ID:dsi_24581 |
Coordinate:3r:10387551-10387700 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
intergenic
No Repeatable elements found
|
TTTAACTGCTATGTTTTATAAAAACATTTCAATATATGTTATGATTATGATGATATGATATATGATTATTAATTGTTTAACTATAAATAAAATCTGTGATGTGTGTAAAGAAATATAAAATAGTTTTTGTCGGAATCTAAGGTATTTAGAGTCCAAAAATATCATCGCGGTAAGCACTACATTCTTCATTTTCTGTGTAGCAAAAGAGATGGTATATGAGACGTGGGAACTGCTAGGAACTATGAGCTGG
**************************************************.....(((((......))))).(((((((....)))))))...((((((((.((((........((((((....)))))).(((.(((((.....))))).)))....))))))))))))......((((((............))))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553488 RT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
SRR902009 testis |
SRR553486 Makindu_3 day-old ovaries |
O002 Head |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................ATATATATGATGATAATGATGATATG................................................................................................................................................................................................. | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................................................................................................................................................TGTAGCAACAAAGATGGTCTAT................................. | 22 | 3 | 3 | 0.33 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..............................................ATGATGATATGATATA............................................................................................................................................................................................ | 16 | 0 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...................................................................................................................................................................................................................................AATTGCTAGGAACTCTAAGC... | 20 | 3 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...................................................................................................................................................................................................TGTAGCAACAAAGATGGTA.................................... | 19 | 2 | 5 | 0.20 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..............................................................................AACTTTGAATAAAGTCTGTGA....................................................................................................................................................... | 21 | 3 | 7 | 0.14 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ..............................................................................................................................TTTTCGGAACATAAGGTATT........................................................................................................ | 20 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ......................................TTATGATTATGAGGA..................................................................................................................................................................................................... | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
|
AAATTGACGATACAAAATATTTTTGTAAAGTTATATACAATACTAATACTACTATACTATATACTAATAATTAACAAATTGATATTTATTTTAGACACTACACACATTTCTTTATATTTTATCAAAAACAGCCTTAGATTCCATAAATCTCAGGTTTTTATAGTAGCGCCATTCGTGATGTAAGAAGTAAAAGACACATCGTTTTCTCTACCATATACTCTGCACCCTTGACGATCCTTGATACTCGACC
**************************************************.....(((((......))))).(((((((....)))))))...((((((((.((((........((((((....)))))).(((.(((((.....))))).)))....))))))))))))......((((((............))))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M024 male body |
SRR553486 Makindu_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................TAGATTCCATAGATCTCAAGTTG............................................................................................. | 23 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .AATTGATGATACAAAATG....................................................................................................................................................................................................................................... | 18 | 2 | 7 | 0.14 | 1 | 0 | 1 | 0 |
| ...................................................................................................ACACACACTTCTTTATTTTT................................................................................................................................... | 20 | 2 | 8 | 0.13 | 1 | 0 | 1 | 0 |
| .AATTGATGATACAAAATGAT..................................................................................................................................................................................................................................... | 20 | 3 | 20 | 0.10 | 2 | 0 | 2 | 0 |
| ..................................................................................................................TCATTTATCAAAAAGAGCCT.................................................................................................................... | 20 | 3 | 18 | 0.06 | 1 | 0 | 1 | 0 |
| .AATTGATGATACAAA.......................................................................................................................................................................................................................................... | 15 | 1 | 20 | 0.05 | 1 | 0 | 1 | 0 |
| ..........................................................................................................................................................................................................................TCTGCAACCTTGACGAG............... | 17 | 2 | 20 | 0.05 | 1 | 0 | 0 | 1 |
Generated: 04/24/2015 at 10:41 AM