ID:

dsi_24559

Coordinate:

3r:24404483-24404603 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-39.2

Flybase annnotation

CDS [3r_24404471_24404482_+]; five_prime_UTR [3r_24404383_24404470_+]; CDS [3r_24404604_24404753_+]; exon [3r_24404604_24404753_+]; exon [3r_24404383_24404482_+]; intron [3r_24404483_24404603_+]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------##################################################
TGTATTTGCAGGCAGACGATTTAAACGGCGAATCCACCATGGTGAAAGGAGTACGTACGCTTAAGGGCAGTGAGGATTTGCAAATCCGTGGCCTCGGGCCATGTGAATTTGCGAATTTCCAGATGCCGGTTAGGTGCCACGATATCACAACTAATCCACCCATATTTGCAGACTCTGTACACTTACCCCGAGAACTTCCGGGCCTACAAGGCGCTCATCGC
**************************************************...(((.(((((((.((((.((.((((((((((((((((((((...))))))).)).))))))))))).))..))))..)))))))..)))..............................**************************************************
Read size # Mismatch Hit Count Total Norm Total M025
embryo
M053
female body
SRR553486
Makindu_3 day-old ovaries
SRR553485
Chicharo_3 day-old ovaries
M024
male body
SRR553487
NRT_0-2 hours eggs
SRR553488
RT_0-2 hours eggs
GSM343915
embryo
SRR902008
ovaries
SRR618934
dsim w501 ovaries
M023
head
O001
Testis
SRR902009
testis
.............................................................................................................................................................................TCTGTACACTTACCCCGAGAACTTC....................... 25 0 1 45.00 45 41 0 0 2 0 1 1 0 0 0 0 0 0
.............................................................................................................................................................................TCTGTACACTTACCCCGA.............................. 18 0 1 12.00 12 9 0 0 0 3 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CTGTACACTTACCCCGAGAACTTCCG..................... 26 0 1 12.00 12 7 2 0 0 1 0 0 2 0 0 0 0 0
.............................................................................................................................................................................TCTGTACACTTACCCCGAGAACTTCC...................... 26 0 1 8.00 8 4 0 2 0 1 0 0 0 0 0 1 0 0
.............................................................................................................................................................................TCTGTACACTTACCCCGAGAACTTCCG..................... 27 0 1 7.00 7 4 1 1 1 0 0 0 0 0 0 0 0 0
.......................AACGGCGAATCCACCATGGTGAAAGGAAC......................................................................................................................................................................... 29 2 1 7.00 7 0 0 5 1 0 1 0 0 0 0 0 0 0
.............................GAATCCACCATGGTGAAAGGAACT........................................................................................................................................................................ 24 3 1 6.00 6 0 4 0 0 0 0 0 2 0 0 0 0 0
............................................................................................................................................................................................CGAGAACTTCCGGGCCTACAAGGCGC....... 26 0 1 5.00 5 0 0 3 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................CTGTACACTTACCCCGAGA............................ 19 0 1 5.00 5 2 2 0 0 0 1 0 0 0 0 0 0 0
.....................TAAACGGCGAATCCACCATGGTGAAAGGAAC......................................................................................................................................................................... 31 2 1 4.00 4 0 0 1 3 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TCTGTACACTTACCCCGAG............................. 19 0 1 4.00 4 3 0 0 0 1 0 0 0 0 0 0 0 0
....GTTTCCGGCAGACGATTTAAACGGCGA.............................................................................................................................................................................................. 27 3 1 4.00 4 1 0 0 0 0 3 0 0 0 0 0 0 0
..............................................................................................................................................................................CTGTACACTTACCCCGAG............................. 18 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TCTGTACACTTACCCCGAGA............................ 20 0 1 4.00 4 2 0 0 0 0 0 1 0 0 0 1 0 0
...........................GCGAATCCACCATGGTGAAAGGAACT........................................................................................................................................................................ 26 3 1 4.00 4 2 2 0 0 0 0 0 0 0 0 0 0 0
.................GATTTAAACGGCGAATCCACCATGG................................................................................................................................................................................... 25 0 1 4.00 4 0 0 1 2 0 0 1 0 0 0 0 0 0
...............................ATCCACCATGGTGAAAGGAACT........................................................................................................................................................................ 22 3 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0
TGTATTTGCAGGCAGACGATTTAAA.................................................................................................................................................................................................... 25 0 1 3.00 3 0 0 2 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TCTGTACACTTACCCCGAGAAC.......................... 22 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TCTGTACACTTACCCCGTGG............................ 20 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
...................TTTAAACGGCGAATCCACCATGGTGAA............................................................................................................................................................................... 27 0 1 3.00 3 0 0 1 1 0 0 1 0 0 0 0 0 0
.GTATTTGCAGGCAGACGATTTAAACGGC................................................................................................................................................................................................ 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...................TTTAAACGGCGAATCCACCATGGTGA................................................................................................................................................................................ 26 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
...........GCAGACGATTTAAACGGCGAATCCACCA...................................................................................................................................................................................... 28 0 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................CTCTGTACACTTACCCCGA.............................. 19 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0
................CGATTTAAACGGCGAATCCACCATGGTGA................................................................................................................................................................................ 29 0 1 2.00 2 0 0 0 0 0 1 0 0 1 0 0 0 0
...............................ATCCACCATGGTGAAAGGA........................................................................................................................................................................... 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
................CGATTTAAACGGCGAATCCACCATGG................................................................................................................................................................................... 26 0 1 2.00 2 0 0 0 1 0 0 0 0 1 0 0 0 0
.................GATTTAAACGGCGAAT............................................................................................................................................................................................ 16 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0
...................................ACCATGGTGAAAGGA........................................................................................................................................................................... 15 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CGAGAACTTCCGGGCCTACAAGGCGCT...... 27 0 1 2.00 2 0 0 0 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................CTGTACACTTACCCCGAGAAC.......................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TCTGTACACTTACCCCGAGAACTTCCGG.................... 28 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................GAACTTCCGGGCCTACAAGGCG........ 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
..........................GGCGAATCCACCATGGTGAAAGG............................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................CTCTGTACACTTACCCCGAGA............................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................GTACACTTACCCCGAGAACTTCCGGGCCT................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................CGAATTAAACGGCGAATCCACCATGG................................................................................................................................................................................... 26 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................GAATCCACCATGGTGAAAGGA........................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
..............................................................................................................................................................................CTGTACACTTACCCCGAGAACTTCC...................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............CAGACGATTTAAACGGCGA.............................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................AACTTCCGGGCCTACAAGGCGCTCATC.. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CTGTACACTTACCCCGAGAAATTCCG..................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................GAGAACTTCCGGGCCTACAAG........... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................GGCGAATCCACTATGGTGAAAG............................................................................................................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................CTCTGTACACTTACCCCGAGAACTTCCG..................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......TCCGGCAGACGATTTAAACGGCGAA............................................................................................................................................................................................. 25 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................TTTAAACGGCGAATCCACCATGGTGAAAA............................................................................................................................................................................. 29 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
....TTTGCAGGCAGACGATTTAAA.................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................TCTGTACACTTACCCCGAGAACC......................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........TGAGCAGACGATTTAAACGGCGAATCCAC........................................................................................................................................................................................ 29 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CTGTACACTTACCCCGTGG............................ 19 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TACCCCGAGAACTTCCGGGCCTACAAGGCGCT...... 32 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTTCCGGGCCTACAAGGCGCTCATA.. 25 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................TCTGTACACTTACCCCGAGAACTAT....................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CTGTACACTTACCCCG............................... 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................ACGGCGAATCCACCATGGTGAAAGGAAC......................................................................................................................................................................... 28 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................CGATTTAAACGGCGA.............................................................................................................................................................................................. 15 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
........CAGGCAGACGATTTAAACGGCGAA............................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...................TTTAAACGGCGAATCCACCATGGTGAAAGGAAC......................................................................................................................................................................... 33 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................GAACTTCCGGGCCTA............... 15 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
TGTATTTGCAGGCAGACGATTTAAAC................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..........AGCAGACGATTTAAACGGCGAATCCACCA...................................................................................................................................................................................... 29 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................ACTTCCGGCCCTACAAGGC......... 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................ACGCCGAGAACTTCCGGGCCTACAAGG.......... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................ACTCTGTACACTTACCCCGAGAATTTC....................... 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1
..........................GGCGAATCCACCATGGTGAAAGGA........................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................TAAACGGCGAATCCACCATGGTGAAAGGA........................................................................................................................................................................... 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................TTTGCGAATTTCCAGATGCCGGT........................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................GGCGAATCCACCATGGTGAAAGGAACT........................................................................................................................................................................ 27 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................AACGGCGAATCCACCATGGTGAAAGGA........................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TCTGTACACTTACCCCGAGT............................ 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................CTGTACACTTACCCCGAGAACTTCCGGGC.................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................GAATCCACCATGGTGAAAGG............................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................ATTTCCAGATGCCGGTTAGGTG..................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CGAGAACTTCCGGGCCT................ 17 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........GCAGACGATTTAAACGGCGA.............................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CTGTACACTTACCCCGAC............................. 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GAACTCTGTACACTTACCCCGAG............................. 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................CTCTGTACACTTACCCCG............................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................TAAACGGCGAATCCACCATGGTGAA............................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............GACGATTTAAACGGCGAATCCACCA...................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TACACCGAGAACTTCCGGGCCTACAAGG.......... 28 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...................TTTAAACGGCGAATCCACCATGGTGAAAGG............................................................................................................................................................................ 30 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................AACGGCGAATCCACCATGGTGAAAGGAA.......................................................................................................................................................................... 28 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................CGGCGAATCCACCATGGTGAAAGGAAC......................................................................................................................................................................... 27 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................AGAACTTCCGGGCCTACAA............ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................AGAACTTCCGGGCCTACAAG........... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................CACCATGGTGAAAGG............................................................................................................................................................................ 15 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TCTGTACACTTACCCCGAGAACT......................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................CTCTGTACACTTACCCCGAGAACTTCC...................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................GATTTAAACGGCGAATCCACCATGGT.................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................TAAACGGCGAATCCACCATGGTGAAAGG............................................................................................................................................................................ 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CTGTACACTTACCCCGAGAA........................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................CAGACTCTGTACACTTACCCCGTGG............................ 25 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................TGTACACTTACCCCGAGAACTTCCGGGCC................. 29 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................TTACCCCGAGAATTTCCGGGCC................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................GAACTTCCGGGCCTACAAG........... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......TTCCGGCAGACGATTTAAACGG................................................................................................................................................................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................................CGAGAACTTCCGGGCCTACA............. 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TTCCGGGCCTACAAGGCGCTCATCG. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
..........AGCAGACGATTTAAACG.................................................................................................................................................................................................. 17 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................TCTGTACACTTACCCCGAGAACTT........................ 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...........GCAGACGATTTAAACGGC................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AACTCTGTACACTTACCCCGAGA............................ 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................GGCGAATCCACCATGGTGAAAGGAACTC....................................................................................................................................................................... 28 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................AACTCTGTACACTTACCCCGAG............................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............CGGACGGTTTAAACGTCGA.............................................................................................................................................................................................. 19 3 5 0.60 3 0 0 0 0 0 0 0 3 0 0 0 0 0
.........................................................................................................................................................................GAACTCTGTACACTTACCCC................................ 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TATCACAGCCACTCCACCCAT.......................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...........GCAGACGGTTTAAACTTCGA.............................................................................................................................................................................................. 20 3 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................................ACAATGCGCTCATCG. 15 1 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0
............CGGACGGTTTAAACTGCGA.............................................................................................................................................................................................. 19 3 13 0.15 2 0 0 0 0 0 0 0 2 0 0 0 0 0
.......................................................TAGACTTAAGGGGAGTGAG................................................................................................................................................... 19 3 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....TTTCCGGCAGACGATTTA...................................................................................................................................................................................................... 18 2 9 0.11 1 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................TTAAGGGCAGTGAGA.................................................................................................................................................. 15 1 9 0.11 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................GCAGACTCTGTAGACGT..................................... 17 2 10 0.10 1 0 0 0 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

ACATAAACGTCCGTCTGCTAAATTTGCCGCTTAGGTGGTACCACTTTCCTCATGCATGCGAATTCCCGTCACTCCTAAACGTTTAGGCACCGGAGCCCGGTACACTTAAACGCTTAAAGGTCTACGGCCAATCCACGGTGCTATAGTGTTGATTAGGTGGGTATAAACGTCTGAGACATGTGAATGGGGCTCTTGAAGGCCCGGATGTTCCGCGAGTAGCG
**************************************************...(((.(((((((.((((.((.((((((((((((((((((((...))))))).)).))))))))))).))..))))..)))))))..)))..............................**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
SRR553486
Makindu_3 day-old ovaries
SRR553487
NRT_0-2 hours eggs
SRR553488
RT_0-2 hours eggs
............................................................................................................................................................................................................ATGTTACGCGAGTAG.. 15 1 4 1.50 6 6 0 0 0
...............................................................................................................................................................GGTATAAACGTCTGAGACATG......................................... 21 0 1 1.00 1 0 1 0 0
.....................................................................................................................................................................................................GCCCCCGATGTTACGCGAGT.... 20 3 5 0.20 1 1 0 0 0
..............................................................................ACGTTTAGGCGTCGAAGCC............................................................................................................................ 19 3 20 0.20 4 0 0 3 1
...................AAAGTTGCCGCTGAGGTG........................................................................................................................................................................................ 18 2 6 0.17 1 0 1 0 0
............................................................................................................................................................................................................ATGTTACGCGAGTAGCA 17 2 14 0.14 2 2 0 0 0
.............................................................................................................................................................TGGGTCTAAACGTCT................................................. 15 1 9 0.11 1 0 1 0 0
.............................................................................AACGTTTAGGCGTCGAAGC............................................................................................................................. 19 3 20 0.10 2 0 0 1 1
................................................................................................................................................AGCGGTGATTAGGTGGGT........................................................... 18 2 12 0.08 1 0 1 0 0
................................................................................................................................................AGCGGTGATTAGGTGGG............................................................ 17 2 20 0.05 1 0 0 0 1
..........................................................................................................................................................................................................AGATGTTACGCGAGTAG.. 17 2 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:24404433-24404653 + dsi_24559 TGTATTTGCAGGCAGACGATTTAAACGGCGA--ATCCACCATGGTGAAAGGAGTACGTACGCTTAAGGGCAGTG-AGGATTTGCAAA-T--CCGTGGCCTCGGGCCATGTGAATTTGCGAATTTC-------CAGATGCCGGTTA---GGTGCCACGATAT---------------CACAACTAAT------CCA----------CCCATATTTGCAGACTCTGTACACTTACCCCGAGAACTTC-CGGGCCTACAAGGCGCTCATCGC
droSec2 scaffold_4:3908744-3908964 + TGTATTTGCAGGCAGACGATTTAAACGGCGA--ATCCACCATGGTGAAAGGAGTACGTACGCTCAAGGGCAGTG-AGGATTTGCAAA-T--CCGTGGCCTCGGGCCATGTGAATTTGCGAATTTC-------CAGATGCCGGTTA---GGTGCCACGATAT---------------CACAACTAAT------CCA----------CCCATATTTGCAGACTCTGTACACTTACCCCGAGAACTTC-CGGGCCTACAAAGCGCTCATCGC
dm3 chr3R:25045981-25046201 + TGTATTTGCAGGCAGACGATTTAAACGGCGA--ATCCACCATGGTGAAAGGAGTACGTACGCACAAGGGCAGTG-AGGATTTTCCAA-T--CCGTGGCTTCGAGCCATGTGAATTTGCGAATTTC-------CAGATGCCGGTTA---GCTGCCACGATAT---------------CACAACTAAT------CCA----------CCCATATTTGCAGACTCTGTACACTTACCCCGAGAACTTC-CGGGCCTACAAGGCGCTCATCGC
droEre2 scaffold_4820:2984354-2984574 - TGTATTTGTAGGCAGACGACTTAAACGGCGA--ATCCACCATGGTGAAAGGAGTACGTACGCACAAGAGCAGTG-AAGATTTGCAAA-T--CCTGGGCCTAGGACCATGTGAATTTGCGAATTTC-------CAGATGCCGGTTA---TGTGCCACGAAAT---------------CACAACTAAT------CCA----------TCAATATTTGCAGACTCTGTACACTTACCCCGAGAACTTC-CGGGCCTACAAGGCGCTCATCGC
droYak3 3R:21451158-21451378 - TGTATTTGCAGGCAGACGACTTAAACGGCGA--ATCCACCATGGTGAAAGGAGTACGTACGCACAAGAGCAGTG-AAGATTTGCAAA-T--CCATGGCCTTGAACCATGTGAATTTGCGAATTTC-------CAGATGCCGGTTA---TGTGCCACGATAT---------------CACAACTAAC------TCA----------TGAATATTTGCAGACTCTGTACACTTACCCCGAGAACTTC-CGGGCCTACAAGGCGCTCATCGC
droEug1 scf7180000409787:528129-528353 - TATATTTGTAGGCAGACGATTTAAACGGCGA--ATCCACCATGGTGCAAGGAGTACGTAAATATGCCAGGAATA-CAGATTTGCAAA-T--CCGTGGCGTTGGTCGATGAAAATTTGCGAATTTG-------CGAGTGCCGGTTA---TGTGCCACGATTTAATGCTTATCTTC-----------ATGT----------------TTGGTTTTTGCAGACTCTGTACACTTATCCCGAGAACTTC-CGGGCCTACAAGGCTCTTATTGC
droBia1 scf7180000302136:3092345-3092570 - CGTATTTGCAGGCAGACGATTTAAACGGCGA--ATCCACCATGGTGCAAGGAGTACGTACACCCGTGGGCAGTG-GGGATTTGCCAA-T--CCGTGGCGCTGGGCCATGTGAATTTGCAAATTTG-------CCAATGCCGGCTA---GGTGCCACGACTT-TCGCTAATCTGCC------TTC------TCT----------TC---GGTTTTGCAGACTCTGTACACTTACCCCGAGAACTTC-CGGGCCTACAAGGCGCTGATTGC
droTak1 scf7180000415310:306912-307140 + CATATTTGCAGGCAGACGATTTAAACGGCGA--ATCCACAATGGTGCAAGGAGTGAGTACGCGCGGGAGGAGTG-GAAATTTGCCAA-T--CCTAGGCCTTGGGCCAAGTGAATTTGCGAATTTT-------CAAATGCCGGTTATGTGCTGCCACGACTT-TTGCTAATTTTTC------CTC------ATA----------TC---TTTTTCGCAGACTCTGTACACTTATCCCGAGAACTTC-CGGGCCTACAAGGCGCTCATTGC
droEle1 scf7180000491280:1233978-1234209 + TATATTTGTAGGCAGACGTTTTAAACGGCGA--ATCCACCATGGTGCAAGGAGTACGTAAATGAAAGCGGTATG-CAAATTCGCCGA-AAGCAGCTGCTCGAGGCCATGTGAATTGGCGAATTTG-------CAAATGCCGGTTAAAAGGTGCCACGACAC-ATACTAATTCAGA------TTG------ACT------------TGATTGTTTGCAGACTCTGTACACTTATCCCGAGAACTTC-CGCGCGTACAAGGCGCTCATTGC
droRho1 scf7180000779659:52667-52892 - TATATTTGTAGGCAGACGATTTAAACGGCGA--ATCCACCATGGTGCAAGGAGTACGTTAATAAATTCGGTGTG-CAAATTTGCAAAAAAACAGCTGTTTGAGGCCATGTGAATTTGCGAATTTG-------CAAATGCCGGTTA---GGTGCCACGACTT-CTACTAATTTTGA------TTG----------------------ACATGTTTGCAGACTCTGTACACTTATCCCGAGAACTTC-CGCGCGTACAAGGCGCTCATTGC
droFic1 scf7180000453776:341981-342210 + TACATTTGTAGGCAGACGATTTAAACGGCGA--ATCCACCATGGTGCAAGGAGTACGTAGACACAAAAGCACTGCAAAATTTACTAA-T--CTG-GGCCTTGCGCCATGCGAATTTGCGAATTTT-------CAAAAGCCGGTTT---GGTGCCACGACAT-TTACTAATTTGCC------CT--ATATCTTA----------TC---TTATTGGCAGACTCTGTACACTTATCCCGAGAACTTC-CGCGCGTACAAGGCGCTCATCGC
droKik1 scf7180000302466:421071-421283 - -------------------------CGGCGAA-AAACACGATGGTGCAAGGAGTGCGTATAAAAGATTTAGGCA-AAAATCTAAAAA-TATCAGCGCGATCGCGTCCTGTTTATTTGCGAATCCTTGCTGGCCGCTCGCCCAGGA---TGTGCTTGG-CCCGATGCTAATCA------AAGCTCTT------TC-----------CGTTTGATTCCAGACGCTGTACACTTACCCCGAGAACTTC-CGCGCGTACAAGGCGCTCATCGC
droAna3 scaffold_13340:14188041-14188261 + -------------------------CGGCGAAAATCCACGATGGTGCAAGGAGTACGTATAAAAAATGGCTTTA-AAAATTCGCAAA-TTCCAACGCAATCACGGCATGATAATTCGCGAATTCTTTCTCGGCACACGCCGAAAA---GATCCAAAAACCCGATACTAATTATC-TTT--------TGTT-----TGCTACTATC---GTAATTTCAGACGCTGTACACTTACCCCGAGAACTTC-CGCGCGTACAAGGCCCTCATCGC
droBip1 scf7180000395971:975124-975344 - -------------------------CGGCGAAAATCCACGATGGTGCAAGGAGTACGTATGAAAAACGGTTTTA-ATAATTCGCAAA-TTATAGCGCAATCACGGCATGATAATTTGCGAATTTCTTCTCGGCAGACGCCGATAA---GATCGAAAAACCCGATACTAATTATC-TTT--------TGTT-----TGCTATTGCC---GTACTTGTAGACGCTGTACACTTACCCCGAGAACTTC-CGCGCGTACAAGGCGCTCATCGC
dp5 2:1894579-1894637 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGCAGACACTTTACACTTACCCCGAGAACTTC-CGCGCGTACAAGGCGCTGATTGC
droPer2 scaffold_7:2058315-2058374 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGCAGACACTTTACACTTACCCCGAGAACTTCCCGCGCGTACAAGGCGCTGATTGC
droWil2 scf2_1100000004921:1747970-1748030 - CGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGCAGACACTTTACACTTACCCTGAAAACTTC-CGCGCTTACAAGGCCCTTATTGC
droVir3 scaffold_12822:2346759-2346823 - CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGTAATTGCAGACGCTTTACACTTATCCCGAGAACTTC-CGCGCATACAAGGCACTTATTGC
droMoj3 scaffold_6540:26467733-26467791 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGTAGACACTTTACACTTATCCCGAGAACTTC-CGCGCATACAAGGCCCTCATCGC
droGri2 scaffold_14624:3265645-3265724 - -------------------------------------------------------------------------------------------------------------------------------------------------------------ATCT---------------CTCAACTATC------AAA----------TTTATAATTACAGACGCTTTACACTTATCCCGAGAACTTC-CGCGCGTACAAAGCCCTCATTGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGTATTTGCAGGCAGACGATTTAAACGGCGA--ATCCACCATGGTGAAAGGAGTACGTACGCTTAAGGGCAGTG-AGGATTTGCAAA-T--CCGTGGCCTCGGGCCATGTGAATTTGCGAATTTC-------CAGATGCCGGTTA---GGTGCCACGATAT---------------CACAACTAAT------CCA----------CCCATATTTGCAGACTCTGTACACTTACCCCGAGAACTTC-CGGGCCTACAAGGCGCTCATCGCSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGAACTTC-.......................25145.0045004100020110000000
............................................................................................................................................................................................................................TCTGTACACTTACCCCGA...............................18112.001203900000000000000
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAACTTC-CG.....................26112.001201720000000200000
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGAACTTC-C......................2618.00811400002000000000
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGAACTTC-CG.....................2717.00700410011000000000
.......................AACGGCGA--ATCCACCATGGTGAAAGGAAC.......................................................................................................................................................................................................................2917.00700000015100000000
.............................GA--ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2416.00600040000000200000
...........................................................................................................................................................................................................................................CGAGAACTTC-CGGGCCTACAAGGCGC.......2615.00500000013100000000
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGA.............................1915.00500220000100000000
.....................TAAACGGCGA--ATCCACCATGGTGAAAGGAAC.......................................................................................................................................................................................................................3114.00400000031000000000
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAG..............................1914.00401300000000000000
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAG..............................1814.00400310000000000000
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGA.............................2014.00410200000010000000
...........................GCGA--ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2614.00400220000000000000
.................GATTTAAACGGCGA--ATCCACCATGG.................................................................................................................................................................................................................................2514.00400000021010000000
.................................ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2213.00300030000000000000
TGTATTTGCAGGCAGACGATTTAAA....................................................................................................................................................................................................................................................2513.00300000012000000000
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGAAC...........................2213.00300300000000000000
...................TTTAAACGGCGA--ATCCACCATGGTGAA.............................................................................................................................................................................................................................2713.00300000011010000000
.GTATTTGCAGGCAGACGATTTAAACGGC................................................................................................................................................................................................................................................2812.00200200000000000000
...................TTTAAACGGCGA--ATCCACCATGGTGA..............................................................................................................................................................................................................................2612.00200000002000000000
...........GCAGACGATTTAAACGGCGA--ATCCACCA....................................................................................................................................................................................................................................2812.00200000001100000000
...........................................................................................................................................................................................................................CTCTGTACACTTACCCCGA...............................1912.00201100000000000000
................CGATTTAAACGGCGA--ATCCACCATGGTGA..............................................................................................................................................................................................................................2912.00200000000100010000
.................................ATCCACCATGGTGAAAGGA.........................................................................................................................................................................................................................1912.00200020000000000000
................CGATTTAAACGGCGA--ATCCACCATGG.................................................................................................................................................................................................................................2612.00200000010000010000
.................GATTTAAACGGCGA--AT..........................................................................................................................................................................................................................................1612.00200000011000000000
.....................................ACCATGGTGAAAGGA.........................................................................................................................................................................................................................1512.00200000011000000000
...........................................................................................................................................................................................................................................CGAGAACTTC-CGGGCCTACAAGGCGCT......2712.00200000010010000000
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAAC...........................2112.00200200000000000000
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGAACTTC-CGG....................2812.00200000002000000000
..............................................................................................................................................................................................................................................GAACTTC-CGGGCCTACAAGGCG........2212.00200020000000000000
..........................GGCGA--ATCCACCATGGTGAAAGG..........................................................................................................................................................................................................................2311.00100000000000100000
...........................................................................................................................................................................................................................CTCTGTACACTTACCCCGAGA.............................2111.00100100000000000000
...............................................................................................................................................................................................................................GTACACTTACCCCGAGAACTTC-CGGGCCT................2911.00100100000000000000
.............................GA--ATCCACCATGGTGAAAGGA.........................................................................................................................................................................................................................2111.00100001000000000000
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAACTTC-C......................2511.00101000000000000000
............CAGACGATTTAAACGGCGA--............................................................................................................................................................................................................................................1911.00100010000000000000
...............................................................................................................................................................................................................................................AACTTC-CGGGCCTACAAGGCGCTCATC..2711.00100010000000000000
............................................................................................................................................................................................................................................GAGAACTTC-CGGGCCTACAAG...........2111.00100100000000000000
...........................................................................................................................................................................................................................CTCTGTACACTTACCCCGAGAACTTC-CG.....................2811.00101000000000000000
...................TTTAAACGGCGA--ATCCACCATGGTGAAAA...........................................................................................................................................................................................................................2911.00100000000000010000
....TTTGCAGGCAGACGATTTAAA....................................................................................................................................................................................................................................................2111.00100000000001000000
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGAACC..........................2311.00100100000000000000
......................................................................................................................................................................................................................................TACCCCGAGAACTTC-CGGGCCTACAAGGCGCT......3211.00100000010000000000
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGAACTAT-.......................2511.00100100000000000000
.............................................................................................................................................................................................................................CTGTACACTTACCCCG................................1611.00100000001000000000
........................ACGGCGA--ATCCACCATGGTGAAAGGAAC.......................................................................................................................................................................................................................2811.00100000001000000000
................CGATTTAAACGGCGA--............................................................................................................................................................................................................................................1511.00100000000001000000
........CAGGCAGACGATTTAAACGGCGA--A...........................................................................................................................................................................................................................................2411.00100000000010000000
...................TTTAAACGGCGA--ATCCACCATGGTGAAAGGAAC.......................................................................................................................................................................................................................3311.00100000001000000000
..............................................................................................................................................................................................................................................GAACTTC-CGGGCCTA...............1511.00100000000010000000
TGTATTTGCAGGCAGACGATTTAAAC...................................................................................................................................................................................................................................................2611.00100000000010000000
..........................GGCGA--ATCCACCATGGTGAAAGGA.........................................................................................................................................................................................................................2411.00100000000100000000
.....................TAAACGGCGA--ATCCACCATGGTGAAAGGA.........................................................................................................................................................................................................................2911.00100000010000000000
.................................................................................................................TTTGCGAATTTC-------CAGATGCCGGT..............................................................................................................................2311.00100000000010000000
..........................GGCGA--ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2711.00100010000000000000
.......................AACGGCGA--ATCCACCATGGTGAAAGGA.........................................................................................................................................................................................................................2711.00100000001000000000
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGT.............................2011.00110000000000000000
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAACTTC-CGGGC..................2911.00100010000000000000
.............................GA--ATCCACCATGGTGAAAGG..........................................................................................................................................................................................................................2011.00100010000000000000
........................................................................................................................ATTTC-------CAGATGCCGGTTA---GGTG.....................................................................................................................2211.00100100000000000000
...........................................................................................................................................................................................................................................CGAGAACTTC-CGGGCCT................1711.00100000010000000000
...........GCAGACGATTTAAACGGCGA--............................................................................................................................................................................................................................................2011.00100010000000000000
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAC..............................1811.00100100000000000000
...........................................................................................................................................................................................................................CTCTGTACACTTACCCCG................................1811.00101000000000000000
.....................TAAACGGCGA--ATCCACCATGGTGAA.............................................................................................................................................................................................................................2511.00100010000000000000
..............GACGATTTAAACGGCGA--ATCCACCA....................................................................................................................................................................................................................................2511.00100010000000000000
...................TTTAAACGGCGA--ATCCACCATGGTGAAAGG..........................................................................................................................................................................................................................3011.00100000001000000000
.......................AACGGCGA--ATCCACCATGGTGAAAGGAA........................................................................................................................................................................................................................2811.00100000000100000000
.........................CGGCGA--ATCCACCATGGTGAAAGGAAC.......................................................................................................................................................................................................................2711.00100000001000000000
.............................................................................................................................................................................................................................................AGAACTTC-CGGGCCTACAA............1911.00100100000000000000
.............................................................................................................................................................................................................................................AGAACTTC-CGGGCCTACAAG...........2011.00100010000000000000
....................................CACCATGGTGAAAGG..........................................................................................................................................................................................................................1511.00100000001000000000
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGAACT..........................2311.00100100000000000000
...........................................................................................................................................................................................................................CTCTGTACACTTACCCCGAGAACTTC-C......................2711.00100100000000000000
.................GATTTAAACGGCGA--ATCCACCATGGT................................................................................................................................................................................................................................2611.00100000000000010000
.....................TAAACGGCGA--ATCCACCATGGTGAAAGG..........................................................................................................................................................................................................................2811.00100000010000000000
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAA............................2011.00100000000000100000
..............................................................................................................................................................................................................................TGTACACTTACCCCGAGAACTTC-CGGGCC.................2911.00100000000010000000
..............................................................................................................................................................................................................................................GAACTTC-CGGGCCTACAAG...........1911.00100010000000000000
...........................................................................................................................................................................................................................................CGAGAACTTC-CGGGCCTACA.............2011.00101000000000000000
..................................................................................................................................................................................................................................................TTC-CGGGCCTACAAGGCGCTCATCG.2511.00100000000001000000
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGAACTT.........................2411.00100000000010000000
...........GCAGACGATTTAAACGGC................................................................................................................................................................................................................................................1811.00100100000000000000
..............................................................TTAAGGGCAGTG-AGA...............................................................................................................................................................................................1590.11100000000001000000
droSec2
TGTATTTGCAGGCAGACGATTTAAACGGCGA--ATCCACCATGGTGAAAGGAGTACGTACGCTCAAGGGCAGTG-AGGATTTGCAAA-T--CCGTGGCCTCGGGCCATGTGAATTTGCGAATTTC-------CAGATGCCGGTTA---GGTGCCACGATAT---------------CACAACTAAT------CCA----------CCCATATTTGCAGACTCTGTACACTTACCCCGAGAACTTC-CGGGCCTACAAAGCGCTCATCGCSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
.............................GA--ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2418.0080080
..........................GGCGA--ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2717.0070142
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAG..............................1816.0060060
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGA.............................1915.0051040
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAACTTC-CG.....................2615.0052030
..............................A--ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2315.0050230
...........................................................................................................................................................................................................................................................CTACAAAGCGCTCATCGC1814.0040040
..........................GGCGA--ATCCACCATGGTGAAAGGA.........................................................................................................................................................................................................................2413.0030030
.............................GA--ATCCACCATGGTGAAAGG..........................................................................................................................................................................................................................2013.0031020
.................................ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2213.0031020
.............................GA--ATCCACCATGGTGAAAG...........................................................................................................................................................................................................................1913.0030030
....................TTAAACGGCGA--ATCCACCATGGT................................................................................................................................................................................................................................2313.0030120
............................CGA--ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2512.0020020
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGAACTTC-CG.....................2712.0022000
...................TTTAAACGGCGA--ATCCACCATGGT................................................................................................................................................................................................................................2412.0020020
.............................GA--ATCCACCATGGTGAAAGGA.........................................................................................................................................................................................................................2112.0020110
...............................................................................................................................................................................................................................................AACTTC-CGGGCCTACAAAGCGCT......2312.0020020
.................................ATCCACCATGGTGAAAGGA.........................................................................................................................................................................................................................1912.0021010
..................................................................................................................................................................................................................................CACTTACCCCGAGAACTTC-CGGGCCTA...............2711.0010010
...................TTTAAACGGCGA--ATCCACCATGGTGA..............................................................................................................................................................................................................................2611.0010010
......................AAACGGCGA--ATCCACCATGGT................................................................................................................................................................................................................................2111.0010010
........CAGGCAGACGATTTAAAC...................................................................................................................................................................................................................................................1811.0010010
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGAACTTC-.......................2511.0011000
...................TTTAAACGGCGA--ATCCACCATGGTGAA.............................................................................................................................................................................................................................2711.0011000
.................GATTTAAACGGCGA--ATCCACCATG..................................................................................................................................................................................................................................2411.0010010
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAACTTC-C......................2511.0010010
...................................................................................................................................................................................................................................ACTTACCCCGAGAACTTC-CG.....................2011.0010010
.........................CGGCGA--ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2811.0010010
....................TTAAACGGCGA--ATCCACCATGGTGAA.............................................................................................................................................................................................................................2611.0010010
.GTATTTGCAGGCAGACGATTTAAAC...................................................................................................................................................................................................................................................2511.0010010
..................................................................................................................................................................................................................................CACTTACCCCGAGAACTTC-CG.....................2111.0010100
...........................................................................................................................................................................................................................................CGAGAACTTC-CGGGCCTACAAAGC.........2411.0010010
.............................GA--ATCCACCATGGTGAAAGGAAC.......................................................................................................................................................................................................................2311.0010100
....................................................................................................................................................................................................................................CTTACCCCGAGAACTTC-CGGGCCT................2411.0010010
...........................................................................................................................................................................................................................CTCTGTACACTTACCCCGAG..............................2011.0011000
.....................................................................................................................................................................................................................................TTACCCCGAGAACTTC-CGG....................1911.0010010
.............AGACGATTTAAACGGCGA--ATCCACCAT...................................................................................................................................................................................................................................2711.0011000
..................................TCCACCATGGTGAAAGGA.........................................................................................................................................................................................................................1811.0010010
................................................................................................................................................................................................................................................ACTTC-CGGGCCTACAAAGCGCT......2211.0010010
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGA.............................2011.0011000
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAA............................2011.0010010
........................ACGGCGA--ATCCACCATGGTGAAAG...........................................................................................................................................................................................................................2411.0010010
......................AAACGGCGA--ATCCACCATGGTGAAAGG..........................................................................................................................................................................................................................2711.0010100
..................ATTTAAACGGCGA--ATCCACCAT...................................................................................................................................................................................................................................2211.0010010
................................................................................................................................................................................................................................................ACTTC-CGGGCCTACAAAGCGC.......2111.0010010
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAACTTC-CGGGC..................2911.0010010
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAAC...........................2111.0010010
..........GGCAGACGATTTAAACGGCGA--ATC.........................................................................................................................................................................................................................................2411.0010010
.................................ATCCACCATGGTGAAAGGAA........................................................................................................................................................................................................................2011.0010001
.....................................................................................................................................................................................................................................TTACCCCGAGAACTTC-CGGGC..................2111.0011000
..........................GGCGA--ATCCACCATGGTGAAAGG..........................................................................................................................................................................................................................2311.0010010
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAACTTC-.......................2411.0011000
.................................ATCCACCATGGTGAAAGG..........................................................................................................................................................................................................................1811.0010010
........................ACGGCGA--ATCCACCATGGTGAAAGG..........................................................................................................................................................................................................................2511.0010010
...................................CCACCATGGTGAAAGGAAC.......................................................................................................................................................................................................................1920.5010010
...................................CCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2060.5030030
dm3
TGTATTTGCAGGCAGACGATTTAAACGGCGA--ATCCACCATGGTGAAAGGAGTACGTACGCACAAGGGCAGTG-AGGATTTTCCAA-T--CCGTGGCTTCGAGCCATGTGAATTTGCGAATTTC-------CAGATGCCGGTTA---GCTGCCACGATAT---------------CACAACTAAT------CCA----------CCCATATTTGCAGACTCTGTACACTTACCCCGAGAACTTC-CGGGCCTACAAGGCGCTCATCGCSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
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............................................................................................................................................................................................................................................GAGAACTTC-CGGGCCTACAA............2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..........................................................................................................................................................................................................................................CCGAGAACTTC-CGGGCCTACA.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TCCACCATGGTGAAAGGAA........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................GAGAACTTC-CGGGCCTACA.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................AATTTC-------CAGATGCCGGTTA---GCTGCCA..................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................CCGGTTA---GCTGCCACGATAT---------------CA...........................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GACGATTTAAACGGCGA--ATCCA.......................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TTCGAGCCATGTGAATTTGCG......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AAACGGCGA--ATCCACCATGGTGAAAG...........................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................CGAATTTC-------CAGATGCCGGTTA---G........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................AACTTC-CGGGCCTACAAGGCGCTC.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AGGAGTACGTACGCACAA...........................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
.....................TAAACGGCGA--ATCCACCATGGTGAAAGC..........................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................ACACTTACCCCGAGAACTTC-CGGGC..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................ACGTACGCACAAGGGCAGTG-AGGATTTT..........................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................................................................................................TTC-CGGGCCTACAAGGCGCTCATC..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACGGCGA--ATCCACCATGGTGAAA............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TACACTTACCCCGAGAACTTC-CGGG...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CATGGTGAAAGGAGTACGTAC.................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................ACCCCGAGAACTTC-CGGGCC.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CGAGAACTTC-CGGGCCTACA.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................GGCCTACAAGGCGCTCATCG.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CCACCATGGTGAAAGGAG........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TACCCCGAGAACTTC-CGGGCCT................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATTTAAACGGCGA--ATCCAC......................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.GTATTTGCAGGCAGACGAT.........................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................ACTTACCCCGAGAACTTC-CGGGCCTAC..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................ACACTTACCCCGAGAACTTC-CGGGCC.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGGCAGACGATTTAAACGGCGA--ATC.........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................ATTTAAACGGCGA--ATCCACCATGGT................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................TTGCGAATTTC-------CAGATGCCGG...............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CCGAGAACTTC-CGGGCCTACAAGGCG........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CGAGAACTTC-CGGGCCTACAAGG..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........GCAGACGATTTAAACGGCGA--AT..........................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TCCACCATGGTGAAAGGAG........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................TCTGTACACTTACCCCGA...............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AACGGCGA--ATCCACCATGG.................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................AACTTC-CGGGCCTACAAGGCGC.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................CTCTGTACACTTACCCCGAGAACT..........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................A--ATCCACCATGGTGAAAG...........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CTTC-CGGGCCTACAAGGCGCTC.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TGAATTTGCGAATTTC-------CAGATGCCGGT..............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
droEre2
TGTATTTGTAGGCAGACGACTTAAACGGCGA--ATCCACCATGGTGAAAGGAGTACGTACGCACAAGAGCAGTG-AAGATTTGCAAA-T--CCTGGGCCTAGGACCATGTGAATTTGCGAATTTC-------CAGATGCCGGTTA---TGTGCCACGAAAT---------------CACAACTAAT------CCA----------TCAATATTTGCAGACTCTGTACACTTACCCCGAGAACTTC-CGGGCCTACAAGGCGCTCATCGCSizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
.............................GA--ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................24130.003010504920
..........................GGCGA--ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2718.0082001410
......................AAACGGCGA--ATCCACCATGGT................................................................................................................................................................................................................................2114.0040300010
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGA.............................1914.0042002000
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAACTTC-CG.....................2614.0040000400
.................................ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2223.5074000120
..............................................................................................................................................................................................................................................GAACTTC-CGGGCCTACAAGGCGCT......2413.0030002100
..............................................................................................................................................................................................................................................GAACTTC-CGGGCCTACAA............1813.0033000000
..............................................................................................................................................................................................................................................GAACTTC-CGGGCCTACAAG...........1913.0030300000
..........GGCAGACGACTTAAACGGC................................................................................................................................................................................................................................................1912.0020200000
...................CTTAAACGGCGA--ATCCACCATGGT................................................................................................................................................................................................................................2412.0021000010
.............................GA--ATCCACCATGGTGAAAGGA.........................................................................................................................................................................................................................2112.0020000020
....................TTAAACGGCGA--ATCCACCATGGT................................................................................................................................................................................................................................2312.0020100010
..............................................................................................................................................................................................................................................GAACTTC-CGGGCCTACAAGGC.........2112.0020200000
.................................ATCCACCATGGTGAAAGGA.........................................................................................................................................................................................................................1912.0020001100
.............AGACGACTTAAACGGCGA--............................................................................................................................................................................................................................................1812.0020001100
..............................A--ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2312.0021100000
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAAC...........................2111.0010001000
..................................TCCACCATGGTGAAAGGAGTACGTA..................................................................................................................................................................................................................2511.0010000010
..........GGCAGACGACTTAAACGGCG...............................................................................................................................................................................................................................................2011.0010000100
......................AAACGGCGA--ATCCACCATGGTGA..............................................................................................................................................................................................................................2311.0010000010
..........................................................................................................................................................................................................................................CCGAGAACTTC-CGGGCCTAC..............2011.0010100000
..................................................................................................................................................................................................................................................TTC-CGGGCCTACAAGGCGCTCATC..2411.0011000000
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAACTTC-CGGGC..................2911.0010100000
............................CGA--ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2511.0011000000
.....TTGTAGGCAGACGACTTAAACGG.................................................................................................................................................................................................................................................2311.0010001000
............................................................................................................................................................................................................................................GAGAACTTC-CGGGCCTACAAGG..........2211.0010100000
..............................................................................................................................................................................................................................................GAACTTC-CGGGCCTACAAGGCG........2211.0011000000
......................AAACGGCGA--ATCCACCATGGC................................................................................................................................................................................................................................2111.0010100000
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAG..............................1811.0010000010
..........................GGCGA--ATCCACCATGGTGAAAGG..........................................................................................................................................................................................................................2311.0010001000
..............................................................ACAAGAGCAGTG-AAGATTTGC.........................................................................................................................................................................................2111.0010000100
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGAACT..........................2311.0010100000
...........................................................................................................................................................................................................................................CGAGAACTTC-CGGGCCTACAAGG..........2311.0011000000
.............................GA--ATCCACCATGGTGAAAGG..........................................................................................................................................................................................................................2011.0011000000
......................AAACGGCGA--ATCCACCATGG.................................................................................................................................................................................................................................2011.0010100000
...................CTTAAACGGCGA--ATCCACC.....................................................................................................................................................................................................................................1911.0010000010
...............................................................................................................................................................................................................................................AACTTC-CGGGCCTACAAGG..........1911.0010100000
...............................................................................................................................................................................................................................................AACTTC-CGGGCCTACAAGGCGCT......2311.0011000000
.........................................TGGTGAAAGGAGTACGTA..................................................................................................................................................................................................................1811.0010000010
................................................................................................................................................................................................................................................ACTTC-CGGGCCTACAAGGCGCT......2211.0011000000
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGAACTTC-CG.....................2711.0011000000
.....................................................................................................................................................................................................................................TTACCCCGAGAACTTC-CGGGCCC................2311.0010100000
...................CTTAAACGGCGA--ATCCACCATGGTGA..............................................................................................................................................................................................................................2611.0010000010
.................................................................................................................................................................................................................................ACACTTACCCCGAGAACTTC-C......................2111.0010100000
...........................................................................................................................................................................................................................CTCTGTACACTTACCCCGAG..............................2011.0010001000
....................................................................................................................................................................................................................................CTTACCCCGAGAACTTC-CGGGCCTACAA............2811.0010100000
.........................CGGCGA--ATCCACCATGGT................................................................................................................................................................................................................................1811.0010000010
..............................................................................................................................................................................................................................................GAACTTC-CGGGCCTACAAGG..........2011.0011000000
..........................GGCGA--ATCCACCATGGTGAAAG...........................................................................................................................................................................................................................2211.0010001000
.................GACTTAAACGGCGA--ATCCACCATGGC................................................................................................................................................................................................................................2611.0010100000
...........................................................................................................................................................................................................................CTCTGTACACTTACCCCGA...............................1911.0010001000
..........GGCAGACGACTTAAACGGCGA--ATCCAC......................................................................................................................................................................................................................................2711.0010100000
.....................TAAACGGCGA--ATCCACCATGGTGAAAG...........................................................................................................................................................................................................................2711.0011000000
......TGTAGGCAGACGACTTAAACGGCGA--ATC.........................................................................................................................................................................................................................................2811.0011000000
............CAGACGACTTAAACGGCGA--AT..........................................................................................................................................................................................................................................2111.0010100000
.......................AACGGCGA--ATCCACCATGGTGAAAG...........................................................................................................................................................................................................................2511.0010000100
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAACTTC-C......................2511.0010100000
.................................ATCCACCATGGTGAAAGGAA........................................................................................................................................................................................................................2011.0011000000
.......................AACGGCGA--ATCCACCATGGTGA..............................................................................................................................................................................................................................2211.0010001000
..........................................................................................................................................................................................................................ACTCTGTACACTTACCCCGA...............................2011.0010100000
droYak3
TGTATTTGCAGGCAGACGACTTAAACGGCGA--ATCCACCATGGTGAAAGGAGTACGTACGCACAAGAGCAGTG-AAGATTTGCAAA-T--CCATGGCCTTGAACCATGTGAATTTGCGAATTTC-------CAGATGCCGGTTA---TGTGCCACGATAT---------------CACAACTAAC------TCA----------TGAATATTTGCAGACTCTGTACACTTACCCCGAGAACTTC-CGGGCCTACAAGGCGCTCATCGCSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
.............................GA--ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................24113.001304800010000
.................................ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2219.00905210010000
................................................................................................................................................................................................................................TACACTTACCCCGAGAACTTC-CGGGCC.................2715.00503200000000
.............................GA--ATCCACCATGGTGAAAGGAA........................................................................................................................................................................................................................2215.00504100000000
.............................GA--ATCCACCATGGTGAAAGG..........................................................................................................................................................................................................................2015.00504000010000
..........................GGCGA--ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2714.00401100000002
..........GGCAGACGACTTAAACGGC................................................................................................................................................................................................................................................1914.00401300000000
.............................GA--ATCCACCATGGTGAAAGGAAC.......................................................................................................................................................................................................................2314.00400400000000
..................ACTTAAACGGCGA--ATCCACCAT...................................................................................................................................................................................................................................2213.00300000010002
..............................................................................................................................................................................................................................TGTACACTTACCCCGAGAACTTC-CGGGCC.................2913.00300300000000
...........................................................................................................................................................................................................................CTCTGTACACTTACCCCGAGA.............................2112.00201100000000
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAAC...........................2112.00200100010000
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAACTTC-CG.....................2612.00211000000000
..............................A--ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2312.00201100000000
....................................................................................................................................................................................................................................CTTACCCCGAGAACTTC-CGGGC..................2212.00201100000000
............................CGA--ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2512.00202000000000
.....................TAAACGGCGA--ATCCACCATGGTGAAAG...........................................................................................................................................................................................................................2712.00200100010000
..............................................................................................................................................................................................................................................GAACTTC-CGGGCCTACAAGGCGCT......2412.00201010000000
.............................GA--ATCCACCATGGTGAAAG...........................................................................................................................................................................................................................1912.00201100000000
.............AGACGACTTAAACGGCGA--............................................................................................................................................................................................................................................1811.00101000000000
......................................................................................................................................................................................................................................TACCCCGAGAACTTC-CGGGCCTACA.............2511.00100100000000
...........................................................................................................................................................................................................................CTCTGTACACTTACCCCGAGAA............................2211.00100100000000
...............................................................................................................................................................................................................AATATTTGCAGACTCTGTACACTTAC....................................2611.00100100000000
...................CTTAAACGGCGA--ATCCACCATGGT................................................................................................................................................................................................................................2411.00101000000000
..........................GGCGA--ATCCACCATGGTGAAAG...........................................................................................................................................................................................................................2211.00100000100000
...........................................................................................................................................................................................................................................CGAGAACTTC-CGGGCCTACA.............2011.00101000000000
......................................................................................................................................................................................................................................TACCCCGAGAACTTC-CGGGCC.................2111.00100100000000
.................................................................................................................................................................................................................................ACACTTACCCCGAGAACTTC-CGGGC..................2511.00101000000000
...........................................................................................................................................................................................................................CTCTGTACACTTACCCCGAGAACT..........................2411.00100100000000
.................................ATCCACCATGGTGAAAGGAAC.......................................................................................................................................................................................................................2111.00100100000000
..........................................................................................................................................................................................................................ACTCTGTACACTTACCCCGAG..............................2111.00100100000000
................CGACTTAAACGGCGA--ATCCACCAT...................................................................................................................................................................................................................................2411.00101000000000
.......................AACGGCGA--ATCCACCATGGTGAAAGG..........................................................................................................................................................................................................................2611.00100000010000
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGA.............................2011.00100100000000
..........................GGCGA--ATCCACCATGGTGAAAGGAAC.......................................................................................................................................................................................................................2611.00100000010000
........................ACGGCGA--ATCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2911.00100000010000
.....................................................................................................................................................................................................................................TTACCCCGAGAACTTC-CGGGCCTACAAGG..........2911.00100100000000
.................................................................................................................................................................................................................................................CTTC-CGGGCCTACAAGGCGCTC.....2211.00110000000000
................................................................................................................................................................................................................................TACACTTACCCCGAGAACTTC-CGG....................2411.00101000000000
.................................ATCCACCATGGTGAAAGGA.........................................................................................................................................................................................................................1911.00101000000000
......................................................................................................................................................................................................................................TACCCCGAGAACTTC-CGGGCCT................2211.00100100000000
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGAA............................2111.00110000000000
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGA.............................1911.00101000000000
.............................................................................................................................................................................................................................................AGAACTTC-CGGGCCTACAA............1911.00101000000000
..............................................................................................................................................................................................................................................GAACTTC-CGGGCCTACAAGGCGCTC.....2511.00100100000000
..........................................................................................................................................................................................................................ACTCTGTACACTTACCCCGAGA.............................2211.00100100000000
...................................................................................................................................................................................................................................ACTTACCCCGAGAACTTC-C......................1911.00100100000000
..............................................................................................................................................................................................................................................GAACTTC-CGGGCCTACAAGGCGCC......2411.00100100000000
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGAACT..........................2311.00101000000000
.............AGACGACTTAAACGGCGA--ATCC........................................................................................................................................................................................................................................2211.00100100000000
............................................................................................................................................................................................................................TCTGTACACTTACCCCGAGAACTTC-C......................2611.00101000000000
...............................................................................................................................................................................................................................GTACACTTACCCCGAGAACTTC-CGGGC..................2711.00100100000000
.........................CGGCGA--ATCCACCATGGT................................................................................................................................................................................................................................1811.00100100000000
..............................................................................................................................................................................................................................................GAACTTC-CGGGCCTACAA............1811.00101000000000
.....................TAAACGGCGA--ATCCACCATGGTGAAA............................................................................................................................................................................................................................2611.00101000000000
...................................................................................................................................................................................................................................ACTTACCCCGAGAACTTC-CG.....................2011.00100001000000
...........GCAGACGACTTAAACGGCGA--AT..........................................................................................................................................................................................................................................2211.00100000010000
................................................................................................................................................................................................................................................ACTTC-CGGGCCTACAAGGCGCTC.....2311.00100100000000
..........................................................................................................................................................................................................................................CCGAGAACTTC-CGGGCCTACAAGGCG........2611.00100100000000
...........................GCGA--ATCCACCATGGTGAAAGGAA........................................................................................................................................................................................................................2411.00101000000000
..........GGCAGACGACTTAAACGGCG...............................................................................................................................................................................................................................................2011.00101000000000
.............AGACGACTTAAACGGCGA--ATCCACCATGG.................................................................................................................................................................................................................................2911.00100100000000
..................................TCCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................2111.00100100000000
........................ACGGCGA--ATCCACCATGGTGAAAGGAA........................................................................................................................................................................................................................2711.00100000010000
.............................................................................................................................................................................................................................................AGAACTTC-CGGGCCTACA.............1811.00110000000000
...............................................................................................................................................................................................................................................AACTTC-CGGGCCTACAAGGCGCT......2311.00101000000000
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAACTTC-CGGGC..................2911.00100100000000
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAACTTC-C......................2511.00100100000000
.............................GA--ATCCACCATGGTGAAAGGAACC......................................................................................................................................................................................................................2411.00100100000000
..............................A--ATCCACCATGGTGAAAGGAAC.......................................................................................................................................................................................................................2211.00100100000000
........................ACGGCGA--ATCCACCATGGTGAAAG...........................................................................................................................................................................................................................2411.00100000010000
....................TTAAACGGCGA--ATCCACCATGGTGAAA............................................................................................................................................................................................................................2711.00101000000000
.................................................................................................................................................................................................................................ACACTTACCCCGAGAACTTC-CGGGCC.................2611.00100100000000
...................CTTAAACGGCGA--ATCCACC.....................................................................................................................................................................................................................................1911.00100100000000
..............GACGACTTAAACGGCGA--ATCCACC.....................................................................................................................................................................................................................................2411.00100100000000
..........GGCAGACGACTTAAACGGCGA--AT..........................................................................................................................................................................................................................................2311.00100100000000
...................................CCACCATGGTGAAAGGAACT......................................................................................................................................................................................................................20100.10101000000000
droEug1
TATATTTGTAGGCAGACGATTTAAACGGCGA--ATCCACCATGGTGCAAGGAGTACGTAAATATGCCAGGAATA-CAGATTTGCAAA-T--CCGTGGCGTTGGTCGATGAAAATTTGCGAATTTG-------CGAGTGCCGGTTA---TGTGCCACGATTTAATGCTTATCTTC-----------ATGT----------------TTGGTTTTTGCAGACTCTGTACACTTATCCCGAGAACTTC-CGGGCCTACAAGGCTCTTATTGCSizeHit CountTotal NormTotal
No Reads
droBia1
CGTATTTGCAGGCAGACGATTTAAACGGCGA--ATCCACCATGGTGCAAGGAGTACGTACACCCGTGGGCAGTG-GGGATTTGCCAA-T--CCGTGGCGCTGGGCCATGTGAATTTGCAAATTTG-------CCAATGCCGGCTA---GGTGCCACGACTT-TCGCTAATCTGCC------TTC------TCT----------TC---GGTTTTGCAGACTCTGTACACTTACCCCGAGAACTTC-CGGGCCTACAAGGCGCTGATTGCSizeHit CountTotal NormTotal
No Reads
droTak1
CATATTTGCAGGCAGACGATTTAAACGGCGA--ATCCACAATGGTGCAAGGAGTGAGTACGCGCGGGAGGAGTG-GAAATTTGCCAA-T--CCTAGGCCTTGGGCCAAGTGAATTTGCGAATTTT-------CAAATGCCGGTTATGTGCTGCCACGACTT-TTGCTAATTTTTC------CTC------ATA----------TC---TTTTTCGCAGACTCTGTACACTTATCCCGAGAACTTC-CGGGCCTACAAGGCGCTCATTGCSizeHit CountTotal NormTotal
No Reads
droEle1
TATATTTGTAGGCAGACGTTTTAAACGGCGA--ATCCACCATGGTGCAAGGAGTACGTAAATGAAAGCGGTATG-CAAATTCGCCGA-AAGCAGCTGCTCGAGGCCATGTGAATTGGCGAATTTG-------CAAATGCCGGTTAAAAGGTGCCACGACAC-ATACTAATTCAGA------TTG------ACT------------TGATTGTTTGCAGACTCTGTACACTTATCCCGAGAACTTC-CGCGCGTACAAGGCGCTCATTGCSizeHit CountTotal NormTotal
No Reads
droRho1
TATATTTGTAGGCAGACGATTTAAACGGCGA--ATCCACCATGGTGCAAGGAGTACGTTAATAAATTCGGTGTG-CAAATTTGCAAAAAAACAGCTGTTTGAGGCCATGTGAATTTGCGAATTTG-------CAAATGCCGGTTA---GGTGCCACGACTT-CTACTAATTTTGA------TTG----------------------ACATGTTTGCAGACTCTGTACACTTATCCCGAGAACTTC-CGCGCGTACAAGGCGCTCATTGCSizeHit CountTotal NormTotal
No Reads
droFic1
TACATTTGTAGGCAGACGATTTAAACGGCGA--ATCCACCATGGTGCAAGGAGTACGTAGACACAAAAGCACTGCAAAATTTACTAA-T--CTG-GGCCTTGCGCCATGCGAATTTGCGAATTTT-------CAAAAGCCGGTTT---GGTGCCACGACAT-TTACTAATTTGCC------CT--ATATCTTA----------TC---TTATTGGCAGACTCTGTACACTTATCCCGAGAACTTC-CGCGCGTACAAGGCGCTCATCGCSizeHit CountTotal NormTotal
No Reads
droKik1
-------------------------CGGCGAA-AAACACGATGGTGCAAGGAGTGCGTATAAAAGATTTAGGCA-AAAATCTAAAAA-TATCAGCGCGATCGCGTCCTGTTTATTTGCGAATCCTTGCTGGCCGCTCGCCCAGGA---TGTGCTTGG-CCCGATGCTAATCA------AAGCTCTT------TC-----------CGTTTGATTCCAGACGCTGTACACTTACCCCGAGAACTTC-CGCGCGTACAAGGCGCTCATCGCSizeHit CountTotal NormTotal
No Reads
droAna3
-------------------------CGGCGAAAATCCACGATGGTGCAAGGAGTACGTATAAAAAATGGCTTTA-AAAATTCGCAAA-TTCCAACGCAATCACGGCATGATAATTCGCGAATTCTTTCTCGGCACACGCCGAAAA---GATCCAAAAACCCGATACTAATTATC-TTT--------TGTT-----TGCTACTATC---GTAATTTCAGACGCTGTACACTTACCCCGAGAACTTC-CGCGCGTACAAGGCCCTCATCGCSizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
......................................................................................................................................................................................................................................TACCCCGAGAACTTC-CGCGCGTACAA............2613.003020010
.............................GAAAATCCACGATGGTGCAAGGA.........................................................................................................................................................................................................................2313.003020001
..........................................................................................................................................................................................................................ACGCTGTACACTTACCCCGAGAA............................2313.003210000
.............................GAAAATCCACGATGGTGCAAGGAAC.......................................................................................................................................................................................................................2513.003030000
............................................................................................................................................................................................................................................GAGAACTTC-CGCGCGTACA.............1913.003200001
..........................................................................................................................................................................................................................ACGCTGTACACTTACCCCGAGA.............................2212.002020000
................................................................................................................................................................................................................................................ACTTC-CGCGCGTACAAGGC.........1912.002020000
............................................................................................................................................................................................................................GCTGTACACTTACCCCGAGAAC...........................2212.002020000
............................................................................................................................................................................................................................GCTGTACACTTACCCCGAG..............................1912.002020000
...........................................................................................................................................................................................................................CGCTGTACACTTACCCCGA...............................1912.002110000
...................................................................................................................................................................................................................................................TC-CGCGCGTACAAGGCCCTCA....2112.002100001
..............................................................................................................................................................................................................................................GAACTTC-CGCGCGTACAAG...........1912.002110000
............................................................................................................................................................................................................................................GAGAACTTC-CGCGCGTACAAG...........2112.002200000
.....................................................................................................................................................................................................................................TTACCCCGAGAACTTC-CGCGC..................2112.002020000
............................................................................................................................................................................................................................................GAGAACTTC-CGCGCGTACAA............2012.002110000
............................................................................................................................................................................................................................GCTGTACACTTACCCCGAGAA............................2112.002110000
............................................................................................................................................................................................................................GCTGTACACTTACCCCGAGA.............................2012.002110000
...........................................................................................................................................................................................................................CGCTGTACACTTACCCCGAGA.............................2111.001010000
....................................................................................................................................................................................................................................CTTACCCCGAGAACTTC-CGCGC..................2211.001010000
...............................AAATCCACGATGGTGCAAGGAA........................................................................................................................................................................................................................2211.001010000
...........................................................................................................................................................................................................................................CGAGAACTTC-CGCGCGTACA.............2011.001000001
...................................................................................................................................................................................................................................ACTTACCCCGAGAACTTC-CGCGCGT................2511.001100000
...........................................................................................................................................................................................................................................CGAGAACTTC-CGCGCGTACAAGGC.........2411.001000010
..........................................................................................................................................................................................................................ACGCTGTACACTTACCCCGAGAACTTC-.......................2711.001010000
.............................................................................................................................................................................................................................................AGAACTTC-CGCGCGTACAA............1911.001000010
.............................................................................................................................................................................................................................................AGAACTTC-CGCGCGTACAAGGC.........2211.001100000
................................AATCCACGATGGTGCAAGGA.........................................................................................................................................................................................................................2011.001010000
....................................CACGATGGTGCAAGGAGTACG....................................................................................................................................................................................................................2111.001000001
..............................................................................................................................................................................................................................................GAACTTC-CGCGCGTACAAGGCCCTCATC..2811.001000010
......................................................................................................................................................................................................................................................CGCGCGTACAAGGCCCTCATC..2111.001100000
...............................................................................................................................................................................................................................GTACACTTACCCCGAGAACTTC-CGCGCG.................2811.001010000
................................................................................................................................................................................................................................................ACTTC-CGCGCGTACAAGGCCC.......2111.001100000
...............................................................................................................................................................................................................................GTACACTTACCCCGAGAACTTC-CG.....................2411.001000001
...............................................................................................................................................................................................................................................AACTTC-CGCGCGTACAAGGCC........2111.001010000
..........................................................................................................................................................................................................................ACGCTGTACACTTACCCCGA...............................2011.001010000
...............................................................................................................................................................................................................................................AACTTC-CGCGCGTACAAGGCCCT......2311.001010000
......................................................................................................................................................................................................................................TACCCCGAGAACTTC-CGCGC..................2011.001000010
..........................................................................................................................................................................................................................ACGCTGTACACTTACCCCGAGAACT..........................2511.001100000
................................................................................................................................................................................................................................................ACTTC-CGCGCGTACAAGGCCCTCA....2411.001100000
...............................................................................................................................................................................................................................................AACTTC-CGCGCGTACAAG...........1811.001010000
...............................................................................................................................................................................................................................................AACTTC-CGCGCGTACAAGGCCCTCAT...2611.001100000
..............................................................................................................................................................................................................................................GAACTTC-CGCGCGTACAAGGCCCTCAT...2711.001000001
...............................................................................................................................................................................................................................................AACTTC-CGCGCGTACAAGGCCCTCA....2511.001100000
...............................................................................................................................................................................................................................GTACACTTACCCCGAGAAC...........................1911.001010000
..................................................................................................................................................................................................................................................TTC-CGCGCGTACAAGGCCCTCATCGC2611.001100000
.......................................................................................................................................................................................................................................ACCCCGAGAACTTC-CGCGCGTA...............2211.001000010
...........................................................................................................................................................................................................................CGCTGTACACTTACCCCGAGAACTTC-CG.....................2811.001000001
....................................................................................................................................................................................................................................CTTACCCCGAGAACTTC-CGCGCGT................2411.001010000
....................................................................................................................................................................................................................................CTTACCCCGAGAACTTC-CGCGCGTACA.............2711.001000010
............................................................................................................................................................................................................................GCTGTACACTTACCCCGAGAACTTC-.......................2511.001010000
............................CGAAAATCCACGATGGTGCAAGGAACG......................................................................................................................................................................................................................2711.001100000
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAACTTC-CG.....................2611.001100000
..............................................................................................................................................................................................................................................GAACTTC-CGCGCGTACAAGG..........2011.001010000
..........................................GGTGCAAGGAGTACGTATAAAA.............................................................................................................................................................................................................2211.001100000
..........................................................................................................................................................................................................................ACGCTGTACACTTACCCCGAC..............................2111.001010000
..................................TCCACGATGGTGCAAGGAGTACG....................................................................................................................................................................................................................2311.001000001
.............................................................................................................................................................................................................................CTGTACACTTACCCCGAGAACTTC-C......................2511.001100000
................................................................................................................................................................................................................................................ACTTC-CGCGCGTACAAGGCCCT......2211.001000100
...............................................................................................................................................................................................................................GTACACTTACCCCGAGAACTTC-CGCGC..................2711.001010000
...........................................................................................................................................................................................................................CGCTGTACACTTACCCCGAG..............................2011.001100000
...................................................................................................................................................................................................................................................TC-CGCGCGTACAAGGCCCTCATCGC2511.001010000
.............................GAAAATCCACGATGGTGCAAG...........................................................................................................................................................................................................................2111.001010000
...............................AAATCCACGATGGTGCAAGG..........................................................................................................................................................................................................................2011.001010000
....................................................................................................................................................................................................................................CTTACCCCGAGAACTTC-CGCGCGTAC..............2611.001100000
............................CGAAAATCCACGATGGTGCAAGG..........................................................................................................................................................................................................................2311.001100000
..................................................................................................................................................................................................................................................TTC-CGCGCGTACAAGGCCC.......1911.001100000
..........................GGCGAAAATCCACGATGGTGCAAG...........................................................................................................................................................................................................................2411.001100000
...................................................................................................................................................................................................................................ACTTACCCCGAGAACTTC-CGCGCGTAC..............2711.001010000
............................CGAAAATCCACGATGGTGCAAGGAA........................................................................................................................................................................................................................2511.001001000
...........................................................................................................................................................................................................................................CGAGAACTTC-CGCGCGTACAAG...........2211.001100000
droBip1
-------------------------CGGCGAAAATCCACGATGGTGCAAGGAGTACGTATGAAAAACGGTTTTA-ATAATTCGCAAA-TTATAGCGCAATCACGGCATGATAATTTGCGAATTTCTTCTCGGCAGACGCCGATAA---GATCGAAAAACCCGATACTAATTATC-TTT--------TGTT-----TGCTATTGCC---GTACTTGTAGACGCTGTACACTTACCCCGAGAACTTC-CGCGCGTACAAGGCGCTCATCGCSizeHit CountTotal NormTotal
No Reads
dp5
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGCAGACACTTTACACTTACCCCGAGAACTTC-CGCGCGTACAAGGCGCTGATTGCSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................ACTTC-CGCGCGTACAAGGC.........1913.0030010200000
..............................................................................................................................................................................................................................................GAACTTC-CGCGCGTACAAGG..........2013.0030300000000
.............................................................................................................................................................................................................................................AGAACTTC-CGCGCGTACAAGGC.........2213.0030110100000
................................................................................................................................................................................................................................TACACTTACCCCGAGAACTTC-CGCGCG.................2712.0020200000000
..............................................................................................................................................................................................................................................GAACTTC-CGCGCGTACAAGGC.........2112.0020200000000
..............................................................................................................................................................................................................................................GAACTTC-CGCGCGTACAAGGCGCT......2412.0020100100000
...........................................................................................................................................................................................................................................CGAGAACTTC-CGCGCGTACA.............2012.0020000011000
.................................................................................................................................................................................................................................ACACTTACCCCGAGAACTTC-CGCGC..................2511.0010100000000
...............................................................................................................................................................................................................................................AACTTC-CGCGCGTACAAGG..........1911.0010100000000
..............................................................................................................................................................................................................................................GAACTTC-CGCGCGTACAAG...........1911.0010100000000
............................................................................................................................................................................................................................................GAGAACTTC-CGCGCGTACAAGG..........2211.0010100000000
............................................................................................................................................................................................................................................GAGAACTTC-CGCGCGTACAAGGC.........2311.0010100000000
...............................................................................................................................................................................................................................TTACACTTACCCCGAGAACTTC-CGCG...................2611.0010100000000
..........................................................................................................................................................................................................................................CCGAGAACTTC-CGCGCGTACA.............2111.0010000001000
..........................................................................................................................................................................................................................ACACTTTACACTTACCCCGA...............................2011.0010100000000
...........................................................................................................................................................................................................................CACTTTACACTTACCCCGAG..............................2011.0010100000000
................................................................................................................................................................................................................................TACACTTACCCCGAGAACTTC-CGCGC..................2611.0010100000000
.............................................................................................................................................................................................................................................AGAACTTC-CGCGCGTACAAGG..........2111.0010000100000
............................................................................................................................................................................................................................................GAGAACTTC-CGCGCGTACA.............1911.0010100000000
.............................................................................................................................................................................................................................................AGAACTTC-CGCGCGTACAAGGCGCT......2511.0010000100000
............................................................................................................................................................................................................................................GAGAACTTC-CGCGCGTACAAG...........2111.0010100000000
.............................................................................................................................................................................................................................................AGAACTTC-CGCGCGTACAAGGCGCC......2511.0010010000000
.............................................................................................................................................................................................................................................AGAACTTC-CGCGCGTACAA............1911.0010100000000
.................................................................................................................................................................................................................................................CTTC-CGCGCGTACAAGGCGCT......2111.0010100000000
droPer2
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGCAGACACTTTACACTTACCCCGAGAACTTCCCGCGCGTACAAGGCGCTGATTGCSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
...........................................................................................................................................................................................................................CACTTTACACTTACCCCGA...............................1911.001001000
..................................................................................................................................................................................................................AATTGCAGACACTTTACACTTACCCCGG...............................2811.001100000
..........................................................................................................................................................................................................................................................CGTACAAGGCGCTGATTGC1911.001001000
droWil2
CGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGCAGACACTTTACACTTACCCTGAAAACTTC-CGCGCTTACAAGGCCCTTATTGCSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
....................................................................................................................................................................................................................................CTTACCCTGAAAACTTC-CGC....................2012.00201010
.....................................................................................................................................................................................................................................TTACCCTGAAAACTTC-CGCGC..................2112.00200020
..............................................................................................................................................................................................................................................AAACTTC-CGCGCTTACAAG...........1912.00200020
..........................................................................................................................................................................................................................................CTGAAAACTTC-CGCGCTTACAAG...........2312.00201010
...............................................................................................................................................................................................................................................AACTTC-CGCGCTTACAAGG..........1912.00201010
..................................................................................................................................................................................................................................CACTTACCCTGAAAACTTC-CGCG...................2311.00101000
................................................................................................................................................................................................................................................ACTTC-CGCGCTTACAAGG..........1811.00100010
................................................................................................................................................................................................................................TACACTTACCCTGAAAACTTC-CGC....................2411.00100010
........................................................................................................................................................................................................................................CCCTGAAAACTTC-CGCGCTTA...............2111.00100010
..........................................................................................................................................................................................................................ACACTTTACACTTACCCTG................................1911.00110000
...............................................................................................................................................................................................................................................AACTTC-CGCGCTTACAAG...........1811.00100010
..............................................................................................................................................................................................................................................AAACTTC-CGCGCTTACAA............1811.00100010
................................................................................................................................................................................................................................................ACTTC-CGCGCTTACAAGGC.........1911.00100010
................................................................................................................................................................................................................................TACACTTACCCTGAAAACTTC-CGCGCT.................2711.00101000
....................................................................................................................................................................................................................................CTTACCCTGAAAACTTC-CGCGC..................2211.00100100
......................................................................................................................................................................................................................................TACCCTGAAAACTTC-CGCGC..................2011.00100010
............................................................................................................................................................................................................................................GAAAACTTC-CGCGCTTACAAG...........2111.00100010
....................................................................................................................................................................................................................................CTTACCCTGAAAACTTC-CG.....................1911.00100010
.............................................................................................................................................................................................................................................AAAACTTC-CGCGCTTACAAG...........2011.00100010
...................................................................................................................................................................................................................................ACTTACCCTGAAAACTTC-CGCGC..................2311.00101000
............................................................................................................................................................................................................................................GAAAACTTC-CGCGCTTACAAGGCCCT......2611.00101000
droVir3
CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGTAATTGCAGACGCTTTACACTTATCCCGAGAACTTC-CGCGCATACAAGGCACTTATTGCSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
.......................................................................................................................................................................................................................................ATCCCGAGAACTTC-CGCGC..................1914.004000000000002000100100000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TTACACTTATCCCGAGAACTTC-CGCGC..................2714.004000000000000000000001000000000000100000100000000000000000000010
..........................................................................................................................................................................................................................ACGCTTTACACTTATCCCGA...............................2013.003000100000000010000100000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TATCCCGAGAACTTC-CGCGCA.................2113.003001000000000000000000000100000000000000000000000000000000001000
......................................................................................................................................................................................................................................TATCCCGAGAACTTC-CGCGC..................2013.003000000000000000000000000000001000000000000000000000000000002000
.............................................................................................................................................................................................................................................AGAACTTC-CGCGCATACAAGG..........2112.002002000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TTACACTTATCCCGAGAACT..........................2012.002000000000000001000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................TATCCCGAGAACTTC-CGCG...................1912.002000000000000000101000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................ACTTC-CGCGCATACAAGG..........1812.002001100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TTATCCCGAGAACTTC-CGCGC..................2112.002000000000000000200000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................AGAACTTC-CGCGCATACAAG...........2012.002001000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................ACGCTTTACACTTATCCCGAGAAC...........................2411.001000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................ACTTATCCCGAGAACTTC-CGC....................2111.001000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................................................................................................GAGAACTTC-CGCGCATACAA............2011.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................TATCCCGAGAACTTC-CGCGCAT................2211.001000000000000000000000000000000000000000000000000000000000000100
..............................................................................................................................................................................................................................TTTACACTTATCCCGAGAACTTC-CGCGC..................2811.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................GAACTTC-CGCGCATACAA............1811.001000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................CACTTATCCCGAGAACTTC-CGCG...................2311.001000000000000000000100000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TACACTTATCCCGAGAACTTC-CGCGC..................2611.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................GCTTTACACTTATCCCGAGAACTT.........................2411.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GCATACAAGGCACTTATTGC2011.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CCCGAGAACTTC-CGCGCATAC..............2111.001000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................................TTTACACTTATCCCGAGAA............................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CCCGAGAACTTC-CGCGCAT................1911.001000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CCGAGAACTTC-CGCGCATACA.............2111.001000000000000000000000000000000000000000000000000000000000000001
.................................................................................................................................................................................................................................ACACTTATCCCGAGAACT..........................1811.001000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................TTACACTTATCCCGAGAACTTC-CGCG...................2611.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................CTTTACACTTATCCCGAGAACTT.........................2311.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TTTACACTTATCCCGAGAAC...........................2011.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TTACACTTATCCCGAGAACTTC-CGC....................2511.001000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................ACTTATCCCGAGAACTTC-CGCGC..................2311.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................GAACTTC-CGCGCATACAAGGCACTT.....2511.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TATCCCGAGAACTTC-CGCGCATACA.............2511.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................CACTTATCCCGAGAACTTC-CGC....................2211.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................TACACTTATCCCGAGAACTTC-CGCGCAT................2811.001000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TTTACACTTATCCCGAGAACTT.........................2211.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TTC-CGCGCATACAAGGCACTTATT..2411.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CCGAGAACTTC-CGCGCA.................1711.001000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................CTTTACACTTATCCCGAGAACTTC-CGCGC..................2911.001000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................GAGAACTTC-CGCGCATACAAG...........2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................GCTTTACACTTATCCCGAGAA............................2111.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CTTC-CGCGCATACAAGGCACT......2111.001000000000000000000100000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................CTTTACACTTATCCCGAGAAC...........................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................AATTGCAGACGCTTTACACTT......................................2111.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................TTACACTTATCCCGAGAACTTC-.......................2211.001000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................TCCCGAGAACTTC-CGCGCA.................1911.001000000000000000000000000000000000001000000000000000000000000000
.............................................................................................................................................................................................................................................AGAACTTC-CGCGCATACAAGGC.........2211.001000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TATCCCGAGAACTTC-CGCGCATA...............2311.001000000000000000000010000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TTTACACTTATCCCGAGAACTTC-CGCGCA.................2911.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CCGAGAACTTC-CGCGC..................1611.001000000000000000000000000000000000000000000000000000000000000001
...............................................................................................................................................................................................................................................AACTTC-CGCGCATACAAG...........1811.001000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................CTTATCCCGAGAACTTC-CGCGCATACA.............2711.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................GAACTTC-CGCGCATACAAG...........1911.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TACACTTATCCCGAGAACTTC-CGC....................2411.001000000000000000000100000000000000000000000000000000000000000000
droMoj3
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGTAGACACTTTACACTTATCCCGAGAACTTC-CGCGCATACAAGGCCCTCATCGCSizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
......................................................................................................................................................................................................................................................CGCGCATACAAGGCCCTCATCGC2317.007700000
.........................................................................................................................................................................................................................................................GCATACAAGGCCCTCATCGC2013.003300000
....................................................................................................................................................................................................................................CTTATCCCGAGAACTTC-C......................1812.002200000
...............................................................................................................................................................................................................................TTACACTTATCCCGAGAACTTC-C......................2312.002100001
.............................................................................................................................................................................................................................................AGAACTTC-CGCGCATACAA............1912.002200000
.............................................................................................................................................................................................................................................AGAACTTC-CGCGCATACAAGGC.........2212.002200000
..............................................................................................................................................................................................................................TTTACACTTATCCCGAGAACTTC-CGCGC..................2811.001100000
.............................................................................................................................................................................................................................................AGAACTTC-CGCGCATACAAGGCCCT......2511.001100000
...............................................................................................................................................................................................................................TTACACTTATCCCGAGAACTTC-.......................2211.001100000
..........................................................................................................................................................................................................................ACACTTTACACTTATCCCGAGA.............................2211.001100000
...............................................................................................................................................................................................................................TTACACTTATCCCGAGAACTTC-CGCGC..................2711.001100000
...............................................................................................................................................................................................................................................AACTTC-CGCGCATACAAGGCCCTCATCGC2911.001100000
.............................................................................................................................................................................................................................................AGAACTTC-CGCGCATACAAGG..........2111.001100000
............................................................................................................................................................................................................................ACTTTACACTTATCCCGAGAACTTC-C......................2611.001100000
.......................................................................................................................................................................................................................................................GCGCATACAAGGCCCTCATCGC2211.001100000
............................................................................................................................................................................................................................................GAGAACTTC-CGCGCATACAA............2011.001100000
.....................................................................................................................................................................................................................................TTATCCCGAGAACTTC-CGCGC..................2111.001100000
....................................................................................................................................................................................................................................CTTATCCCGAGAACTTC-CGCGCAT................2411.001000010
....................................................................................................................................................................................................................................CTTATCCCGAGAACTTC-CGCGC..................2211.001100000
.....................................................................................................................................................................................................................................TTATCCCGAGAACTTC-CGCG...................2011.001100000
..............................................................................................................................................................................................................................................GAACTTC-CGCGCATACAAGGCC........2211.001100000
......................................................................................................................................................................................................................................TATCCCGAGAACTTC-CGCGC..................2011.001000001
.............................................................................................................................................................................................................................CTTTACACTTATCCCGAGAACTTC-CGCGC..................2911.001100000
..........................................................................................................................................................................................................................................................CATACAAGGCCCTCATCGC1911.001100000
............................................................................................................................................................................................................................................GAGAACTTC-CGCGCATACAAGGC.........2311.001100000
......................................................................................................................................................................................................................................................CGCGCATACAAGGCCCTCATC..2111.001100000
...............................................................................................................................................................................................................................TTACACTTATCCCGAGAACT..........................2011.001100000
...............................................................................................................................................................................................................................TTACACTTATCCCGAGAACTT.........................2111.001100000
..............................................................................................................................................................................................................................................GAACTTC-CGCGCATACAAGGCCCTC.....2511.001100000
..................................................................................................................................................................................................................................CACTTATCCCGAGAACTTC-.......................1911.001000010
...................................................................................................................................................................................................................................................TC-CGCGCATACAAGGCCCTCA....2111.001100000
..........................................................................................................................................................................................................................ACACTTTACACTTATCCCGAG..............................2111.001100000
..................................................................................................................................................................................................................................CACTTATCCCGAGAACTTC-CGCGCA.................2511.001000001
..............................................................................................................................................................................................................................................GAACTTC-CGCGCATACAAG...........1911.001100000
.....................................................................................................................................................................................................................................TTATCCCGAGAACTTC-CGCGCATACA.............2611.001100000
..........................................................................................................................................................................................................................ACACTTTACACTTATCCCGA...............................2011.001100000
................................................................................................................................................................................................................................................ACTTC-CGCGCATACAAGGCCC.......2111.001100000
...............................................................................................................................................................................................................................................AACTTC-CGCGCATACAAGGCC........2111.001100000
..................................................................................................................................................................................................................................CACTTATCCCGAGAACTTC-CGCGCATAC..............2811.001000001
............................................................................................................................................................................................................................ACTTTACACTTATCCCGAGA.............................2011.001100000
..............................................................................................................................................................................................................................................GAACTTC-CGCGCATACAAGGCCCT......2411.001100000
droGri2
-------------------------------------------------------------------------------------------------------------------------------------------------------------ATCT---------------CTCAACTATC------AAA----------TTTATAATTACAGACGCTTTACACTTATCCCGAGAACTTC-CGCGCGTACAAAGCCCTCATTGCSizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
....................................................................................................................................................................................................................................CTTATCCCGAGAACTTC-CG.....................1912.00220
.................................................................................................................................................................................................................................ACACTTATCCCGAGAACT..........................1812.00220
.................................................................................................................................................................................................................................ACACTTATCCCGAGAACTTC-CGCGCGTA...............2812.00211
.................................................................................................................................................................................................................................ACACTTATCCCGAGAACTTC-C......................2112.00211
......................................................................................................................................................................................................................................TATCCCGAGAACTTC-CGCGCGT................2211.00110
....................................................................................................................................................................................................................................CTTATCCCGAGAACTTC-CGCGCGTA...............2511.00101
...................................................................................................................................................................................................................................................TC-CGCGCGTACAAAGCCCTC.....2011.00101
............................................................................................................................................................................................................................................GAGAACTTC-CGCGCGTACAAAG..........2211.00101
.......................................................................................................................................................................................................................................ATCCCGAGAACTTC-CGCGCGTACAA............2511.00110
..........................................................................................................................................................................................................................ACGCTTTACACTTATCCC.................................1811.00110
..................................................................................................................................................................................................................................CACTTATCCCGAGAACTTC-CGCGCGTG...............2711.00101
........................................................................................................................................................................................................................................TCCCGAGAACTTC-CGCGCG.................1911.00101
.................................................................................................................................................................................................................................ACACTTATCCCGAGAACTTC-CG.....................2211.00101
....................................................................................................................................................................................................................................................C-CGCGCGTACAAAGCCCT......1811.00110
...................................................................................................................................................................................................................................ACTTATCCCGAGAACTTC-CG.....................2011.00110
....................................................................................................................................................................................................................................CTTATCCCGAGAACTTC-CGCGCGTAC..............2611.00101
.......................................................................................................................................................................................................................................ATCCCGAGAACTTC-CGCGCG.................2011.00101
....................................................................................................................................................................................................................................CTTATCCCGAGAACTTC-CGCGCG.................2311.00110
.................................................................................................................................................................................................................................ACACTTATCCCGAGAACTT.........................1911.00110

Generated: 05/18/2015 at 09:58 PM