ID:

dsi_24411

 Coordinate:

2l:16394227-16394473 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-54.1 -54.0 -54.0

Flybase annnotation

five_prime_UTR [2l_16394474_16394624_+]; exon [2l_16394474_16394624_+]; five_prime_UTR [2l_16394077_16394226_+]; exon [2l_16394077_16394226_+]; intron [2l_16394227_16394473_+]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTCTAAAAACTCGGCGTAACTGTGGCCCCACACTCGATCCGACTTTTCCGGTAAGATCCAATGATTCGCCAATTTCTGCGTCGGCTTTTTCGCGACGCCCGGCTCTACACGCATACATATTCGCCGTTTGGCCAGTGTGTATATATATGTCGCTGTCTGATTAGTGCGCGCCAGTGTGTGTGTGCAGCTCGTGCTGGGTTAGAAATTTTTTTCTACATCGCCCCTTGCATGAGGCATTAGTTAATTCTGAAAGGGAAACCCATTCTAAAGGGCGACAAAAATGTTATTAATTTCCAGAACCCTTTGGAGAAGTCATCAGCGCCTTCAGCTGCAACAGCAACTCGTGC
**************************************************************************************.....((((((..((........)).(((((((((.(((....))).))))))))).....))))))....((((((((((((((((.....)).))))..(((((((.((((((((((....))))))....))))...))))))))))))))))).........((....)).************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 M024
male body		 GSM343915
embryo
 SRR902008
ovaries
......................................................................................TTTTCGCGACGCCCGGCTC.................................................................................................................................................................................................................................................. 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
....................TGTGGCCCCACACTCGATCCGACTGT............................................................................................................................................................................................................................................................................................................. 26 1 1 2.00 2 0 1 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................................................AATTCTGAAAGGGAAACCC...................................................................................... 19 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.......AACTCGGCGTAACTGTGGCCC............................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......AAACTCGGCGTAACTGTGGCCCC.............................................................................................................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................GTCATCAGCGCCTTCAGCTG................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......AACTCGGCGTAACTGTGGCCCCACA........................................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.TCTAAAAACTCGGCGTAACTGTGGC................................................................................................................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...............................................................ATTCGCCAATTTCTGCGTCGGCT..................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.TCTAAAAACTCGGCGTAACTGTGG.................................................................................................................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........CTCGGCGGAACTGTGGCCC............................................................................................................................................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....AAAACTCGGCGTAACTGTGGCCCCA............................................................................................................................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................TCTGCGTCGGCTATTTCGGGA............................................................................................................................................................................................................................................................ 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................GTGCAGCTCGTGCTGGGT.................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...........................CCACACTCGATCCGACTT.............................................................................................................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.TCTAAAAACTCGGCGTAACTGTGGA................................................................................................................................................................................................................................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................TGCGCGCCAGTGTGTGTGTG................................................................................................................................................................... 20 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................ATTCTGAAAGGGAAACCA...................................................................................... 18 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0
..........................................................................TCTGCGTCGGCTATTTCGGG............................................................................................................................................................................................................................................................. 20 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................ATTCTACAGTCCGACAAAAA.................................................................. 20 3 9 0.44 4 0 0 0 0 0 0 3 0 0 1
................................................................................................................................................................................................................................................................................................................TGGAGATTTCATCAGCGACTT...................... 21 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0
............GTCGTGACTGTGGCCCCCCA........................................................................................................................................................................................................................................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 0 0 0 1 0
.......................................................................................................................................TGTGTATCCATAGGTCGCTG................................................................................................................................................................................................ 20 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................................................................TAATTCAGAAAGGGAAA......................................................................................... 17 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0
...............................................CCGGTATGATCCAAT............................................................................................................................................................................................................................................................................................. 15 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................GTGCAGATCGTGCTGG...................................................................................................................................................... 16 1 8 0.13 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................CCAGTCTAAAGGGCGTCGA..................................................................... 19 3 12 0.08 1 0 0 0 1 0 0 0 0 0 0
.........................................................................CTCTGCGTCGGCTATTTCGG.............................................................................................................................................................................................................................................................. 20 3 12 0.08 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................GAGTTAATTTTGAAAGGGGAA......................................................................................... 21 3 13 0.08 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................AAATGTTATTAATTT...................................................... 15 0 15 0.07 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................GCTCGTTCTGGGTTAC................................................................................................................................................. 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................TTTGCGGCTGTCTGATTAG....................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................ATAATTCTAAAGGGCGACA...................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................................................................................................................................................................TTCTTAATTTCCAGA................................................. 15 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

GAGATTTTTGAGCCGCATTGACACCGGGGTGTGAGCTAGGCTGAAAAGGCCATTCTAGGTTACTAAGCGGTTAAAGACGCAGCCGAAAAAGCGCTGCGGGCCGAGATGTGCGTATGTATAAGCGGCAAACCGGTCACACATATATATACAGCGACAGACTAATCACGCGCGGTCACACACACACGTCGAGCACGACCCAATCTTTAAAAAAAGATGTAGCGGGGAACGTACTCCGTAATCAATTAAGACTTTCCCTTTGGGTAAGATTTCCCGCTGTTTTTACAATAATTAAAGGTCTTGGGAAACCTCTTCAGTAGTCGCGGAAGTCGACGTTGTCGTTGAGCACG
**************************************************************************************.....((((((..((........)).(((((((((.(((....))).))))))))).....))))))....((((((((((((((((.....)).))))..(((((((.((((((((((....))))))....))))...))))))))))))))))).........((....)).************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 M023
head
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body
..................................................................................................................................................................................................................................................................GGGTAAGATTTCCCGCTGTTT.................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.................................................................................................TGGCCGAGATGTGCGTATGTAT.................................................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................AGTGAGCTAGGCTGAAAAG........................................................................................................................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................CGAAAAAGCGCTGCGGGC...................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..........................AGGTGTGAGCTTGGCTGAAAA............................................................................................................................................................................................................................................................................................................ 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0
.................................................................................................GGGCCGAGGTGTGCGTATGTA..................................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................CGCGGAAGTCGACGTGG............ 17 1 12 0.50 6 0 0 0 0 6 0 0 0 0
..............................................................................................................................AAACCTGTCACACATATATAT........................................................................................................................................................................................................ 21 1 10 0.20 2 0 0 0 0 0 2 0 0 0
..............................................................................................................................................................................................................AAAAAAGATGTAGTGGGA........................................................................................................................... 18 2 8 0.13 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................AGTAGTCGCGGAAGCCGT................. 18 2 9 0.11 1 0 0 0 0 0 0 0 1 0
..............................................................................................................................................................................................................AAAAAAGATGTATCGGAGAC......................................................................................................................... 20 3 19 0.11 2 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................TCGCGGAAGTCGACGTGG............ 18 1 10 0.10 1 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................TCGCGGAAGTCGACG............... 15 0 10 0.10 1 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................AAAAATAGATGTATCGGAGA.......................................................................................................................... 20 3 10 0.10 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................TCGCGGAAGTCGACGT.............. 16 0 10 0.10 1 0 0 0 0 0 0 1 0 0
..................................................................................................................................................................................................................................................................................................AAAGGTCTTGGGCAA.......................................... 15 1 11 0.09 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAAAAAAGATAATGCGGGGAA......................................................................................................................... 21 3 15 0.07 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TCAAAAAAGATGTAG................................................................................................................................ 15 1 18 0.06 1 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................................................................................................................ACCTCTAAAGTAGTCGC.......................... 17 2 20 0.05 1 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................CGATGTAGGGGGGAAC........................................................................................................................ 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................AATAAGAAGTAGCGGGGTA......................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0
.....................................................................................AAAAAACGCTGCGCTCCGA................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................AAAAAAAATCTAGCGGGG........................................................................................................................... 18 2 20 0.05 1 0 1 0 0 0 0 0 0 0
.........................................................GGTTACTAGGCGGTTTAAC............................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:16394177-16394523 + dsi_24411 CTCTAAAAACTCGGC--GTAA---------------------------CTGTGGCCCCACACTCGATCCGACTTTTCCGGTAA-G-----------------AT--CCA--ATGATTCGCCA-------ATTTCTGCGTCGGCT-TTTTCGCGACGCCCGGCTC-----------------TACACGCATACATATTCGC--------CGT----------TT-GGCCAGTGTGTA------TAT-------------AT--ATGTCGCT----GTCTGATTA-GTGCGCGCCA------GTG----TGTGTGTGCA-------GCTCGTGCTG-GGTTAG-----------AA-A--TT----TTTTTC-TAC------------------ATCG---C-CCC-TTGCATGAGGCATTAGTTAATTCTGAAAGGGAAA------CCCA--TTC----------------------TAAAGGGCGAC----AAAA---ATGTTATTAATTTCCAGAACCCTTTGGAGAAGTCATCAGCGCCTTCAGCTGCAACAG-----CAA----CTCGTGC----
droSec2 scaffold_7:472783-473128 + CTCTTAAAACTCGGC--GTAA---------------------------CTGTGGCCCCACACGCGATCCGATTATTGCGGTAA-G-----------------AT--CCA--ATGATTCGCCA-------ATTTCTGCGTCGGCT-TTTTCGCGACGCCCGGCTC-----------------TACACGCATACATATTCGC--------TGT----------TT-GGCCAGTGTGTA------TAT-------------AT--ATGTCGTT----GTCTGATTA-GTGTGCGCCA------GTG----TGTGTGTGCA-------GCTCGTGCTG-GGTCTG-----------AA-A--TT----TTTTTC-TAC------------------ATCG---C-CCC-TTGCATGAGGCATTAGTTAATTCTTAAAGGGAAA------CCCA--T-C----------------------TAAAGGGCGAC----AAAA---ATGTTATTAATTTCCAGAACCCTTTGGAGAAGTCATCAGCGCCTTCAGCTGCAACAG-----CAA----CTCGTGC----
dm3 chr2L:16827197-16827543 + CTCTACAAACTCGGC--GTAA---------------------------CTGTGGCCCCACACTCGATCCGGCTATTGCGGTAA-G-----------------AT--CCA--ATGATTCGCAA-------ATTTCTGCGTCGGCT-TCTTCGCAACGCCCGGCTC-----------------TGCACGCATACATATTCGC--------TGT----------TT-GGCCAGTGTGTA------TAT-------------AT--GTGTCGCT----GTCTGATTA-GTTTGCGCCA------GTG----TGTGTGTGCA-------GCTCGTGCTG-GGTCTG-----------AA-A--TT----TTTTTC-TAC------------------ATCG---C-TTC-TCGCATGAGGCAATAGTTAATTCTGAAAGGGAAA------CCAA--TTT----------------------TAAAGGGTGAC----AAAA---ATGTTATTAATTTCCAGAACCCTTTGGAGAAGTCATCAGCGCCTTCAGCTGCAACAG-----CAA----CTCGTGC----
droEre2 scaffold_4845:19897668-19898014 + CTGTACAAAGTCGGC--TCAA----------------------------TCTGGCCCCACACTCGATCCAGCTTTTGCGGTAA-G-----------------AT--TTA--ATGATTCGCCA-------ATTTCTTCGTCGGC--TTTTAGCGACGCCCGGCACA----------------TACACGCATACACATTCGC--------TGT----------TT-GGCCAGTGTGTA------TAT-------------GT--GTGCCGCT----GTCTGATTA-GTGTGCGCCA------GTG----TGTGTGTGCA-------GCTCGTGCTG-GGTCTG-----------AAAA--AT----TTTTCC-TAT------------------ATCG---C-CCC-TTGCATGAGGCAATAGTTAAATGCGAGAGGGAAA------CAGA--TTC----------------------TGAAGGGCGAC----AAAA---ATGTTATTAATTTCCAGAACCCTTTGGAGAAGTCATCAGCGCCTCCAGCTGCAACAG-----CAA----CTCGTGC----
droYak3 2R:4273481-4273827 - CTCTACATAATCGGC--GCAA---------------------------CTGTGGCCCCACACTCGATACAGCTTTTGCGGTAA-G-----------------AT--CTA--ATGATTCGCCA-------ATTTCTTCGTCGGC--TTTTCGCGACGCCCGGCACA----------------TACACGCATACACATTCGC--------TGT----------TT-GGCCAGTGTGTA------TAT-------------GT--GTGCCTCT----GTCTGATTA-GTGCGCGCTA------GTG----TGTGTGTGCA-------GCTCGTGCTG-GTTCTG-----------AA-A--AT----TTTTCC-TAT------------------ATCG---C-CCC-TTGCATGAGGCAATAGTTAAATGTGAGAGGGAAA------CACA--TTT----------------------TGAAGGGCGAC----AAAA---ATGTTATTAATTTCCAGAACCCTTTGGAGAAGTCATCAGCGCCTCCAGCTGCAACAG-----CAA----CTCGCGC----
droEug1 scf7180000408961:399842-400184 + CTTCTCATATACGGC--AAAA---------------------------GTGTGGCCACGGAATCGATCTGGTTATTACGGTAT-G-----------------GCTTCGA--ATGATTCGCAACT-----TTTTTTTCGTCGGCG-TTTTCGCGACGCCCGGCG------------------------TATACACATTCGC--------ATT----------TT-GAACAGTGTGTA------TGTGTGT---------AT--GTACCGCT----GCCTGATTA-GTCTGTGTC--------TG----TGTGCGGGTA-------GCTCGTGCCTGCGTCTGAA------AA-AA-A--AT----TTTT---AAT------------------ATCG---G-CCG-TCGCATGAGGCAAAAGATAGATGTGAA-GGTAAA-----AA-C---T--------------------TC--TA--------AAAGAAAAA---ATGTTACTAATTTCCAGAACCATTTGGAGAAGTCATCACCGCCTCCTTCTACAACAA-----CAA----CTGGTGT----
droBia1 scf7180000301468:1000615-1000962 + CTGTACGAACACGGC--GTAA---------------------------TTGTGGCCCCACAGTCGATCCGGTTTTTACGGTAC-A-----------------GCCCTTA--ATTACAAGCCA-------AGTTTTTCGTCGGC--TTTTCGCGACGCCCGGCACA----------------TACGCGCATACACACACGC--------ACT----------TTTGGACAGTGTGTA------TGTGT-----------GT--GTGCCGCT----GTCTGATTA-GCGTGCGCC--------TG----TGTGTGTGCA-------GCTCGTGCTGGGGTCTG-----------AA-A--AT----TTTTCC-TAC-------AT-------ATATCAGCGC-CCA-TTGCATGAGGCAATAGTTGG-----------AAA------A-CA--TTT-----AAA---------------AAAAAT----CAAACAAA---ATGTTACTAATTTCCAGGACTATCTGGCGAAGTCATCAGCGCCTGCAGCTGCAACAA-----CAA----CTCGTGC----
droTak1 scf7180000415914:584173-584534 + CTGTACGAACACGGC--GTAA---------------------------TTGTGGCCCCACAGTCGATCCAGTTATTAAGGTAC-A-----------------GCTCTTG--ATTATTCGCCT-------AATTTTAGGTCGGCT-TTTTCGCGACGCCCGGCACA----------------TACGCGCATACACATTCGC--------ATT----------TTGGGCCAGTGTGTA------TATGT-----------GT--GTGCCGCT----GTCTGATTA-GTGTGCGCC--------TG----TGTGTGTTCA-------GCTCGTGCTGGGGTCTG-----------AA-AAAAT----TTTTCC---TTTCCTACAT-------ATATCG---C-CCG-CTGAATGAGGCAATAGTTG---------GGG--A------GCA-ATTACTAACAGAAAAAAACC-------------GCA----AAAAAA---ATGTTACTAATTTCCAGGACCCTCTGGCGAAGTCATCAGCGCCTCCAACTGCAGCAG-----CAA----CTCGTGC----
droEle1 scf7180000490579:513316-513664 - GTGTACGAAACCGGC--GTAA---------------------------TTGTGGCCCCACAATCGGTCAAGTTAATACGGTAA-A-----------------GCCTCCT--ATAATTCGCCA-------ACTTTTTCGTCGGCA-TTTTCGCGACGCCCGGCACG----------------TACACGCATACACACTCGC--------T-C----------TT-GGACAGTGTGTG------TATAT-----------GT--GTGCCGCC----GTCTGATTA-GTGTGCGCCT------GTG----TGTGTGTGTA-------GCTCGTGCTGGGGTCTG-----------AA-A--AT----TTTTTCTTAT------------------ATCG---C-CCCGTTGCATGAGGCAATAGTTAAATTAGA--GGG--C--CAAATTA-----------------------AGC----------TACAAAAAAAT---ATGTTGTTAATTTCTAGGACCCTTTGGCGAAGCCATCAGCGCCTGCAACTGCAACAA-----CAA----CTCGTGC----
droRho1 scf7180000780103:143858-144206 - CTGCGGGAATACAGC--GCAA---------------------------TTGTGGCCCCACAATCGATCCAGTTAATACGGTAACA-----------------GCCTCCA--ATAATTCGCCA-------ACTTTTTGGTCGGCA-TTTTCGCGACGCCCGGCACA----------------TACACGCATACACATTCGC--------CTC---TC-----TT-GGAGAGTGTGTG------TACAT-----------GT--GTGCCGCC----GTCTGATTA-GTTTGCGCC--------TG----TGTGTGTGTA-------GCTCGTGCTGGGGTCTG-----------AA-A--AT----TTTTCC-TAT------------------ATCG---C-CCG-CTGCATGAGGCAATAGTTAAATAAAA--GGG--T--CAAAATA-----------------------AAC--T--------ACATCAAAAA---ATGTTGTTAATTTCCAGAACCCTTTGGCGAAGCCATCAGCGTCTGCAACTGCAACAA-----CAA----CTCGTGC----
droFic1 scf7180000454078:760309-760647 + CTGTCGAACTCCAGC--GTAA---------------------------TTGTGGCCCCGCACTCGAAAAACTTAATACGGTAG-G-----------------GCTGCTT--ATAATTCGGAC-------ACTTTTTCGTCGGCA-TTTTCGCGACGCCCGGCACA----------------TACACGCATACAAATTCGC--------TTC----------TT-GGACAGTGTGTA------TAT-------------GT--GTAGCGGT----GTCTGATTA-GTTTCC-CCT------GAG----TGTGTGTGTA-------GCTCGTGCTGGGGTCTA-----------AA-A--AT----TTTT-------------------------TCG---C-TCG-CTGGATGAGGCAATACTTAAATGTGAGGGGGAA--------TA-ATT--------------------GC----------TACAAAAAACA---ATGTTACTAATTTCCAGGACCCTTTGGCGAAGCCATCAGCGCCTGCAACTGCAACAA-----CAA----ATCGTGA----
droKik1 scf7180000302472:104027-104343 + CTGTCCAACTACGGC--ATAA---------------------------TTGTGGCCCCACAATCGATCCAATTGCTGCGGTAC-G-----------------TTCTTGG--GTAATTGGCAG-------TCTTTTTCGTCGGCG-TTTTCGCGACGCCCGGCACA----------------TACACGCACACACTTG-----------------------------AAATTGTGTA------TGT-----------------GTGCA-GT----GTCTGATTGTGAGTGCGCCA------GTGTATGTGTGTGTGTA-------GCTCGTGCGG-GGTCCA-----------------ATTT--TTTTCA-TAT------------------ATCG---CACCG-CCGCATGAGGCTAG-----------------AAA------ATC------------------------GC------------CTTAAAAAT---ATGTTGTTAATTTCCAGGGCTCTTTGGCGAAGTCACCAGCGACTGCAACTGCATCAG-----CAA----CTTGTGC----
droAna3 scaffold_12916:7395740-7396074 + AT--------ACGGT--GT-A---------------------------TTGTGGCCCCACAGTTGACCCAACTGATCCGGTAC-G-----------------CTTATCT--ATTATTCGCAG----------TTTTCGTCGGCA-TATTTGCGACGCCCGGCACATCAAC------------TCACCCCTACACATGAA--------------------------GATTTTGTGTA------TGT-----------------GT-CCGCT----GTCTGATTGTGCGTGCGCAT------GTG--TGTGTGTGTGTG-------ACTCGTGCTGGGGTCCGAACAGAAAAA-AA-A--AT----TTTT---TATTTCTT--------------------C-CTT-CTGCATGAGGCAATTGTTAAATGCCCGTAG-AA-------TTC------------------------GT------------TTTTAAAAA---ATGTTACTAATTTCCAGAACTCTTTGGCGAAGTCACCAGCGGGTGCTTCTGCAGCAA-----CAA----CTAGTGC----
droBip1 scf7180000396554:13459-13781 + AT--------ACGGT--GT-A---------------------------TTGTGGCCCCACAGTTGACCCAACTGATCCGGTAC-G-----------------CTTATCT--ATTATTCGCAG----------TTTTCGTCGGCA-TATTTGCGACGCCCGGCACATCAAC------------TCACCCCTACACATGA--------------------------AGCTATTGTGTA------TGT-----------------GT-CCGCT----GTCTGATTGTGCGTGCGCA--------TG----TGTGTGTGTG-------ACTCGTGCTG-GGTCCGAA------AAAAA-A--AT----TTTT----ATTTCTT--------------------C-CAT-CTGCATGAGGCAATGGTTAAATGCCCCAAG-AA-------TTC------------------------GT-------------TCTAAAAA---ATGTTACTAATTTCCAGAACACTTTGGCGAAGTCACCAGCGGGTGCTTCTGCAGCAA-----CAA----CTAGTGC----
dp5 4_group3:2946885-2947212 - TTAACAAA----AGA--GCAA---------------------------TTCTGGCCTTGCAAGCGCTTCACCTACTACGGTAC-G-----------------TT--CTCATCGAGTTTGGCA-------TGTTTTTCGTCGGCA-TTTTCGCGACGCCCGGCACA----------------CAGTCGC-------------------------------------GATATTGTGTA------TGTGTGCAGTTGAG-TCCAATTGCCACT----GTATGCGTT-GTGTGTATG--------TG----TGTGTGTGTG-------TCTCGCGCTG-GGTCTG-----------AA-A--AT----TTTT---TAC------------------ATCA---G-CGC-TTGCATGCGGCCATAATTAAATAAAAA-----------------------------------ACGC-GATTTGT--------TTAACAAA---ATGTTATTAATTTCCAGGACGATTTGGCGTAGTCACCAGAGACTGCAACTACAAGCA-----GCA----CTCGTGC----
droPer2 scaffold_1:4433538-4433865 - TTAACAAA----AGA--GCAA---------------------------TTCTGGCCTTGCAAGCGCTTCACCTACTACGGTAC-G-----------------TT--CTCATCGAGTTTGGCA-------TGTTTTTCGTCGGCA-TTTTCGCGACGCCCGGCACA----------------CAGTCGC-------------------------------------GATATTGTGTA------TGTGTGCAGTTGAG-TCCAATTGCCACT----GTATGCGTT-GTGTGTGTG--------TG----TGTGTGTGTG-------TCTCGCGCTG-GGTCTG-----------AA-A--AT----TTTT---TAC------------------ATCA---G-CGC-TTGCATGCGGCCATAATTAAATAAAAA-----------------------------------ACGC-GATTTGT--------TTAACAAA---ATGTTATTAATTTCCAGGACGATTTGGCGTAGTCACCAGAGACTGCAACTACAAGCA-----GCA----CTCGTGC----
droWil2 scf2_1100000004577:1206783-1207182 + TTTTAAAAAGTTCGT----AGTTTTGCATTCGAAAATCAAAAAGAGAATACTGGCACTTCAATCGCTTGCCTTGCTAAGGTAA-ATGAGTAATAAG------A----------ATTACGCTC-------ATTTTCACATCGGCATTTTTCGCGACGCCCGGCAATTGCAGACTAACATACATACACACACACACACACACAGGGAAAAGTT---TTATGTATA-TAATTTTGTGCC------TGTGTGT---------GT--GTGC--------------------------CAGTGCGTTTG----TGTGTGT--TGTATGGGGCTCGTGGTG-CGCCAG-----------AA-A--ATCTATTTTT---TTT----TTCAACTGAATC--ATGA---A-ATA-TTGCA-----------------------GAG-----CA----A-ATT--------------------GC--TA-AAA----TAAAAAATA---ATGTTATTGATTTCTAGAAACATTTGGCGTAGTCAGCAGCAATTGCAGCTACAACAATTGGTCAAAGGATT-TGGC----
droVir3 scaffold_12963:13944421-13944744 + TACTAAAAATTAAGA--ATA----------------------------TAAT---------AACCGTTACGTTGTTAAGGTAA-G-----------------CGCGAAT--AGCAATTGCAAATTGGTCAATAGCTCGTCGGCG-TTTTCGCGACGCCCGGCACA----------------GACACAAACATGCA---------------------------------------TATATGTATGT----ACATGACATAC--GTA--CACGCACACATAGGTT-ATCTTCAAA--------TG----TGTGTGTGGT-------TCTCGTGCTTTGAAAAG-----------AA-A--AT----TT------AT------------------ATCG---G---C-TTGCAA-AGGCGCAA----TCCGCGTGAGTGAAAATCAAAGCT------------------------GCT----------TTAAATTAAA---ATGCTATTCGTTTACAGAAACGTTTGGCGTTGTCAGCAGCCCCGACTACTCCAAC---------------T-CTGC----
droMoj3 scaffold_6500:5694552-5694906 - ACGTAATAACTC-CC--GCAA---------------------------TTGTGTTAAAGATAGACATCATATTGCTTAGGTAA-G-----------------CGCGAAT--ACCAATTGCAAATTGGTCAATAGCTCATCGGCG-TTTTCGCGACGCCCGGCACA----------------GACACACACACACATGCAC--------AGTCAACA-----TA-AGCAAGTACACG------TAT-------------AT--ACGCACACGCACGCATAGGTT-TTTGGTAAA--------TG----TGTGAGTGCT-------GCTCGTGCTTAGAAAAG-----------AA-C--AT----TTTT----TT------------------ATCG-------G-TTGCAAAAGGCGCAA----ACTGTGCGAGGGAAAAGCGC-AAC------------------------GCT----------TTAAATTAAA---ATGCTTATAATTTCCAGAAACGTTTGGCGTTGTCAGCAGCAGCGACTGCTACAATTG---GGGAA----ATCATCA----
droGri2 scaffold_15126:5947738-5948096 - ATTTTAAT--TC-GCACAAAA---------------------------TTGAGCTACATAAATCCATCATATTGCTAAGGTGA-GCG--CAATAGTACCACAA---TAG--CAAATTGGT-C-------AATAGCTCGTCGGCG-TTTTCGCGACGCCCGGCACTCA--------------CACATGCACACGCATTCAA--------ATG----------TT-TGTATGTACACG------TAT-------------AT--GTA--CACGCACACATAAAAA-CAGCGTTTCA------ATG----TGTATGT--GG-TTGGTGCTCGTGCTTTGAAAAG-----------AA-A--AT----TATT-----T------------------ATCG---G---C-TTGCAAGAGACGCAC----ACCGTGTGAGTGAAGAGCGA-----------------------AAGC-GCTTTAT--------AAAACAAAATGTTGTTAATAATTTGCAGAAACCTTTGGCGTTGCCAGCAGCAG---------CAGCAT-----CAA----CTACTGCTTCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CTCTAAAAACTCGGC--GTAA---------------------------CTGTGGCCCCACACTCGATCCGACTTTTCCGGTAA-G-----------------AT--CCA--ATGATTCGCCA-------ATTTCTGCGTCGGCT-TTTTCGCGACGCCCGGCTC-----------------TACACGCATACATATTCGC--------CGT----------TT-GGCCAGTGTGTA------TAT-------------AT--ATGTCGCT----GTCTGATTA-GTGCGCGCCA------GTG----TGTGTGTGCA-------GCTCGTGCTG-GGTTAG-----------AA-A--TT----TTTTTC-TAC------------------ATCG---C-CCC-TTGCATGAGGCATTAGTTAATTCTGAAAGGGAAA------CCCA--TTC----------------------TAAAGGGCGAC----AAAA---ATGTTATTAATTTCCAGAACCCTTTGGAGAAGTCATCAGCGCCTTCAGCTGCAACAG-----CAA----CTCGTGC----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................TTTTCGCGACGCCCGGCTC-----------------.............................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTGAAAGGGAAA------CCC..................................................................................................................................1912.00200200000000000000
.......AACTCGGC--GTAA---------------------------CTGTGGCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
......AAACTCGGC--GTAA---------------------------CTGTGGCCCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATCAGCGCCTTCAGCTG.............................2011.00100100000000000000
.......AACTCGGC--GTAA---------------------------CTGTGGCCCCACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
.TCTAAAAACTCGGC--GTAA---------------------------CTGTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
..................................................................................................................ATTCGCCA-------ATTTCTGCGTCGGCT-.................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
.TCTAAAAACTCGGC--GTAA---------------------------CTGTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
.....AAAACTCGGC--GTAA---------------------------CTGTGGCCCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000000000000000
........................................................................................................................................................................................................................................................................................................................GTGCA-------GCTCGTGCTG-GGT................................................................................................................................................................................................................................................1811.00100000000001000000
........................................................CCACACTCGATCCGACTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
.TCTAAAAACTCGGC--GTAA---------------------------CTGTGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
.............................................................................................................................................................................................................................................................................................TGCGCGCCA------GTG----TGTGTGTG.......................................................................................................................................................................................................................................................................2020.50100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGAAAGGGAAA------CCA..................................................................................................................................1820.50100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---ATGTTATTAATTT...................................................................15150.07100000010000000000
droSec2
CTCTTAAAACTCGGC--GTAA---------------------------CTGTGGCCCCACACGCGATCCGATTATTGCGGTAA-G-----------------AT--CCA--ATGATTCGCCA-------ATTTCTGCGTCGGCT-TTTTCGCGACGCCCGGCTC-----------------TACACGCATACATATTCGC--------TGT----------TT-GGCCAGTGTGTA------TAT-------------AT--ATGTCGTT----GTCTGATTA-GTGTGCGCCA------GTG----TGTGTGTGCA-------GCTCGTGCTG-GGTCTG-----------AA-A--TT----TTTTTC-TAC------------------ATCG---C-CCC-TTGCATGAGGCATTAGTTAATTCTTAAAGGGAAA------CCCA--T-C----------------------TAAAGGGCGAC----AAAA---ATGTTATTAATTTCCAGAACCCTTTGGAGAAGTCATCAGCGCCTTCAGCTGCAACAG-----CAA----CTCGTGC----SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................CGTGCTG-GGTCTG-----------AA-A--TT----TTTTT.................................................................................................................................................................................................................2311.0011000
....................................................................................................................................................................................................................................................................................................................GTGTGTGCA-------GCTCGTGCTG-GGTCTG-----------A.................................................................................................................................................................................................................................2611.0010010
.....................................................................................................................................................................................................................................................................................................A------GTG----TGTGTGTGCA-------GCTCGTGCTG-GGT................................................................................................................................................................................................................................................2711.0010001
................................................CTGTGGCCCCACACGCGATCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
.................................................................................................................................................................................................................................................................................................................................................................................................................CCC-TTGCATGAGGCATTAGTT...........................................................................................................................................................2111.0010010
...............................................................................................................................................................................................................................................................................................TGCGCCA------GTG----TGTGTGTG.......................................................................................................................................................................................................................................................................1870.1410010
dm3
CTCTACAAACTCGGC--GTAA---------------------------CTGTGGCCCCACACTCGATCCGGCTATTGCGGTAA-G-----------------AT--CCA--ATGATTCGCAA-------ATTTCTGCGTCGGCT-TCTTCGCAACGCCCGGCTC-----------------TGCACGCATACATATTCGC--------TGT----------TT-GGCCAGTGTGTA------TAT-------------AT--GTGTCGCT----GTCTGATTA-GTTTGCGCCA------GTG----TGTGTGTGCA-------GCTCGTGCTG-GGTCTG-----------AA-A--TT----TTTTTC-TAC------------------ATCG---C-TTC-TCGCATGAGGCAATAGTTAATTCTGAAAGGGAAA------CCAA--TTT----------------------TAAAGGGTGAC----AAAA---ATGTTATTAATTTCCAGAACCCTTTGGAGAAGTCATCAGCGCCTTCAGCTGCAACAG-----CAA----CTCGTGC----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................GCCA------GTG----TGTGTGTGCA-------GCTCGTG.......................................................................................................................................................................................................................................................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
......AAACTCGGC--GTAA---------------------------CTGTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000200000000000000000000000000000000000
..................TAA---------------------------CTGTGGCCCCACACTCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................A-GTTTGCGCCA------GTG----TGTGTG.........................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000001000000000000000000
.....................................................................................................................................................................................................................................................................................................A------GTG----TGTGTGTGCA-------GCTCG.........................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000101000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCCTTTGGAGAAGTCATC...........................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000
..................................................................................................................................................................................................................................................................................................GCCA------GTG----TGTGTGTGCA-------GCT...........................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010
..........................................................................................................................................................................................................................................................................................................................GCA-------GCTCGTGCTG-GGTCTG-----------..................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCGCCTTCAGCTGCAACAG-----CAA----C..........2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........CTCGGC--GTAA---------------------------CTGTGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................GATTA-GTTTGCGCCA------GTG----TG.............................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000
..................................................................................................................................................................................................................................................................................................GCCA------GTG----TGTGTGTGCA-------GCTCG.........................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000
....................................................................................................................................................................................................................................................................................................CA------GTG----TGTGTGTGCA-------GCTCGTGCTG-GG.................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTGAAAGGGAAA------CCAA--TTT----------------------T.....................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TGTGCA-------GCTCGTGCTG-GGTCTG-----------..................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................CGTGCTG-GGTCTG-----------AA-A--TT----......................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................T----TTTTTC-TAC------------------ATCG---C-TTC-TC...........................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200
...................................................................................................................................................................................................................................................................T--GTGTCGCT----GTCTGATTA-......................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................TTGCGGTAA-G-----------------AT--CCA--ATGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
......................................................................................................................................................................................................................................................................................................................GTGTGCA-------GCTCGTGCTG-GGTCTG-----------..................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GCCCCACACTCGATCCGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...........................................................CACTCGATCCGGCTATTGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTCTGAAAGGGAAA------CCAA--T..............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGAACCCTTTGGAGAAGTCATCAG.........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AACTCGGC--GTAA---------------------------CTGTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.......AACTCGGC--GTAA---------------------------CTGTGGCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CG---C-TTC-TCGCATGAGGCAATAG.............................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCGCCTTCAGCTGCAACAG-----CAA----CT.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGGCAATAGTTAATTCT.....................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
....................................................................................................................................................................................................................................................................................................................GTGTGTGCA-------GCTCGTGCTG-GGTCTG-----------..................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................GATTA-GTTTGCGCCA------GTG----TGTGTG.........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................TT-GGCCAGTGTGTA------TAT-------------AT--GTG.........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TGCA-------GCTCGTGCTG-GGTCTG-----------A.................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................AA-A--TT----TTTTTC-TAC------------------ATCG---C-T................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................GTGGCCCCACACTCGATCCGGCTAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................A------CCAA--TTT----------------------TAAAGGGTGAC----A......................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ACTCGGC--GTAA---------------------------CTGTGGCCCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AAACTCGGC--GTAA---------------------------CTGTGGCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................GCTCGTGCTG-GGTCTG-----------AA-A--TT----TTTT..................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGGCAATAGTTAATTCTGAAAGG...............................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCGCATGAGGCAATAGTTAATTCTGAC..................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTTGGAGAAGTCATCAGCGC......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--TTT----------------------TAAAGGGTGAC----AAAA---ATG.............................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........ACTCGGC--GTAA---------------------------CTGTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCAGCGCCTTCAGCTGCA...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TCCGGCTATTGCGGTAA-G-----------------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TCTGATTA-GTTTGCGCCA------GTG----TGTG...........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................TGTGGCCCCACACTCGATCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................T----------TT-GGCCAGTGTGTA------TAT-------------A...............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CTACAAACTCGGC--GTAA---------------------------CTGTGGCCCCACACTCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................A------GTG----TGTGTGTGCA-------GCTCGTGCTG-GG.................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGTGAC----AAAA---ATGTTATT........................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CG---C-TTC-TCGCATGAGGCAATAGTTAA.........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................ACTCGATCCGGCTATTGCGAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAA------CCAA--TTT----------------------TAAAGGGTGG............................................................................................2141.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................GTGTGTGCA-------GCTCGTGCTG-GGTCTG-----------A.................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTTTGGAGAAGTCATCAGCGC......................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................ACACTCGATCCGGCTATTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................CAA-------ATTTCTGCGTCGGCT-TCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..........................................................................................................................................................................................................................................................................................A-GTTTGCGCCA------GTG----TGTGTGTGCA-------..............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................A-GTTTGCGCCA------GTG----TGTGTGTGC......................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
....................................................GGCCCCACACTCGATCCGGCTATTGCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................ACTCGATCCGGCTATTGCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................G----TGTGTGTGCA-------GCTCGTGCTG-G..................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................CAGTGTGTA------TAT-------------AT--GTGTCGC.....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................A------GTG----TGTGTGTGCA-------GCTCGTGCTG-G..................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.TCTACAAACTCGGC--GTAA---------------------------CTGTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CTCTACAAACTCGGC--GTAA---------------------------CTGTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................GTA------TAT-------------AT--GTGTCGCT----GTCTGATTA-G.....................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................A------GTG----TGTGTGTGCA-------GCTCGTG.......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................................................................................................................................................................................................................TGTGTGCA-------GCTCGTGCTG-GGTCTG-----------..................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................A------GTG----TGTGTGTGCA-------GCTCGTGCTG-GGTC...............................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.TCTACAAACTCGGC--GTAA---------------------------CTGTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TGTGTGCA-------GCTCGTGCTG-GGTCT..............................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TTTC-TAC------------------ATCG---C-TTC-TCGC.........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTCTGAAAGGGAAA------CCAA--TTT----------------------......................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTCATCAGCGCCTTCAGCTGC............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--TTT----------------------TAAAGGGTGAC----AAAA---ATGTT...........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CTACAAACTCGGC--GTAA---------------------------CTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--TTT----------------------TAAAGGGTGAC----AAA....................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................GTG----TGTGTGTGCA-------GCTCGTGCTG-GGT................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGGGTGAC----AAAA---ATGTTA..........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGAGAAGTCATCAGC........................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGAGAAGTCATCAGCGCCTTCAGC...............................2711.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGCTG-GGTCTG-----------AA-A--TT----TTTTTC-TA.............................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCGCATGAGGCAATAGTTAATTCTGA...................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................T----GTCTGATTA-GTTTGCGCCA------GT....................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGAAAGGGAAA------CCA..................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................CA-------GCTCGTGCTG-GGTCTG-----------AA-A--TT----......................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAAGGGAAA------CCAA--TTT----------------------TAAAGGG...............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
........................................................................................................................................................................................................................................................................................................................................GTGCTG-GGTCTG-----------AA-A--TT----......................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TCTACAAACTCGGC--GTAA---------------------------CTGTGGCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTTAATTCTGAAAGG...............................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTCTGAAAGGGAAA------G....................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA------CCAA--TTT----------------------TAAAGGGT..............................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA------CCAA--TTT----------------------TAAAGGGTAC............................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................A------CCAA--TTT----------------------TAAAGGGTGT............................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
droEre2
CTGTACAAAGTCGGC--TCAA----------------------------TCTGGCCCCACACTCGATCCAGCTTTTGCGGTAA-G-----------------AT--TTA--ATGATTCGCCA-------ATTTCTTCGTCGGC--TTTTAGCGACGCCCGGCACA----------------TACACGCATACACATTCGC--------TGT----------TT-GGCCAGTGTGTA------TAT-------------GT--GTGCCGCT----GTCTGATTA-GTGTGCGCCA------GTG----TGTGTGTGCA-------GCTCGTGCTG-GGTCTG-----------AAAA--AT----TTTTCC-TAT------------------ATCG---C-CCC-TTGCATGAGGCAATAGTTAAATGCGAGAGGGAAA------CAGA--TTC----------------------TGAAGGGCGAC----AAAA---ATGTTATTAATTTCCAGAACCCTTTGGAGAAGTCATCAGCGCCTCCAGCTGCAACAG-----CAA----CTCGTGC----SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAATGCGAGAGGGAAA------CA...................................................................................................................................2011.0010000010
............................................................................................................................................................................................................................................................................................................GTG----TGTGTGTGCA-------GCTCGTGCT.....................................................................................................................................................................................................................................................2211.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC----AAAA---ATGTTATTAATTTCCAG...............................................................2411.0011000000
..........................................................................................................................................................................................................................................................................................A-GTGTGCGCCA------GTG----TGTGTGTGC......................................................................................................................................................................................................................................................................2311.0010000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGAGAGGGAAA------CAGA--...............................................................................................................................1811.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................A------CAGA--TTC----------------------TGAAGGGCGAC----.......................................................................................1911.0010000100
droYak3
CTCTACATAATCGGC--GCAA---------------------------CTGTGGCCCCACACTCGATACAGCTTTTGCGGTAA-G-----------------AT--CTA--ATGATTCGCCA-------ATTTCTTCGTCGGC--TTTTCGCGACGCCCGGCACA----------------TACACGCATACACATTCGC--------TGT----------TT-GGCCAGTGTGTA------TAT-------------GT--GTGCCTCT----GTCTGATTA-GTGCGCGCTA------GTG----TGTGTGTGCA-------GCTCGTGCTG-GTTCTG-----------AA-A--AT----TTTTCC-TAT------------------ATCG---C-CCC-TTGCATGAGGCAATAGTTAAATGTGAGAGGGAAA------CACA--TTT----------------------TGAAGGGCGAC----AAAA---ATGTTATTAATTTCCAGAACCCTTTGGAGAAGTCATCAGCGCCTCCAGCTGCAACAG-----CAA----CTCGCGC----SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCGCCTCCAGCTGCA...........................2011.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--TTT----------------------TGAAGGGCGAC----AAAA---ATGTTA..........................................................................2511.00100000010000
..........TCGGC--GCAA---------------------------CTGTGGCCCCACACTCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
..CTACATAATCGGC--GCAA---------------------------CTGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..................................................................................................................................................TTTCGCGACGCCCGGCACA----------------TAA..........................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTAAATGTGAGAGGGA.............................................................................................................................................1911.00100000010000
droEug1
CTTCTCATATACGGC--AAAA---------------------------GTGTGGCCACGGAATCGATCTGGTTATTACGGTAT-G-----------------GCTTCGA--ATGATTCGCAACT-----TTTTTTTCGTCGGCG-TTTTCGCGACGCCCGGCG------------------------TATACACATTCGC--------ATT----------TT-GAACAGTGTGTA------TGTGTGT---------AT--GTACCGCT----GCCTGATTA-GTCTGTGTC--------TG----TGTGCGGGTA-------GCTCGTGCCTGCGTCTGAA------AA-AA-A--AT----TTTT---AAT------------------ATCG---G-CCG-TCGCATGAGGCAAAAGATAGATGTGAA-GGTAAA-----AA-C---T--------------------TC--TA--------AAAGAAAAA---ATGTTACTAATTTCCAGAACCATTTGGAGAAGTCATCACCGCCTCCTTCTACAACAA-----CAA----CTGGTGT----SizeHit CountTotal NormTotal
No Reads
droBia1
CTGTACGAACACGGC--GTAA---------------------------TTGTGGCCCCACAGTCGATCCGGTTTTTACGGTAC-A-----------------GCCCTTA--ATTACAAGCCA-------AGTTTTTCGTCGGC--TTTTCGCGACGCCCGGCACA----------------TACGCGCATACACACACGC--------ACT----------TTTGGACAGTGTGTA------TGTGT-----------GT--GTGCCGCT----GTCTGATTA-GCGTGCGCC--------TG----TGTGTGTGCA-------GCTCGTGCTGGGGTCTG-----------AA-A--AT----TTTTCC-TAC-------AT-------ATATCAGCGC-CCA-TTGCATGAGGCAATAGTTGG-----------AAA------A-CA--TTT-----AAA---------------AAAAAT----CAAACAAA---ATGTTACTAATTTCCAGGACTATCTGGCGAAGTCATCAGCGCCTGCAGCTGCAACAA-----CAA----CTCGTGC----SizeHit CountTotal NormTotal
No Reads
droTak1
CTGTACGAACACGGC--GTAA---------------------------TTGTGGCCCCACAGTCGATCCAGTTATTAAGGTAC-A-----------------GCTCTTG--ATTATTCGCCT-------AATTTTAGGTCGGCT-TTTTCGCGACGCCCGGCACA----------------TACGCGCATACACATTCGC--------ATT----------TTGGGCCAGTGTGTA------TATGT-----------GT--GTGCCGCT----GTCTGATTA-GTGTGCGCC--------TG----TGTGTGTTCA-------GCTCGTGCTGGGGTCTG-----------AA-AAAAT----TTTTCC---TTTCCTACAT-------ATATCG---C-CCG-CTGAATGAGGCAATAGTTG---------GGG--A------GCA-ATTACTAACAGAAAAAAACC-------------GCA----AAAAAA---ATGTTACTAATTTCCAGGACCCTCTGGCGAAGTCATCAGCGCCTCCAACTGCAGCAG-----CAA----CTCGTGC----SizeHit CountTotal NormTotal
No Reads
droEle1
GTGTACGAAACCGGC--GTAA---------------------------TTGTGGCCCCACAATCGGTCAAGTTAATACGGTAA-A-----------------GCCTCCT--ATAATTCGCCA-------ACTTTTTCGTCGGCA-TTTTCGCGACGCCCGGCACG----------------TACACGCATACACACTCGC--------T-C----------TT-GGACAGTGTGTG------TATAT-----------GT--GTGCCGCC----GTCTGATTA-GTGTGCGCCT------GTG----TGTGTGTGTA-------GCTCGTGCTGGGGTCTG-----------AA-A--AT----TTTTTCTTAT------------------ATCG---C-CCCGTTGCATGAGGCAATAGTTAAATTAGA--GGG--C--CAAATTA-----------------------AGC----------TACAAAAAAAT---ATGTTGTTAATTTCTAGGACCCTTTGGCGAAGCCATCAGCGCCTGCAACTGCAACAA-----CAA----CTCGTGC----SizeHit CountTotal NormTotal
No Reads
droRho1
CTGCGGGAATACAGC--GCAA---------------------------TTGTGGCCCCACAATCGATCCAGTTAATACGGTAACA-----------------GCCTCCA--ATAATTCGCCA-------ACTTTTTGGTCGGCA-TTTTCGCGACGCCCGGCACA----------------TACACGCATACACATTCGC--------CTC---TC-----TT-GGAGAGTGTGTG------TACAT-----------GT--GTGCCGCC----GTCTGATTA-GTTTGCGCC--------TG----TGTGTGTGTA-------GCTCGTGCTGGGGTCTG-----------AA-A--AT----TTTTCC-TAT------------------ATCG---C-CCG-CTGCATGAGGCAATAGTTAAATAAAA--GGG--T--CAAAATA-----------------------AAC--T--------ACATCAAAAA---ATGTTGTTAATTTCCAGAACCCTTTGGCGAAGCCATCAGCGTCTGCAACTGCAACAA-----CAA----CTCGTGC----SizeHit CountTotal NormTotal
No Reads
droFic1
CTGTCGAACTCCAGC--GTAA---------------------------TTGTGGCCCCGCACTCGAAAAACTTAATACGGTAG-G-----------------GCTGCTT--ATAATTCGGAC-------ACTTTTTCGTCGGCA-TTTTCGCGACGCCCGGCACA----------------TACACGCATACAAATTCGC--------TTC----------TT-GGACAGTGTGTA------TAT-------------GT--GTAGCGGT----GTCTGATTA-GTTTCC-CCT------GAG----TGTGTGTGTA-------GCTCGTGCTGGGGTCTA-----------AA-A--AT----TTTT-------------------------TCG---C-TCG-CTGGATGAGGCAATACTTAAATGTGAGGGGGAA--------TA-ATT--------------------GC----------TACAAAAAACA---ATGTTACTAATTTCCAGGACCCTTTGGCGAAGCCATCAGCGCCTGCAACTGCAACAA-----CAA----ATCGTGA----SizeHit CountTotal NormTotal
No Reads
droKik1
CTGTCCAACTACGGC--ATAA---------------------------TTGTGGCCCCACAATCGATCCAATTGCTGCGGTAC-G-----------------TTCTTGG--GTAATTGGCAG-------TCTTTTTCGTCGGCG-TTTTCGCGACGCCCGGCACA----------------TACACGCACACACTTG-----------------------------AAATTGTGTA------TGT-----------------GTGCA-GT----GTCTGATTGTGAGTGCGCCA------GTGTATGTGTGTGTGTA-------GCTCGTGCGG-GGTCCA-----------------ATTT--TTTTCA-TAT------------------ATCG---CACCG-CCGCATGAGGCTAG-----------------AAA------ATC------------------------GC------------CTTAAAAAT---ATGTTGTTAATTTCCAGGGCTCTTTGGCGAAGTCACCAGCGACTGCAACTGCATCAG-----CAA----CTTGTGC----SizeHit CountTotal NormTotal
No Reads
droAna3
AT--------ACGGT--GT-A---------------------------TTGTGGCCCCACAGTTGACCCAACTGATCCGGTAC-G-----------------CTTATCT--ATTATTCGCAG----------TTTTCGTCGGCA-TATTTGCGACGCCCGGCACATCAAC------------TCACCCCTACACATGAA--------------------------GATTTTGTGTA------TGT-----------------GT-CCGCT----GTCTGATTGTGCGTGCGCAT------GTG--TGTGTGTGTGTG-------ACTCGTGCTGGGGTCCGAACAGAAAAA-AA-A--AT----TTTT---TATTTCTT--------------------C-CTT-CTGCATGAGGCAATTGTTAAATGCCCGTAG-AA-------TTC------------------------GT------------TTTTAAAAA---ATGTTACTAATTTCCAGAACTCTTTGGCGAAGTCACCAGCGGGTGCTTCTGCAGCAA-----CAA----CTAGTGC----SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................GTGCGTGCGCAT------GTG--TGTGTGTGTG.......................................................................................................................................................................................................................................................................2511.001000001
......................................................................................................................................................................................................................................................................................................................GTGTGTG-------ACTCGTGCTGG...................................................................................................................................................................................................................................................1811.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCGAAGTCACCAGCGGGTGC..................................2311.001010000
...............................................................................................................................................................................................................................................................................................TGCGCAT------GTG--TGTGTGTGTG.......................................................................................................................................................................................................................................................................2040.251100000
droBip1
AT--------ACGGT--GT-A---------------------------TTGTGGCCCCACAGTTGACCCAACTGATCCGGTAC-G-----------------CTTATCT--ATTATTCGCAG----------TTTTCGTCGGCA-TATTTGCGACGCCCGGCACATCAAC------------TCACCCCTACACATGA--------------------------AGCTATTGTGTA------TGT-----------------GT-CCGCT----GTCTGATTGTGCGTGCGCA--------TG----TGTGTGTGTG-------ACTCGTGCTG-GGTCCGAA------AAAAA-A--AT----TTTT----ATTTCTT--------------------C-CAT-CTGCATGAGGCAATGGTTAAATGCCCCAAG-AA-------TTC------------------------GT-------------TCTAAAAA---ATGTTACTAATTTCCAGAACACTTTGGCGAAGTCACCAGCGGGTGCTTCTGCAGCAA-----CAA----CTAGTGC----SizeHit CountTotal NormTotal
No Reads
dp5
TTAACAAA----AGA--GCAA---------------------------TTCTGGCCTTGCAAGCGCTTCACCTACTACGGTAC-G-----------------TT--CTCATCGAGTTTGGCA-------TGTTTTTCGTCGGCA-TTTTCGCGACGCCCGGCACA----------------CAGTCGC-------------------------------------GATATTGTGTA------TGTGTGCAGTTGAG-TCCAATTGCCACT----GTATGCGTT-GTGTGTATG--------TG----TGTGTGTGTG-------TCTCGCGCTG-GGTCTG-----------AA-A--AT----TTTT---TAC------------------ATCA---G-CGC-TTGCATGCGGCCATAATTAAATAAAAA-----------------------------------ACGC-GATTTGT--------TTAACAAA---ATGTTATTAATTTCCAGGACGATTTGGCGTAGTCACCAGAGACTGCAACTACAAGCA-----GCA----CTCGTGC----SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGCGTAGTCACCAGAGA......................................2211.0010100000000
.................................................................................................................................................................CACA----------------CAGTCGC-------------------------------------GATATTGTGTA------................................................................................................................................................................................................................................................................................................................................................2211.0010000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTACAAGCA-----GCA----CTCGTG.....2111.0010100000000
..........................................................................................................................................................................................................................................................................................T-GTGTGTATG--------TG----TGTGTGTG.......................................................................................................................................................................................................................................................................20200.0510000001000
droPer2
TTAACAAA----AGA--GCAA---------------------------TTCTGGCCTTGCAAGCGCTTCACCTACTACGGTAC-G-----------------TT--CTCATCGAGTTTGGCA-------TGTTTTTCGTCGGCA-TTTTCGCGACGCCCGGCACA----------------CAGTCGC-------------------------------------GATATTGTGTA------TGTGTGCAGTTGAG-TCCAATTGCCACT----GTATGCGTT-GTGTGTGTG--------TG----TGTGTGTGTG-------TCTCGCGCTG-GGTCTG-----------AA-A--AT----TTTT---TAC------------------ATCA---G-CGC-TTGCATGCGGCCATAATTAAATAAAAA-----------------------------------ACGC-GATTTGT--------TTAACAAA---ATGTTATTAATTTCCAGGACGATTTGGCGTAGTCACCAGAGACTGCAACTACAAGCA-----GCA----CTCGTGC----SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................CACA----------------CAGTCGC-------------------------------------GATATTGT.........................................................................................................................................................................................................................................................................................................................................................1912.002200000
droWil2
TTTTAAAAAGTTCGT----AGTTTTGCATTCGAAAATCAAAAAGAGAATACTGGCACTTCAATCGCTTGCCTTGCTAAGGTAA-ATGAGTAATAAG------A----------ATTACGCTC-------ATTTTCACATCGGCATTTTTCGCGACGCCCGGCAATTGCAGACTAACATACATACACACACACACACACACAGGGAAAAGTT---TTATGTATA-TAATTTTGTGCC------TGTGTGT---------GT--GTGC--------------------------CAGTGCGTTTG----TGTGTGT--TGTATGGGGCTCGTGGTG-CGCCAG-----------AA-A--ATCTATTTTT---TTT----TTCAACTGAATC--ATGA---A-ATA-TTGCA-----------------------GAG-----CA----A-ATT--------------------GC--TA-AAA----TAAAAAATA---ATGTTATTGATTTCTAGAAACATTTGGCGTAGTCAGCAGCAATTGCAGCTACAACAATTGGTCAAAGGATT-TGGC----SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................ATC--ATGA---A-ATA-TTGCA-----------------------GA...............................................................................................................................................1812.00200020
............................................................................................................................................................................................................................................................................................................................TGTATGGGGCTCGTGGTG-CGC................................................................................................................................................................................................................................................2111.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATTGGTCAAAGGATT-TGGC----2311.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTCAAAGGATT-TGGC----1911.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................AACTGAATC--ATGA---A-ATA-TTGCA-----------------------GAG-----C........................................................................................................................................2611.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................ACTGAATC--ATGA---A-ATA-TTGCA-----------------------.................................................................................................................................................2111.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCAGCAGCAATTGCAGC...............................1911.00100010
......................................................................................................................................................................................................................................................................GTGC--------------------------CAGTGCGTTTG----TGT............................................................................................................................................................................................................................................................................1811.00100001
.....................................................................................................................................................................................................................................TTGTGCC------TGTGTGT---------GT--GTGC--------------------------CA............................................................................................................................................................................................................................................................................................2211.00100001
.................................................................................................................................................................................................................................AATTTTGTGCC------TGTGTGT---------GT--............................................................................................................................................................................................................................................................................................................................2011.00100100
......................................................................................................................................................................................................................................................................................................................GTGT--TGTATGGGGCTCGTGGTG-CGCCA..............................................................................................................................................................................................................................................2711.00100010
....................................................................................................................................................................................................................................TTTGTGCC------TGTGTGT---------GT--GTGC--------------------------CA............................................................................................................................................................................................................................................................................................2311.00100001
droVir3
TACTAAAAATTAAGA--ATA----------------------------TAAT---------AACCGTTACGTTGTTAAGGTAA-G-----------------CGCGAAT--AGCAATTGCAAATTGGTCAATAGCTCGTCGGCG-TTTTCGCGACGCCCGGCACA----------------GACACAAACATGCA---------------------------------------TATATGTATGT----ACATGACATAC--GTA--CACGCACACATAGGTT-ATCTTCAAA--------TG----TGTGTGTGGT-------TCTCGTGCTTTGAAAAG-----------AA-A--AT----TT------AT------------------ATCG---G---C-TTGCAA-AGGCGCAA----TCCGCGTGAGTGAAAATCAAAGCT------------------------GCT----------TTAAATTAAA---ATGCTATTCGTTTACAGAAACGTTTGGCGTTGTCAGCAGCCCCGACTACTCCAAC---------------T-CTGC----SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCAGCCCCGACTACTCC............................2111.001000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................................................AG-----------AA-A--AT----TT------AT------------------ATCG---G---C-T............................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTACAGAAACGTTTGGC....................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTTTGGCGTTGTCAGCAGCCCCGA...................................2611.001001000000000000000000000000000000000000000000000000000000000000
.................................................AAT---------AACCGTTACGTTGTTAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGAAACGTTTGGCGTTGT...............................................2211.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................CAAA--------TG----TGTGTGTGGT-------TC............................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTGAAAATCAAAGCT------------------------G.........................................................................................................2011.001000000000000000000000000000100000000000000000000000000000000000
........ATTAAGA--ATA----------------------------TAAT---------AACCGTTACGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
droMoj3
ACGTAATAACTC-CC--GCAA---------------------------TTGTGTTAAAGATAGACATCATATTGCTTAGGTAA-G-----------------CGCGAAT--ACCAATTGCAAATTGGTCAATAGCTCATCGGCG-TTTTCGCGACGCCCGGCACA----------------GACACACACACACATGCAC--------AGTCAACA-----TA-AGCAAGTACACG------TAT-------------AT--ACGCACACGCACGCATAGGTT-TTTGGTAAA--------TG----TGTGAGTGCT-------GCTCGTGCTTAGAAAAG-----------AA-C--AT----TTTT----TT------------------ATCG-------G-TTGCAAAAGGCGCAA----ACTGTGCGAGGGAAAAGCGC-AAC------------------------GCT----------TTAAATTAAA---ATGCTTATAATTTCCAGAAACGTTTGGCGTTGTCAGCAGCAGCGACTGCTACAATTG---GGGAA----ATCATCA----SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................TCAATAGCTCATCGGCG-TTTTCGCGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
droGri2
ATTTTAAT--TC-GCACAAAA---------------------------TTGAGCTACATAAATCCATCATATTGCTAAGGTGA-GCG--CAATAGTACCACAA---TAG--CAAATTGGT-C-------AATAGCTCGTCGGCG-TTTTCGCGACGCCCGGCACTCA--------------CACATGCACACGCATTCAA--------ATG----------TT-TGTATGTACACG------TAT-------------AT--GTA--CACGCACACATAAAAA-CAGCGTTTCA------ATG----TGTATGT--GG-TTGGTGCTCGTGCTTTGAAAAG-----------AA-A--AT----TATT-----T------------------ATCG---G---C-TTGCAAGAGACGCAC----ACCGTGTGAGTGAAGAGCGA-----------------------AAGC-GCTTTAT--------AAAACAAAATGTTGTTAATAATTTGCAGAAACCTTTGGCGTTGCCAGCAGCAG---------CAGCAT-----CAA----CTACTGCTTCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................TGAGCTACATAAATCCATCATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110

Generated: 05/18/2015 at 10:55 AM