ID:

dsi_24558

 Coordinate:

3l:8775178-8775335 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.1 -16.1 -15.5 -15.5

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TATTTATTAATTTATAATTTTCACCTTTGCTCGCGCGCGCGTGTGTGTGAGTGCGTATGTGTGTACTTTTTATTAGCACTTTTGGGCTTTAGCGTTGTTGTTTTTGCTAAACCATTACTTTTTTTTAGACACACATTTCATGGCGCTTCCGCTCACAAACGCCTGATTACTGAGTACTGCGCACGGCTGCTGTTGCACTTGGTCGGATGCATGTTTTCGCCAGCTAATCCATTTTTTCAGCAATTAATTAATTATTTA
*********************************************************************************************************************************...................(((.................((((((...((((.((((...)))))))))))))))))**************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 O001
Testis
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
.............................................................................................................................................................................................CTGTTGCACTTGGTCGGATGC................................................ 21 0 1 5.00 5 0 2 1 2 0 0 0 0 0
......................................................................................................................................................................................................TTGGTCGGATGCATGTTTTC........................................ 20 0 1 4.00 4 4 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................GCTGCTGTTGCACTTGGTCGG.................................................... 21 0 1 4.00 4 2 0 2 0 0 0 0 0 0
..........................................................................................................................................................................................CTGCTGTTGCACTTGGTCGGA................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0
........................................................................................................................................................................ACTGAGTACTGCGCACGGCTG..................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GTACTGCGCACGGCTGCTGTT................................................................ 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TGCTGTTGCACTTGGTCGGAT.................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TGCACTTGGTCGGATGCATGTT........................................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CTGTTGCACTTGGTCGGATTT................................................ 21 2 1 2.00 2 2 0 0 0 0 0 0 0 0
.........................................................................TAGCACTTATGGGATTTAGC..................................................................................................................................................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................CTGAGTACTGCGCACGGCTGC.................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................TTGCGCTTGGTCGGATGCAT.............................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................CTGCTGTTGCACTTGGTCGGAT.................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................CACACATTTCATGGCGCTTCC............................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................TGCTGCGCACGGCTGCTGTT................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TGCTGTTGCACTTGGTCGGATT................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................GTGCGTATGTGTGTAC................................................................................................................................................................................................ 16 0 1 1.00 1 0 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................CTGCTGTTGCACTTGGTCGGATA................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TTGCACTTGGTCGGATGCATA............................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................AACGCCTGATTACTGAGTACT................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................TTACTGAGTACTGCGCACGGC....................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................TGTTGCACTTGGTCGGATGC................................................ 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................GCTGTTGCACTTGGTCGGATG................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TACTGAGTACTGCGCACGG........................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................AGTACTGCGCACGGCTGCTGTT................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................GGCTTTAGCGTTGTTGTTTTTAA....................................................................................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................TGCTGTTGCACTTGGTCGGAAA................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CTGTTGCACTTGGTCGGATGTT............................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................GCTGTTGCACTTGGTCGGATGG................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TCGGATGCATGTTTTCGCCAGA.................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................ACTTGGTCGGATGCATGTTTT......................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TGCTGTTGCACTTGGTCGG.................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TTGCACTTGGTCGGATGCATG............................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................TTCACCTTTGCTCGCGCGCGC.......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
....................TCACCTTTGCTCGCGCGC............................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................TGCACTTGGTCGGATGCTTT............................................. 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................CACACGTTTCATGGCGCTTT............................................................................................................. 20 2 3 0.33 1 1 0 0 0 0 0 0 0 0
.........................................................................................TAGAGTTGTTGTTGTTGCTAAAA.................................................................................................................................................. 23 3 4 0.25 1 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................................................................TGCATGTTGTCGTCAGCT................................. 18 2 5 0.20 1 0 0 0 1 0 0 0 0 0
.............................................................................................GTTGTTGTTTTTGCTTAA................................................................................................................................................... 18 1 6 0.17 1 0 0 0 0 0 0 1 0 0
..................................................................................................................................................................................GCGCACGGCTGCTGTGGAAA............................................................ 20 3 11 0.09 1 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................TATTGCACTAGGTCGGA................................................... 17 2 14 0.07 1 0 0 0 0 0 0 1 0 0
...................................................................................GGGGTCTAGCGTTGTT............................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

ATAAATAATTAAATATTAAAAGTGGAAACGAGCGCGCGCGCACACACACTCACGCATACACACATGAAAAATAATCGTGAAAACCCGAAATCGCAACAACAAAAACGATTTGGTAATGAAAAAAAATCTGTGTGTAAAGTACCGCGAAGGCGAGTGTTTGCGGACTAATGACTCATGACGCGTGCCGACGACAACGTGAACCAGCCTACGTACAAAAGCGGTCGATTAGGTAAAAAAGTCGTTAATTAATTAATAAAT
****************************************************...................(((.................((((((...((((.((((...)))))))))))))))))********************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 M025
embryo
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
 GSM343915
embryo
..............................................................................................................................................................................................................TACGTACAAAAGCGGTCGATT............................... 21 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GGTCGATTAGGTAAAAAAGTC.................. 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..................................................................................................................................................AAGGCGAGTGTTTGCGGACTA........................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................ATTAGGAAAAATAGTCGTTAAGTAA......... 25 3 1 2.00 2 0 0 0 0 1 1 0 0 0 0
.............................................................................................................................................................TTGCGGACTAATGACTCATGA................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GTACAAAAGCGGTCGATTAGGTAAA........................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................TTTGCGGACTAATGACTCATG................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................ATGCGGTCGATTAGGTAAAAAA..................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................ACAAAAGCGGTCGATTAGGTA.......................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
......................................................................................................................................................................................................................AAAGCGGTCGGTTAGGTGAAA....................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AAAGCGGTCGATTAGGTAAA........................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CGGTCGGTTAGGTAAAAAAGT................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................CGAGTGTTTGCGGGCTGATGA....................................................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................AACAAAAGCGGTCGATTAGGTA.......................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GCGGTCGATTAGGTAAAAAA..................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................GGCGAGTGTTTGCGGACTAAT......................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................AGGCGAGTGTTTGCGGACTAATGACTC.................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................CGAAGGCGAGTGTTTGCGGAC............................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................AAAAATCTGTGTGTAAAGTA..................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GCGGTCGATTAGGTAAAAAAG.................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TGTTTGCGGACTAATGACTCA................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................TTGCGGGCTAATGACTCGT.................................................................................. 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................GGACTAATGACTCATGACGCGT........................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................ATGCGGTCGGTTAGGTAGAAAAG.................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CGGTCGGTTAGGTAAGGAAGT................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................ACCAGCGTAGGTACCAAAGC....................................... 20 3 5 0.20 1 0 0 0 0 0 0 0 0 1 0
...................................................................................................................ATGACAAAAAGTCTTTGTGTA.......................................................................................................................... 21 3 6 0.17 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AGGTACAAAAGCGGT.................................... 15 1 15 0.13 2 0 0 0 2 0 0 0 0 0 0
........................................................................................................................................................................................................................................AAAAAGTCGGTAATTACTT....... 19 2 9 0.11 1 0 0 0 0 0 0 0 0 1 0
........................................................................................................................................................................................................................ATTGGTCGGTTAGGTAAAAAA..................... 21 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................ACAAAAGAGGTCGATTAT............................. 18 2 10 0.10 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................................AAAAAAAATCTGTATG............................................................................................................................ 16 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0
......................................................................................GAAAGCGCAACAACTAATA......................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................AAATCTGTGTGGAATG....................................................................................................................... 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:8775128-8775385 + dsi_24558 -----TATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGCGCGCGTGTGTGTG-A-GT-----------------GCGTATGTGTGTACTTTTTATTAGCACTTTTGGGCTTTAGC----------------------GTTGTTGTTTTTGCTAAACCATTACTT----------T--TTTTTAGACACACATT----------------TCATGGCGCTTCCGC------------T-----CACAAACGCCTGATTACTGAGTACTGCGCACGGCTG---CTGTTGCACTTGGTCGGATGCAT---------GTTTTCGCCA------------------------GCT-AATCCATT--TTTTCAGCAATTAA---TTAATTATTTA----------
droSec2 scaffold_0:1261547-1261800 + -----TATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGCGCGCGTGTGTGTG-A-GT-----------------GCGTATGTGTGTACTTTTTATTAGCACTTTTGGGCTTTAGC----------------------GTTGTTGTTTTTGCTAAACCATTACTT----------T--TTTTTAGACACACATT----------------TCATGGCGCTTCCGC------------T-----CACAAACGCCTGATTACTGAGTACTGCGCACGGCTG---CTGTTGCACTTGGTCGGATGCAT---------ATTTTCGCCA------------------------GCT-AATCCATT--TTTTCAGCAATTAA---TTAATTA--------------
dm3 chr3L:8990802-8991058 + -----TATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGCGCGCGTTTGTGTG-A-GT-----------------GCGTATGTGTGTACTTTTTATTAGCACTTTTGGGCTTTAGC----------------------GTTGTTGTTTTTGCTAAACCATTACTT----------T--TTTTTAGACACACAAT----------------TCATGGCGCTTACGC------------T-----CACAAACGCCCGATTACTGAGTACTGCGCACGGTTG---CTGTTGCACTTGGTCGGATGCAT---------GTT-TCGCCA------------------------GCT-AATCCATT--TTTTCAGCAATTAA---TTAATTATTTA----------
droEre2 scaffold_4784:5049322-5049590 - -----TATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGAGAGCGTGTGTGTG-TG-T-----GTGTTTGT--GTGCGTATGTGTGTACTTTTTATTAGCACTTTTGGGCTTTAGC----------------------GTTGTTGTTTTTGTCAAACCATTACTT---------TT--TTCTTAGCCACACATT----------------TCCTGGCGCTTACGC------------T-----CACAAACGCCCGATTACTGAGTACTGCGCACGACTG---CTGTTGCACTTAGTCGAATGCAT---------GTTTTCGCCA------------------------GCT-AATCCATT--TTTTCAGCAATTAA---TTAATTATTTA----------
droYak3 3L:2922070-2922342 - -----TATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGCGCGCGTGTGTGTG-TG-TTATGTGTGTTGGT--GTGCGTATGTGTGTACTTTTTATTAGCACTTTTGGGCTTTAGC---------------------TTTTGTTGTTTTTGCTAAACCATTACT-----------T--TTTTTAGCCACACATT----------------TCCTGGCGCTCACGC------------T-----CACAAACGCCCGATTACTGAGTACTGCGCACGGCTG---CTGTTGCACTTGGTCGGATGCAT---------GTTTTCGCCA------------------------GCT-AATCCATT--TTTTCAGCAATTAA---TTAATTATTTA----------
droEug1 scf7180000409467:202234-202491 + -----CATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGCGCGTGTATGT-----------------------------GTGTGTGTACTTTTTATTAGCACTTTTGGGCTTTAGC----------------------TTTGTTGTTTTTGCTAAACCATAACT-----------T--TTTTCAGCCACACACT----------------TCCTGGCGCTCACGTTTAACGCGTT-TT-----CACAAGCGCCCGATTACGGAGTAATGCGCACGGCTG---CTGTTGCACTTGGTTGGATGCAT---------GTTTTCGCCA------------------------GCT-ATTCCATT--TTTTCAGCAATTAA---TTAATTATTTA----------
droBia1 scf7180000300910:2212328-2212608 - -----CATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGCCCGCTTGTGTGTG-TG-T-----GTGCGCGC--GAGTGTGTGTGTGTACTTTTTATTAGCACTT-TGGGCTTTAGC----------------------TTTGTTGTTTTTGCTAAACCATAACTT---A------T--TTTTTAGCCACACACA----------------GCCAGTCGCGTACGCTC-ACGTGTC-TT-----CACAAACGCCCGATTACGGAGTACTGCACTCGGCTGCTGCTGTTGCACTTGGTTGGATGCAT---------GTTTTCGCCA------------------------GCT-ATTCCATT--TTTTCAGCAATTAA---TTAACTATTTA----------
droTak1 scf7180000415356:201551-201831 - -----CATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGCGCGCCTGTGTGTG-TG-T-----GAATGTGT--GGACGTGTGTGTGTACTTTTTATTAGCACTTTTGGGCTTTAGC----------------------TTTGTTGTTTTTGCTAAACCATAACTT---AT-----T--TTTTTGGCCACACACT----------------TCCATTCGCGTACGCTCAACGTGTT-TT-----CACAATCGCCCGACTACGGAGTACTGCGCACGGCTG---CTGTTGCACTTGGTTGGATGCAT---------GTTTTCGCCA------------------------GCT-ATTCCATT--TTTTCAGCAATTAA---TTAACTATTTA----------
droEle1 scf7180000491193:3228621-3228868 + -----CATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CG----------------------------------------------GTGTACTTTTTATTAGCACTTTTGGGCTTTAGC----------------------GTTGTTGTTTTTGCTAAACCATAACTAC--ATCGC-CT--TTTTTAGCCACACACT-----------------CCAGGCGCGAACGCTCAACGTATT-TT-----CACAAACGCCCGAAAACGGATAACTGCGCACGGCTG---CTGTTGCACTTAATTAGATGCAT---------GTTTCCGCCA------------------------GCT-ATTTCATT--TTTTCAGCAGTTAA---TTAATTATTTA----------
droRho1 scf7180000777034:65072-65342 + TCGCGCATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGCGCTTGTGTGTGTG--------------------------GTGTGTGTACTTTTTATTAGCACTTTTGGGCTTTAGC----------------------TTTGTTGTTTTTGCTAAACCATAACT-----TCGC-CT--TTTTTAGCCACACACT----------------TCCATGCGCGAACACTCAACGTGTT-TT-----CACAAACGCCTGATTACGGAGAACTGCGCACGGTTG---TTGCTGCACTTAATTATATGCAT---------GTTTCCGCCA------------------------GCT-ATTTCATT--TTTTCAGCAATTAA---TTAATTATTTA----------
droFic1 scf7180000451564:108728-109006 - -----CATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGCGCGTGTGTGTGTGGTG-------GTACTGGTGTG-GTGTGTGTGTGTAT-TTTTATTAGCACTTTTGGGCTTTAGC----------------------TTTGTTGTTTTTGCTAAACCAT----------CGC-CT--TTTTTAGCCACACACT----------------TTCAGCCGAGTACAATTTACGATTT-TT-----CAAAACGGTCAGGTTACGGATAAACGCACACGGCTG---GTGTTGCATTTGGTTAGATGCAT---------GTTTTCGCCA------------------------GCT-ATTTCATT-TTTTTCAGCAATTAA---TTAATTATTTA----------
droKik1 scf7180000302486:1484229-1484510 + -----CATTTATT-AATT-----TATAATTTTCACCTTTGC------T----------ATTCCTGCGCGCGCGTATGTGTGTGGCGGT-----------------ATGGGTGTGTGTATTTTTTATTAGCACTTTTGGGCC----------------------------TTGTTGTTTTTGCTAAATCATAACTGCACATCGC-CTT-TTTTTAGCCACACACT----------------GCC-TGCGGGTTCGCGCAACGTGCT-TT-----CACAAATGCCCGGAAACGGAGAACTGCGCTCGGCCG---TTGTTGCACATAGTTGTATGCAT---------GTTTTCGCCA------------------------GCG-TTTTTAG---TTTTCAGCAAATAA---TTAATTATTAATT--------
droAna3 scaffold_13337:7660128-7660384 - -----CATTTATT-AATT-----TACAATTTTCACATTGGCTTTTGCT-----------------TGCCCGTATGTGTGTGTG----T-----------------GTGTGTGTTGGTA-TTTTTATTAGCACTTTGGGGCT-----------------------------TGTTGTTTTTGCTAAATCATAATTAC--ATCCC-C---TTTTCAGCCACACATT----------------ACC-GTCGCGATGGGCCAACGTGTTTTT-----CACAAGCGCGCGACTTCG--------------TCT-CTGCTGATGGACATA----------TTTTTT----ACTTTCCCCA------------------------GCT-ATTCCATA--TTTTCAGAAAATAAGTTTAAATTATTAA----------
droBip1 scf7180000395543:326285-326535 - -----CATTTATT-AATT-----TACAATTTTCACATTGGCTTTTGCT-----------------TGCCC----GTGTGTTTG-A----------------------GTGTGTTGGTA-TTTTTATTAGCACTTTGGGGCT-----------------------------TGTTGTTTTTGCTAAATCATAATTAC--ATCGC-C---TTTTCAGCCACACATT----------------TCC-GTCGCGATGGCCCAACGTGTTATT-----CACAAGCGCGCGACTTTG--------------GCT-CTGCTGATGGACATA----------TTTTTT----ACTTTCCCCA------------------------GCT-ATTCCATA--TTCTCAGAAAATAAGTTTAAATTATTAA----------
dp5 XR_group5:428567-428824 + -----CATTTATT-AATT-----TATAATTTTCACCTTCGC------T--------------------------------------GT-----------------ATGTGTGTGTGTATTTTTTATTAGCACTTTCTGGCTGCTGT---------------------TTTTGTTGTTTTTGCTAAATCATAACTACACATCGC-CT--TTTTTAGCCACA--TT----------------TGC-TGCGCATTGACGCAACGTGTT-TTTTTTTGCCAAG----TCGCGATAGAGAATTCCACACAACTG---CTGTTGCATGTGGTTATATGAAC---------ATTCTTGCCG------------------------TTT-ATTCCATA--TTTTCAGCAATTAA---TTAATTATTTA----------
droPer2 scaffold_67:304398-304655 - -----CATTTATT-AATT-----TATAATTTTCACCTTCGC------T--------------------------------------GT-----------------ATGTGTGTGTGTATTTTTTATTAGCACTTTCTGGCTGCTGT---------------------TTTTGTTGTTTTTGCTAAATCATAACTACACATCGC-CT--TTTTTAGCCACA--TT----------------TGC-TGCGCATTGACGCAACGTGTT-TTTTTTTGCCAAG----TCGCGATAGAGAATTCCACACAACTG---CTGTTGCATGTGGTTATATGAAC---------ATTCTTGCCG------------------------TTT-ATTCCATA--TTTTCAGCAATTAA---TTAATTATTTA----------
droWil2 scf2_1100000004830:580702-581014 + -----CATTTATTGAATT-----TATAATTTTCACCTTTGC------CAGATATATGTATTTGTCTGCGTGCGTATGTATA------T-----------------ATGTCTGACTGTATTATTCATGAGCACTTTT----TTCAGC-------------TTGCCTTTTTTTGTTGTTTTTGCTAAATCATA-CTAAATTT-GCTCTTTTTTTGGGCCAGACATT------TCAAT--CTT-TTTTGGGCGTAGACACAATACATA-TT-----CACT-------------------------CTGGCTG---CGG-TGCACTCGACTGGGT-CAT---------TTTTTTGTTATGCTTTTAGGCAATCTATGCGCATTTC-ACTTTATA--TTTTCAGCAACTAAA--TTAACTATTCATTTTTGTAAT
droVir3 scaffold_13049:16522291-16522544 - -----CATCCATT-AATT-TTTGTATAATTTTCACCTTGAC------T-----------------T-----------------------------------------------------------------------------GGCTTTGTTATTCT------CTGTATTTC--AGTCTTGCAAAATCATA-CTAC--ATCGC-CT--TTTTTAGCT-GACTCTGGCATCACCACGACAT-ACTTGCGCGTGCACGCAACACATT-TT-----GGGATA----AAACGAAATAAAACTGCATACAACTG---TATCCGCTCGCAGTTGTTTGCATTTCTTTCTTTTTATTGCAA------------------------ATTTATACTATA---TTATTATAGTTAA---TTAATTATTAA----------
droMoj3 scaffold_6680:20207186-20207435 + -----CATCCATT-AATT-TTTGTATAATTTTCACCTTGAC------T-----------------T-----------------------------------------------------------------------------GGCTTTGTTATTCT------CTGTTTTTCAACGTCTTGCAAAATCATA-CTAC--ATCGC-CT--TTTTTAGCT-GACTCTGGCATCACCACGACAT-ATTTGCGCGTGCACGCAACACATT-TT-----GGGATG----AAATGAAATAAAACTGTACACAACTG---TATCCGCTCGTAGTTGTAGGCATT------ATTTTTGTGCAA------------------------ATTTATACTATA--TT-TTTACAGTTAA---TTAATTATTAA----------
droGri2 scaffold_15110:12187671-12187930 + -----CATCCATT-AATTTTTTGTATAATTTTCACCTTGAC------T-----------------T-----------------------------------------------------------------------------GGCTTTGTTATTCTCTCTCTCTGTTTTTCAAAGTCTTGCAAAATCATA----C--ATCGC-CT--TTTTTAGCT-GACTCTGGCATCACCACGACAT-ATTTGCGCGTGCACGCAACACATT-TT-----GGGACG----AAACGAAATAAAACTGCACACAACTG---TATCCGCTCGCAGTTATTTGCATTTTA---ATATTTTTGCAA------------------------ATATATACTATGTACTTTTTATAGTTAA---TTAATAATTAA----------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
-----TATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGCGCGCGTGTGTGTG-A-GT-----------------GCGTATGTGTGTACTTTTTATTAGCACTTTTGGGCTTTAGC----------------------GTTGTTGTTTTTGCTAAACCATTACTT----------T--TTTTTAGACACACATT----------------TCATGGCGCTTCCGC------------T-----CACAAACGCCTGATTACTGAGTACTGCGCACGGCTG---CTGTTGCACTTGGTCGGATGCAT---------GTTTTCGCCA------------------------GCT-AATCCATT--TTTTCAGCAATTAA---TTAATTATTTA----------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................CTGTTGCACTTGGTCGGATGC.................................................................................................2115.00500000022100000000
.................................................................................................................................................................................................................................................................................................................................TTGGTCGGATGCAT---------GTTTTC................................................................................2014.00400000000000004000
.................................................................................................................................................................................................................................................................................................................GCTG---CTGTTGCACTTGGTCGG.....................................................................................................2114.00400000000200002000
..................................................................................................................................................................................................................................................................................................................CTG---CTGTTGCACTTGGTCGGA....................................................................................................2113.00300000000000003000
................................................................................................................................................................................................................................................................................................ACTGAGTACTGCGCACGGCTG---......................................................................................................................2112.00200000000000002000
.....................................................................................................................................................................................................................................................................................................GTACTGCGCACGGCTG---CTGTT.................................................................................................................2112.00200000000000002000
...................................................................................................................................................................................................................................................................................................................TG---CTGTTGCACTTGGTCGGAT...................................................................................................2112.00200000000000002000
............................................................................................................................................................................................................................................................................................................................TGCACTTGGTCGGATGCAT---------GTT...................................................................................2212.00200000000000002000
........................................................................................................................................................................................................................................................................................................................CTGTTGCACTTGGTCGGATTT.................................................................................................2112.00200000000000002000
.................................................................................................................................................................................................................................................................................................CTGAGTACTGCGCACGGCTG---C.....................................................................................................................2111.00110000000000000000
..................................................................................................................................................................................................................................................................................................................CTG---CTGTTGCACTTGGTCGGAT...................................................................................................2211.00100000000000001000
........................................................................................................................................................................................................................CACACATT----------------TCATGGCGCTTCC.................................................................................................................................................................................2111.00100001000000000000
...................................................................................................................................................................................................................................................................................................................TG---CTGTTGCACTTGGTCGGATT..................................................................................................2211.00100000000000001000
......................................................................................GT-----------------GCGTATGTGTGTAC.......................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
..................................................................................................................................................................................................................................................................................................................CTG---CTGTTGCACTTGGTCGGATA..................................................................................................2311.00100000000000001000
...........................................................................................................................................................................................................................................................................................................................TTGCACTTGGTCGGATGCAT---------A.....................................................................................2111.00100000000000001000
.....................................................................................................................................................................................................................................................................................AACGCCTGATTACTGAGTACT....................................................................................................................................2111.00100000010000000000
..............................................................................................................................................................................................................................................................................................TTACTGAGTACTGCGCACGGC...........................................................................................................................2111.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................TGTTGCACTTGGTCGGATGC.................................................................................................2011.00110000000000000000
....................................................................................................................................................................................................................................................................................................................G---CTGTTGCACTTGGTCGGATG..................................................................................................2111.00100000000000001000
...............................................................................................................................................................................................................................................................................................TACTGAGTACTGCGCACGG............................................................................................................................1911.00100000000000001000
....................................................................................................................................................................................................................................................................................................AGTACTGCGCACGGCTG---CTGTT.................................................................................................................2211.00100000000000001000
.........................................................................................................................................GGCTTTAGC----------------------GTTGTTGTTTTTAA........................................................................................................................................................................................................................................................2311.00100000000100000000
...................................................................................................................................................................................................................................................................................................................TG---CTGTTGCACTTGGTCGGAAA..................................................................................................2211.00100000000000001000
........................................................................................................................................................................................................................................................................................................................CTGTTGCACTTGGTCGGATGTT................................................................................................2211.00100000000000001000
....................................................................................................................................................................................................................................................................................................................G---CTGTTGCACTTGGTCGGATGG.................................................................................................2211.00100000000000001000
.....................................................................................................................................................................................................................................................................................................................................TCGGATGCAT---------GTTTTCGCCA------------------------GA..................................................2211.00100000000000001000
...............................................................................................................................................................................................................................................................................................................................ACTTGGTCGGATGCAT---------GTTTT.................................................................................2111.00100000000000001000
...................................................................................................................................................................................................................................................................................................................TG---CTGTTGCACTTGGTCGG.....................................................................................................1911.00100000000000001000
...........................................................................................................................................................................................................................................................................................................................TTGCACTTGGTCGGATGCAT---------G.....................................................................................2111.00100000000000001000
..............................TTCACCTTTGC------T-----------------CGCGCGCGC....................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
...............................TCACCTTTGC------T-----------------CGCGCGC......................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
droSec2
-----TATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGCGCGCGTGTGTGTG-A-GT-----------------GCGTATGTGTGTACTTTTTATTAGCACTTTTGGGCTTTAGC----------------------GTTGTTGTTTTTGCTAAACCATTACTT----------T--TTTTTAGACACACATT----------------TCATGGCGCTTCCGC------------T-----CACAAACGCCTGATTACTGAGTACTGCGCACGGCTG---CTGTTGCACTTGGTCGGATGCAT---------ATTTTCGCCA------------------------GCT-AATCCATT--TTTTCAGCAATTAA---TTAATTA--------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................GCACTTTTGGGCTTTAGC----------------------GTTG..................................................................................................................................................................................................................................................................2211.0011000
.....................................................................CGCGCGTGTGTGTG-A-GT-----------------GCG..................................................................................................................................................................................................................................................................................................................................2011.0010001
..............................................................................................................TGTGTGTACTTTTTATTAGCA...........................................................................................................................................................................................................................................................................................................2111.0011000
............................................................................................................................................................................................................................................................................................GATTACTGAGTACTGCGCACG.............................................................................................................................2111.0010100
.............................................................................TGTGTG-A-GT-----------------GCGTATGTGTGT.........................................................................................................................................................................................................................................................................................................................2120.5010001
dm3
-----TATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGCGCGCGTTTGTGTG-A-GT-----------------GCGTATGTGTGTACTTTTTATTAGCACTTTTGGGCTTTAGC----------------------GTTGTTGTTTTTGCTAAACCATTACTT----------T--TTTTTAGACACACAAT----------------TCATGGCGCTTACGC------------T-----CACAAACGCCCGATTACTGAGTACTGCGCACGGTTG---CTGTTGCACTTGGTCGGATGCAT---------GTT-TCGCCA------------------------GCT-AATCCATT--TTTTCAGCAATTAA---TTAATTATTTA----------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................TTTTGGGCTTTAGC----------------------GTTGTTG...............................................................................................................................................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000010001000000000000000000000100200010
................................................................................................................................................................................................................................................................................................ACTGAGTACTGCGCACGGTTG---......................................................................................................................2117.0070000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000100000000
......................................................................GCGCGTTTGTGTG-A-GT-----------------GCG..................................................................................................................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000
...............................................................................TGTG-A-GT-----------------GCGTATGTGTGTAC.......................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010100000
..............................................................................................................................................TAGC----------------------GTTGTTGTTTTTGCTAA.....................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TTGGGCTTTAGC----------------------GTTGTTGTT.............................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................TGTTGCACTTGGTCGGATGCAA---------......................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................TTG---CTGTTGCACTTGGTCGGA....................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000010000000000000000000
.............................................................................................................................................................................................................................................................................................ATTACTGAGTACTGCGCACGG............................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................TGTGTG-A-GT-----------------GCGTATGTGTGT.........................................................................................................................................................................................................................................................................................................................2122.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013000000000000000000000000000100000
...........................................................................TTTGTGTG-A-GT-----------------GCGTATGTG............................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TTGCACTTGGTCGGATGCAT---------G.....................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000
..................................................................................G-A-GT-----------------GCGTATGTGTGTACT......................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
.................................................................CGCGCGCGCGTTTGTGTG-A-GT-----------------G....................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................ACTTGGTCGGATGCAT---------GTT-T.................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
............................................................................TTGTGTG-A-GT-----------------GCGTATGTGTG..........................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TAGACACACAAT----------------TCATGGCGC.....................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................GTG-A-GT-----------------GCGTATGTGTGTACT......................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................ATTTTCACCTTTGC------T-----------------CGCGCG.......................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................GTTG---CTGTTGCACTTGGTCGG.....................................................................................................2112.0020000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................CGCGCGCGTTTGTGTG-A-GT-----------------GC...................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
........................ATAATTTTCACCTTTGC------T-----------------CGC..........................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................CCGATTACTGAGTACTGCGCA...............................................................................................................................2112.0020000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................TACTGAGTACTGCGCACGGTT..........................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................AGC----------------------GTTGTTGTTTTTGCTAAA....................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................GTTTGTGTG-A-GT-----------------GCGTATGTG............................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................CTTGGTCGGATGCAT---------GTT-TTC...............................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.........................................................................................................................................................................................................................................................................................CCCGATTACTGAGTACTGCGC................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................C------T-----------------CGCGCGCGCGTTTGTGTG-A-........................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CTGTTGCACTTGGTCGGATGC.................................................................................................2112.0020000000000000000000000000010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................G---CTGTTGCACTTGGTCGGAT...................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
..............................................................................GTGTG-A-GT-----------------GCGTATGTGTGTA........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................AGCACTTTTGGGCTTTAGC----------------------GT....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GTACTGCGCACGGTTG---CTGTT.................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................CACCTTTGC------T-----------------CGCGCGCGCGTT.................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TCACCTTTGC------T-----------------CGCGCGCGCG...................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................TTTTGGGCTTTAGC----------------------GTTGTTGC..............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................GCTTTAGC----------------------GTTGTTGTTTTTG.........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................TTG---CTGTTGCACTTGGTCGGC....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................CGATTACTGAGTACTGCGCAC..............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................CGCCCGATTACTGAGTACTGCG.................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................CGGTTG---CTGTTGCACTTGGTC.......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TGAGTACTGCGCACGGTTG---CT....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................TTTGGGCTTTAGC----------------------GTTGTTGT..............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................................................................................TTGTTGTTTTTGCTAAACCAT................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................GCCA------------------------GCT-AATCCATT--TTTTCA................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TTTTAGACACACAAT----------------TCATGGCGCTTAC.................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................ATGGCGCTTACGC------------T-----CACAAAC......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................CGTTTGTGTG-A-GT-----------------GCGTATGT.............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................GGTTG---CTGTTGCACTTGGTCG......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................CACCTTTGC------T-----------------CGCGCGCGCGT..................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TGGGCTTTAGC----------------------GTTGTTGTTTTTGCT.......................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................TTTGTGTG-A-GT-----------------GCGTATGTGT...........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................GTTTGTGTG-A-GT-----------------GCGTATGTGTGTACT......................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................TTTTCACCTTTGC------T-----------------CGCGCGC......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TTGC------T-----------------CGCGCGCGCGTTTGTG.............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................CGCGTTTGTGTG-A-GT-----------------GCGTA................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................CTT----------T--TTTTTAGACACACAAT----------------T.............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................GTTTGTGTG-A-GT-----------------GCGTATGTGT...........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GTTGCACTTGGTCGGATGCAT---------G.....................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................T--TTTTTAGACACACAAT----------------TCAT..........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TTGGGCTTTAGC----------------------GTTGTTG...............................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................CTTTAGC----------------------GTTGTTGTTTTTGC........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TGTG-A-GT-----------------GCGTATGTGTGTACT......................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTTCACCTTTGC------T-----------------CGCGCGCG.....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CTGTTGCACTTGGTCGGATGCA................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TGCACTTGGTCGGATGCAT---------GT....................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TTTTAGACACACAAT----------------TCATGG........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TTTAGC----------------------GTTGTTGTTTTTGCTA......................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................TG-A-GT-----------------GCGTATGTGTGTACTT.....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................GCGCGCGTTTGTGTG-A-GT-----------------GCG..................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................TTTAGACACACAAT----------------TCATGGC.......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GTTGCACTTGGTCGGATGCAT---------......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................G---CTGTTGCACTTGGTCGGATG..................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................................................................................................................................................................................................................................................................................GCACTTGGTCGGATGCAT---------G.....................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................CGCGCGCGCGTTTGTGTG-A-GT-----------------.....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................GTTGTTGTTTTTGCTAAACCA.................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................CGC------------T-----CACAAACGCCCGATTACTG..........................................................................................................................................2311.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GGGCTTTAGC----------------------GTTGTTGTTTTTGC........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................TGGGCTTTAGC----------------------GTTGTTGTT.............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................CGCGCGCGTTTGTGTG-A-GT-----------------G....................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................CACTTTTGGGCTTTAGC----------------------GTTG..................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ATTACTGAGTACTGCGCACGGT...........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................TATAATTTTCACCTTTGC------T-----------------CG...........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................................................................................................................................ACGCCCGATTACTGAGTACT....................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................................................................TGTG-A-GT-----------------GCGTATGTGTGTA........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................TTTTATTAGCACTTTTGGGCT.................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TG---CTGTTGCACTTGGTCGGATTT.................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TTTGGGCTTTAGC----------------------GTTGTTG...............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................TTTGGGCTTTAGC----------------------GTTGTTGTTTTTG.........................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................GCGTTTGTGTG-A-GT-----------------GCGTA................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................CGCGTTTGTGTG-A-GT-----------------GCGTG................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.............................................................................TGTGTG-A-GT-----------------GCGTATGTGTG..........................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................GCGTTTGTGTG-A-GT-----------------GCGT.................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................TGTGTG-A-GT-----------------GCGTATGTGTGC.........................................................................................................................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TTGGTCGGATGCAT---------C.....................................................................................15140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
-----TATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGAGAGCGTGTGTGTG-TG-T-----GTGTTTGT--GTGCGTATGTGTGTACTTTTTATTAGCACTTTTGGGCTTTAGC----------------------GTTGTTGTTTTTGTCAAACCATTACTT---------TT--TTCTTAGCCACACATT----------------TCCTGGCGCTTACGC------------T-----CACAAACGCCCGATTACTGAGTACTGCGCACGACTG---CTGTTGCACTTAGTCGAATGCAT---------GTTTTCGCCA------------------------GCT-AATCCATT--TTTTCAGCAATTAA---TTAATTATTTA----------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................................................................................................................................CTGAGTACTGCGCACGACTG---......................................................................................................................2011.0011000000
....................................TTTGC------T-----------------CGCGAGAGCGTGTGTG.............................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.................................................................................TG-TG-T-----GTGTTTGT--GTGCGTATG..............................................................................................................................................................................................................................................................................................................................2211.0010000100
droYak3
-----TATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGCGCGCGTGTGTGTG-TG-TTATGTGTGTTGGT--GTGCGTATGTGTGTACTTTTTATTAGCACTTTTGGGCTTTAGC---------------------TTTTGTTGTTTTTGCTAAACCATTACT-----------T--TTTTTAGCCACACATT----------------TCCTGGCGCTCACGC------------T-----CACAAACGCCCGATTACTGAGTACTGCGCACGGCTG---CTGTTGCACTTGGTCGGATGCAT---------GTTTTCGCCA------------------------GCT-AATCCATT--TTTTCAGCAATTAA---TTAATTATTTA----------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................TGTTGGT--GTGCGTATGTGTG..........................................................................................................................................................................................................................................................................................................................2011.00101000000000
droEug1
-----CATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGCGCGTGTATGT-----------------------------GTGTGTGTACTTTTTATTAGCACTTTTGGGCTTTAGC----------------------TTTGTTGTTTTTGCTAAACCATAACT-----------T--TTTTCAGCCACACACT----------------TCCTGGCGCTCACGTTTAACGCGTT-TT-----CACAAGCGCCCGATTACGGAGTAATGCGCACGGCTG---CTGTTGCACTTGGTTGGATGCAT---------GTTTTCGCCA------------------------GCT-ATTCCATT--TTTTCAGCAATTAA---TTAATTATTTA----------SizeHit CountTotal NormTotal
No Reads
droBia1
-----CATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGCCCGCTTGTGTGTG-TG-T-----GTGCGCGC--GAGTGTGTGTGTGTACTTTTTATTAGCACTT-TGGGCTTTAGC----------------------TTTGTTGTTTTTGCTAAACCATAACTT---A------T--TTTTTAGCCACACACA----------------GCCAGTCGCGTACGCTC-ACGTGTC-TT-----CACAAACGCCCGATTACGGAGTACTGCACTCGGCTGCTGCTGTTGCACTTGGTTGGATGCAT---------GTTTTCGCCA------------------------GCT-ATTCCATT--TTTTCAGCAATTAA---TTAACTATTTA----------SizeHit CountTotal NormTotal
No Reads
droTak1
-----CATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGCGCGCCTGTGTGTG-TG-T-----GAATGTGT--GGACGTGTGTGTGTACTTTTTATTAGCACTTTTGGGCTTTAGC----------------------TTTGTTGTTTTTGCTAAACCATAACTT---AT-----T--TTTTTGGCCACACACT----------------TCCATTCGCGTACGCTCAACGTGTT-TT-----CACAATCGCCCGACTACGGAGTACTGCGCACGGCTG---CTGTTGCACTTGGTTGGATGCAT---------GTTTTCGCCA------------------------GCT-ATTCCATT--TTTTCAGCAATTAA---TTAACTATTTA----------SizeHit CountTotal NormTotal
No Reads
droEle1
-----CATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CG----------------------------------------------GTGTACTTTTTATTAGCACTTTTGGGCTTTAGC----------------------GTTGTTGTTTTTGCTAAACCATAACTAC--ATCGC-CT--TTTTTAGCCACACACT-----------------CCAGGCGCGAACGCTCAACGTATT-TT-----CACAAACGCCCGAAAACGGATAACTGCGCACGGCTG---CTGTTGCACTTAATTAGATGCAT---------GTTTCCGCCA------------------------GCT-ATTTCATT--TTTTCAGCAGTTAA---TTAATTATTTA----------SizeHit CountTotal NormTotal
No Reads
droRho1
TCGCGCATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGCGCTTGTGTGTGTG--------------------------GTGTGTGTACTTTTTATTAGCACTTTTGGGCTTTAGC----------------------TTTGTTGTTTTTGCTAAACCATAACT-----TCGC-CT--TTTTTAGCCACACACT----------------TCCATGCGCGAACACTCAACGTGTT-TT-----CACAAACGCCTGATTACGGAGAACTGCGCACGGTTG---TTGCTGCACTTAATTATATGCAT---------GTTTCCGCCA------------------------GCT-ATTTCATT--TTTTCAGCAATTAA---TTAATTATTTA----------SizeHit CountTotal NormTotal
No Reads
droFic1
-----CATTTATT-AATT-----TATAATTTTCACCTTTGC------T-----------------CGCGCGCGTGTGTGTGTGGTG-------GTACTGGTGTG-GTGTGTGTGTGTAT-TTTTATTAGCACTTTTGGGCTTTAGC----------------------TTTGTTGTTTTTGCTAAACCAT----------CGC-CT--TTTTTAGCCACACACT----------------TTCAGCCGAGTACAATTTACGATTT-TT-----CAAAACGGTCAGGTTACGGATAAACGCACACGGCTG---GTGTTGCATTTGGTTAGATGCAT---------GTTTTCGCCA------------------------GCT-ATTTCATT-TTTTTCAGCAATTAA---TTAATTATTTA----------SizeHit CountTotal NormTotal
No Reads
droKik1
-----CATTTATT-AATT-----TATAATTTTCACCTTTGC------T----------ATTCCTGCGCGCGCGTATGTGTGTGGCGGT-----------------ATGGGTGTGTGTATTTTTTATTAGCACTTTTGGGCC----------------------------TTGTTGTTTTTGCTAAATCATAACTGCACATCGC-CTT-TTTTTAGCCACACACT----------------GCC-TGCGGGTTCGCGCAACGTGCT-TT-----CACAAATGCCCGGAAACGGAGAACTGCGCTCGGCCG---TTGTTGCACATAGTTGTATGCAT---------GTTTTCGCCA------------------------GCG-TTTTTAG---TTTTCAGCAAATAA---TTAATTATTAATT--------SizeHit CountTotal NormTotal
No Reads
droAna3
-----CATTTATT-AATT-----TACAATTTTCACATTGGCTTTTGCT-----------------TGCCCGTATGTGTGTGTG----T-----------------GTGTGTGTTGGTA-TTTTTATTAGCACTTTGGGGCT-----------------------------TGTTGTTTTTGCTAAATCATAATTAC--ATCCC-C---TTTTCAGCCACACATT----------------ACC-GTCGCGATGGGCCAACGTGTTTTT-----CACAAGCGCGCGACTTCG--------------TCT-CTGCTGATGGACATA----------TTTTTT----ACTTTCCCCA------------------------GCT-ATTCCATA--TTTTCAGAAAATAAGTTTAAATTATTAA----------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................AAGCGCGCGACTTCG--------------TCT-CTG......................................................................................................................2111.001100000
.................................................................................................................................................................................................TAC--ATCCC-C---TTTTCAGCCACA..................................................................................................................................................................................................................2111.001100000
......................................................................................................................................TGGGGCT-----------------------------TGTTGTTTTTGCTT......................................................................................................................................................................................................................................................2111.001100000
.................................................................................................................................................................................................................................................................AACGTGTTTTT-----CACAAGCGCG...................................................................................................................................................2111.001000010
.......................................................................................................................................................................................................................................................................TTTTT-----CACAAGCGCGCGACT..............................................................................................................................................2011.001100000
..............................................................................GTGTG----T-----------------GTGTGTGTTGGTA-.......................................................................................................................................................................................................................................................................................................................1970.141000001
....................................................................CCGTATGTGTGTGTG----T-----------------GTG..................................................................................................................................................................................................................................................................................................................................1980.131100000
droBip1
-----CATTTATT-AATT-----TACAATTTTCACATTGGCTTTTGCT-----------------TGCCC----GTGTGTTTG-A----------------------GTGTGTTGGTA-TTTTTATTAGCACTTTGGGGCT-----------------------------TGTTGTTTTTGCTAAATCATAATTAC--ATCGC-C---TTTTCAGCCACACATT----------------TCC-GTCGCGATGGCCCAACGTGTTATT-----CACAAGCGCGCGACTTTG--------------GCT-CTGCTGATGGACATA----------TTTTTT----ACTTTCCCCA------------------------GCT-ATTCCATA--TTCTCAGAAAATAAGTTTAAATTATTAA----------SizeHit CountTotal NormTotal
No Reads
dp5
-----CATTTATT-AATT-----TATAATTTTCACCTTCGC------T--------------------------------------GT-----------------ATGTGTGTGTGTATTTTTTATTAGCACTTTCTGGCTGCTGT---------------------TTTTGTTGTTTTTGCTAAATCATAACTACACATCGC-CT--TTTTTAGCCACA--TT----------------TGC-TGCGCATTGACGCAACGTGTT-TTTTTTTGCCAAG----TCGCGATAGAGAATTCCACACAACTG---CTGTTGCATGTGGTTATATGAAC---------ATTCTTGCCG------------------------TTT-ATTCCATA--TTTTCAGCAATTAA---TTAATTATTTA----------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................ACTTTCTGGCTGCTGT---------------------TTT....................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
-----CATTTATT-AATT-----TATAATTTTCACCTTCGC------T--------------------------------------GT-----------------ATGTGTGTGTGTATTTTTTATTAGCACTTTCTGGCTGCTGT---------------------TTTTGTTGTTTTTGCTAAATCATAACTACACATCGC-CT--TTTTTAGCCACA--TT----------------TGC-TGCGCATTGACGCAACGTGTT-TTTTTTTGCCAAG----TCGCGATAGAGAATTCCACACAACTG---CTGTTGCATGTGGTTATATGAAC---------ATTCTTGCCG------------------------TTT-ATTCCATA--TTTTCAGCAATTAA---TTAATTATTTA----------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................TGGTTATATGAAC---------ATTCTTGC..............................................................................2111.001010000
................................................................................................................................................................................................................................................................................................................................................................CG------------------------TTT-ATTCCATA--TTTTCAGC..............................2111.001010000
.................................................................................................................................................................................................................................................GC-TGCGCATTGACGCAACGTG.......................................................................................................................................................................2111.001010000
droWil2
-----CATTTATTGAATT-----TATAATTTTCACCTTTGC------CAGATATATGTATTTGTCTGCGTGCGTATGTATA------T-----------------ATGTCTGACTGTATTATTCATGAGCACTTTT----TTCAGC-------------TTGCCTTTTTTTGTTGTTTTTGCTAAATCATA-CTAAATTT-GCTCTTTTTTTGGGCCAGACATT------TCAAT--CTT-TTTTGGGCGTAGACACAATACATA-TT-----CACT-------------------------CTGGCTG---CGG-TGCACTCGACTGGGT-CAT---------TTTTTTGTTATGCTTTTAGGCAATCTATGCGCATTTC-ACTTTATA--TTTTCAGCAACTAAA--TTAACTATTCATTTTTGTAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
-----CATCCATT-AATT-TTTGTATAATTTTCACCTTGAC------T-----------------T-----------------------------------------------------------------------------GGCTTTGTTATTCT------CTGTATTTC--AGTCTTGCAAAATCATA-CTAC--ATCGC-CT--TTTTTAGCT-GACTCTGGCATCACCACGACAT-ACTTGCGCGTGCACGCAACACATT-TT-----GGGATA----AAACGAAATAAAACTGCATACAACTG---TATCCGCTCGCAGTTGTTTGCATTTCTTTCTTTTTATTGCAA------------------------ATTTATACTATA---TTATTATAGTTAA---TTAATTATTAA----------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................CT--TTTTTAGCT-GACTCTGGCATCA.......................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
........................ATAATTTTCACCTTGAC------T-----------------T-----------------------------------------------------------------------------GG.............................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CGCTCGCAGTTGTTTGCATTT.............................................................................................2111.001000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................GACAT-ACTTGCGCGTGCACGCC............................................................................................................................................................................2211.001000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................TA----AAACGAAATAAAACTGCAT................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GTGCACGCAACACATT-TT-----GGG..........................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
..................................CCTTGAC------T-----------------T-----------------------------------------------------------------------------GGCTTTGTTATT...................................................................................................................................................................................................................................................................................2111.001000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................ATCACCACGACAT-ACTTGCG......................................................................................................................................................................................2011.001000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AACTGCATACAACTG---TATCCG................................................................................................................2111.001000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................................................................................................G---TATCCGCTCGCAGTTGTTTG..................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................CACGCAACACATT-TT-----GGGA.........................................................................................................................................................1911.001000000000000000000000000000000000000001000000000000000000000000
droMoj3
-----CATCCATT-AATT-TTTGTATAATTTTCACCTTGAC------T-----------------T-----------------------------------------------------------------------------GGCTTTGTTATTCT------CTGTTTTTCAACGTCTTGCAAAATCATA-CTAC--ATCGC-CT--TTTTTAGCT-GACTCTGGCATCACCACGACAT-ATTTGCGCGTGCACGCAACACATT-TT-----GGGATG----AAATGAAATAAAACTGTACACAACTG---TATCCGCTCGTAGTTGTAGGCATT------ATTTTTGTGCAA------------------------ATTTATACTATA--TT-TTTACAGTTAA---TTAATTATTAA----------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
-----CATCCATT-AATTTTTTGTATAATTTTCACCTTGAC------T-----------------T-----------------------------------------------------------------------------GGCTTTGTTATTCTCTCTCTCTGTTTTTCAAAGTCTTGCAAAATCATA----C--ATCGC-CT--TTTTTAGCT-GACTCTGGCATCACCACGACAT-ATTTGCGCGTGCACGCAACACATT-TT-----GGGACG----AAACGAAATAAAACTGCACACAACTG---TATCCGCTCGCAGTTATTTGCATTTTA---ATATTTTTGCAA------------------------ATATATACTATGTACTTTTTATAGTTAA---TTAATAATTAA----------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 12:05 PM