ID:

dsi_24567

 Coordinate:

x:1145373-1145565 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-37.9 -37.9 -37.9

Flybase annnotation

exon [x_1145566_1147782_+]; CDS [x_1145566_1146217_+]; exon [x_1145191_1145372_+]; CDS [x_1145191_1145372_+]; intron [x_1145373_1145565_+]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATCCTGCGGGACAAACTCACTGGACGACCGCGGGGCGTTGCTTTTGTGCGGTGAGTACGGAGTGCGATCTGCGTGAGCAGCATCCACGATTCGAAATTAGGTCATTAGCTCAATTCCCGTCCAGTGTGCCCCACTTAATTGTATGCTCACAGAAATCCACGTCCAAATTCATTATGAGTTTGACTGATGGCTGAACTACACTTACTTTGATTTCCCATTTGAAACCCGCTTTCTTGCTTGCAGTTACAATAAGCGCGAGGAAGCTCAAGAGGCGATCAAGGCGCTTAACAACA
**************************************************(((((((.((((.(((..((((....))))......(((...((((((((((((((((...............(((.((...((......))..)).))).............((((((((...)))))))).)))))))))...............)))))))....))).....))).)))))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M053
female body
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M025
embryo
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
............AAACGCACTGGAGGACCG....................................................................................................................................................................................................................................................................... 18 2 7 4.86 34 30 1 3 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................AGCTCAAGAGGCGATCAAGGC........... 21 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
..CCTGCGGGACAAACTCACTG............................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................TTGTGCGGTGAGTACGGGGTGCGATC................................................................................................................................................................................................................................ 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.....................................................................TGCGTGAGCAGCATCCACGATTCGAAAT.................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
......................................TGCTTTTGTGCGGTGAGTACGGAG....................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................GCTCAAGAGGCGATCAAGGCGCTT....... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................CTGGACGACCGCGGGGCGTTGCT........................................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...CTGCGGGACAAACTCACTGGACGAC......................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...........................................................TAGTGCGATCTGCGAGAGGAG..................................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................CTACACTCACTTTGAATTCC.............................................................................. 20 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0
........GGTAAAACTCACTGGAGGACC........................................................................................................................................................................................................................................................................ 21 3 5 0.40 2 2 0 0 0 0 0 0 0 0 0
.........GTAAAACTCACTGGAGGACC........................................................................................................................................................................................................................................................................ 20 3 11 0.36 4 3 0 1 0 0 0 0 0 0 0
..............ACTCACTGGAGGACCG....................................................................................................................................................................................................................................................................... 16 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0
..................................................................................................AGGTCAGTAGCTCAATTGGC............................................................................................................................................................................... 20 3 9 0.22 2 1 0 0 0 0 0 0 0 0 1
..................................................................................................AGGTCAGTAGCTCAA.................................................................................................................................................................................... 15 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0
.........GTAAAACGCACTGGACGACC........................................................................................................................................................................................................................................................................ 20 3 8 0.13 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................GAGTTTGACTGGTAGCT..................................................................................................... 17 2 8 0.13 1 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................................................GCAAGAGGCGATGAAGG............ 17 2 20 0.10 2 0 0 0 0 1 0 0 0 1 0
...............................................................................................ATTGGGTCGTTAGCTCA..................................................................................................................................................................................... 17 2 12 0.08 1 0 0 0 0 1 0 0 0 0 0
........GGTAAAACGCACTGGACGAC......................................................................................................................................................................................................................................................................... 20 3 12 0.08 1 1 0 0 0 0 0 0 0 0 0
...............................CGGGCGTTGCATTTGTGGGG.................................................................................................................................................................................................................................................. 20 3 13 0.08 1 0 0 0 1 0 0 0 0 0 0
.....................................GTGCTTTTTTGCGGTGAGGA............................................................................................................................................................................................................................................ 20 3 14 0.07 1 0 0 0 0 1 0 0 0 0 0
.....GCGGGACAGACTAACT................................................................................................................................................................................................................................................................................ 16 2 19 0.05 1 0 0 0 0 1 0 0 0 0 0
........................CGACCGGGGGACGTAGCT........................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0
.........GTAAAACTCACTGGAGGAC......................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0
......................GACGACCGCGCGGCGG............................................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TAGGACGCCCTGTTTGAGTGACCTGCTGGCGCCCCGCAACGAAAACACGCCACTCATGCCTCACGCTAGACGCACTCGTCGTAGGTGCTAAGCTTTAATCCAGTAATCGAGTTAAGGGCAGGTCACACGGGGTGAATTAACATACGAGTGTCTTTAGGTGCAGGTTTAAGTAATACTCAAACTGACTACCGACTTGATGTGAATGAAACTAAAGGGTAAACTTTGGGCGAAAGAACGAACGTCAATGTTATTCGCGCTCCTTCGAGTTCTCCGCTAGTTCCGCGAATTGTTGT
**************************************************(((((((.((((.(((..((((....))))......(((...((((((((((((((((...............(((.((...((......))..)).))).............((((((((...)))))))).)))))))))...............)))))))....))).....))).)))))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M053
female body
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 SRR1275487
Male larvae
.........................................................................................................................GTCTCACGGGTTGAATTA.......................................................................................................................................................... 18 2 11 303.82 3342 3005 322 2 13 0 0 0 0 0 0
.......................................................................................................................TGGTCTCACGGGTTGAATTA.......................................................................................................................................................... 20 3 11 187.64 2064 1762 280 17 5 0 0 0 0 0 0
........................................................................................................................GGTCTCACGGGTTGAATTA.......................................................................................................................................................... 19 2 3 64.33 193 171 19 3 0 0 0 0 0 0 0
.......................................................................................................................CGGTCTCACGGGTTGAATTA.......................................................................................................................................................... 20 3 7 25.86 181 150 30 0 1 0 0 0 0 0 0
.......................................................................................................................TGGTCTCACGGGTTGAATT........................................................................................................................................................... 19 3 20 13.15 263 227 31 3 2 0 0 0 0 0 0
........................................................................................................................GGTCTCACGGGTTGAATT........................................................................................................................................................... 18 2 5 7.00 35 33 2 0 0 0 0 0 0 0 0
.......................................................................................................................AGGTCTCACGGGTTGAATTA.......................................................................................................................................................... 20 2 2 1.50 3 2 1 0 0 0 0 0 0 0 0
.......................................................................................................................GGGTCTCACGGGGTGAATTA.......................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................GGAGGTCTCACGGGTTGAATTA.......................................................................................................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................CAGATCTCACGGGTTGAATTA.......................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................CGGTCTCACGGGTTGAATT........................................................................................................................................................... 19 3 20 0.50 10 8 2 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGGGTAAAGTCTGGGCGAAAG............................................................ 21 3 5 0.40 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................GGAGGTCTCACGGGTTGAATT........................................................................................................................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.........................CTGGCGCCCCGCAGC............................................................................................................................................................................................................................................................. 15 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0
......................................................................................................................CTGGTCTCACGGGTTGAATTA.......................................................................................................................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................AGTTATGGTCAGGTCACTCGG................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................TGGTCTCACGGGGTGAAT............................................................................................................................................................ 18 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................CGGTCTCACGGGTTGAAT............................................................................................................................................................ 18 3 20 0.25 5 0 5 0 0 0 0 0 0 0 0
.....................................................................................................AGTAATCATGTTAAGGGGAG............................................................................................................................................................................ 20 3 4 0.25 1 0 0 0 0 0 0 0 1 0 0
...............................................................................................................TTATGGGCAGGTCACTCG.................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................TTTAGGCGCAGGTTTAAGA.......................................................................................................................... 19 2 4 0.25 1 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................GTCTCACGGGCTGAATTA.......................................................................................................................................................... 18 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................ATCACACGGGGTGAATAA.......................................................................................................................................................... 18 2 6 0.17 1 0 0 0 0 0 0 1 0 0 0
......................................................................................................................CTGGTCTCACGGGTTGAATT........................................................................................................................................................... 20 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................GAGGTCTCACGGGTTGAATTA.......................................................................................................................................................... 21 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................AGTTATGGCCAGGTCACTC..................................................................................................................................................................... 19 3 9 0.11 1 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................AGGGTAAAGTCTGAGCGAAAG............................................................ 21 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................CTTTAGGTGCAGGCT............................................................................................................................... 15 1 10 0.10 1 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................TGATGGGAATGAAATTAA................................................................................. 18 2 10 0.10 1 0 0 0 0 0 0 1 0 0 0
.....................................................................................................AGTAATCATGTTAAGGGGA............................................................................................................................................................................. 19 3 19 0.05 1 0 0 0 0 0 0 0 1 0 0
........................................................................................................................................................ATTGGGTGCAGGTTTA............................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1
........................................................................................................................CGTCTCACGGGTTGAATTA.......................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAATCCTCAAACAGAC........................................................................................................... 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................................TCCGGTAGTTCCGCGCAAT..... 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:1145323-1145615 + dsi_24567 ATCCTGCGGGACAAACTCACTGGACGACCGCGGGGCGTTGCTTTTGTGCGGTGAGTACGGAGTGC---------------------------GATCTGCGTGAGC----------AGCATCCACGATTCGAAATTAGGTCATTA-GCTCA-ATTCCCGTCCAGTGTGCCCCACTTAATTGTATGCTCACAGAAA---------------------------------TCCACGTCCAAATTCATTATGAGTTTGACTGATGGCTGAACTACACTTAC----TTTGATTTCCC-ATTTGAAACC--CGCT-----------------------------------------------------------------------------------------------TTCTTGC-----------------------------------------TTGCAGTTACAATAAGCG-CGAGGAAGCTCAAGAGGCGATCAAGGCGCTTAACAACA
droSec2 scaffold_10:1089691-1089984 + ATTCTGCGGGACAAACTCACTGGACGACCGCGCGGCGTTGCTTTTGTGCGGTGAGTACGGAGTGC---------------------------GATCTGCGTGAGC----------AGCATCCACGATTCGAAATTAGGTCACGGTGCTCA-ATTCCCGTCCAGTGTGCCCCACTTAATTATATGCTCACAAAAA---------------------------------TCCACGTCCAAATTCATTATGAGTTCGACTGATGGCTGAACTACGCTTAC----TTTGATTTCCC-ATTTGAAACC--CGCT-----------------------------------------------------------------------------------------------TTCTTGC-----------------------------------------TTGCAGTTACAATAAGCG-CGAGGAAGCTCAAGAGGCGATCAAGGCGCTTAACAACA
dm3 chrX:1266251-1266543 + ATCCTGCGGGATAAGCTCACTGGACGACCGCGCGGCGTTGCTTTTGTGCGGTGAGTACGG-GTGC---------------------------GATCTGCGTGTGC----------AGCATCCACGATTCGAAATTAGGTCACGGTGCTCA-ATTCCCGTCCAGTGTGCCCCACTTAATTGTATGCTCACAGAAA---------------------------------TCCACGTCCAAATTTATCATGAGTTCGACTGGTGGCTGAACTGCACTTAC----TTCGATTCTGC-TTTTGAAACC--CGCT-----------------------------------------------------------------------------------------------TTCTTGC-----------------------------------------TTGCAGTTACAATAAGCG-CGAGGAAGCTCAAGAGGCGATCAAGGCGCTGAACAACA
droEre2 scaffold_4644:1249943-1250256 + ATCCTGCGGGACAAGCTGACTGGACGACCGCGTGGCGTCGCTTTTGTGCGGTGAGTACGGGGTGC---------------------------GATCTGCGGGAG-------------------TGATTTGAAATTAGGTCACAGTGCTCG-ATTCGCGTCCAGA----CCTACTAAATTGTGTGCTCAGTGAAAGAGATTTTTGGTGAAACATATGTTGAAACTATTATCACGACCAAATTAATCGCGAGTTCGATTGATGGATCAACTACACTTAC----ATAGATTCCCC-ATTTGAAACC--TGCT-----------------------------------------------------------------------------------------------CTCTTGC-----------------------------------------TTGCAGCTACAATAAGCG-TGAGGAGGCGCAAGAGGCGATTAAGGCGCTGAACAACA
droYak3 X:1173955-1174244 + ATCCTGCGGGACAAGCTCACTGGACGACCGCGCGGCGTCGCTTTTGTGCGGTGAGTACGGTGTGC---------------------------GATCTGCGGGAGG----------TGAAGCCATGATTCGAAAGTAGGTCACAGTGCTCG-ATTCGTGTCCAGTGTGCCCCAGTAAATTGTGTGCTCAGAGAAACAAATTTTCGGTGAAA-----------------------------AAAATCAT--GTTCGATTGATGGCT----------TACTCTTGTTGATTCCCC-ATTTGAATCC--TGCT-----------------------------------------------------------------------------------------------CTCCTGC-----------------------------------------TTGCAGTTACAATAAGCG-TGAGGAGGCGCAGGAGGCGATCAAGGCGCTGAACAACA
droEug1 scf7180000408973:100817-100905 - TGTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTGTTTTAAAACCAGCACT-----------------------------------------------------------------------------------------------TTCTCAT-----------------------------------------TTGCAGTTACAACAAGCG-AGAGGAAGCCCAAGAGGCGATCAAGGCCTTGAACAACA
droBia1 scf7180000301760:3835851-3836004 + ATCCTGAGGGACAAGCTCACTGGACGCCCGCGCGGCGTTGCCTTTGTGCGGTGAGTATGGA-TGCAGAAATGGGAAGTGGGAAACGAGATACGAGCTGTGCGA--------------------TGA-TCGAAAATAGGTCAAATTTTCCGAATTAGAATCCAGGTTGGCCCAATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415289:446406-446470 + CTCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAT-----------------------------------------TTGCAGCTACAACAAGCG-CGAGGAGGCCCAGGAGGCGATCAAGGCGCTGAACAACA
droEle1 scf7180000490996:85904-86008 + ATCCTGCGGGACAAGCTCACCGGACGTCCGCGCGGCGTCGCTTTTGTACGGTGAGT-------------------------------------------------------------------------CAAATTGGGTCAAAGTACCTG-ACAAGCATCCAGGATGCTCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAATTA
droRho1 scf7180000778087:75813-75931 + ATCCTGCGGGACAAGCTCACCGGACGTCCGCGCGGCGTCGCTTTTGTGCGGTGAGTAAGGGATAC---------------------------A---TACGTGAAG----------AGC------------AAAATGGGTCAAACTTCCCG-ATTAGTATCCAGGATGCCCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454072:1848887-1849018 - ATTCTCCGGGACAAGCTCACAGGACGCCCGCGCGGCGTCGCATTTGTGCGGTGAGTAAGAAAGGC---------------------------ATTATGCCTCGGG----------AGC--TCGGGACTCCAAAATAGGTCAAAGTTCTCA-ATCAGCATCCAGATTGCTCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302230:43856-43926 + ATCTTGCGTGACAAGCTCACGGGTCGACCGCGGGGCGTGGCGTTTGTTCGGTGAGTGCCAAGTTC---------------------------TGTTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13117:2325551-2325822 - ATCCTGCGCGACAAGCTGACAGGACGCCCCCGCGGCGTGGCATTTGTTCGGTGAGTTGCAAGTCT---------------------------A----------CCAGTCTTCTTATGTCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTATGTTTCATCTATCACTTATTGATTTTCTCATCGAA--------------TTTTTATTATTTTTCTCTCATTCCTGCCACGTTCAT---TCAATTCTGTCATCATCGA-----------ATCGAATATCATTCAAACCCGAATACCCGAATAC---CAAAAAACAGCTATAACAAGCG-CGAGGAGGCACAGGAGGCCATATCGGCGCTGAACAACG
droBip1 scf7180000396696:795753-796047 + ATCCTGCGCGACAAGCTGACAGGACGACCCCGTGGCGTGGCATTTGTTCGGTGAGTCCCC-CTAT---------------------------AGTCTCTATTAGA----------AGTCTCTATA--TATAAGTAGGGACCAGCAGTTCC-ATAT----CCACTTTACTC--------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAATATATATATTTTATTTTTTTTTATTTTTCTCTCATTTCTTTCACGATCATGTTTCTATAT--CCATCATCCATGTTTTGGTGCATCCATTATTATAAATA--------------TACAAAAAAAAAATAGCTATAACAAGCG-CGAGGAGGCACAGGAGGCCATATCGGCGCTGAACAACG
dp5 XL_group1a:4784793-4784848 - ATCTTGCGGGACAAACTCACCGGACGTCCGCGCGGCGTTGCCTTTGTACGGTAAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_11:1371871-1371926 - ATCTTGCGGGACAAACTCACCGGACGTCCGCGCGGCGTTGCCTTTGTACGGTAAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004963:417575-417665 + TATACT-------------------------------------------------------------------------------------------------------------------TATAATTCGACGTCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACT------------------------------------TTT--------------------------------------------------------TTGTTTT-----------------------------------------TTGCAGCTACAACAAGCG-CGAAGAGGCCCAGGAAGCAATTAAATCTTTGAATAACA
droVir3 scaffold_13042:2618525-2618592 - CCCCCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCC-----------------------------------------GTGCAGTTACAACAAGCG-CGAGGAGGCGCAGGAAGCAATCAAGGCGCTCAACAATA
droMoj3 scaffold_6328:977553-977608 + T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGTTATAATAAGCGGCGAGGAAGCACAGGAAGCAATTAAGGCACTCAACAACA
droGri2 scaffold_15203:5440334-5440400 - TTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTCG-----------------------------------------CTGCAGTTACAACAAGCG-TGAGGAAGCACAGGAAGCAATAATGGCGCTCAATAATA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATCCTGCGGGACAAACTCACTGGACGACCGCGGGGCGTTGCTTTTGTGCGGTGAGTACGGAGTGC---------------------------GATCTGCGTGAGC----------AGCATCCACGATTCGAAATTAGGTCATTA-GCTCA-ATTCCCGTCCAGTGTGCCCCACTTAATTGTATGCTCACAGAAA---------------------------------TCCACGTCCAAATTCATTATGAGTTTGACTGATGGCTGAACTACACTTAC----TTTGATTTCCC-ATTTGAAACC--CGCT-----------------------------------------------------------------------------------------------TTCTTGC-----------------------------------------TTGCAGTTACAATAAGCG-CGAGGAAGCTCAAGAGGCGATCAAGGCGCTTAACAACASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCAAGAGGCGATCAAGGC...........2112.00201010000000000000
..CCTGCGGGACAAACTCACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
................................................................................................TGCGTGAGC----------AGCATCCACGATTCGAAAT.......................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
......................................TGCTTTTGTGCGGTGAGTACGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGAGGCGATCAAGGCGCTT.......2411.00101000000000000000
...................CTGGACGACCGCGGGGCGTTGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
...CTGCGGGACAAACTCACTGGACGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
droSec2
ATTCTGCGGGACAAACTCACTGGACGACCGCGCGGCGTTGCTTTTGTGCGGTGAGTACGGAGTGC---------------------------GATCTGCGTGAGC----------AGCATCCACGATTCGAAATTAGGTCACGGTGCTCA-ATTCCCGTCCAGTGTGCCCCACTTAATTATATGCTCACAAAAA---------------------------------TCCACGTCCAAATTCATTATGAGTTCGACTGATGGCTGAACTACGCTTAC----TTTGATTTCCC-ATTTGAAACC--CGCT-----------------------------------------------------------------------------------------------TTCTTGC-----------------------------------------TTGCAGTTACAATAAGCG-CGAGGAAGCTCAAGAGGCGATCAAGGCGCTTAACAACASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-CGAGGAAGCTCAAGAGGC....................1911.0010010
............AAACTCACTGGACGACCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGAGGCGATCAAGGCGCT........2211.0010100
.........................GACCGCGCGGCGTTGCTTTTGTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCTCAAGAGGCGATCAAGG............2111.0010010
dm3
ATCCTGCGGGATAAGCTCACTGGACGACCGCGCGGCGTTGCTTTTGTGCGGTGAGTACGG-GTGC---------------------------GATCTGCGTGTGC----------AGCATCCACGATTCGAAATTAGGTCACGGTGCTCA-ATTCCCGTCCAGTGTGCCCCACTTAATTGTATGCTCACAGAAA---------------------------------TCCACGTCCAAATTTATCATGAGTTCGACTGGTGGCTGAACTGCACTTAC----TTCGATTCTGC-TTTTGAAACC--CGCT-----------------------------------------------------------------------------------------------TTCTTGC-----------------------------------------TTGCAGTTACAATAAGCG-CGAGGAAGCTCAAGAGGCGATCAAGGCGCTGAACAACASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................CACGATTCGAAATTAGGT..................................................................................................................................................................................................................................................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CACTGGACGACCGCGCGGCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TAAGCTCACTGGACGACCGCGCGGCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCG-CGAGGAAGCTCAAGAGGCGATC................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAGCG-CGAGGAAGCTC...........................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGGCGATCAAGGCGCTGA......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TCCTGCGGGATAAGCTCACTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTTACAATAAGCG-CGAGGAAGC.............................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ACTGGACGACCGCGCGGCGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TAAGCTCACTGGACGACCGCGCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................CGACTGGTGGCTGAACTG...............................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CCTGCGGGATAAGCTCACTGGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ACTGGACGACCGCGCGGCGTTGCTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTACGG-GTGC---------------------------GATCTGCGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000
...................................................................................................................................................................................................................................................TCATGAGTTCGACTGGTGGCTGAAC.................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCAAGAGGCGATCAAGGCGCT........2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AGCTCACTGGACGACCGCGCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.........................GACCGCGCGGCGTTGCTTTTGTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCAAGAGGCGATCAAGG............2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGGCGATCAAGGCGCTGAAC....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGCGATCAAGGCGCTGAAC....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGAGGCGATCAAGGCGCTGA......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACAATAAGCG-CGAGGA................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATAAGCG-CGAGGAAGCTCAAGA.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGATCAAGGCGCTGAACAA..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCTCAAGAGGCGATCAAGGCGC.........2411.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CC--CGCT-----------------------------------------------------------------------------------------------TTCTTGC-----------------------------------------TTGCAG...................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGAGGCGATCAAGGCGCTGAG.....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................ATGAGTTCGACTGGTGGCTG....................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...................CTGGACGACCGCGCGGCGTTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.TCCTGCGGGATAAGCTCACTGGACGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AAGCTCACTGGACGACCGCGCGGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................ATCATGAGTTCGACTGGTGGC......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCG-CGAGGAAGCTCAAGAGG.....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CGGCGTTGCTTTTGTGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GAGTACGG-GTGC---------------------------GATCTGCGTGTGC----------..........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAGGCGATCAAGGCGCT........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGGCGATCAAGGCGCTGAACA...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TTTTGTGCGGTGAGTACGG-GT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAATAAGCG-CGAGGAAGCTC...........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................ATTCGAAATTAGGTCACGGTGC..........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..................................................................................................................................AAATTAGGTCACGGTGCTCA-AT....................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ATAAGCTCACTGGACGACCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AAACC--CGCT-----------------------------------------------------------------------------------------------TTCTTGC-----------------------------------------TTGCA....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...........................................................................................................................................CACGGTGCTCA-ATTCCCGTCCAGTGT.......................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACAATAAGCG-CGAGGAAC..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCAAGAGGCGATCAAGGC...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................CCACGATTCGAAATTAGGT..................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................GCTTTTGTGCGGTGAGTACGG-G...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..CCTGCGGGATAAGCTCACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................TCACTGGACGACCGCGCGGCGTTGCTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ATAAGCTCACTGGACGACCGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCG-CGAGGAAGCTCAAGAGGCGATCA...............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAGCG-CGAGGAAGCTCAAGAGG.....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
............................................................................................................................................................................................................................................AAATTTATCATGAGTTCGACTGGTGG.......................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGAAGCTCAAGAGGCGATCAAGG............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...............CTCACTGGACGACCGCGCGGCGTTGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGAGGCGATCAAGGC...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TTTGAAACC--CGCT-----------------------------------------------------------------------------------------------TTCTTGC-----------------------------------------TTG......................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
..CCTGCGGGATAAGCTCACTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................ACGATTCGAAATTAGGTCACGGT............................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................CGACCGCGCGGCGTTGCTTTTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGGCGATCAAGGCGCTGAACAAC.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAGGCGCTGAACAACA1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TGCTCA-ATTCCCGTCCAGT.........................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TGCGGGATAAGCTCACTGGACGACCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................A-ATTCCCGTCCAGTGTGCCCC..................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGAGGCGATCAAGGCGCTG.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAAGCTCAAGAGGCGATCA...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAAGCTCAAGAGGCGATC................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATAAGCG-CGAGGAAGCTCAAGAG......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TCCACGATTCGAAATTAGGTCACGGTGC..........................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AAGCTCACTGGACGACCGCGCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TTCGAAATTAGGTCACGGTGCTCA-ATT...................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGATCAAGGCGCTGAACA...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCG-CGAGGAAGCTCAAGAGGCG...................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
droEre2
ATCCTGCGGGACAAGCTGACTGGACGACCGCGTGGCGTCGCTTTTGTGCGGTGAGTACGGGGTGC---------------------------GATCTGCGGGAG-------------------TGATTTGAAATTAGGTCACAGTGCTCG-ATTCGCGTCCAGA----CCTACTAAATTGTGTGCTCAGTGAAAGAGATTTTTGGTGAAACATATGTTGAAACTATTATCACGACCAAATTAATCGCGAGTTCGATTGATGGATCAACTACACTTAC----ATAGATTCCCC-ATTTGAAACC--TGCT-----------------------------------------------------------------------------------------------CTCTTGC-----------------------------------------TTGCAGCTACAATAAGCG-TGAGGAGGCGCAAGAGGCGATTAAGGCGCTGAACAACASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................CGACCGCGTGGCGTCGCTTTTGTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCG-TGAGGAGGCGCAAGAGGC....................2211.0010000100
.......................................................................................................................................................................................................................................................................................................TTGAAACC--TGCT-----------------------------------------------------------------------------------------------CTCTTGC-----------------------------------------TTGCA....................................................2411.0011000000
.........................................................................................................................................GTCACAGTGCTCG-ATTCGC................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATAAGCG-TGAGGAGGCGCAAGAGGC....................2711.0010000010
droYak3
ATCCTGCGGGACAAGCTCACTGGACGACCGCGCGGCGTCGCTTTTGTGCGGTGAGTACGGTGTGC---------------------------GATCTGCGGGAGG----------TGAAGCCATGATTCGAAAGTAGGTCACAGTGCTCG-ATTCGTGTCCAGTGTGCCCCAGTAAATTGTGTGCTCAGAGAAACAAATTTTCGGTGAAA-----------------------------AAAATCAT--GTTCGATTGATGGCT----------TACTCTTGTTGATTCCCC-ATTTGAATCC--TGCT-----------------------------------------------------------------------------------------------CTCCTGC-----------------------------------------TTGCAGTTACAATAAGCG-TGAGGAGGCGCAGGAGGCGATCAAGGCGCTGAACAACASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGCG-TGAGGAGGCGCAGGAGGC....................2511.00101000000000
...............................................................................................................................................................................................................................................................................................TCCCC-ATTTGAATCC--TGCT-----------------------------------------------------------------------------------------------C........................................................................................................2011.00100100000000
.................CACTGGACGACCGCGCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATAAGCG-TGAGGAGGC.............................1811.00100000010000
...............................................................................................................................................................................................................................................................................................TCCCC-ATTTGAATCC--TGCT-----------------------------------------------------------------------------------------------CTCCTGC-----------------------------------------TTG......................................................2911.00101000000000
...............CTCACTGGACGACCGCGCGGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATAAGCG-TGAGGAGGC.............................1911.00100000010000
droEug1
TGTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTGTTTTAAAACCAGCACT-----------------------------------------------------------------------------------------------TTCTCAT-----------------------------------------TTGCAGTTACAACAAGCG-AGAGGAAGCCCAAGAGGCGATCAAGGCCTTGAACAACASizeHit CountTotal NormTotal
No Reads
droBia1
ATCCTGAGGGACAAGCTCACTGGACGCCCGCGCGGCGTTGCCTTTGTGCGGTGAGTATGGA-TGCAGAAATGGGAAGTGGGAAACGAGATACGAGCTGTGCGA--------------------TGA-TCGAAAATAGGTCAAATTTTCCGAATTAGAATCCAGGTTGGCCCAATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CTCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAT-----------------------------------------TTGCAGCTACAACAAGCG-CGAGGAGGCCCAGGAGGCGATCAAGGCGCTGAACAACASizeHit CountTotal NormTotal
No Reads
droEle1
ATCCTGCGGGACAAGCTCACCGGACGTCCGCGCGGCGTCGCTTTTGTACGGTGAGT-------------------------------------------------------------------------CAAATTGGGTCAAAGTACCTG-ACAAGCATCCAGGATGCTCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAATTASizeHit CountTotal NormTotal
No Reads
droRho1
ATCCTGCGGGACAAGCTCACCGGACGTCCGCGCGGCGTCGCTTTTGTGCGGTGAGTAAGGGATAC---------------------------A---TACGTGAAG----------AGC------------AAAATGGGTCAAACTTCCCG-ATTAGTATCCAGGATGCCCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
ATTCTCCGGGACAAGCTCACAGGACGCCCGCGCGGCGTCGCATTTGTGCGGTGAGTAAGAAAGGC---------------------------ATTATGCCTCGGG----------AGC--TCGGGACTCCAAAATAGGTCAAAGTTCTCA-ATCAGCATCCAGATTGCTCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
ATCTTGCGTGACAAGCTCACGGGTCGACCGCGGGGCGTGGCGTTTGTTCGGTGAGTGCCAAGTTC---------------------------TGTTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
ATCCTGCGCGACAAGCTGACAGGACGCCCCCGCGGCGTGGCATTTGTTCGGTGAGTTGCAAGTCT---------------------------A----------CCAGTCTTCTTATGTCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTATGTTTCATCTATCACTTATTGATTTTCTCATCGAA--------------TTTTTATTATTTTTCTCTCATTCCTGCCACGTTCAT---TCAATTCTGTCATCATCGA-----------ATCGAATATCATTCAAACCCGAATACCCGAATAC---CAAAAAACAGCTATAACAAGCG-CGAGGAGGCACAGGAGGCCATATCGGCGCTGAACAACGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAACAAGCG-CGAGGAG...............................1811.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGCG-CGAGGAGGCACAGGAGGCC...................2711.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-CGAGGAGGCACAGGAGGC....................1911.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCG-CGAGGAGGCACAGGA.......................2111.001010000
droBip1
ATCCTGCGCGACAAGCTGACAGGACGACCCCGTGGCGTGGCATTTGTTCGGTGAGTCCCC-CTAT---------------------------AGTCTCTATTAGA----------AGTCTCTATA--TATAAGTAGGGACCAGCAGTTCC-ATAT----CCACTTTACTC--------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAATATATATATTTTATTTTTTTTTATTTTTCTCTCATTTCTTTCACGATCATGTTTCTATAT--CCATCATCCATGTTTTGGTGCATCCATTATTATAAATA--------------TACAAAAAAAAAATAGCTATAACAAGCG-CGAGGAGGCACAGGAGGCCATATCGGCGCTGAACAACGSizeHit CountTotal NormTotal
No Reads
dp5
ATCTTGCGGGACAAACTCACCGGACGTCCGCGCGGCGTTGCCTTTGTACGGTAAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................GTCCGCGCGGCGTTGCCTTTGTAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020110000000
droPer2
ATCTTGCGGGACAAACTCACCGGACGTCCGCGCGGCGTTGCCTTTGTACGGTAAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TATACT-------------------------------------------------------------------------------------------------------------------TATAATTCGACGTCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACT------------------------------------TTT--------------------------------------------------------TTGTTTT-----------------------------------------TTGCAGCTACAACAAGCG-CGAAGAGGCCCAGGAAGCAATTAAATCTTTGAATAACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACAAGCG-CGAAGAGGCCCAGG........................2511.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCG-CGAAGAGGCCCAGGAAGCAAT.................2611.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAAGCG-CGAAGAGGC.............................1911.00100100
droVir3
CCCCCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCC-----------------------------------------GTGCAGTTACAACAAGCG-CGAGGAGGCGCAGGAAGCAATCAAGGCGCTCAACAATASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGCGCAGGAAGCAATCAAGG............2511.001000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCAATCAAGGCGCTCAACAAT.2411.001000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGGAAGCAATCAAGGC...........1911.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGAAGCAATCAAGGCGC.........2011.001000000000000010000000000000000000000000000000000000000000000000
droMoj3
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGTTATAATAAGCGGCGAGGAAGCACAGGAAGCAATTAAGGCACTCAACAACASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAAGCAATTAAGGCACTC.......2111.001100000
droGri2
TTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTCG-----------------------------------------CTGCAGTTACAACAAGCG-TGAGGAAGCACAGGAAGCAATAATGGCGCTCAATAATASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 04:11 PM