ID:

dsi_24591

 Coordinate:

3r:15767811-15767960 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.4 -2.5 -2.5

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTGACCAAAATCCAATCCAAATCCAAATCAAAATTCCAAATCAAATTCAAATTCAAATCGAAATCAATATCGAAATCGAAACCCAATTCATTTCGCCAGCAGAAGGAAGAAATCGAAATATATATCTCAAATCGCTCTTGCATATCCCCATTATCGTGCTCTCTCTCTCTCAATTTCAATTTCAATCTCGATCTC
**************************************************..............................................................((((..((......))..)))).............******************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
..............AAAATGAACAAACTAAACGCT....................................................................................................................................................................................................................... 21 0 1 4.00 4 3 1 0 0 0 0 0
...............AAATGAACAAACTAAACGCT....................................................................................................................................................................................................................... 20 0 1 3.00 3 1 2 0 0 0 0 0
.................ATGAACAAACTAAACGCT....................................................................................................................................................................................................................... 18 0 1 2.00 2 1 1 0 0 0 0 0
......CGATCCGGAAAATGAACA.................................................................................................................................................................................................................................. 18 0 1 2.00 2 0 2 0 0 0 0 0
................AATGAACAAACTAAACGCT....................................................................................................................................................................................................................... 19 0 1 2.00 2 0 2 0 0 0 0 0
................................................................................................................................................ATTTCGCAAGCAGAAGGAAG...................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0
........ATCCGGAAAATGAACAAACTAAACGCTC...................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0
......CGATCCGGAAAATGAACAAACTAAAC.......................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
..............AAAATGAACAAACTAAACGCC....................................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
..................TGAACAAACTAAACGCTCACATT................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0
........ATCCGGAAAATGAACAAACTAAACGC........................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0
...................................CACATTTCAGTTCCGGTGA.................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0
.GATTCCGATCCGGAAAATGAACAAACT.............................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0
........ATCCGGAAAATGAACAAACT.............................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0
........ATCCGGAAAATGAACAAACTAAACGCT....................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
..................................................GTAAGTTGACCAAAA......................................................................................................................................................................................... 15 0 1 1.00 1 0 0 0 1 0 0 0
...TTCCGATCCGGAAAATGAACAAACT.............................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0
............................AAACGCTCACATTTCAGTTCCGGC...................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 1 0 0
.............................................................................................................................CGAAATCGAAACCCAATTCATT....................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0
...........CGGAAAATGAACAAACTAAACGCT....................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
........ATCCGGAAAATGAACAAA................................................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0
......CGATCCGGAAAATGAACAAACT.............................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0
................................................................................................................................................................GAAGACATCGAAGTATATATT..................................................................... 21 3 6 0.17 1 0 0 0 0 0 1 0
...........................................................................................TAAATCAGATTCAAGTTCAAA.......................................................................................................................................... 21 3 19 0.05 1 0 0 0 0 0 0 1

Anti-sense strand reads

GCTAAGGCTAGGCCTTTTACTTGTTTGATTTGCGAGTGTAAAGTCAAGGCCATTCAACTGGTTTTAGGTTAGGTTTAGGTTTAGTTTTAAGGTTTAGTTTAAGTTTAAGTTTAGCTTTAGTTATAGCTTTAGCTTTGGGTTAAGTAAAGCGGTCGTCTTCCTTCTTTAGCTTTATATATAGAGTTTAGCGAGAACGTATAGGGGTAATAGCACGAGAGAGAGAGAGTTAAAGTTAAAGTTAGAGCTAGAG
*******************************************************************************************************..............................................................((((..((......))..)))).............************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
.........................................................................................................................................................AGTCTTCCTTCTTGAGCTCTAT........................................................................... 22 3 1 1.00 1 1 0 0
GCTACGTCTAGGCCTTTTA....................................................................................................................................................................................................................................... 19 2 3 0.33 1 0 1 0
.................................................................................................................................................................................................................GCAAGAGAGCGAGAGAGTTAA.................... 21 2 4 0.25 1 0 1 0
...........................................................................................................AGTTTAGCTTTAGTCCTAGGT.......................................................................................................................... 21 3 12 0.17 2 2 0 0
................................................................................................................................TTAGCTTTGGATTAAG.......................................................................................................... 16 1 10 0.10 1 0 1 0
....AGGCTAGGCCTTCTA....................................................................................................................................................................................................................................... 15 1 11 0.09 1 1 0 0
....................................................................................TTTAAAGGTTTAGTTT...................................................................................................................................................... 16 1 20 0.05 1 0 1 0
........................................................................................................TTAAGTTCCGCTTTTGTTATA............................................................................................................................. 21 3 20 0.05 1 0 0 1
...................................................................................GTTTAAAGGTTTAGTT....................................................................................................................................................... 16 1 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:15767761-15768010 - dsi_24591 CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC-------CAAA-T-CAA------------------------------------------AATTCCAA-AT---------------------C------------------------------------------AAAT---------------------------TCAAATTCAAATCGAA------------------------A-TCAATA-----TCG-AAATCGAAACCCA--------------------ATTCATTTC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAAA-TCGAAATATAT-------------A-------TCTCAAATCGCTCTTGCATATCCC-----CATTATCGTGCTCTCT-C--TCTCTCAATT--TCAAT----TTCAATCTC-GATCTC
droSec2 scaffold_0:16636972-16637223 - CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC-------CAAA-T-CAA------------------------------------------AATTCCAA-AT---------------------C------------------------------------------AAAT---------------------------TCAAATTCAAATCGAA------------------------A-TCAATA-----TCG-AAATCGAAACCCA--------------------ATTCATTTC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAAA-TCGAAATATAT-------------A-------TCTCAAATCGCTCTTGCATATCCC-----CATTATCGTGCTCTCT-C--TCAATTTCAATTTCAAT----TTCAATCTC-GATCTC
dm3 chr3R:5258512-5258763 + CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC-------CAAA-T-CAA------------------------------------------AATTCAAA-AT---------------------C------------------------------------------AAAT---------------------------TCAAATTCAAATCGAA------------------------A-TCAATA-----TCG-AAATCGAAACTCA--------------------ATTCATTTC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAAA-TTGAAATATAT-------------A-------TCTCAAATCGCTCTTGCATATCCC-----CATTATCGTGCTCTCT-C--TTTTTCTCTCTGTCAAT----CTCAATCTC-GATCTC
droEre2 scaffold_4770:16344891-16345129 - CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC-------CAAA-T-CAA------------------------------------------AATTCCAA-AACAAA-ATT-------------C------------------------------------------AAAT---------------------------TCAAATTCAAA------------------------------------------TCG-AAATCGAATCCCA--------------------ATTCATTTC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAAA-TCGAAATATGT-------------A-------TCTCAAATCGCTCTTGCATATCCC-----CATTATCGTGCTCTCT-C--TCTCTCTCTCTTTCTA------------TC-AATCTC
droYak3 3R:9305916-9306168 + CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC-------CAAA-T-CAA------------------------------------------AATTCCAA-ATCAAA-ATTCCAAAC-------C------AA-----------------AATTCCAAACCA-----AAAT---------------------------TCAAATTCAAA------------------------------------------TCG-AAATCGAATCAAA--------------------ATTCATTTC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAAA-TCGAAATATAT-------------A-------TCTCAAATCGCTCTTGCATATCCC-----CATTATCGTGCTCTCT-C--TCTATCTCTCTCTC-------------------TATC
droEug1 scf7180000407136:440734-441013 - CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA-AATCCAAATC-------CAAAATCCAA------------------------------------------AATTCCAATATCAAAAATTCCAAAAAAACAATCAAAATTAGA--------------------------------------------------------AAAATCAA----------------AAGAATT------CAATTTCCAAAT-TCAAAA-----TCA-AAATCGAATCCCA------A-----------AAATTCATT-CAAAG--C-------------------------------------------------------CAGCA---------GA---A--------GGAA------------------------------A-------TCTCAAATCGCTCTTCCATATCCC-----CATTATCGTGCTCTCT-C--CTCCTCTCTCTCTCTAT----CT--ATCTC-TCTCTC
droBia1 scf7180000302402:7994798-7995036 + CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC---------------GA------A------------------------TTCCAAATCAAAATTCCAA-AT---------------------C------AATATCGATATCCGAA---------------------------------------------------TCAAGTTCAAA------------------------------------------TCAAAAATCAACCCCCA--------------------ATTCATTCC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAAAG-AAACCGAAAAC--G-------------A-------TCTCAAATCGCTCTTGCATATCCC-----CATTATCGTGCTCTCT-C--TC-CTC----------------------TC-AATCTC
droTak1 scf7180000415811:282640-282899 - CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC-------CAAA-T-CAA------TA------------TCCAAATCAAATTCCAAATCAA----------------GTT-------------------------------CCGAATCAAATTTCGAATC------AAAT---------------------------TCAAATTCAAA------------------------------------------TCA-AAATCGAATCCCA--------------------ATTCATTCC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAAGG-AAACTGAAAAA--T-------------A-------TCTCAAATCGCTCTTCCATATCCC-----CATTATCGTGCTCTCTCC--TCT-ACTCTCCT-------------------TATCTC
droEle1 scf7180000491194:429905-430155 + CGATTCCGATCCGGAAAATGAACAAACAAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC---------------AA------AT------------TCCAAATCAAATTTCAAATCAA----------------ATT-------------------------------CCGAATCAAATTCCAAATC------AAAT---------------------------TCAAATTCAAA------------------------------------------TCA-ATATCGAATCCCA--------------------ATTCATTTC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAAAACGGAAAA---T-------------A-------TCTC-AATCGCTCTTGCATATCCC-----CATTATCGTGCTCTCT-C--TCTCCCTTACTCTGTA-------------------T-
droRho1 scf7180000779488:477470-477743 + TGATTCCGATCCGGAAAATGAACAAACAAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC-------CGAA-T-AAA------AT------------TCCAAATCGAATTCCAAATCAA----------------ATT-------------------------------CCAAATCGAATTCCAAATC------AAAT---------------------------TCAAATTCAAACCCAA------------------------A------------TCA-ATATCGAACCCCA--------------------ATTCATTCC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GGAAACGGAAAA---T-------------A-------TCTC-AATCGCTCTTGCATATCCC-----CATTATCGTGCTCTCT-C--TCTCTCTCTCTCTCC-T----CT--A-CTCTACTCT-
droFic1 scf7180000454106:1931077-1931366 - CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC-------CAAA-T-CAAAATCAAATTCCAAATCAGATTCCAAATCAAATTTCAAATCGA----------------ATT-------------------------------CCAAATCAAGTTCCGAATCAAATTCAAAT---------------------------TCAAATTCAAATCCAA------------------------ATTCAATACCAAATCGAAAATCGAATCCCA--------------------ATTCATTCC---G--T-------------------------------------------------------CAGCA---------AA---A--------GGAAAG-AAACGGAAAA---T-------------A-------TCTCAAATCGCTATTGCATATCCC-----CATTATCGTGCTC-CT-CTCTA--------------------------------CTC
droKik1 scf7180000302388:1826627-1826880 - CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAA----ATCAA--ATCA--ATCCA-----AAAA-T-CAA------------------------------------------AATCCAAA-TT---------------------------------------CAGAAT-----------------------ACAAAAAAAAAAAAAAAAAAATAGTAA----------------AAGAATT------CA-------------------------------TAATCCAA--------------------ATTCATTTC---G--A-------------------------------------------------------AAGCA---------GT---TAAAAAATTGGA--G-TAACAGTT---------TAAGAAGAATA------TTGTC-AATCGCTCTTGCATTTACCATTA----TATCGCGCTCTTC-C--TCTCTGTCTT--CCTA-----------------TCT-
droAna3 scaffold_13340:4789850-4790099 - CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTC-------------------------AAACCAAA---ATCCA--A----AATCC------AAAA-T-CGA------------------------------------------AAATCCAA-AA---A-ATC-C----------TCAAAATCAGT------------------------------------------------------------------------AAATCAGA------------------------A-AAATT-----------------ATCCCA------AAAAAAAAAAAAAAATTCATTTC---A--A-------------------------------------------------------AAGCA---------GA---A-------------G-AAACAGAAAA---T-------------A-------TTTC-AATCGCTCTTGCATATCC------CATTATCGTGCTCTCT-C--TTTCTCTCTA--TCTATCTCTCTCTCTCTC-TATCTC
droBip1 scf7180000396359:400222-400450 + CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAAAAAATCCAAAATCCAAAA-----ATCAGTA-T-CAG------------------------------------------TATCCA----------------------------------------------GTAT---------------------------------------------------C----------CAGT------------------------A-TCAGTA-----TC---AATCGTATCCCAATCCCCA-----------AGATTCATTTCAAAA--A-------------------------------------------------------AAGCA---------GA---A-------------G-ATACAGAAAA---T-------------A-------TTTC-AATCGCTCTTGCATATCCC-----CATTATCGTGCTCTCT-C--TCTCTCTCTA---------------------TATATA
dp5 2:3160563-3160776 - dps_325 CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ATCAAA---ATCCA-AATCCAATTC--AT--------------------------------------------------------------------------------------------------------------------------------------ACAAAAAAAAAAAAAAGAAAGAAAGAA----------------AAGAAAGAAAGAACA--GA--------------------------------CCA-----------------GAA--------------------------------------------------------------------AA------------TCAGA---A------ATGAAAAG-AAACAGAAAA---T-------------A-------TTTC-AATCGCTCTTGCATATTC------CATTATCGTGCTCTCT-A--TCTCTCTCTC---------------------TCTCTC
droPer2 scaffold_7:1181299-1181524 + CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ATCAAA---ATCCA-AATCCAATTC--AT--------------------------------------------------------------------------------------------------------------------------------------ACAAAAAAAAAA---AGAAAGAAAGAA----------------AAGAAAGAAAGAACA--GA--------------------------------CCA------A----------GAA--------------------------------------------------------------------AA------------TCAGA---A------ATGAAAAG-AAACAGAAAA---T-------------A-------TTTC-AATCGCTCTTGCATATTC------CATTATCGTGCTCTCT-A--TCTCTCTCTCTCTCTAT----CT--ACCTC-TCTCTC
droWil2 scf2_1100000004902:9742366-9742629 - CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTTTCAAAAAAAAAAAAAAAAAAACAAAAAACCAAAGAAATTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCCAAATCGAAAAAAAAGAGAAA-------------------------CCA-TAATCAAATCCCA------A----------GAAATTCATGTC---ATAC-------------------------------------------------------A---A---------GA---A--------GTAA-A-AAACAGAAAA---TGTTATAGTAAAATAATTTCAATTTC-AATCGCTCTTGCATATGC------CATTATCGTGCTCTCT-C--TCTCTCTCTATTTC--T----CT----CTC-TCTCT-
droVir3 scaffold_13047:676957-677176 + dvi_14927 CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTT---------------------------TGCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTTCAAAA---AAAAAAAAAA-AAAACAAAAAAA----AAAAACAGAAAAA--CAAAAAAAAAAACC---AA---AGTACAT---A------ATG-A---------GGAATAAG-----------TA-------AATTTC-AATCGCTTTTACATATACTACTATCATAATCGTGCTCTTT-G--TCTCTATCTA--ACTAT----CT----ATC-TATCTC
droMoj3 scaffold_6540:4666395-4666625 + CGATTCAGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTT---------------------------TGCAA------------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGAAAA---ACAAAAAAACAAAATCGAAAAAAATATAAAAACAAAAAACCCCAAAACAAAAATCC---AA--AAGTACGA---A------ATG----------TGAAATAAG-----------CA-------AATTTC-AATCGCTTTTACATATACTACTATCATTATCGTGCTCCTT-G--TCTCTAACTA--TCAAT----CTATCTATC-GAACT-
droGri2 scaffold_14906:5651823-5651994 - CGATTCCGATCCGGAAAATGAACAAACAAAACGCTCACATTTCAGTTCCGGTAAGTTT---------------------------TGCAA----ATCAA--ATCCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTTG---A--A------------------------------------------------------CC---AAATAAGTACCACATA------ATG-A---------GCAATGAG-----------CA-------AATTTC-AATCGCTTTTACATATACTACTATCATTATCGTGCTCTCT-C--TATCTCT---------------------------CTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC-------CAAA-T-CAA------------------------------------------AATTCCAA-AT---------------------C------------------------------------------AAAT---------------------------TCAAATTCAAATCGAA------------------------A-TCAATA-----TCG-AAATCGAAACCCA--------------------ATTCATTTC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAAA-TCGAAATATAT-------------A-------TCTCAAATCGCTCTTGCATATCCC-----CATTATCGTGCTCTCT-C--TCTCTCAATT--TCAAT----TTCAATCTC-GATCTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............AAAATGAACAAACTAAACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.00403100000000000000
...............AAATGAACAAACTAAACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00301200000000000000
.................ATGAACAAACTAAACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00201100000000000000
......CGATCCGGAAAATGAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
................AATGAACAAACTAAACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200000000000000
........ATCCGGAAAATGAACAAACTAAACGCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
......CGATCCGGAAAATGAACAAACTAAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
..............AAAATGAACAAACTAAACGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
..................TGAACAAACTAAACGCTCACATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
........ATCCGGAAAATGAACAAACTAAACGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
.GATTCCGATCCGGAAAATGAACAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
........ATCCGGAAAATGAACAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
........ATCCGGAAAATGAACAAACTAAACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
..................................................GTAAGTTG---------------------------ACCAAA---A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000001000000000
...TTCCGATCCGGAAAATGAACAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
............................AAACGCTCACATTTCAGTTCCGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000001000
.........................................................................................................................................................................................................................................................................................................................................CG-AAATCGAAACCCA--------------------ATTCATT............................................................................................................................................................................................................................2211.00100010000000000000
...........CGGAAAATGAACAAACTAAACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
........ATCCGGAAAATGAACAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
......CGATCCGGAAAATGAACAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
droSec2
CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC-------CAAA-T-CAA------------------------------------------AATTCCAA-AT---------------------C------------------------------------------AAAT---------------------------TCAAATTCAAATCGAA------------------------A-TCAATA-----TCG-AAATCGAAACCCA--------------------ATTCATTTC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAAA-TCGAAATATAT-------------A-------TCTCAAATCGCTCTTGCATATCCC-----CATTATCGTGCTCTCT-C--TCAATTTCAATTTCAAT----TTCAATCTC-GATCTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................ACAAACTAAACGCTCACATTTCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
dm3
CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC-------CAAA-T-CAA------------------------------------------AATTCAAA-AT---------------------C------------------------------------------AAAT---------------------------TCAAATTCAAATCGAA------------------------A-TCAATA-----TCG-AAATCGAAACTCA--------------------ATTCATTTC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAAA-TTGAAATATAT-------------A-------TCTCAAATCGCTCTTGCATATCCC-----CATTATCGTGCTCTCT-C--TTTTTCTCTCTGTCAAT----CTCAATCTC-GATCTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................C---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAAA-TTGAA.................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCCGATCCGGAAAATGAACAAACTAAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ACGCTCACATTTCAGTTCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAAA-TTGAA.................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCCGGAAAATGAACAAACTAAACGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCCGATCCGGAAAATGAACAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CGATCCGGAAAATGAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............AAATGAACAAACTAAACGCTCACATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GCTCACATTTCAGTTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
..ATTCCGATCCGGAAAATGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCT-C--TTTTTCTCTCTGTCAAT----................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TTC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAAA-TTGAAA................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...TTCCGATCCGGAAAATGAACAAACTAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..............................ACGCTCACATTTCAGTTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCCGATCCGGAAAATGAACAAACTAAACGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GATTCCGATCCGGAAAATGAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCCGGAAAATGAACAAACTAAACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CATTTC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GA.........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---------GA---A--------GGAA-GAAA-TTGA..................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTGCATATCCC-----CATTATCGTGCT.............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GATTCCGATCCGGAAAATGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCT-C--TTTTTCTCTCTGTC.......................1920.5010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCT-C--TTTTTCTCTCTGTCT......................2170.1410000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CACATTTCAGTTCCGGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC-------CAAA-T-CAA------------------------------------------AATTCCAA-AACAAA-ATT-------------C------------------------------------------AAAT---------------------------TCAAATTCAAA------------------------------------------TCG-AAATCGAATCCCA--------------------ATTCATTTC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAAA-TCGAAATATGT-------------A-------TCTCAAATCGCTCTTGCATATCCC-----CATTATCGTGCTCTCT-C--TCTCTCTCTCTTTCTA------------TC-AATCTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAAA-T.....................................................................................................................1911.0010000010
..ATTCCGATCCGGAAAATGAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................C---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAAA-T.....................................................................................................................2011.0010000100
...............AAATGAACAAACTAAACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................TTC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-G..........................................................................................................................1811.0010000010
........ATCCGGAAAATGAACAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCCC-----CATTATCGTGCTCC...........................................2111.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCCC-----CATTATCGTGCTCTC..........................................2211.0010000010
.....................ACAAACTAAACGCTCACAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.....CCGATCCGGAAAATGAACAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
........................AACTAAACGCTCACATTTCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-------------A-------TCTCAAATCGCTCTTGCAT...................................................................2211.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................C---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAAA-TCGAA.................................................................................................................2411.0010000010
...................................CACATTTCAGTTCCGGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.2510000010
droYak3
CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC-------CAAA-T-CAA------------------------------------------AATTCCAA-ATCAAA-ATTCCAAAC-------C------AA-----------------AATTCCAAACCA-----AAAT---------------------------TCAAATTCAAA------------------------------------------TCG-AAATCGAATCAAA--------------------ATTCATTTC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAAA-TCGAAATATAT-------------A-------TCTCAAATCGCTCTTGCATATCCC-----CATTATCGTGCTCTCT-C--TCTATCTCTCTCTC-------------------TATCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............AAATGAACAAACTAAACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00202000000000
...............AAATGAACAAACTAAACGCTCACATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
......CGATCCGGAAAATGAACAAACTAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000
...................................................................................................................................................................................................................................................................................................................................................ATCAAA--------------------ATTCATTTC---G--C-------------------------------------------------------CAGCA---------GA---A--------................................................................................................................................2511.00101000000000
.................ATGAACAAACTAAACGCTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................TC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAA........................................................................................................................1911.00100000010000
............................................GTTCCGGTAAGTTG---------------------------ACCAAA---..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................TC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAAA-TCGAA.................................................................................................................2511.00101000000000
................AATGAACAAACTAAACGCTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
droEug1
CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA-AATCCAAATC-------CAAAATCCAA------------------------------------------AATTCCAATATCAAAAATTCCAAAAAAACAATCAAAATTAGA--------------------------------------------------------AAAATCAA----------------AAGAATT------CAATTTCCAAAT-TCAAAA-----TCA-AAATCGAATCCCA------A-----------AAATTCATT-CAAAG--C-------------------------------------------------------CAGCA---------GA---A--------GGAA------------------------------A-------TCTCAAATCGCTCTTCCATATCCC-----CATTATCGTGCTCTCT-C--CTCCTCTCTCTCTCTAT----CT--ATCTC-TCTCTCSizeHit CountTotal NormTotal
No Reads
droBia1
CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC---------------GA------A------------------------TTCCAAATCAAAATTCCAA-AT---------------------C------AATATCGATATCCGAA---------------------------------------------------TCAAGTTCAAA------------------------------------------TCAAAAATCAACCCCCA--------------------ATTCATTCC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAAAG-AAACCGAAAAC--G-------------A-------TCTCAAATCGCTCTTGCATATCCC-----CATTATCGTGCTCTCT-C--TC-CTC----------------------TC-AATCTCSizeHit CountTotal NormTotal
No Reads
droTak1
CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC-------CAAA-T-CAA------TA------------TCCAAATCAAATTCCAAATCAA----------------GTT-------------------------------CCGAATCAAATTTCGAATC------AAAT---------------------------TCAAATTCAAA------------------------------------------TCA-AAATCGAATCCCA--------------------ATTCATTCC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAAGG-AAACTGAAAAA--T-------------A-------TCTCAAATCGCTCTTCCATATCCC-----CATTATCGTGCTCTCTCC--TCT-ACTCTCCT-------------------TATCTCSizeHit CountTotal NormTotal
No Reads
droEle1
CGATTCCGATCCGGAAAATGAACAAACAAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC---------------AA------AT------------TCCAAATCAAATTTCAAATCAA----------------ATT-------------------------------CCGAATCAAATTCCAAATC------AAAT---------------------------TCAAATTCAAA------------------------------------------TCA-ATATCGAATCCCA--------------------ATTCATTTC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GAAAACGGAAAA---T-------------A-------TCTC-AATCGCTCTTGCATATCCC-----CATTATCGTGCTCTCT-C--TCTCCCTTACTCTGTA-------------------T-SizeHit CountTotal NormTotal
No Reads
droRho1
TGATTCCGATCCGGAAAATGAACAAACAAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC-------CGAA-T-AAA------AT------------TCCAAATCGAATTCCAAATCAA----------------ATT-------------------------------CCAAATCGAATTCCAAATC------AAAT---------------------------TCAAATTCAAACCCAA------------------------A------------TCA-ATATCGAACCCCA--------------------ATTCATTCC---G--C-------------------------------------------------------CAGCA---------GA---A--------GGAA-GGAAACGGAAAA---T-------------A-------TCTC-AATCGCTCTTGCATATCCC-----CATTATCGTGCTCTCT-C--TCTCTCTCTCTCTCC-T----CT--A-CTCTACTCT-SizeHit CountTotal NormTotal
No Reads
droFic1
CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAA---ATCCA--ATCCAAATC-------CAAA-T-CAAAATCAAATTCCAAATCAGATTCCAAATCAAATTTCAAATCGA----------------ATT-------------------------------CCAAATCAAGTTCCGAATCAAATTCAAAT---------------------------TCAAATTCAAATCCAA------------------------ATTCAATACCAAATCGAAAATCGAATCCCA--------------------ATTCATTCC---G--T-------------------------------------------------------CAGCA---------AA---A--------GGAAAG-AAACGGAAAA---T-------------A-------TCTCAAATCGCTATTGCATATCCC-----CATTATCGTGCTC-CT-CTCTA--------------------------------CTCSizeHit CountTotal NormTotal
No Reads
droKik1
CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAA----ATCAA--ATCA--ATCCA-----AAAA-T-CAA------------------------------------------AATCCAAA-TT---------------------------------------CAGAAT-----------------------ACAAAAAAAAAAAAAAAAAAATAGTAA----------------AAGAATT------CA-------------------------------TAATCCAA--------------------ATTCATTTC---G--A-------------------------------------------------------AAGCA---------GT---TAAAAAATTGGA--G-TAACAGTT---------TAAGAAGAATA------TTGTC-AATCGCTCTTGCATTTACCATTA----TATCGCGCTCTTC-C--TCTCTGTCTT--CCTA-----------------TCT-SizeHit CountTotal NormTotal
No Reads
droAna3
CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTC-------------------------AAACCAAA---ATCCA--A----AATCC------AAAA-T-CGA------------------------------------------AAATCCAA-AA---A-ATC-C----------TCAAAATCAGT------------------------------------------------------------------------AAATCAGA------------------------A-AAATT-----------------ATCCCA------AAAAAAAAAAAAAAATTCATTTC---A--A-------------------------------------------------------AAGCA---------GA---A-------------G-AAACAGAAAA---T-------------A-------TTTC-AATCGCTCTTGCATATCC------CATTATCGTGCTCTCT-C--TTTCTCTCTA--TCTATCTCTCTCTCTCTC-TATCTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................TGAACAAACTAAACGCTCACATTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.................................................................................................................................................................................................................GT------------------------------------------------------------------------AAATCAGA------------------------A-AAATT-----------------ATCCC........................................................................................................................................................................................................................................................2111.001010000
................................GCTCACATTTCAGTTCCGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGAAAA---T-------------A-------TTTC-AATCGCTCTTG......................................................................2611.001010000
.......................................................TTC-------------------------AAACCAAA---ATCCA--A----AATCC------AAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
...................GAACAAACTAAACGCTCACATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
droBip1
CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ACCAAAAAAATCCAAAATCCAAAA-----ATCAGTA-T-CAG------------------------------------------TATCCA----------------------------------------------GTAT---------------------------------------------------C----------CAGT------------------------A-TCAGTA-----TC---AATCGTATCCCAATCCCCA-----------AGATTCATTTCAAAA--A-------------------------------------------------------AAGCA---------GA---A-------------G-ATACAGAAAA---T-------------A-------TTTC-AATCGCTCTTGCATATCCC-----CATTATCGTGCTCTCT-C--TCTCTCTCTA---------------------TATATASizeHit CountTotal NormTotal
No Reads
dp5
CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ATCAAA---ATCCA-AATCCAATTC--AT--------------------------------------------------------------------------------------------------------------------------------------ACAAAAAAAAAAAAAAGAAAGAAAGAA----------------AAGAAAGAAAGAACA--GA--------------------------------CCA-----------------GAA--------------------------------------------------------------------AA------------TCAGA---A------ATGAAAAG-AAACAGAAAA---T-------------A-------TTTC-AATCGCTCTTGCATATTC------CATTATCGTGCTCTCT-A--TCTCTCTCTC---------------------TCTCTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................ACGCTCACATTTCAGTTCCGGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020100001000
................................GCTCACATTTCAGTTCCGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
............GGAAAATGAACAAACTAAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.GATTCCGATCCGGAAAATGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.............................AACGCTCACATTTCAGTTCCGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.......GATCCGGAAAATGAACAAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................AAACGCTCACATTTCAGTTCCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
............................AAACGCTCACATTTCAGTTCCGGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.....CCGATCCGGAAAATGAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...............................CGCTCACATTTCAGTTCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...............AAATGAACAAACTAAACGCTCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
........................AACTAAACGCTCACATTTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........................ACTAAACGCTCACATTTCAGTTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
......................CAAACTAAACGCTCACATTTCAGTTCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
.GATTCCGATCCGGAAAATGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................AAACGCTCACATTTCAGTTCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...............................CGCTCACATTTCAGTTCCGGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
droPer2
CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTG---------------------------ATCAAA---ATCCA-AATCCAATTC--AT--------------------------------------------------------------------------------------------------------------------------------------ACAAAAAAAAAA---AGAAAGAAAGAA----------------AAGAAAGAAAGAACA--GA--------------------------------CCA------A----------GAA--------------------------------------------------------------------AA------------TCAGA---A------ATGAAAAG-AAACAGAAAA---T-------------A-------TTTC-AATCGCTCTTGCATATTC------CATTATCGTGCTCTCT-A--TCTCTCTCTCTCTCTAT----CT--ACCTC-TCTCTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................CGCTCACATTTCAGTTCCGGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2216.006600000
..................................TCACATTTCAGTTCCGGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.503300000
..ATTCCGATCCGGAAAATGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..............................ACGCTCACATTTCAGTTCCGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
................................GCTCACATTTCAGTTCCGGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.GATTCCGATCCGGAAAATGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...............AAATGAACAAACTAAACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...............................CGCTCACATTTCAGTTCCGGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2321.002200000
..............................ACGCTCACATTTCAGTTCCGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..ATTCCGATCCGGAAAATGAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
................AATGAACAAACTAAACGCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...........................TAAACGCTCACATTTCAGTTCCGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
...................................CACATTTCAGTTCCGGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.804400000
droWil2
CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTTTCAAAAAAAAAAAAAAAAAAACAAAAAACCAAAGAAATTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCCAAATCGAAAAAAAAGAGAAA-------------------------CCA-TAATCAAATCCCA------A----------GAAATTCATGTC---ATAC-------------------------------------------------------A---A---------GA---A--------GTAA-A-AAACAGAAAA---TGTTATAGTAAAATAATTTCAATTTC-AATCGCTCTTGCATATGC------CATTATCGTGCTCTCT-C--TCTCTCTCTATTTC--T----CT----CTC-TCTCT-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........TCCGGAAAATGAACAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000
................AATGAACAAACTAAACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000
.........TCCGGAAAATGAACAAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
...................................CACATTTCAGTTCCGGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
...................GAACAAACTAAACGCTCACATTTCAGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
...................GAACAAACTAAACGCTCACATTTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
CGATTCCGATCCGGAAAATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
................AATGAACAAACTAAACGCTCACATTTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
.....CCGATCCGGAAAATGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
...................GAACAAACTAAACGCTCACATTTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
........................AACTAAACGCTCACATTTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
..............AAAATGAACAAACTAAACGCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.....................................CATTTCAGTTCCGGTAAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
.......................AAACTAAACGCTCACATTTCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
...............AAATGAACAAACTAAACGCTCACATTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
..........CCGGAAAATGAACAAACTAAACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAA-A-AAACAGAAAA---TGT.........................................................................................................1811.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---TGTTATAGTAAAATAATTTCAA......................................................................................2411.00100010
.....CCGATCCGGAAAATGAACAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
......................CAAACTAAACGCTCACATTTCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
droVir3
CGATTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTT---------------------------TGCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTTCAAAA---AAAAAAAAAA-AAAACAAAAAAA----AAAAACAGAAAAA--CAAAAAAAAAAACC---AA---AGTACAT---A------ATG-A---------GGAATAAG-----------TA-------AATTTC-AATCGCTTTTACATATACTACTATCATAATCGTGCTCTTT-G--TCTCTATCTA--ACTAT----CT----ATC-TATCTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................AACGCTCACATTTCAGTTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000002000000000000000000000000000000000000000000000
.GATTCCGATCCGGAAAATGAACAAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
................................GCTCACATTTCAGTTCCGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..ATTCCGATCCGGAAAATGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
...............AAATGAACAAACTAAACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
.........................ACTAAACGCTCACATTTCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................ATGAACAAACTAAACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
...............AAATGAACAAACTAAACGCTCACATTTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.................ATGAACAAACTAAACGCTCACATTTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000001000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACTATCATAATCGTGCTC............................................2111.001000000000000000000000000000000000000000000000000000000000000100
...............AAATGAACAAACTAAACGCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.GATTCCGATCCGGAAAATGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
...TTCCGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................4411.001000000000000000000000000000000000000000000000000000000000100000
...................GAACAAACTAAACGCTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...........................TAAACGCTCACATTTCAGTTCCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...............AAATGAACAAACTAAACGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.GATTCCGATCCGGAAAATGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000100000000000000000000000000000000
........ATCCGGAAAATGAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.001000000000000000000000000000000000000000000000000000000010000000
..ATTCCGATCCGGAAAATGAACAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000000000000000000000000000000000000000000000000000000000000
......CGATCCGGAAAATGAACAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAA-AAAACAAAAAAA----AAAA....................................................................................................................................................................................23200.102002000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AAAAAA-AAAACAAAAAAA----AAAAA...................................................................................................................................................................................23200.102000100000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TTTCAAAA---AAAAAAAAAA-AA......................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAA-AAAACAAAAAAA----AAAA....................................................................................................................................................................................26200.051000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................AA-AAAACAAAAAAA----AAAAACA.................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AAAAAA-AAAACAAAAAAA----AAA.....................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAA-AAAACAAAAAAA----A.......................................................................................................................................................................................22200.051000000000000000000000000000000000000000000000000000000000000001
droMoj3
CGATTCAGATCCGGAAAATGAACAAACTAAACGCTCACATTTCAGTTCCGGTAAGTTT---------------------------TGCAA------------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGAAAA---ACAAAAAAACAAAATCGAAAAAAATATAAAAACAAAAAACCCCAAAACAAAAATCC---AA--AAGTACGA---A------ATG----------TGAAATAAG-----------CA-------AATTTC-AATCGCTTTTACATATACTACTATCATTATCGTGCTCCTT-G--TCTCTAACTA--TCAAT----CTATCTATC-GAACT-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................CAAACTAAACGCTCACATTTCAGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
........................AACTAAACGCTCACATTTCAGTTCCGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
droGri2
CGATTCCGATCCGGAAAATGAACAAACAAAACGCTCACATTTCAGTTCCGGTAAGTTT---------------------------TGCAA----ATCAA--ATCCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTTG---A--A------------------------------------------------------CC---AAATAAGTACCACATA------ATG-A---------GCAATGAG-----------CA-------AATTTC-AATCGCTTTTACATATACTACTATCATTATCGTGCTCTCT-C--TATCTCT---------------------------CTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....CCGATCCGGAAAATGAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110

Generated: 05/18/2015 at 06:35 PM