CTGCAG-GTGTTCT.............................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
..................................................................................................................................................GCAG-GTGTTCTCTAAA----------------------CGACA---GCC.......................................................................................	24	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................CAG-GTGTTCTCTAAA----------------------CGACA---GCC.......................................................................................	23	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................TGTTCTCTAAA----------------------CGACA---GCCTGGTGTCC...............................................................................	27	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................TCTAAA----------------------CGACA---GCCTGGTGTCCAGC............................................................................	25	2	1.00	2	2	0	0	0	0	0
........................................................................................................................................TGTCTG--CTGCAG-GTGTTCTCTAAA----------------------CG................................................................................................	26	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................TTATCGCTCGTTTTGAGGTAATTGAGA.................................	27	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................................................................................................................TCGTTTTGAGGTAATTGAGGCT------CCTCAA...................	28	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................GAGGTAATTGAGGCT------CCTCATACGG...............	25	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................TGTGTCTG--CTGCAG-GTGTTC..............................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................G--CTGCAG-GTGTTCTCTAAA----------------------CGACA---GCC.......................................................................................	27	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................TCTAAA----------------------CGACA---GCCTGGTGTC................................................................................	21	2	1.00	2	1	0	1	0	0	0
.............................................................................................................................................G--CTGCAG-GTGTTCTCTAAA----------------------CGACA---G.........................................................................................	25	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................TGTGTCTG--CTGCAG-GTGTTCTC............................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................TG--CTGCAG-GTGTTCTCTAAA----------------------CG................................................................................................	22	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................T------CCTCATACGGTTATCCTCGCCGTC.	25	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................TGTTCTCTAAA----------------------CGACA---GCCTG.....................................................................................	21	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................................................................................CTCCCAGGTACCTTATCGCTCGTTT...............................................	25	2	1.00	2	0	2	0	0	0	0
..................................................................................................................................................GCAG-GTGTTCTCTAAA----------------------CGACA---GCCT......................................................................................	25	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................................................................................TAATTGAGGCT------CCTCATACGGTTATCCT........	28	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................TGTGTCTG--CTGCAG-GTGTTCTCTAAA----------------------AA................................................................................................	28	1	1.00	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................TCATACGGTTATCCTCGCCG...	20	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................TACCTTATCGCTCGTTTTGAGG..........................................	22	2	1.00	2	0	2	0	0	0	0
................................................................................................................................................................................................................TAACTCCCAGGTACCTTATCGCTA...................................................	24	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................TTATCGCTCGTTTTGAGGTAATTGA...................................	25	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................TTATCGCTCGTTTTGAGGTAATTGAAA.................................	27	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................T------CCTCATACGGTTATCCTCGCCGT..	24	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................TTATCGCTCGTTTTGAGGTAATTGAGAA................................	28	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................................ACCTTATCGCTCGTTTTGAGGTAATTG....................................	27	2	1.00	2	0	2	0	0	0	0
.......................................................................................................................................................................................................................................................AGGCT------CCTCATACGGTTATCCTCG......	24	1	1.00	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................TCATACGGTTATCCTCGCCGTC.	22	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................TGTGTCTG--CTGCAG-GTGTTCTCTAAA----------------------A.................................................................................................	27	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................GTGTCTG--CTGCAG-GTGTTCTCTAAA----------------------..................................................................................................	25	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................TCTG--CTGCAG-GTGTTCTCTAAA----------------------CGA...............................................................................................	25	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................TGCAG-GTGTTCTCTAAA----------------------CGACA---GCCC......................................................................................	26	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................GTCTG--CTGCAG-GTGTTCTCTAAA----------------------A.................................................................................................	24	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................TATCGCTCGTTTTGAGGTAATTGAGGC................................	27	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................................................TGAGGTAATTGAGGCT------CCTCAA...................	22	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................TACCTTATCGCTCGTTTTGAGGTA........................................	24	2	1.00	2	0	2	0	0	0	0
....................................................................................................................................................................................................................TCCCAGGTACCTTATCGCTCGTTTTGAGG..........................................	29	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................GGCT------CCTCATACGGTTATCCTCG......	23	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................TGAGGCT------CCTCATACGGTTATC..........	22	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................TAACTCCCAGGTACCTTATCGCT....................................................	23	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................TCTAAA----------------------CGACA---GCCTGGTA..................................................................................	19	2	1.00	2	2	0	0	0	0	0
......................................................................................................................................................................................................................................TCGTTTTGAGGTAATTGAGGCT------CCTCA....................	27	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................TAACTCCCAGGTACCTTATCGCTCGTTT...............................................	28	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTCCAGCATAACT......................................................................	29	2	1.00	2	0	2	0	0	0	0
............................................................................................................................................TG--CTGCAG-GTGTTCTCTAAA----------------------CGACA---GCC.......................................................................................	28	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................TAACTCCCAGGTACCTTATCGCTC...................................................	24	1	1.00	1	0	1	0	0	0	0
TGG-----------------------------------------------------------------------------------------------------------------------------------TGTGTCTG--CTGCAG-GTGT................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................TGTTCTCTAAA----------------------CGACA---GCCTGGTGA.................................................................................	25	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................TGTGTCTG--CTGCAG-GTGTTCTCTAAA----------------------..................................................................................................	26	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................TGCAG-GTGTTCTCTAAA----------------------CGACA---..........................................................................................	22	1	1.00	1	0	0	1	0	0	0
........................................................................................................................................................TGTTCTCTAAA----------------------CGACA---GCCTGG....................................................................................	22	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................TGTTCTCTAAA----------------------CGACA---GCCTGGTGTC................................................................................	26	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................TACGGTTATCCTCGCCGTCT	20	11	0.73	8	0	8	0	0	0	0
..........................................................................................................................................................................................................CCAGCATAACTCCCAGGTACCTTATCGC.....................................................	28	3	0.67	2	0	2	0	0	0	0
..............................................................................................................................................................................................................CATAACTCCCAGGTACCTTATCGC.....................................................	24	3	0.67	2	0	2	0	0	0	0
............................................................................................................................................................................................................................ACCTTATCGCTCGTTTTGAGG..........................................	21	2	0.50	1	0	1	0	0	0	0
...........................................................................................................................................................TCTCTAAA----------------------CGACA---GCCTGGTGT.................................................................................	22	2	0.50	1	0	1	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTCA...............................................................................	20	2	0.50	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................CTTATCGCTCGTTTTGAGGTAATTG....................................	25	2	0.50	1	0	1	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTCCAGCG...........................................................................	24	2	0.50	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................GTACCTTATCGCTCGTTTTGAGGTAATTG....................................	29	2	0.50	1	0	1	0	0	0	0
................................................................................................................................................................AAA----------------------CGACA---GCCTGGTGTCCAGCC...........................................................................	23	2	0.50	1	0	1	0	0	0	0
.........................................................................................................................................................................................CGACA---GCCTGGTGTCCAG.............................................................................	18	2	0.50	1	0	1	0	0	0	0
.............................................................................................................................................................TCTAAA----------------------CGACA---GCCTGGTGTCCA..............................................................................	23	2	0.50	1	0	1	0	0	0	0
.............................................................................................................................................................TCTAAA----------------------CGACA---GCCTGGTG..................................................................................	19	2	0.50	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................TACCTTATCGCTCGTTTTGAGA..........................................	22	2	0.50	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................TACCTTATCGCTCGTTTTGAGGTAATT.....................................	27	2	0.50	1	0	1	0	0	0	0
.............................................................................................................................................................TCTAAA----------------------CGACA---GCCTGGTGTCCAG.............................................................................	24	2	0.50	1	0	1	0	0	0	0
....................................................................................................................................................................................................................TCCCAGGTACCTTATCGCTCGT.................................................	22	2	0.50	1	0	1	0	0	0	0
...........................................................................................................................................................TCTCTAAA----------------------CGACA---GCCTGGTGTCCAGCA...........................................................................	28	2	0.50	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................TTATCGCTCGTTTTGAGGTAATTGGTA.................................	27	2	0.50	1	0	1	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTTT...............................................................................	20	2	0.50	1	0	1	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTCCAGA............................................................................	23	2	0.50	1	0	1	0	0	0	0
.............................................................................................................................................................TCTAAA----------------------CGACA---GCCTGGTGTCCAGCA...........................................................................	26	2	0.50	1	0	1	0	0	0	0
..............................................................................................................................................................CTAAA----------------------CGACA---GCCTGGTGTCCAGC............................................................................	24	2	0.50	1	0	0	1	0	0	0
...........................................................................................................................................................TCTCTAAA----------------------CGACA---GCCTGGTGTC................................................................................	23	2	0.50	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................CCCAGGTACCTTATCGCTCGTTT...............................................	23	2	0.50	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................CCTTATCGCTCGTTTTGAGGTAATTG....................................	26	2	0.50	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................CCCAGGTACCTTATCGCTCGT.................................................	21	2	0.50	1	0	1	0	0	0	0
..........................................................................................................................................................................................GACA---GCCTGGTGTCCAGCATAACTC.....................................................................	25	2	0.50	1	0	1	0	0	0	0
.........................................................................................................................................................................................CGACA---GCCTGGTGTCCAGCATAACTC.....................................................................	26	2	0.50	1	1	0	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTCCAGCT...........................................................................	24	2	0.50	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................GTACCTTATCGCTCGTTTTGAGGTAA.......................................	26	2	0.50	1	0	1	0	0	0	0
................................................................................................................................................................AAA----------------------CGACA---GCCTGGTGTCCAGCAT..........................................................................	24	2	0.50	1	0	1	0	0	0	0
.................................................................................................................................................................................................................................ATCGCTCGTTTTGAGGTAATTGAGG.................................	25	2	0.50	1	0	1	0	0	0	0
.................................................................................................................................................................................................................................ATCGCTCGTTTTGAGGTAATTGAGGC................................	26	2	0.50	1	0	1	0	0	0	0
....................................................................................................................................................................................................................TCCCAGGTACCTTATCGCTCG..................................................	21	2	0.50	1	0	1	0	0	0	0
..............................................................................................................................................................CTAAA----------------------CGACA---GCCTGGTGTCCAGCA...........................................................................	25	2	0.50	1	0	1	0	0	0	0
............................................................................................................................................................CTCTAAA----------------------CGACA---GCCTGGTGT.................................................................................	21	2	0.50	1	0	1	0	0	0	0
....................................................................................................................................................................................................................TCCCAGGTACCTTATCGCTC...................................................	20	2	0.50	1	1	0	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTCCAGCATAT........................................................................	27	2	0.50	1	0	1	0	0	0	0
...............................................................................................................................................................TAAA----------------------CGACA---GCCTGGTGTCCAGTT...........................................................................	24	2	0.50	1	0	1	0	0	0	0
...........................................................................................................................................................................................ACA---GCCTGGTGTCCAGCATAACT......................................................................	23	2	0.50	1	0	1	0	0	0	0
............................................................................................................................................................................................CA---GCCTGGTGTCCAGCATAACTCCCAGG................................................................	28	2	0.50	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................TTATCGCTCGTTTTGAGGTAAT......................................	22	2	0.50	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................TCGCTCGTTTTGAGGTAATTG....................................	21	3	0.33	1	0	1	0	0	0	0
..........................................................................................................................................................................................................CCAGCATAACTCCCAGGTACCTTATCG......................................................	27	3	0.33	1	0	1	0	0	0	0
.........................................................................................................................................................................................................TCCAGCATAACTCCCAGGTACCTTATCGC.....................................................	29	3	0.33	1	0	1	0	0	0	0
................................................................................................................................................................................................................TAACTCCCAGGTACCTTATC.......................................................	20	3	0.33	1	0	1	0	0	0	0
.........................................................................................................................................................................................................TCCAGCATAACTCCCAGGTACCTTATC.......................................................	27	3	0.33	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................TCGCTCGTTTTGAGGTAAT......................................	19	3	0.33	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................TACCTTATCGCTCGTTTTG.............................................	19	3	0.33	1	0	1	0	0	0	0
......................................................................................................................................................................................................................................TCGTTTTGAGGTAATTGAGGCT------C........................	23	9	0.11	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................CGTTTTGAGGTAATTGAGG.................................	19	9	0.11	1	0	1	0	0	0	0
.......................................................................................................................................................................................................TGTCCAGCATAACTCCCAGGTAC.............................................................	23	11	0.09	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................TACGGTTATCCTCGCCGTC.	19	11	0.09	1	0	1	0	0	0	0
TGG-----------------------------------------------------------------------------------------------------------------------------------TGTGTCTG--CTGCAG-GTG.................................................................................................................................	20	11	0.09	1	0	1	0	0	0	0
.........................................................................................................................................................................................................TCCAGCATAACTCCCAGGTACC............................................................	22	11	0.09	1	0	1	0	0	0	0
.......................................................................................................................................................................................................TGTCCAGCATAACTCCCAGGTACCTTAT........................................................	28	11	0.09	1	0	1	0	0	0	0
TGG-----------------------------------------------------------------------------------------------------------------------------------TGTGTCTG--CTGCAG-TA..................................................................................................................................	19	13	0.08	1	0	1	0	0	0	0

droWil2

G-------------------------------------------------------------------------------------------------------------------------------------------------------TGTTCTCTAAA----------------------AGTCA---GCCTTGTGTCGATCATGACTCCTAGGTATTTTAGAGCTCGCTTAGAGACAACGGTGGTG------TCGCCGACCCTAATGGTGGCGGTCT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
................................................................................................................................................................................................................................TAGAGCTCGCTTAGAGACAACGGTGG.................................	26	1	72.00	72	0	35	2	35	0
....................................................................................................................................................................................................................TCCTAGGTATTTTAGAGCTCGCT................................................	23	1	55.00	55	0	48	0	7	0
................................................................................................................................................................................................................................TAGAGCTCGCTTAGAGACAACGGTG..................................	25	1	47.00	47	0	2	1	44	0
.......................................................................................................................................................................................................................TAGGTATTTTAGAGCTCGCTTAGAG...........................................	25	1	22.00	22	0	2	0	20	0
...........................................................................................................................................................................................................................................TAGAGACAACGGTGGTG------TCGCCGACCC...............	27	1	14.00	14	0	12	0	2	0
.......................................................................................................................................................................................................TGTCGATCATGACTCCTAGGTATTT...........................................................	25	1	14.00	14	0	13	0	1	0
.......................................................................................................................................................................................................................................................TGGTG------TCGCCGACCCTAATGGTGG......	24	1	12.00	12	0	4	0	8	0
.......................................................................................................................................................................................................................................CGCTTAGAGACAACGGTGGTG------TCGC.....................	25	1	12.00	12	0	6	0	6	0
...............................................................................................................................................................TAAA----------------------AGTCA---GCCTTGTGTCGATCATGA........................................................................	27	7	8.14	57	0	22	0	35	0
...........................................................................................................................................................................................................................................TAGAGACAACGGTGGTG------TCGCCGAC.................	25	1	8.00	8	0	7	0	1	0
................................................................................................................................................................................................................................TAGAGCTCGCTTAGAGACAACGGTGGT................................	27	1	8.00	8	0	2	0	6	0
.......................................................................................................................................................................................................................TAGGTATTTTAGAGCTCGCTTAGAGA..........................................	26	1	8.00	8	0	2	0	6	0
........................................................................................................................................................TGTTCTCTAAA----------------------AGTCA---GCCTTGTGTCGA..............................................................................	28	2	6.50	13	0	10	0	3	0
....................................................................................................................................................................................................................TCCTAGGTATTTTAGAGCTCGCTTAG.............................................	26	1	6.00	6	0	5	0	1	0
...................................................................................................................................................................................................................CTCCTAGGTATTTTAGAGCTCGCT................................................	24	1	6.00	6	0	6	0	0	0
.......................................................................................................................................................................................................................................CGCTTAGAGACAACGGTGGTG------TC.......................	23	1	6.00	6	0	0	0	6	0
....................................................................................................................................................................................................TTGTGTCGATCATGACTCCTAGGTA..............................................................	25	1	5.00	5	1	4	0	0	0
..............................................................................................................................................................................................................................TTTAGAGCTCGCTTAGAGACAACGGTG..................................	27	1	5.00	5	0	0	0	5	0
...........................................................................................................................................................................................................................................TAGAGACAACGGTGGTG------TCGCCGA..................	24	1	5.00	5	0	5	0	0	0
........................................................................................................................................................TGTTCTCTAAA----------------------AGTCA---GCCTTGTGT.................................................................................	25	2	5.00	10	0	8	0	2	0
.................................................................................................................................................................................................................................................CAACGGTGGTG------TCGCCGACCCTAATGG.........	27	1	5.00	5	0	5	0	0	0
...........................................................................................................................................................................................................................................TAGAGACAACGGTGGTG------TCGCCGACC................	26	1	5.00	5	0	5	0	0	0
...............................................................................................................................................................................................................................TTAGAGCTCGCTTAGAGACAACGGTGG.................................	27	1	5.00	5	0	2	0	3	0
.............................................................................................................................................................TCTAAA----------------------AGTCA---GCCTTGTGTCGATCA...........................................................................	26	7	4.71	33	0	23	0	10	0
...........................................................................................................................................................................................TCA---GCCTTGTGTCGATCATGACTCC....................................................................	25	7	4.29	30	0	29	0	1	0
.......................................................................................................................................................................................................................TAGGTATTTTAGAGCTCGCTTAGAGAC.........................................	27	1	4.00	4	0	1	0	3	0
.............................................................................................................................................................................................................TCATGACTCCTAGGTATTTTAGAGCT....................................................	26	1	4.00	4	1	2	0	1	0
.......................................................................................................................................................................................................................................CGCTTAGAGACAACGGTGGTG------T........................	22	1	4.00	4	0	0	1	3	0
.....................................................................................................................................................................................................TGTGTCGATCATGACTCCTAGGTATT............................................................	26	1	4.00	4	0	4	0	0	0
.....................................................................................................................................................................................................................CCTAGGTATTTTAGAGCTCGCT................................................	22	1	4.00	4	0	4	0	0	0
.......................................................................................................................................................................................................................................CGCTTAGAGACAACGGTGGTG------TCG......................	24	1	4.00	4	0	2	0	2	0
.......................................................................................................................................................................................................................................CGCTTAGAGACAACGGTGGTG------TCGCC....................	26	1	4.00	4	0	4	0	0	0
.............................................................................................................................................................................................................TCATGACTCCTAGGTATTTTAGAGC.....................................................	25	1	4.00	4	0	2	0	2	0
..................................................................................................................................................................................................................................................AACGGTGGTG------TCGCCGACCCTAATGG.........	26	1	4.00	4	0	4	0	0	0
...........................................................................................................................................................TCTCTAAA----------------------AGTCA---GCCTTGTGTCGA..............................................................................	25	7	3.71	26	0	14	0	12	0
....................................................................................................................................................................................................TTGTGTCGATCATGACTCCTAGGTAT.............................................................	26	1	3.00	3	0	1	0	2	0
....................................................................................................................................................................................................................TCCTAGGTATTTTAGAGCTCGCTTA..............................................	25	1	3.00	3	0	2	0	1	0
...........................................................................................................................................................................................................................................TAGAGACAACGGTGGTG------TCGCCG...................	23	1	3.00	3	0	1	0	2	0
......................................................................................................................................................................................................................................TCGCTTAGAGACAACGGTGGTG------T........................	23	1	3.00	3	0	1	0	2	0
.................................................................................................................................................................................................................................AGAGCTCGCTTAGAGACAACGGTGG.................................	25	1	3.00	3	0	3	0	0	0
..............................................................................................................................................................................................................................TTTAGAGCTCGCTTAGAGACAACGGTGG.................................	28	1	3.00	3	0	2	0	1	0
.............................................................................................................................................................................................................................TTTTAGAGCTCGCTTAGAGACAACGG....................................	26	2	2.50	5	0	5	0	0	0
..............................................................................................................................................................................................................................TTTAGAGCTCGCTTAGAGACAACGG....................................	25	2	2.50	5	0	4	0	1	0
...............................................................................................................................................................TAAA----------------------AGTCA---GCCTTGTGTCGATCA...........................................................................	24	7	2.43	17	0	11	0	6	0
.................................................................................................................................................................................................................................AGAGCTCGCTTAGAGACAACGGTG..................................	24	1	2.00	2	0	1	0	1	0
...............................................................................................................................................................................................................................TTAGAGCTCGCTTAGAGACAACGGTG..................................	26	1	2.00	2	0	0	0	2	0
................................................................................................................................................................................................................................TAGAGCTCGCTTAGAGACAACGGTGGTG------.........................	28	1	2.00	2	0	1	1	0	0
...........................................................................................................................................................................................................................................TAGAGACAACGGTGGTG------TCGCCGACT................	26	1	2.00	2	0	0	0	2	0
........................................................................................................................................................TGTTCTCTAAA----------------------AGTCA---GCCTTGTGTC................................................................................	26	2	2.00	4	0	3	0	1	0
................................................................................................................................................................................................................................TAGAGCTCGCTTAGAGACAACGGTGT.................................	26	1	2.00	2	0	0	0	2	0
.......................................................................................................................................................................................................................................................TGGTG------TCGCCGACCCTAATGGTGGCG....	26	1	2.00	2	0	2	0	0	0
.....................................................................................................................................................................................................TGTGTCGATCATGACTCCTAGGTATTT...........................................................	27	1	2.00	2	0	1	0	1	0
...................................................................................................................................................................................................................................AGCTCGCTTAGAGACAACGGTGGT................................	24	1	2.00	2	0	2	0	0	0
.......................................................................................................................................................................................................TGTCGATCATGACTCCTAGGTATT............................................................	24	1	2.00	2	0	2	0	0	0
...................................................................................................................................................................................................................................AGCTCGCTTAGAGACAACGGTGGTG------T........................	26	1	2.00	2	0	1	0	1	0
................................................................................................................................................................................................................TGACTCCTAGGTATTTTAGAGCTCGCT................................................	27	1	2.00	2	0	2	0	0	0
.................................................................................................................................................................................................................................................CAACGGTGGTG------TCGCCGACCCTAATG..........	26	1	2.00	2	0	2	0	0	0
.......................................................................................................................................................................................................................................................TGGTG------TCGCCGACCCTAATGGTG.......	23	1	2.00	2	0	2	0	0	0
...............................................................................................................................................................TAAA----------------------AGTCA---GCCTTGTGTCGATCATG.........................................................................	26	7	1.86	13	0	5	0	8	0
................................................................................................................................................................AAA----------------------AGTCA---GCCTTGTGTCGATCATGA........................................................................	26	7	1.71	12	0	6	0	6	0
...............................................................................................................................................................TAAA----------------------AGTCA---GCCTTGTGTCGATCATGAC.......................................................................	28	7	1.71	12	0	9	0	3	0
...........................................................................................................................................................................................TCA---GCCTTGTGTCGATCATGACTCCT...................................................................	26	2	1.50	3	0	2	0	1	0
.....................................................................................................................................................................................................TGTGTCGATCATGACTCCTAGG................................................................	22	2	1.50	3	0	3	0	0	0
..............................................................................................................................................................................................................................TTTAGAGCTCGCTTAGAGACAACGGT...................................	26	2	1.50	3	0	1	0	2	0
................................................................................................................................................................AAA----------------------AGTCA---GCCTTGTGTCGATCATGAC.......................................................................	27	7	1.14	8	0	4	0	3	1
............................................................................................................................................................................................................................................AGAGACAACGGTGGTG------TCGCCGACCC...............	26	1	1.00	1	0	1	0	0	0
.......................................................................................................................................................................................................................................CGCTTAGAGACAACGGTGGT................................	20	1	1.00	1	0	1	0	0	0
................................................................................................................................................................................................................................TAGAGCTCGCTTAGAGACAACGGTGGTG------T........................	29	1	1.00	1	0	0	1	0	0
........................................................................................................................................................................................................................AGGTATTTTAGAGCTCGCTTAGAG...........................................	24	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................TATTTTAGAGCTCGCTTAGAGACAACG.....................................	27	1	1.00	1	0	1	0	0	0
..........................................................................................................................................................................................................CGATCATGACTCCTAGGTATTTTAGAGCT....................................................	29	1	1.00	1	0	1	0	0	0
.........................................................................................................................................................................................AGTCA---GCCTTGTGTCGATCATGACTCC....................................................................	27	7	1.00	7	0	7	0	0	0
.....................................................................................................................................................................................................TGTGTCGATCATGACTCCTAGGTAT.............................................................	25	1	1.00	1	0	1	0	0	0
..............................................................................................................................................................................................................................................AGACAACGGTGGTG------TCGCCGACCC...............	24	1	1.00	1	0	0	0	1	0
.......................................................................................................................................................................................................TGTCGATCATGACTCCTAGGTATTTTA.........................................................	27	1	1.00	1	0	0	0	1	0
......................................................................................................................................................................................................................................TCGCTTAGAGACAACGGTGGTG------TCG......................	25	1	1.00	1	0	1	0	0	0
.....................................................................................................................................................................................................TGTGTCGATCATGACTCCTAGGTA..............................................................	24	1	1.00	1	0	0	0	1	0
..............................................................................................................................................................................................................CATGACTCCTAGGTATTTTAGAGCT....................................................	25	1	1.00	1	0	1	0	0	0
......................................................................................................................................................................................................................................TCGCTTAGAGACAACGGTGGTG------TCGCT....................	27	1	1.00	1	0	1	0	0	0
............................................................................................................................................................................................................ATCATGACTCCTAGGTATTTTAGAGC.....................................................	26	1	1.00	1	0	0	0	1	0
.............................................................................................................................................................................................A---GCCTTGTGTCGATCATGACTCCTAGG................................................................	27	2	1.00	2	0	2	0	0	0
.........................................................................................................................................................................................................TCGATCATGACTCCTAGGTATTTTAGA.......................................................	27	1	1.00	1	0	0	0	1	0
..........................................................................................................................................................................................................CGATCATGACTCCTAGGTATTTTAGAG......................................................	27	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................GATCATGACTCCTAGGTATTTTAGAGC.....................................................	27	1	1.00	1	0	1	0	0	0
........................................................................................................................................................................................................................AGGTATTTTAGAGCTCGCTTAGAGACA........................................	27	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................................................GAGCTCGCTTAGAGACAACGGTGGT................................	25	1	1.00	1	0	0	0	1	0
.......................................................................................................................................................................................................................................CGCTTAGAGACAACGGTGGTG------TCGCCGA..................	28	1	1.00	1	0	0	0	1	0
.......................................................................................................................................................................................................................................CGCTTAGAGACAACGGTGGTG------TCGCTA...................	27	1	1.00	1	0	1	0	0	0
....................................................................................................................................................................................................................TCCTAGGTATTTTAGAGCTCGCTTAGAG...........................................	28	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................TATTTTAGAGCTCGCTTAGAGACAACGG....................................	28	1	1.00	1	0	1	0	0	0
......................................................................................................................................................................................................................CTAGGTATTTTAGAGCTCGCTTAGAGA..........................................	27	1	1.00	1	0	1	0	0	0
..........................................................................................................................................................................................................CGATCATGACTCCTAGGTATTTTAGAGC.....................................................	28	1	1.00	1	0	1	0	0	0
.......................................................................................................................................................................................................................................................TGGTG------TCGCCGACCCTAATGGTGGCGGT..	28	1	1.00	1	0	1	0	0	0
....................................................................................................................................................................................................TTGTGTCGATCATGACTCCTAGGTATTT...........................................................	28	1	1.00	1	0	1	0	0	0
.......................................................................................................................................................................................................................TAGGTATTTTAGAGCTCGCTTAGAGT..........................................	26	1	1.00	1	0	0	0	1	0
................................................................................................................................................................................................................................TAGAGCTCGCTTAGAGACAACGGTGGTT------.........................	28	1	1.00	1	0	0	1	0	0
...........................................................................................................................................................................................................................................TAGAGACAACGGTGGTG------TCGC.....................	21	1	1.00	1	0	0	0	1	0
......................................................................................................................................................................................................................................TCGCTTAGAGACAACGGTGGTG------TCGT.....................	26	1	1.00	1	0	0	0	1	0
.......................................................................................................................................................................................................TGTCGATCATGACTCCTAGGTATTTT..........................................................	26	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................TAGAGACAACGGTGGTG------TCGCCGACCCT..............	28	1	1.00	1	0	0	0	1	0
................................................................................................................................................................................................................................TAGAGCTCGCTTAGAGACAACGGTGGC................................	27	1	1.00	1	0	1	0	0	0
................................................................................................................................................................................................................................................ACAACGGTGGTG------TCGCCGACCCTAATGG.........	28	1	1.00	1	0	0	0	1	0
................................................................................................................................................................................................................TGACTCCTAGGTATTTTAGAGCTCGC.................................................	26	1	1.00	1	0	0	0	1	0
.....................................................................................................................................................................................................................CCTAGGTATTTTAGAGCTCGCTT...............................................	23	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................TAGAGACAACGGTGGTG------TCGCCGACCT...............	27	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................................ACTCCTAGGTATTTTAGAGCTCGCT................................................	25	1	1.00	1	0	1	0	0	0
..............................................................................................................................................................................................................................................AGACAACGGTGGTG------TCGCCGACCCTAA............	27	1	1.00	1	0	1	0	0	0
...............................................................................................................................................................................................................................................GACAACGGTGGTG------TCGCCGACCCTAA............	26	1	1.00	1	0	1	0	0	0
.........................................................................................................................................................................................AGTCA---GCCTTGTGTCGATCATGACTC.....................................................................	26	7	1.00	7	1	6	0	0	0
........................................................................................................................................................................................................................................................GGTG------TCGCCGACCCTAATGGTGGCGG...	26	1	1.00	1	0	1	0	0	0
..........................................................................................................................................................................................................................................................TG------TCGCCGACCCTAATGGTGGCGGT..	25	1	1.00	1	0	1	0	0	0
.............................................................................................................................................................................................................................................GAGACAACGGTGGTG------TCGCCGACCC...............	25	1	1.00	1	0	1	0	0	0
.......................................................................................................................................................................................................................................CGCTTAGAGACAACGGTGG.................................	19	1	1.00	1	0	0	0	1	0
...................................................................................................................................................................................................................................AGCTCGCTTAGAGACAACGGTGGTG------.........................	25	1	1.00	1	0	1	0	0	0
.........................................................................................................................................................................................................................GGTATTTTAGAGCTCGCTTAGAGACA........................................	26	1	1.00	1	0	1	0	0	0
.......................................................................................................................................................................................................................TAGGTATTTTAGAGCTCGCTTAGA............................................	24	1	1.00	1	0	1	0	0	0
.......................................................................................................................................................................................................................TAGGTATTTTAGAGCTCGCTTAGAGACG........................................	28	1	1.00	1	0	1	0	0	0
..................................................................................................................................................................................................................................GAGCTCGCTTAGAGACAACGGTGG.................................	24	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................G------TCGCCGACCCTAATGGTGGCGGTC.	25	1	1.00	1	0	1	0	0	0
................................................................................................................................................................................................................................TAGAGCTCGCTTAGAGACAACGGTGTG................................	27	1	1.00	1	0	0	0	1	0
..........................................................................................................................................................................................................................................................TG------TCGCCGACCCTAATGGTGGCGGTC.	26	1	1.00	1	0	1	0	0	0
..........................................................................................................................................................................................................................................................TG------TCGCCGACCCTAATGGTGGCGG...	24	1	1.00	1	0	0	0	1	0
......................................................................................................................................................................................................................................TCGCTTAGAGACAACGGTGGTG------TCGC.....................	26	1	1.00	1	0	0	1	0	0
...........................................................................................................................................................................................................GATCATGACTCCTAGGTATTTTAGAG......................................................	26	1	1.00	1	0	1	0	0	0
.................................................................................................................................................................................................................................AGAGCTCGCTTAGAGACAACGGTGGT................................	26	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................TCTCTAAA----------------------AGTCA---GCCTTGTGTCGATCA...........................................................................	28	7	1.00	7	0	6	0	1	0
.............................................................................................................................................................TCTAAA----------------------AGTCA---GCCTTGTGTCGATC............................................................................	25	7	0.71	5	0	4	0	1	0
...........................................................................................................................................................................................TCA---GCCTTGTGTCGATCATGACT......................................................................	23	7	0.57	4	0	2	0	2	0
.................................................................................................................................................................................................GCCTTGTGTCGATCATGACTCCTAGG................................................................	26	2	0.50	1	0	1	0	0	0
......................................................................................................................................................................................................................................TCGCTTAGAGACAACGGTGGTG------TCGCTT...................	28	2	0.50	1	0	1	0	0	0
.........................................................................................................................................................GTTCTCTAAA----------------------AGTCA---GCCTTGTGTCG...............................................................................	26	2	0.50	1	0	1	0	0	0
..........................................................................................................................................................TTCTCTAAA----------------------AGTCA---GCCTTGTGTCGAT.............................................................................	27	2	0.50	1	0	1	0	0	0
...........................................................................................................................................................................................TCA---GCCTTGTGTCGATCATGACTCCTAG.................................................................	28	2	0.50	1	0	1	0	0	0
........................................................................................................................................................TGTTCTCTAAA----------------------AGTCA---GCCTTGTGTCG...............................................................................	27	2	0.50	1	0	1	0	0	0
........................................................................................................................................................TGTTCTCTAAA----------------------AGTCA---GCCTTGT...................................................................................	23	2	0.50	1	0	1	0	0	0
....................................................................................................................................................................................................TTGTGTCGATCATGACTCCTAGG................................................................	23	2	0.50	1	0	1	0	0	0
.........................................................................................................................................................GTTCTCTAAA----------------------AGTCA---GCCTTG....................................................................................	21	2	0.50	1	0	1	0	0	0
..........................................................................................................................................................TTCTCTAAA----------------------AGTCA---GCCTTG....................................................................................	20	2	0.50	1	0	1	0	0	0
...............................................................................................................................................................................................................................TTAGAGCTCGCTTAGAGACAACGG....................................	24	2	0.50	1	0	1	0	0	0
.........................................................................................................................................................GTTCTCTAAA----------------------AGTCA---GCCTTGTGTCGA..............................................................................	27	2	0.50	1	0	1	0	0	0
........................................................................................................................................................TGTTCTCTAAA----------------------AGTCA---GCCTT.....................................................................................	21	2	0.50	1	0	1	0	0	0
.................................................................................................................................................................................................GCCTTGTGTCGATCATGACTCCTAG.................................................................	25	2	0.50	1	0	1	0	0	0
..............................................................................................................................................................................................................................TTTAGAGCTCGCTTAGAGACAACGGTT..................................	27	2	0.50	1	0	0	0	1	0
...........................................................................................................................................................................................TCA---GCCTTGTGTCGATCATGACTCCTA..................................................................	27	2	0.50	1	0	1	0	0	0
..........................................................................................................................................................TTCTCTAAA----------------------AGTCA---GCCTTGTGTCGA..............................................................................	26	2	0.50	1	0	1	0	0	0
....................................................................................................................................................................................................TTGTGTCGATCATGACTCCTAGGT...............................................................	24	2	0.50	1	0	0	0	1	0
.......................................................................................................................................................................................................................................CGCTTAGAGACAACGGTGGTG------TCGCCT...................	27	2	0.50	1	0	1	0	0	0
................................................................................................................................................................................................................................TAGAGCTCGCTTAGAGACAACGG....................................	23	2	0.50	1	0	1	0	0	0
................................................................................................................................................................................................................................TAGAGCTCGCTTAGAGACAACGGT...................................	24	2	0.50	1	0	1	0	0	0
................................................................................................................................................................AAA----------------------AGTCA---GCCTTGTGTCGATCATG.........................................................................	25	7	0.43	3	0	2	0	1	0
.........................................................................................................................................................................................AGTCA---GCCTTGTGTCGATCATGA........................................................................	23	7	0.43	3	0	0	0	3	0
................................................................................................................................................................AAA----------------------AGTCA---GCCTTGTGTCGATCATGACT......................................................................	28	7	0.43	3	0	1	0	2	0
...............................................................................................................................................................TAAA----------------------AGTCA---GCCTTGTGTCGATCAT..........................................................................	25	7	0.29	2	0	2	0	0	0
...........................................................................................................................................................TCTCTAAA----------------------AGTCA---GCCTTGTGTCGAT.............................................................................	26	7	0.29	2	0	2	0	0	0
............................................................................................................................................................................................CA---GCCTTGTGTCGATCATGACTCC....................................................................	24	7	0.29	2	0	2	0	0	0
...........................................................................................................................................................................................TCA---GCCTTGTGTCGATCATGACTC.....................................................................	24	7	0.29	2	0	2	0	0	0
...........................................................................................................................................................................................TCA---GCCTTGTGTCGATCATGAC.......................................................................	22	7	0.29	2	0	2	0	0	0
..............................................................................................................................................................CTAAA----------------------AGTCA---GCCTTGTGTCGATCA...........................................................................	25	7	0.29	2	0	1	0	0	1
.........................................................................................................................................................................................AGTCA---GCCTTGTGTCGATCATGAC.......................................................................	24	7	0.29	2	0	1	0	1	0
..........................................................................................................................................................................................GTCA---GCCTTGTGTCGATCATGACTCC....................................................................	26	7	0.29	2	0	2	0	0	0
.................................................................................................................................................................AA----------------------AGTCA---GCCTTGTGTCGATCATGAC.......................................................................	26	7	0.14	1	0	1	0	0	0
...........................................................................................................................................................................................TCA---GCCTTGTGTCGATCATGA........................................................................	21	7	0.14	1	0	0	0	1	0
...............................................................................................................................................................TAAA----------------------AGTCA---GCCTTGTGTCGATCC...........................................................................	24	7	0.14	1	0	1	0	0	0
............................................................................................................................................................................................CA---GCCTTGTGTCGATCATGACT......................................................................	22	7	0.14	1	0	1	0	0	0
.............................................................................................................................................................................................A---GCCTTGTGTCGATCATGACTCC....................................................................	23	7	0.14	1	0	1	0	0	0
..............................................................................................................................................................CTAAA----------------------AGTCA---GCCTTGTGTCGATCATGA........................................................................	28	7	0.14	1	0	1	0	0	0
.................................................................................................................................................................AA----------------------AGTCA---GCCTTGTGTCGATCATGACT......................................................................	27	7	0.14	1	0	1	0	0	0
..........................................................................................................................................................................................GTCA---GCCTTGTGTCGATCATGACTC.....................................................................	25	7	0.14	1	0	1	0	0	0
............................................................................................................................................................CTCTAAA----------------------AGTCA---GCCTTGTGTCGATC............................................................................	26	7	0.14	1	0	1	0	0	0
................................................................................................................................................................AAA----------------------AGTCA---GCCTTGTGTCGATCA...........................................................................	23	7	0.14	1	0	1	0	0	0
.............................................................................................................................................................TCTAAA----------------------AGTCA---GCCTTGTGTCGA..............................................................................	23	7	0.14	1	0	1	0	0	0
....................................................................................................................................................................................................TTGTGTCGATCATGACTCC....................................................................	19	7	0.14	1	0	1	0	0	0
..................................................................................................................................................................A----------------------AGTCA---GCCTTGTGTCGATCATGAC.......................................................................	25	7	0.14	1	0	0	0	1	0
...........................................................................................................................................................TCTCTAAA----------------------AGTCA---GCCTTGTG..................................................................................	21	7	0.14	1	0	0	0	1	0
.............................................................................................................................................................TCTAAA----------------------AGTCA---GCCTTGTGTCGATCATG.........................................................................	28	7	0.14	1	0	1	0	0	0
.................................................................................................................................................................AA----------------------AGTCA---GCCTTGTGTCGATCATGA........................................................................	25	7	0.14	1	0	0	0	1	0
...............................................................................................................................................................TAAA----------------------AGTCA---GCCTTGTGTCGATCATT.........................................................................	26	7	0.14	1	0	1	0	0	0
...........................................................................................................................................................TCTCTAAA----------------------AGTCA---GCCTTGTGTCGATC............................................................................	27	7	0.14	1	0	0	0	1	0
.............................................................................................................................................................TCTAAA----------------------AGTCA---GCCTTGTGTCG...............................................................................	22	7	0.14	1	0	1	0	0	0
............................................................................................................................................................................................CA---GCCTTGTGTCGATCATGACTC.....................................................................	23	7	0.14	1	0	1	0	0	0
...............................................................................................................................................................TAAA----------------------AGTCA---GCCTTGTGTCGAT.............................................................................	22	7	0.14	1	0	1	0	0	0

dsi_24592

4:627025-627174 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-25.5	-25.4	-25.3