ID:

dsi_24283

 Coordinate:

2r:13131109-13131289 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-44.0 -43.9 -43.8

Flybase annnotation

CDS [2r_13131290_13131298_-]; five_prime_UTR [2r_13131299_13131338_-]; exon [2r_13131290_13131338_-]; exon [2r_13131020_13131108_-]; CDS [2r_13131020_13131108_-]; intron [2r_13131109_13131289_-]

No Repeatable elements found

Sense Strand Reads

-#################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################

TGCCTTAAATCTCTTTCCGTTTTTGTGCGCAACCAAAAAAGATGGCCGATGTAAATATCTAATACAAAATCCAATGAAAAACTCGGCATCCGTGCGGTAATCAAACAAAATGCCAAACGAAACACAATTAGAAGACTTCGTTGCACGGCTGCTGATGTTATTCTGGAGTTTCGCAGCGCGATTTACCGGCTAAATGGAAACTAATGTCGGTGTTTTTTTCGTTCTATGCAGCAAGTCGATGAAAGTCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA

***************************************************..................((((..(((.(((((((((.((((((((((...........)))).((((((...............)))))))))))).)))))).))).)))))))(((.((.((.((((..(((((((...............)))))))......)))).)).)).)))..............*********************************** 		Read size # Mismatch Hit Count Total Norm Total M025

embryo

 M053

female body

 SRR553485

Chicharo_3 day-old ovaries

 SRR553486

Makindu_3 day-old ovaries

 M024

male body		 SRR618934

dsim w501 ovaries

 SRR553487

NRT_0-2 hours eggs

 GSM343915

embryo

 SRR553488

RT_0-2 hours eggs

 SRR902008

ovaries

 SRR902009

testis

 M023

head

 O002

Head

 O001

Testis
......................................................................................................................................................................................................................................TCAAGTCGATGAAAGTCTGAAGAAGA......................... 26 1 1 52.00 52 4 1 15 13 0 3 12 0 4 0 0 0 0 0
.............................................................................................................................................................................................................................................GATGAAAGTCTGAAGAAGAAGC...................... 22 0 1 17.00 17 11 1 0 0 4 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................GATCAAGTCGATGAAAGTCTGA............................... 22 2 1 10.00 10 4 1 0 0 2 0 0 3 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CAAGTCGATGAAAGTCTGAAGAAGA......................... 25 0 1 10.00 10 0 1 2 5 0 0 2 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................TGAAAGTCTGAAGAAGAAGCGTACCTTC.............. 28 0 1 8.00 8 0 0 1 2 0 0 0 0 1 3 1 0 0 0
.....................................................................................................................................................................................................................................ATCAAGTCGATGAAAGTCTGAAGAAGA......................... 27 1 1 7.00 7 1 0 2 3 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................................ATGAAAGTCTGAAGAAGAAGCGTACCT................ 27 0 1 6.00 6 3 2 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ATCAAGTCGATGAAAGTCTGAAGA............................ 24 1 1 6.00 6 5 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................ATGAAAGTCTGAAGAAGAAGC...................... 21 0 1 6.00 6 4 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................CGATGAAAGTCTGAAGAAGAAGC...................... 23 0 1 6.00 6 3 2 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................TGAAAGTCTGAAGAAGAAGCGTACCTT............... 27 0 1 5.00 5 0 1 0 1 0 2 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAGAAGAAGC...................... 25 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................GATCAAGTCGATGAAAGTCTGAAGAAGA......................... 28 2 1 4.00 4 0 1 2 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................GATCAAGTCGATGAAAGTCTGAAGA............................ 25 2 1 4.00 4 1 0 1 0 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................GATGAAAGTCTGAAGAAGA......................... 19 0 1 4.00 4 0 1 0 0 0 0 0 3 0 0 0 0 0 0
..........................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAGAAGAAGCGT.................... 27 0 1 4.00 4 0 0 0 0 0 0 2 0 1 1 0 0 0 0
....................................................................................................................................................................................................................................GATCAAGTCGATGAAAGTCTGAA.............................. 23 2 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAGA............................ 19 0 1 4.00 4 2 0 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CAAGTCGATGAAAGTCTGAAGAAGAAGC...................... 28 0 1 4.00 4 1 1 0 1 1 0 0 0 0 0 0 0 0 0
..................................................................AAATCCAATGAAAAACTC..................................................................................................................................................................................................... 18 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................TCGATGAAAGTCTGAAGAAGAAGCGTA................... 27 0 1 3.00 3 0 0 0 0 0 0 0 0 0 1 2 0 0 0
..........................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAGTT...... 25 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAGAAGA......................... 22 0 1 3.00 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................GATCAAGTCGATGAAAGTCTG................................ 21 2 1 3.00 3 0 2 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CAAGTCGATGAAAGTCTGA............................... 19 0 1 3.00 3 2 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................TCGATGAAAGTCTGAAGAAGAAGCG..................... 25 0 1 3.00 3 0 0 0 0 0 0 1 0 0 2 0 0 0 0
....................................................................................................................................................................................................................................GATCAAGTCGATGAAAGTCT................................. 20 2 2 3.00 6 1 4 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................GTCTGAAGAAGAAGCGTACCTTCAA............ 25 0 1 3.00 3 0 0 0 0 0 2 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................AAGTCGATGAAAGTCTGAAGAAGA......................... 24 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................AAAGTCTGAAGAAGAAGCGTACCT................ 24 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 1
..............TTCCGTTTTTGTGCGCAACC....................................................................................................................................................................................................................................................... 20 0 1 2.00 2 0 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................CGTACCTTCAAGAAGTTCACCT. 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ATCAAGTCGATGAAAGTCT................................. 19 1 2 2.00 4 3 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CAAGTCGATGAAAGTCTGAAGAAGAA........................ 26 0 1 2.00 2 0 0 0 1 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................TCAAGTCGATGAAAGTCTGAAGAAGAA........................ 27 1 1 2.00 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................................................GTCTGAAGAAGAAGCGTACCTTCAAGA.......... 27 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTTCACC.. 23 0 1 2.00 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAGAAGAAGCGTA................... 28 0 1 2.00 2 0 0 0 0 0 0 0 0 0 1 1 0 0 0
........................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTT............... 18 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................TGTGCGCAACCAAAAAAGATGGCCGA........................................................................................................................................................................................................................................ 26 0 1 2.00 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CAAGTCGATGAAAGTCTGAAGA............................ 22 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0
...............TCCGTTTTTGTGCGCAACCAAAAAAGA............................................................................................................................................................................................................................................... 27 0 1 2.00 2 0 0 0 1 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................AGAAGCGTACCTTCAAGAAGTT...... 22 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................CGATGAAAGTCTGAAGAAGAAGCGTA................... 26 0 1 2.00 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0
............................................GCCGATGTAAATATCTAATACA....................................................................................................................................................................................................................... 22 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0
....................................................................................................................................................................................................................................GATCAAGTCGATTAAAGTCTGA............................... 22 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................ATGGCCGATGTAAATATC.............................................................................................................................................................................................................................. 18 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0
............................................................................................................................................................................................................................................CGATGAAAGTCTGAAGAAG.......................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................TGAAAGTCTGAAGAAGAAGCGTACC................. 25 0 1 2.00 2 0 0 0 0 0 1 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................GCGTACCTTCAAGAAGTTC..... 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
............................................................AATACAAAATCCAATGAAAAACTCGGCA................................................................................................................................................................................................. 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CAAGTCGATGAAAGTCTGAA.............................. 20 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................GTCTGAAGAAGAAGCGTACCG................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................TGAAAGTCTGAAGAAGAAGCGTACCT................ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAGA.......... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................GATGAAAGTCTGAAGAAGAAGCGTA................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................GATGAAAGTCTGAAGAA........................... 17 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ATCAAGTCGATGAAAGTCTGA............................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ATCAAGTCGATGAAAGTCTGAAGAAGG......................... 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ATCAAGTCGATGAAAGTCTGAAAAAGA......................... 27 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................TTGTGCGCAACCAAAAAAG................................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................TTATTCTGGAGTTTCGCAGCGCGTTT.................................................................................................. 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GCAAGTCGATGAAAGTCTGAA.............................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................TGAAGAAGAAGCGTACCTTCAAGAAGT....... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TCAAGTCGATGAAATTCTGAAG............................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................TCTGAAGAAGAAGCGTACCTTCAAGAAGT....... 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGA......................... 19 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................GATCAAGTCGATGAAAGTCTGG............................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................CCGTTTTTGTGCGCAACC....................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................TGAAAAACTCGGCATCCGTGCGGGA...................................................................................................................................................................................... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................GCGCAACCAAAAAAGATGGCC.......................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................GTTTTTGTGCGCAACCAAAAAA................................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................TTTGTGCGCAACCAAAAAAGATGGCCGA........................................................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........CTCTTTCCGTTTTTGTGCGCAACCGG..................................................................................................................................................................................................................................................... 26 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................AAGTCGATGAAAGTCTGAAGAAGAAGC...................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TGAATGGAAACTAATGTCGGT...................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................TTGTGCGCAACCAAAAAAGATGGCC.......................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................GTCTGAAGAAGAAGCGTAC.................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................TGTGCGCAACCAAAAAAGATGGC........................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................CGATGAAAGTCTGAAGAAGAAGCG..................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................CGTTTTTGTGCGCAACCAAAAAA................................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................ACCAAAAAGGATGGCCGA........................................................................................................................................................................................................................................ 18 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................GCGCAACCAAAAAAGATGGCCGA........................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................GAAGCGTACCTTCAAGAAGTT...... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................TGTGCGCAACCAAAAAAGATGGCCGATC...................................................................................................................................................................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAGAAGAAG....................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................CGTACCTTCAAGAAGTTC..... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GTTTTTTTCGTTCTATGCAG.................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TGCAGCAAGTCGATGAAAGTCTGAAGA............................ 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................TGGCCGATGTAAATATCTAA........................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAGAAGAA........................ 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TCAAGTCGATGAAAGTCTGAAGA............................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................AATTAGAAGACTTCGTTGCACGGC.................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................ATGAAAGTCTGAAGAAGA......................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TTAGAAGACTTCGTTGCACGGCTGC................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............TTCCGTTTTTGTGCGCAACCAAAAAAGA............................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................GATGAAAGTCTGAAGAAG.......................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................AAGTCTGAAGAAGAAGCGTACCTTCAA............ 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....................TTTTGTGCGCAACCAAAAAAG................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................TCGATGAAAGTCTGAAGAAA.......................... 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TGCAGCAAGTCGATGAAAGTCTGAAGAA........................... 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGA.......... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................TCGATGAAAGTCTGAAGAAGAAGC...................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TCAAGTCGATGAAAGTCTGAAGAAGG......................... 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............CTTTCCGTCTTTGTGCG............................................................................................................................................................................................................................................................ 17 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................TTTGTGCGCAACCAAAAAAGATGGC........................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................AGAAGCGTATCTTCAAGAAGTTCACC.. 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAG............................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................TACCTTCAAGAAGTTCACC.. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.....................TTTGTGCGCAACCAAAAAAGA............................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................ATCTAATACAAAATCCAA............................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................................................AGTCGATGAAAGTCTGAAGAAGAAGCGT.................... 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........TCTTTCCGTTTTTGTGCGCAACCAAAAA.................................................................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................GTGCGCAACCAAAAAAGATGGCC.......................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TCAAGTCGATGAAAGTCT................................. 18 1 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................AGTCGATGAAAGTCTGAAGAAG.......................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................TGAAGAAGAAGCGTACCTTC.............. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................AACACAATTAGAAGACTTCGTTGCACGGC.................................................................................................................................... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................GAAAGTCTGAAGAAGAAGCGTACC................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................TTTGTGCGCAACCAAAAAAGATGGCC.......................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................CTGAAGAAGAAGCGTACCTTCAAGAAGT....... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................TCGATGAAAATCTGAAGAAGAAGCG..................... 25 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................AAGTCGATGAAAATCTGAAG............................. 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................CGATCAAGTCGATGAAAGTCTGAA.............................. 24 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TCCAATGAAAAACTCGGCATCCGTGCGCAA...................................................................................................................................................................................... 30 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
............................GCAACCAAAAAAGATGGCCGATCAA.................................................................................................................................................................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TCAAGTCGATGAAAATCTGAAGAAGA......................... 26 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................CTGAAGAAGAAGCGTACCT................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTTCAA............ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..............................................................................................................TGCCAAACGAAACACAATTAGAAGAC................................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CAAGTCGATGAAAGTCTGAAG............................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................TGTGCGCAACCAAAAAAGA............................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................TTTTGTGCGCAACCAAAAAAGATGGC........................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ATCAAGTCGATGAAAGTCTGG............................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TTTTGTGCGCAACCAAAAAAGA............................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................CCAAAAAAGATGGCCGAA....................................................................................................................................................................................................................................... 18 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................GATGAAAGTCTGAAGAAGAAGCGTAC.................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CAAGTCGATGGAAGTTTGA............................... 19 2 2 1.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TCAAGTCGATGAAAGTCTGA............................... 20 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................AAATCCAATGAAAAACTCG.................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.......................TGTGAGCAACCAAAAAAGATGGCC.......................................................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................................AAGTCTGAAGAAGAAGCGTACCTTCAAGA.......... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................TGAAAGTCTGAAGAA........................... 15 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................ATGAAAGTCTGAAGAAGAAGCGTAC.................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..................GTTTTTGTGCGCAACCAAAAAAGATG............................................................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TCAAGTCGATGAAAGTCTGAAGACGA......................... 26 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ATCAAGTCGATGAAAGTCTGT............................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................ATGAAAGTCTGAAGAAGAAG....................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................TGTGCGCAACCAAAAAAGATGGCCGAT....................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................TTGTGCGCAACCAAAAAAGATGGCCGAT....................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TCCAATGAAAAACTCGGCATCCGTGCGGT....................................................................................................................................................................................... 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................ATGCAAGTCTGAAGAAGAA........................ 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................ATTAGAAGACTTCGTTGCACG...................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAGAAGTTCACC.. 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TCAAGTCGATGAAAGTCTGAAGAAG.......................... 25 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................ATGAAAGTCTGAAGAAGAA........................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................AGTCTGAAGAAGTAGCGTACCTTCAA............ 26 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................GAAGTCGATGAAAGTCTGAAGAAGA......................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TCACGTCGATGAAAGTCTGAAGAAGA......................... 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................GATCAAGTCGATGAAAGT................................... 18 2 5 0.80 4 2 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................GATCAAGTCGATGAAAGTC.................................. 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ATCAAGTCGATGAAAGTC.................................. 18 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................CGATCAAGTCGATGAAAGTCT................................. 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................AAGTCGATGGAAGTTTGAGGA............................ 21 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................AAAAAAATGGCCGTTGTAA................................................................................................................................................................................................................................... 19 2 7 0.29 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................CGCAAGTCGATGGAAGTTTGA............................... 21 3 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................AATTCGATGAAAGTCT................................. 16 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................AGTCGATGGAAGTTTGA............................... 17 2 8 0.13 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................GCTGATGGTAGTGTGGAGTT............................................................................................................... 20 3 9 0.11 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................GATGAAAGTCTGACGGA........................... 17 2 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................AATGAAACACTCGGGATCCG............................................................................................................................................................................................. 20 2 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................AAAGTCTGAAGAACAAGT...................... 18 2 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................CTGATGGTAGTGTGGAGTT............................................................................................................... 19 3 15 0.07 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................GCATCGCGATCGACCGGCT.......................................................................................... 19 3 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ACGGAATTTAGAGAAAGGCAAAAACACGCGTTGGTTTTTTCTACCGGCTACATTTATAGATTATGTTTTAGGTTACTTTTTGAGCCGTAGGCACGCCATTAGTTTGTTTTACGGTTTGCTTTGTGTTAATCTTCTGAAGCAACGTGCCGACGACTACAATAAGACCTCAAAGCGTCGCGCTAAATGGCCGATTTACCTTTGATTACAGCCACAAAAAAAGCAAGATACGTCGTTCAGCTACTTTCAGACTTCTTCTTCGCATGGAAGTTCTTCAAGTGGAT

***********************************..................((((..(((.(((((((((.((((((((((...........)))).((((((...............)))))))))))).)))))).))).)))))))(((.((.((.((((..(((((((...............)))))))......)))).)).)).)))..............*************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023

head

 SRR902009

testis

 M053

female body

 O001

Testis

 SRR902008

ovaries

 M024

male body		 SRR618934

dsim w501 ovaries

 SRR553488

RT_0-2 hours eggs

 SRR553486

Makindu_3 day-old ovaries
..................................................................................................................................................................................................................................................................GCATGGAAGTTCTTCAAG..... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0
............................................CGGCTACATTTATAGATTATG........................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................CTGAAGCAACGTGCCGACGACT.............................................................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0
......................................................................................GTAGGCACGCCATTAGTTTGT.............................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................TCGGATGGAAGTGCTTCATGT.... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................ATGGCCGATTTTCCCTTGATTC............................................................................ 22 3 3 0.33 1 0 0 0 0 1 0 0 0 0
............................CGTTAGTTTTTGCTGCCGGC......................................................................................................................................................................................................................................... 20 3 8 0.25 2 0 0 0 0 0 2 0 0 0
.....................................TTTTTACCGGCGACATTTAGA............................................................................................................................................................................................................................... 21 3 5 0.20 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................CGCTGAATGGTCGATTTA...................................................................................... 18 2 6 0.17 1 0 0 0 0 0 0 1 0 0
.......................ACAAGCGTTGGTTTT................................................................................................................................................................................................................................................... 15 1 14 0.07 1 0 0 0 0 0 0 0 0 1
.........................................................................................................................................................................................GGTTGATTTACATTTGATTAC........................................................................... 21 3 15 0.07 1 0 0 0 0 0 0 0 1 0
................................................................GTTTCAGGTTACTTTT......................................................................................................................................................................................................... 16 1 20 0.05 1 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................TGCCTCAAAGCGTCGC....................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:13131059-13131339 - dsi_24283 TGCCTT-A-AATCTCTTTCCGTTTTT---GTGCGC-AACCAAAA----------AAGATGGCCGATGTAAATA-TC----------TAATACAAAATCCAATGAAAAACTCGGCATCCGTGCGGTAATCAAACAAAATGCCAAACGAAACACAATTAGAAGACTTCGTTGCACGGCTGCTGA-TGTTATTC-TGGAGTTTCGCAGCGC-GATTTACCGGCTAAATG--G----A------------AACTAATGTCG-G-TGTTTT-TT------TCGTTCTA--------------------T---GCAGCAAGTCGATGAAAGTCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA
droSec2 scaffold_1:9956610-9956890 - TGCCTT-A-AATCTCTTTCCGTTTTT---GTGCGC-AACCAAAA----------AAGATGGCCGATGTAAATA-TC----------TAATACAAAATCCAATGAAAAACTCGGCATCCGTGCGGGAATCCAACAAAATGCCAAACGAAACACAATTAGAACACTTCGTTGCACGGCTGCTGG-TGTTATTC-TGGAGTTTCGCTTCGC-GATTTACCGGCTAAATG--G----A------------AACTAATGTCG-G-TGTTTT-TT------TCGTTCTA--------------------T---GCAGCAAGTCGATGAAAGTCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA
dm3 chr2R:12458461-12458743 - TGCTTT-A-AATCTCTTTCCGTTTTT---GTGCGC-AACCAAAA----------AAGATGGCCGATGTAAATA-TC----------TATACAAAAATCCAATGAAAAACTCGGCATCCGTGCGGGTATCGAACAAAATGCCATACGAAACACCATTAGAAGACTTCGTTGCACGGCTGCTGA-TGTTATTC-TGGAGTTTCGCAGCGC-GATTTACCGGCTGAATGT-G----A------------AACTAATGTCG-G-TGTTTTTTT------TCGTTCTA--------------------T---GCAGCAAGTCGATGAAAATCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA
droEre2 scaffold_4845:13402044-13402323 + der_197 TGCCTT-A-AATCTCTTTCCGTTTTT---GTGCGC-AACCAAAA----------AAGATGGCCGATGTAAATA-TC----------TGTTC-AAAATCCAATGAAAAACTCGGCATCCGTGCGGGAATCGAACAAAATGCCATGCGAAACACAACTAAAAGACATTGCCGCACGGCTGCTGA-TGTTATTC-CGGAGTTTCCCAGCGA-GATTTTCCGGCTAAATG--G----A------------AACTAATGTCG-G-TGTTTT-TC------TCGTTTTA--------------------T---TCAGCAAGTCGATGAAAATCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA
droYak3 2R:16525911-16526190 + dya_593 TGCCCT-A-GATCTCTTTCCGTTTTT---GTGCGC-AACCAAAA----------AAGATGGCCGATGTAAATA-TC----------TATCC-AAAATCCAATGAAAAACTCGGCATCCGTGCGGGAATCGAACAAAATGCTATACGAAACACAACTAGAAGACTTTGCCGCACGGCTGCTGA-TGTTATTC-CGGAGTTTTCCAGCGA-GATTTTCCGCATAAATG--G----A------------AACTAATGTCG-G-TGTTTT-TT------TCGTTCTA--------------------T---TCAGCAAGTCGATGAAAATCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA
droEug1 scf7180000409672:2710799-2711077 + TACCTT-A-AATCTCTTTCCGTTTTT---GTGCGC-AACCAAAA----------AAGATGGCCGATGTAAATA-TT----------TTTACCAAAATCCAATGAAAAACTTAGCATCCGTGCGGGAATCAACCGAAATGCAATGCCAAACCCAAGGGGCATTGTTATTCCCACGGCTGCTAA-TGTTATTC-TGGAGTTTCCCAGTGT-GACTTGCCGGCAAAATG--A----C------------AACTAATGTCG-G-TGTTTT-TT--------GTTTTA--------------------T---TTAGCAAGTTGATGAGAATCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA
droBia1 scf7180000302292:1153108-1153378 + -------A-AATCTCTTTCCGTTTTT---GTGCGC-AACCAAAA----------AAGATGGCCGATGTAAATA-ATTTTTAAAGTTTTCTC-GAAATCCAGAAAAAAGATTGGCATCCGTCCGCGAAT-GTTCGATGTGCAGTGCAAAATGCAAGGGGCACAGCTACTTTCGCGGCTGCCAA-TGTTATTTTTGGAGTTTCGCGGTGC-GTTTCGCCGGA-------------A------------AATTAAT---T-G-TGTTTT-TC---------TCCTA--------------------T---GCAGCAAGTCGATGAAAACCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA
droTak1 scf7180000415386:313316-313541 - ----------------------------------C-AATCAAAC----------AAGATGGCCGATGTAAGTA-TT----------TTCTCGAAATTCCAT------CCGTGGCATCCACG----------CCGAAATGCAATGTGAAGCGCAGGGGGCCAAGTTATTTGCTCGGCTGCTGA-TGTTATTT-TTG-------GAGTGC-GATTCGGAGGCTAAATA-------A------------AACTAATGACG-G-TGTTTT-TC-----------TTA--------------------TTTCGCAGCAAGTCGATGAAAGTCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTT
droEle1 scf7180000491027:225835-226102 + -------A-AATCTCTTTCCGTTTTT---GTGCGC-AACCAAAA----------AAGATGGCCGATGTAAATA-TT----------TTTTCGAGAATCCATTA-AAATCTTGGCATCGGAGCGAGAATTGGCCGAAATGCAGTGCCCAGCTCAGCCAGCGGTGTTCCGCGAACGATGGCCAA-TGTTATTT-CTTGGATTCCCAGTGC-GGTCCGTCGGCAAAATG--G----A------------AACTAAT-TCG-G-TGTTTT-T-----------TCTA--------------------T---TTAGCAAGTCGACGAGAATCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA
droRho1 scf7180000779469:253470-253741 + -------A-AATCTCTTTCCGTTTTT---GTGCGC-AATCAAAA----------AAGATGGCCGATGTAAATA-TT----------TTTTTAAAAATCCAATAAAAAACTTGGCATCCGTGCGGGAATTTGCCAAAATGCTGTGTCAAACTCAACCGGCGGCATTCCGCAAGCGATGGCCAA-TGTTATTT-TTTGGATTCCCAGTGT-GATACGCCGGCAAAATG--G----A------------AACTAATGTCG-G-TGTTTT-TC---------TTTTA--------------------T---GCAGCAAGTCGATGAGAATCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA
droFic1 scf7180000453851:651121-651401 - CGCTCTCAAAATCTCTTTCCGTTTTT---GTGCGC-AATCAAAA----------AAGATGGCCGATGTAAATA-AT----------TTCTCGAAAATCCAATAAATAACTCGGCATCCGTGCGGGAATTGGCCGAAATGCAATGCCAAATTAAAACGATAGAGTGAACCGCTCGGCTGCCGA-TGTTATTT-TGGACCTTTCCATTGC-AGTTTACCGGCAAAATG--G----A------------AACTAACTGCG-G-TGTTTT-TT--------CTTTCA--------------------T---TCAGCAAGTCGATGAGAATCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA
droKik1 scf7180000302470:844478-844773 - TGATTTTA-ATACTCTTTCCGTTT-T---GTGCACGAACCAAAA----------AAGATGGCCGATGTAAATA-TC----------T-TTCGAAAATCCAATGAAATATTCGGCATCTGTGTGGAAATTGGCCAAAATGCAGTGTGAAATGAATTTGGCAGTGTTTCGCGCACGATGGCAAA-TGTTATTT-TGGACCTCTTCAGTGC-GATTTTCACGCAAAATG--G---CAGCCG-----------TATTGACT-T-TGTTTT-TCTTTTTCTTTGAT-TTTTTG----------C--CAA---ACAGCAAGTCGATGAGAATCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA
droAna3 scaffold_13266:15827069-15827301 - C--------------------------------AC-ATCCAAAAAACCTACATTAAAATGGCCGATGTAATTA-TA----------CTTCC---GATCCCAGATAACATTTGGCATCCGTGCGGGGATTTGCCAAAATGCAATACAAACTGCCT------------AATGCACGCCTTCCAAGTGTTATTT-GTGAGTTC-CTAATGG-GAT-------------AG-A----T------------AACTAATACCG-G-TTATTT-TC------------AA------------------CTT---GCAGCAAGTCGATGAAAATCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA
droBip1 scf7180000396567:315589-315821 - C--------------------------------AC-ATCCAAAAAACTTATATCAAAATGGCCGATGTAATTA-TA----------CTTCC---GATCCCAGATAACATTTGGCATCCGTGCGGGGATTTGCCAAAATTCAATACAAACTGCCT------------AAAGCACGCCTTCCAAGTGTTATTT-GTGAGTT-CCCAATGG-GAT-------------AG-A----T------------AACTAATACCG-GTTGTT----------------TTA----------------AACTT---GCAGCAAGTCGATGAAAACCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA
dp5 3:3685897-3686182 + ------------CTCTTTCCGTTCAC---GT-CAC-TTTCAAC--------GTCAAGATGGCCGATGTAAT-ATTT----------TGCAGAAAAATCCAAATAAATATTAGGCATCCGTGGACGAATTGACTTAAATTGTGTGCTATACGTTCACTGCAATATTCCGCGCACGGGTGCTAA-TATTATTT-TGGCGTTTTTTGGCTT-AGTTTTGCCACAAAACG--G----AACCG--------AACTAACTGTT-G-TGTTTA-TTC---TCTCGTTC-ATTCTA----------C--CAA---ACAGCAAGTCGATGACACTCTTAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA
droPer2 scaffold_2:3872185-3872470 + ------------CTCTTTCCGTTCAC---GT-CAC-TTTCAAC--------GTCAAGATGGCCGATGTAAT-ATTT----------TGCAGAAAAATCCAAATAAATATTAGGCATCCGTGGACGAATTGACTTAAATTGTGTGCTATACGTTCACTGCAATATTCCGCGCACGGGTGCTAA-TATTATTT-TGGCGTTTTTCGGCTT-AGTTTTGCCACAAAACG--G----AACCG--------AACTAACTGTT-G-TGTTTA-TTC---TCTCGTTC-ATTCTA----------C--CAA---ATAGCAAGTCGATGACACTCTTAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA
droWil2 scf2_1100000004513:934326-934389 - T---------------TTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTT--------------------T---TTTGCAGGCTGATGAAACTCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA
droVir3 scaffold_12875:19012298-19012597 - dvi_7850 TGCGGTGTGTGTTTCTTTCCGTTCCG-TAGACTGC-AAACGT-C----------AAGATGGCCGATGTAATT--TT----------TGTGTAAAAATCTAGAAAAATATAAAGCATCCGTGCGCAGTACGG-CAAGAGTTTATAATAATCACAAAGTCCAATGTACTGCGCATGTTTGCAAA-TATTATTT-TAGAGTTTTACGT-GCTAAAGTGTATACGAAATT-GG---CGATAAATTGTGCTAATAAATACCC-ATTGTTTT-TT-----------CTATGACA----------C--AAA---ACAGCAAGTTGATGAAACTCTTAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA
droMoj3 scaffold_6496:12696690-12696997 - TGCTCGGCATGTTTCTTTCCGTTC-CGTAGACTGC-AATCGT-C----------AAGATGGCCGATGTAATT--TT----------TGTGCAAAAATCTAAAAAAATATTAAACATCCGTGTGCAGAATAGCAAAAGT-TTATAATATTTACAATATCTGACTCGCTGCGCATGGTTGACAA-TATTATTT-TAGAGTTTTGA-GTAATACATTGTGCGCAAAATT-GACAGCAAAAAACTGTGCTAATAAATGCCA-ATTGTTTT-TC--------TTTTTATTTTG---------A-CACAA---ACAGCAAGTTGATGAAACTCTTAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA
droGri2 scaffold_15245:5075009-5075273 - ------------------------------------------------------AAGATGGCCGATGTAATT--TT----------TGTGCAAAAATCTAAAAAAATATTGAACATCCGTGTGCAGAACGGCTACAGTAT-ACCATATTTAGCCTATATAATATAATGCACATGCATGCCAA-TGTTATTT-TAGAGTTTTGT---GT-GCTATATCA-C-AAATA--GAAGTGACTATTTTGGCTAATA--TGCATTT-TGTTTT-GT--------TTTTTA---TATATTGGCTGA-CACAA---ACAGCAAGTTGATGAAACTCTTAAGAAGAAGCGTACCTTCAAGAAGTTCACCTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGCCTT-A-AATCTCTTTCCGTTTTT---GTGCGC-AACCAAAA----------AAGATGGCCGATGTAAATA-TC----------TAATACAAAATCCAATGAAAAACTCGGCATCCGTGCGGTAATCAAACAAAATGCCAAACGAAACACAATTAGAAGACTTCGTTGCACGGCTGCTGA-TGTTATTC-TGGAGTTTCGCAGCGC-GATTTACCGGCTAAATG--G----A------------AACTAATGTCG-G-TGTTTT-TT------TCGTTCTA--------------------T---GCAGCAAGTCGATGAAAGTCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.............................................................................................................................................................................................................................................................................................................................GATGAAAGTCTGAAGAAGAAGC......................22117.0017041110000000100000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAGTCTGAAGAAGA.........................25110.001000010025200000000
...............................................................................................................................................................................................................................................................................................................................TGAAAGTCTGAAGAAGAAGCGTACCTTC..............2818.00800000012010031000
..............................................................................................................................................................................................................................................................................................................................ATGAAAGTCTGAAGAAGAAGCGTACCT................2716.00601320000000000000
..............................................................................................................................................................................................................................................................................................................................ATGAAAGTCTGAAGAAGAAGC......................2116.00601410000000000000
............................................................................................................................................................................................................................................................................................................................CGATGAAAGTCTGAAGAAGAAGC......................2316.00601320000000000000
...............................................................................................................................................................................................................................................................................................................................TGAAAGTCTGAAGAAGAAGCGTACCTT...............2715.00500010001012000000
..........................................................................................................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAGAAGAAGC......................2515.00500500000000000000
.............................................................................................................................................................................................................................................................................................................................GATGAAAGTCTGAAGAAGA.........................1914.00400010000000300000
..........................................................................................................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAGAAGAAGCGT....................2714.00400000000210010000
..........................................................................................................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAGA............................1914.00400200011000000000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAGTCTGAAGAAGAAGC......................2814.00401110001000000000
.............................................................................................AAATCCAATGAAAAACTC..........................................................................................................................................................................................................................................................1814.00400400000000000000
...........................................................................................................................................................................................................................................................................................................................TCGATGAAAGTCTGAAGAAGAAGCGTA...................2713.00300000000000012000
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAGTT......2513.00300000030000000000
..........................................................................................................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAGAAGA.........................2213.00303000000000000000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAGTCTGA...............................1913.00301200000000000000
...........................................................................................................................................................................................................................................................................................................................TCGATGAAAGTCTGAAGAAGAAGCG.....................2513.00300000000100020000
....................................................................................................................................................................................................................................................................................................................................GTCTGAAGAAGAAGCGTACCTTCAA............2513.00300000000002100000
........................................................................................................................................................................................................................................................................................................................AAGTCGATGAAAGTCTGAAGAAGA.........................2413.00300300000000000000
.................................................................................................................................................................................................................................................................................................................................AAAGTCTGAAGAAGAAGCGTACCT................2412.00200011000000000000
................TTCCGTTTTT---GTGCGC-AACC.................................................................................................................................................................................................................................................................................................................................2012.00200010000000100000
..................................................................................................................................................................................................................................................................................................................................................CGTACCTTCAAGAAGTTCACCT.2212.00200200000000000000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAGTCTGAAGAAGAA........................2612.00200000001010000000
....................................................................................................................................................................................................................................................................................................................................GTCTGAAGAAGAAGCGTACCTTCAAGA..........2712.00200000000002000000
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTTCACC..2312.00200100000000100000
..........................................................................................................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAGAAGAAGCGTA...................2812.00200000000000011000
........................................................................................................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTT...............1812.00200110000000000000
.........................T---GTGCGC-AACCAAAA----------AAGATGGCCGA........................................................................................................................................................................................................................................................................................................2612.00200000010100000000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAGTCTGAAGA............................2212.00201010000000000000
.................TCCGTTTTT---GTGCGC-AACCAAAA----------AAGA...............................................................................................................................................................................................................................................................................................................2712.00200000001010000000
.............................................................................................................................................................................................................................................................................................................................................AGAAGCGTACCTTCAAGAAGTT......2212.00200000000002000000
............................................................................................................................................................................................................................................................................................................................CGATGAAAGTCTGAAGAAGAAGCGTA...................2612.00200000000000020000
............................................................GCCGATGTAAATA-TC----------TAATACA............................................................................................................................................................................................................................................................................2212.00200000200000000000
.........................................................ATGGCCGATGTAAATA-TC----------...................................................................................................................................................................................................................................................................................1812.00220000000000000000
............................................................................................................................................................................................................................................................................................................................CGATGAAAGTCTGAAGAAG..........................1912.00200200000000000000
...............................................................................................................................................................................................................................................................................................................................TGAAAGTCTGAAGAAGAAGCGTACC.................2512.00200000000011000000
.................................................................................................................................................................................................................................................................................................................................................GCGTACCTTCAAGAAGTTC.....1912.00200020000000000000
.......................................................................................AATACAAAATCCAATGAAAAACTCGGCA......................................................................................................................................................................................................................................................2812.00200200000000000000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAGTCTGAA..............................2012.00201010000000000000
....................................................................................................................................................................................................................................................................................................................................GTCTGAAGAAGAAGCGTACCG................2111.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................TGAAAGTCTGAAGAAGAAGCGTACCT................2611.00100000000010000000
...........................................................................................................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAGA..........2011.00100000001000000000
.............................................................................................................................................................................................................................................................................................................................GATGAAAGTCTGAAGAAGAAGCGTA...................2511.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................GATGAAAGTCTGAAGAA...........................1711.00100000000001000000
........................TT---GTGCGC-AACCAAAA----------AAG................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
......................................................................................................................................................................................................................................................................................................................GCAAGTCGATGAAAGTCTGAA..............................2111.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................TGAAGAAGAAGCGTACCTTCAAGAAGT.......2711.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................TCTGAAGAAGAAGCGTACCTTCAAGAAGT.......2911.00100000001000000000
..................CCGTTTTT---GTGCGC-AACC.................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
...............................GCGC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2111.00100000000000100000
....................GTTTTT---GTGCGC-AACCAAAA----------AA.................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
.......................TTT---GTGCGC-AACCAAAA----------AAGATGGCCGA........................................................................................................................................................................................................................................................................................................2811.00100000010000000000
............CTCTTTCCGTTTTT---GTGCGC-AACCGG...............................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
........................................................................................................................................................................................................................................................................................................................AAGTCGATGAAAGTCTGAAGAAGAAGC......................2711.00101000000000000000
........................TT---GTGCGC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2511.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................GTCTGAAGAAGAAGCGTAC..................1911.00100010000000000000
.........................T---GTGCGC-AACCAAAA----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2311.00100010000000000000
............................................................................................................................................................................................................................................................................................................................CGATGAAAGTCTGAAGAAGAAGCG.....................2411.00100000000001000000
...................CGTTTTT---GTGCGC-AACCAAAA----------AA.................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
...............................GCGC-AACCAAAA----------AAGATGGCCGA........................................................................................................................................................................................................................................................................................................2311.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................GAAGCGTACCTTCAAGAAGTT......2111.00100010000000000000
.........................T---GTGCGC-AACCAAAA----------AAGATGGCCGATC......................................................................................................................................................................................................................................................................................................2811.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAGAAGAAG.......................2411.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................CGTACCTTCAAGAAGTTC.....1811.00100100000000000000
.....................................................................................................................................................................................................................................................................GTTTT-TT------TCGTTCTA--------------------T---GCAG..................................................2011.00100100000000000000
...............................................................................................................................................................................................................................................................................................................T---GCAGCAAGTCGATGAAAGTCTGAAGA............................2711.00100000010000000000
..........................................................TGGCCGATGTAAATA-TC----------TAA................................................................................................................................................................................................................................................................................2011.00100000000010000000
..........................................................................................................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAGAAGAA........................2311.00101000000000000000
........................................................................................................................................................AATTAGAAGACTTCGTTGCACGGC.........................................................................................................................................................................................2411.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................ATGAAAGTCTGAAGAAGA.........................1811.00100100000000000000
..........................................................................................................................................................TTAGAAGACTTCGTTGCACGGCTGC......................................................................................................................................................................................2511.00100000010000000000
................TTCCGTTTTT---GTGCGC-AACCAAAA----------AAGA...............................................................................................................................................................................................................................................................................................................2811.00100000010000000000
.............................................................................................................................................................................................................................................................................................................................GATGAAAGTCTGAAGAAG..........................1811.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................AAGTCTGAAGAAGAAGCGTACCTTCAA............2711.00100000000001000000
......................TTTT---GTGCGC-AACCAAAA----------AAG................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................TCGATGAAAGTCTGAAGAAA..........................2011.00100000000001000000
...............................................................................................................................................................................................................................................................................................................T---GCAGCAAGTCGATGAAAGTCTGAAGAA...........................2811.00100000000100000000
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGA..........2111.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................TCGATGAAAGTCTGAAGAAGAAGC......................2411.00100010000000000000
.......................TTT---GTGCGC-AACCAAAA----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2511.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAG.............................1811.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................TACCTTCAAGAAGTTCACC..1911.00100000100000000000
.......................TTT---GTGCGC-AACCAAAA----------AAGA...............................................................................................................................................................................................................................................................................................................2111.00100000000100000000
........................................................................A-TC----------TAATACAAAATCCAA....................................................................................................................................................................................................................................................................1811.00100000100000000000
.........................................................................................................................................................................................................................................................................................................................AGTCGATGAAAGTCTGAAGAAGAAGCGT....................2811.00100000000100000000
.............TCTTTCCGTTTTT---GTGCGC-AACCAAAA----------A..................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
.............................GTGCGC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2311.00100010000000000000
.........................................................................................................................................................................................................................................................................................................................AGTCGATGAAAGTCTGAAGAAG..........................2211.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................TGAAGAAGAAGCGTACCTTC..............2011.00100010000000000000
...................................................................................................................................................AACACAATTAGAAGACTTCGTTGCACGGC.........................................................................................................................................................................................2911.00100000010000000000
................................................................................................................................................................................................................................................................................................................................GAAAGTCTGAAGAAGAAGCGTACC.................2411.00100010000000000000
.......................TTT---GTGCGC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2611.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................CTGAAGAAGAAGCGTACCTTCAAGAAGT.......2811.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................CTGAAGAAGAAGCGTACCT................1911.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTTCAA............2111.00100001000000000000
.........................................................................................................................................TGCCAAACGAAACACAATTAGAAGAC......................................................................................................................................................................................................2611.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAGTCTGAAG.............................2111.00100100000000000000
.........................T---GTGCGC-AACCAAAA----------AAGA...............................................................................................................................................................................................................................................................................................................1911.00100000010000000000
......................TTTT---GTGCGC-AACCAAAA----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2611.00100010000000000000
......................TTTT---GTGCGC-AACCAAAA----------AAGA...............................................................................................................................................................................................................................................................................................................2211.00100000001000000000
......................................CCAAAA----------AAGATGGCCGAA.......................................................................................................................................................................................................................................................................................................1811.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................GATGAAAGTCTGAAGAAGAAGCGTAC..................2611.00101000000000000000
.............................................................................................AAATCCAATGAAAAACTCG.........................................................................................................................................................................................................................................................1911.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................AAGTCTGAAGAAGAAGCGTACCTTCAAGA..........2911.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................TGAAAGTCTGAAGAA...........................1511.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................ATGAAAGTCTGAAGAAGAAGCGTAC..................2511.00100000000000010000
....................GTTTTT---GTGCGC-AACCAAAA----------AAGATG.............................................................................................................................................................................................................................................................................................................2611.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................ATGAAAGTCTGAAGAAGAAG.......................2011.00100010000000000000
.........................T---GTGCGC-AACCAAAA----------AAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2711.00100010000000000000
........................TT---GTGCGC-AACCAAAA----------AAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2811.00100010000000000000
................................................................................................TCCAATGAAAAACTCGGCATCCGTGCGGT............................................................................................................................................................................................................................................2911.00100000000000010000
.........................................................................................................................................................ATTAGAAGACTTCGTTGCACG...........................................................................................................................................................................................2111.00100000000000001000
...........................................................................................................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAGAAGTTCACC..2811.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................ATGAAAGTCTGAAGAAGAA........................1911.00100010000000000000
droSec2
TGCCTT-A-AATCTCTTTCCGTTTTT---GTGCGC-AACCAAAA----------AAGATGGCCGATGTAAATA-TC----------TAATACAAAATCCAATGAAAAACTCGGCATCCGTGCGGGAATCCAACAAAATGCCAAACGAAACACAATTAGAACACTTCGTTGCACGGCTGCTGG-TGTTATTC-TGGAGTTTCGCTTCGC-GATTTACCGGCTAAATG--G----A------------AACTAATGTCG-G-TGTTTT-TT------TCGTTCTA--------------------T---GCAGCAAGTCGATGAAAGTCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.............................................................................................................................................................................................................................................................................................................................GATGAAAGTCTGAAGAAGAAGC......................22118.001804140
............................................................................................................................................................................................................................................................................................................................CGATGAAAGTCTGAAGAAGAAGC......................23113.001302101
.............................................................................................................................................................................................................................................................................................................................GATGAAAGTCTGAAGAAGA.........................1918.0080080
..............................................................................................................................................................................................................................................................................................................................ATGAAAGTCTGAAGAAGA.........................1817.0070070
................................................................................................................................................................................................................................................................................................................................GAAAGTCTGAAGAAGAAGC......................1916.0060060
..............................................................................................................................................................................................................................................................................................................................ATGAAAGTCTGAAGAAGAAGC......................2116.0060060
....................................................................................................................................................................................................................................................................................................................................GTCTGAAGAAGAAGCGTACCTTCAAGA..........2715.0050050
........................................................................................................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTT...............1814.0040040
........................TT---GTGCGC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2514.0040040
........................................................................................................................................................................................................................................................................................................................AAGTCGATGAAAGTCTGAAGAAGA.........................2414.0040040
.............................................................................................................................................................................................................................................................................................................................GATGAAAGTCTGAAGAAGAA........................2014.0040040
..............................................................................................................................................................................................................................................................................................................................ATGAAAGTCTGAAGAAGAA........................1913.0030030
.............................................................................................................................................................................................................................................................................................................................GATGAAAGTCTGAAGAAG..........................1813.0030030
.......................TTT---GTGCGC-AACCAAAA----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2513.0030120
....................................................................................................................................................................................................................................................................................................................................GTCTGAAGAAGAAGCGTACCTT...............2213.0030120
..................................................................................................................................................................................................................................................................................................................................................CGTACCTTCAAGAAGTTCAC...2012.0020020
....................................................................................................................................................................................................................................................................................................................................GTCTGAAGAAGAAGCGTACCTTCAA............2512.0020020
....................................................................................................................................................................................................................................................................................................................................................TACCTTCAAGAAGTTCACC..1912.0020020
.............................................................................................................................................................................................................................................................................................................................................AGAAGCGTACCTTCAAGA..........1812.0022000
.........................T---GTGCGC-AACCAAAA----------AAGATGGCCG.........................................................................................................................................................................................................................................................................................................2512.0020020
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAGTCTGA...............................1912.0020020
...............................................................................................................................................................................................................................................................................................................................TGAAAGTCTGAAGAAGAAGCGTACC.................2512.0021010
..............CTTTCCGTTTTT---GTGCGC-.....................................................................................................................................................................................................................................................................................................................................1812.0020011
...................................................................................................................................................................................................................................................................................................................................................GTACCTTCAAGAAGTTCAC...1912.0020020
.........................................................................................................................................................................................................................................................................................................................AGTCGATGAAAGTCTGAA..............................1812.0020020
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAGTCTGAAGAAGAA........................2612.0020020
.........................................................................................................................................................................................................................................................................................................................AGTCGATGAAAGTCTGAAGAAGAAGC......................2612.0020020
.........................................................................................................................................................................................................................................................................................................................AGTCGATGAAAGTCTGAAGAAGAA........................2411.0010100
.......................TTT---GTGCGC-AACCAAAA----------AAGATGGCCG.........................................................................................................................................................................................................................................................................................................2711.0010010
.....................................ACCAAAA----------AAGATGGCCGA........................................................................................................................................................................................................................................................................................................1811.0010001
............CTCTTTCCGTTTTT---GTGCGC-AACCAA...............................................................................................................................................................................................................................................................................................................................2611.0010010
....................................................................................................................................................................................................................................................................................................................................GTCTGAAGAAGAAGCGTACCTTCAAG...........2611.0010010
..........................................................................................................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAGAAGA.........................2211.0010010
...............................................................................................................................................................................................................................................................................................................................TGAAAGTCTGAAGAAGAAGCGTACCT................2611.0010100
...................................................................................................................................................................................................................................................................................................................................................GTACCTTCAAGAAGTTCACC..2011.0010010
.............................................................................................................................................................................................................................................................................................................................GATGAAAGTCTGAAGAAGAAG.......................2111.0010010
.....................................ACCAAAA----------AAGATGGCCGATGTA....................................................................................................................................................................................................................................................................................................2211.0010001
.........................T---GTGCGC-AACCAAAA----------AAGA...............................................................................................................................................................................................................................................................................................................1911.0010001
................TTCCGTTTTT---GTGCGC-AA...................................................................................................................................................................................................................................................................................................................................1811.0010010
.......................TTT---GTGCGC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2611.0010010
.............................................................................................................................................................................................................................................................................................................................................AGAAGCGTACCTTCAAGAAGTT......2211.0011000
............................................................................................................................................................................................................................................................................................................................CGATGAAAGTCTGAAGAAGAAGCGT....................2511.0010100
......................TTTT---GTGCGC-AACCAAAA----------AA.................................................................................................................................................................................................................................................................................................................2011.0010010
................TTCCGTTTTT---GTGCGC-AACCAA...............................................................................................................................................................................................................................................................................................................................2211.0010010
.................................................................................................................................................................................................................................................................................................................................................GCGTACCTTCAAGAAGTT......1811.0010010
............................................................................................................................................................................................................................................................................................................................CGATGAAAGTCTGAAGAAGAAG.......................2211.0011000
....................GTTTTT---GTGCGC-AACCAAA..............................................................................................................................................................................................................................................................................................................................1911.0010010
...............................GCGC-AACCAAAA----------AAGATGGCCG.........................................................................................................................................................................................................................................................................................................2211.0010010
.................................................................................................................................................................................................................................................................................................................................AAAGTCTGAAGAAGAAGCGTACCTT...............2511.0010010
..................................................................................................................................................................................................................................................................................................................................AAGTCTGAAGAAGAAGCGTACCTT...............2411.0010010
.........................T---GTGCGC-AACCAAAA----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2311.0010010
.............................GTGCGC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2311.0010010
........................................................................................................................................................................................................................................................................................................................AAGTCGATGAAAGTCTGA...............................1811.0010001
...........................................................................................................................................................................................................................................................................................................................TCGATGAAAGTCTGAAGAAGA.........................2111.0010010
........................TT---GTGCGC-AACCAAAA----------AAGATGGCCG.........................................................................................................................................................................................................................................................................................................2611.0010010
...................................................................................................................................................................................................................................................................................................................................AGTCTGAAGAAGAAGCGTACCTT...............2311.0010100
.......................TTT---GTGCGC-AACCAAAA----------AAG................................................................................................................................................................................................................................................................................................................2011.0010010
..............................................................................................................................................................AACACTTCGTTGCACGGCTGCTGG-T.................................................................................................................................................................................2511.0010010
.................................................................................................................................................................................................................................................................................................................................................GCGTACCTTCAAGAAGTTCA....2011.0010010
......................................................................................................................................................................................................................................................................................................................................CTGAAGAAGAAGCGTACCT................1911.0010010
..............CTTTCCGTTTTT---GTGCGC-AACC.................................................................................................................................................................................................................................................................................................................................2211.0010010
...............................................................................................................................................................................................................................................................................................................................TGAAAGTCTGAAGAAGAA........................1811.0010010
..........................................................................................................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAGA............................1911.0010010
..................................C-AACCAAAA----------AAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2111.0010010
........................TT---GTGCGC-AACCAAAA----------AAG................................................................................................................................................................................................................................................................................................................1911.0010010
.......................TTT---GTGCGC-AACCAAAA----------AAGATG.............................................................................................................................................................................................................................................................................................................2311.0010001
............................................................................................................................................................................................................................................................................................................................CGATGAAAGTCTGAAGAAGA.........................2011.0010010
...............................................................................................................................................................................................................................................................................................................................................AAGCGTACCTTCAAGAAGTTCACC..2411.0010010
.................................................................................................................................................................................................................................................................................................................................................GCGTACCTTCAAGAAGTTC.....1911.0010010
................................................................................................................................................................................................................................................................................................................................GAAAGTCTGAAGAAGAAGCGTACCT................2511.0010100
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTT......1911.0010010
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGT.......1811.0010010
...................................................................................................................................................................................................................................................................................................................................................GTACCTTCAAGAAGTTCA....1811.0010010
.........................T---GTGCGC-AACCAAAA----------AAGATG.............................................................................................................................................................................................................................................................................................................2111.0010010
....................................AACCAAAA----------AAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2011.0010010
........................................................................................................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTTCAAGA..........2311.0010001
..........................................................................................................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAGAAGAA........................2311.0010100
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTTCA....2111.0010010
......................................................................................................................................................................................................................................................................................................................................CTGAAGAAGAAGCGTACCTT...............2011.0010010
.............................................................................................................................................................................................................................................................................................................................GATGAAAGTCTGAAGAAGAAGCGTACCTT...............2911.0010100
..................................C-AACCAAAA----------AAGATGGCCGATC......................................................................................................................................................................................................................................................................................................2211.0010010
......................................CCAAAA----------AAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................1811.0010010
.............TCTTTCCGTTTTT---GTGCGC-A....................................................................................................................................................................................................................................................................................................................................2011.0010010
..........................................................................................................................................................................................................................................................................................................................GTCGATGAAAGTCTGAAGAAGAAGCGT....................2711.0011000
......................TTTT---GTGCGC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2711.0010010
......................TTTT---GTGCGC-AACCAAAA----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2611.0010010
.......................................................................................................................................................................................................................................................................................................................................TGAAGAAGAAGCGTACCTT...............1911.0010010
......................TTTT---GTGCGC-AACCAAAA----------AAGATGGCCG.........................................................................................................................................................................................................................................................................................................2811.0010010
...............TTTCCGTTTTT---GTGCGC-AACC.................................................................................................................................................................................................................................................................................................................................2111.0010010
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTTCAC...2211.0010010
.........................................................................................................................................................................................................................................................................................................................AGTCGATGAAAGTCTGAAGAA...........................2111.0010010
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAGTCTGAA..............................2011.0010010
....................................................................................................................................................................................................................................................................................................................................GTCTGAAGAAGAAGCGTACC.................2011.0010010
...................CGTTTTT---GTGCGC-AACCAAAA----------AA.................................................................................................................................................................................................................................................................................................................2311.0010010
...........................................................................................................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAGAA.........2111.0010010
.........................................................................................................................................................................................................................................................................................................................................AAGAAGAAGCGTACCTTCAAGAAGTTCA....2811.0010010
.............TCTTTCCGTTTTT---GTGCGC-.....................................................................................................................................................................................................................................................................................................................................1911.0010010
....................................................................................................................................................................................................................................................................................................................................GTCTGAAGAAGAAGCGTACCTTCA.............2411.0010100
.....................................ACCAAAA----------AAGATGGCCGATGTAAAT.................................................................................................................................................................................................................................................................................................2511.0010100
dm3
TGCTTT-A-AATCTCTTTCCGTTTTT---GTGCGC-AACCAAAA----------AAGATGGCCGATGTAAATA-TC----------TATACAAAAATCCAATGAAAAACTCGGCATCCGTGCGGGTATCGAACAAAATGCCATACGAAACACCATTAGAAGACTTCGTTGCACGGCTGCTGA-TGTTATTC-TGGAGTTTCGCAGCGC-GATTTACCGGCTGAATGT-G----A------------AACTAATGTCG-G-TGTTTTTTT------TCGTTCTA--------------------T---GCAGCAAGTCGATGAAAATCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM231091

Ovary		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...........................................................................................................................................................................................................................................................................................................................TCGATGAAAATCTGAAGAAGAAGCG.....................251105.00105000000000000000000000000000000000000001000010000000010000000000000000000000000001000000000000000000000000000000000000000000000000000002600000110000000000000000000000000000000000000000000000000000000130101300000000000400090141161040001000000000000000000000000000000000000000000000000000000000000000001000000010000000000000001000200000
...............................................................................................................................................................................................................................................................................................................................TGAAAATCTGAAGAAGAAGCGTACCT................26158.005800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000003210000000000000000000000000000000000000000000000000086391800000000000000110102000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TGAAAATCTGAAGAAGAAGCGTACCTT...............27158.00580000000000000000000000000000000000000001100000001000000000000000000000000000000000200000000000000000000000000000000000000000000000000001000002000000110000000000000000000000000000000000000000000300030000202020270000000220603330000000000100000000000000000000000000000000000000000000000000000010001010000000000000000000002020000000
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAGC......................22155.005500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301000100000000000000000000000001000000000000000000000000000020005014000000100000011000020000000000001200000000000000000000000000000000000000000000000000300000001002210110000000000002011400100000
................................................................................................................................................................................................................................................................................................................................GAAAATCTGAAGAAGAAGCGTACCTT...............26136.00360000000000000000000000000000000000000020000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020110000000000000000000000000000000000000000101400010000001010140000300000101010000000000100000000000000000000000000000000000000000000000000000000000000000200000000000000101210000000
...........................................................................................................................................................................................................................................................................................................................TCGATGAAAATCTGAAGAAGAAGCGTA...................27135.00350000000000000000000000000000000000000000000000000000000001100000000000000000000100000000000000000000000000000000000000000000000000000001000000200000100000000000000000000000000000000000000000000000000000000000000000100030537530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.....................................ACCAAAA----------AAGATGGCCGA........................................................................................................................................................................................................................................................................................................18129.00290000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000050100000000000000000000000000000000000000000000000000000000000010000010000003000000000000000000000000000000000000000000000100000000000000000000100100300101002001100000000000010100000000000200000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGA.........................19122.00220000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000020000000000000000000000000000400000000000000000100001000100000000000000000000000000000000000000000000000000000000000020000000200000000000000000010420000000
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAGCGTA...................25116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000530000000000000000010200300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................19116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000122130000300000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TCTGAAGAAGAAGCGTACCTTCAAGAAGT.......29115.00150000000000000000000000000000000000000000000000000000000000000000000000000000081240000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAGCGT....................24115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000100000000000000000000037001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000
..................................................................................................................................................................................................................................................................................................................................AAATCTGAAGAAGAAGCGTACCTT...............24114.00140000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000106000001000000000000000001000000000000000000000000000000000000000000000000000000000001000000000000000000000000100000000
....................................................................................................................................................................................................................................................................................................................................ATCTGAAGAAGAAGCGTACCTT...............22114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000010000000000000000000200000021000000001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000410000000
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.............................GTGCGC-AACCAAAA----------AAGAT..............................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TT---GTGCGC-AACCAAAA----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................TGAAGAAGAAGCGTACCTTCA.............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................GCGTACCTTCAAGAAGTTCA....2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CGC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TCTTTCCGTTTTT---GTGCGC-.....................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAGCGTAATC................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................ATCCAATGAAAAACTCGG........................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TA--------------------T---GCAGCAAGTCGATGAAAATCTGAA..............................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................ATCTGAAGAAGAAGCGTACCTTCAAG...........2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CGATGAAAATCTGAAGAAGAAGCGTACC.................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GAAAATCTGAAGAAGAAGCGTACC.................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........TCTCTTTCCGTTTTT---GTGCG.......................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000
...............TTTCCGTTTTT---GTGCGC-A....................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CGC-AACCAAAA----------AAGATGG............................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTTCAAGAAGTTC.....2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................ATGAAAATCTGAAGAAGAA........................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AAGCGTACCTTCAAGAAGTT......2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................AAGTCGATGAAAATCTGAA..............................1912.0020000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................ATTC-TGGAGTTTCGCAGCGC-GATT....................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................GTGCGC-AACCAAAA----------AAGATGGCCG.........................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................GCGTACCTTCAAGAAGTT......1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AAGCGTACCTTCAAGAAGTTC.....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................AAGTCGATGAAAATCTGAAGAAGAAGC......................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.........................T---GTGCGC-AACCAAAA----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GAAAATCTGAAGAAGAAGCGTACCTTC..............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................................................................................................................................................................................................................CGTACCTTCAAGAAGTTC.....1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TACCTTCAAGAAGTTCACCTA2112.0020000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GTCGATGAAAATCTGAAGAAGAAGCGTA...................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAGCGTACC.................2712.0020000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................................................................................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAGAAGTT......2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAATCTGAAG.............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................................................................................................................................................................................AAGAAGCGTACCTTCAAG...........1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TCGATGAAAATCTGAAGA............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................C-AACCAAAA----------AAGATGGCCG.........................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AGAAGCGTACCTTCAAGAAGTT......2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTTTT---GTGCGC-AACCAAAA----------AAGA...............................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................ATGAAAATCTGAAGAAGA.........................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................T---GTGCGC-AACCAAAA----------AAGAT..............................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TTC-TGGAGTTTCGCAGCGC-GATTTACC................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
................TTCCGTTTTT---GTGCGC-AACCA................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................AAATCTGAAGAAGAAGCGTACC.................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................GTTTTT---GTGCGC-AACCAAA..............................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GC-AACCAAAA----------AAGATGGCCGA........................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CTCTTTCCGTTTTT---GTGCGC-AACCAA...............................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTT---GTGCGC-AACCAAAA----------AAGA...............................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CGC-AACCAAAA----------AAGATGGCCG.........................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AAGAAGCGTACCTTCAAGAAGT.......2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............CTCTTTCCGTTTTT---GTGCGC-.....................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAG..........................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................AAATCTGAAGAAGAAGCGTACCT................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TGCCTT-A-AATCTCTTTCCGTTTTT---GTGCGC-AACCAAAA----------AAGATGGCCGATGTAAATA-TC----------TGTTC-AAAATCCAATGAAAAACTCGGCATCCGTGCGGGAATCGAACAAAATGCCATGCGAAACACAACTAAAAGACATTGCCGCACGGCTGCTGA-TGTTATTC-CGGAGTTTCCCAGCGA-GATTTTCCGGCTAAATG--G----A------------AACTAATGTCG-G-TGTTTT-TC------TCGTTTTA--------------------T---TCAGCAAGTCGATGAAAATCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAGC......................22117.00171114730
......................TTTT---GTGCGC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2717.0070303010
..................................................................................................................................................................CATTGCCGCACGGCTGCTGA-TG................................................................................................................................................................................2216.0065001000
............................................................................................................................................................................................................................................................................................................................CGATGAAAATCTGAAGAAGAAGC......................2316.0062002020
.......................TTT---GTGCGC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2616.0061202010
........................TT---GTGCGC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2515.0050102020
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAATCTGAAGAAGAAGC......................2815.0051200200
..............................................................................................................................................................................................................................................................................................................................ATGAAAATCTGAAGAAGAAGC......................2114.0041100110
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGA.........................1914.0040001210
.............................GTGCGC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2313.0031101000
.......................................................................................................................................................................................................................................................................................................................................TGAAGAAGAAGCGTACCTT...............1913.0031001100
....................................................................................................................................................................................................................................................................................................................................ATCTGAAGAAGAAGCGTACCTT...............2213.0030002100
..........................................................................................................................................................................................................................................................................................................................GTCGATGAAAATCTGAAGAAGAAGC......................2513.0031010010
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTT......1913.0030102000
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTTCAC...2213.0031200000
............................................................................................................................................................................................................................................................................................................................CGATGAAAATCTGAAGAAGA.........................2012.0020000020
....................................................................................................................................................................TTGCCGCACGGCTGCTGA-TGTT..............................................................................................................................................................................2212.0021000010
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTTC.....2012.0021100000
........................TT---GTGCGC-AACCAAAA----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2412.0020100010
.........................................................................................................................................................................................................................................................................................................................AGTCGATGAAAATCTGAAGAAGAAGCGTAC..................3012.0020000002
.........................................................................................................................................................................................................................................................................................................................AGTCGATGAAAATCTGAAGAAGA.........................2312.0021000100
.......................TTT---GTGCGC-AACCAAAA----------AAGA...............................................................................................................................................................................................................................................................................................................2112.0021000010
..................................................................................................................................................................CATTGCCGCACGGCTGCTGA-TGT...............................................................................................................................................................................2312.0020000020
.............................GTGCGC-AACCAAAA----------AAGAT..............................................................................................................................................................................................................................................................................................................1912.0020100010
................TTCCGTTTTT---GTGCGC-AACC.................................................................................................................................................................................................................................................................................................................................2012.0020101000
....................................................................................................................................................................................................................................................................................................................................ATCTGAAGAAGAAGCGTAC..................1912.0021000010
.......................TTT---GTGCGC-AACCAAAA----------AAGAT..............................................................................................................................................................................................................................................................................................................2212.0021001000
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAGCGTAC..................2612.0020100100
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTTCA....2112.0020002000
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAG.......................2112.0020000200
........................................................................................................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTTCAAGA..........2312.0021000100
....................................................................................................................................................................................................................................................................................................................................ATCTGAAGAAGAAGCGTACCTTC..............2312.0020000200
.......................TTT---GTGCGC-AACCAAAA----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2512.0020200000
...............................GCGC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2111.0010100000
........................................................................................................................................................................................................................................................................................................................AAGTCGATGAAAATCTGAAGAAGAA........................2511.0011000000
...............................................................................................................................................................................................................................................................................................................................TGAAAATCTGAAGAAGAAGCGTACCTT...............2711.0011000000
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAGCGTACC.................2711.0011000000
..................................................................................................................................................................................................................................................................................................................................AAATCTGAAGAAGAAGCGTACCTT...............2411.0010010000
................................................................................................................................................................................................................................................................................................................................GAAAATCTGAAGAAGAAG.......................1811.0010000010
...................................................................................................................................................................................................................................................................................................................................AATCTGAAGAAGAAGCGTACCTTCAAGA..........2811.0010000100
.................................................................................................................................................................................................................................................................................................................................................GCGTACCTTCAAGAAGTTCAC...2111.0011000000
.....................................ACCAAAA----------AAGATGGCCGATG......................................................................................................................................................................................................................................................................................................2011.0010000010
........................TT---GTGCGC-AACCAAAA----------AAG................................................................................................................................................................................................................................................................................................................1911.0010001000
....................................AACCAAAA----------AAGATGGCCGATC......................................................................................................................................................................................................................................................................................................2111.0010001000
............................................................................................................................................................................................................................................................................................................................CGATGAAAATCTGAAGAAGAAGCGTACCT................2911.0010100000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAATCTGAAGAA...........................2311.0010000100
.........................................................................................................................................................................................................................................................................................................................AGTCGATGAAAATCTGAAGA............................2011.0010000100
..............................................................................................................................................................................................................................................................................................................................ATGAAAATCTGAAGAAGAAGCGTAC..................2511.0011000000
............................................................................................................................................................................................................................................................................................................................CGATGAAAATCTGAAGAAGAAGCGTA...................2611.0010000100
.................................GC-AACCAAAA----------AAGATGGCCGA........................................................................................................................................................................................................................................................................................................2111.0010001000
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAGTTCAC...2811.0010000100
...........................................................................................................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAGAAGTTCACC..2811.0010100000
.......................TTT---GTGCGC-AACCAAAA----------AAGATGGCCGA........................................................................................................................................................................................................................................................................................................2811.0010000001
..........................................................................................................................................................................................................................................................................................................................GTCGATGAAAATCTGAAGAAGAAG.......................2411.0011000000
........................................................................................................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTT...............1811.0010000010
................................................................................................................................................................................................................................................................................................................................GAAAATCTGAAGAAGAAGC......................1911.0010000010
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAATCTG................................1811.0010000010
.................................GC-AACCAAAA----------AAGATGGCCGATC......................................................................................................................................................................................................................................................................................................2311.0010100000
.............................GTGCGC-AACCAAAA----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2211.0010100000
....................GTTTTT---GTGCGC-AACCAAAA----------AAGATG.............................................................................................................................................................................................................................................................................................................2611.0011000000
........................................................................................................................................................................................................................................................................................................................AAGTCGATGAAAATCTGAAGAAG..........................2311.0011000000
.....................................................................................................................................................................................................................................................................................................................................TCTGAAGAAGAAGCGTACCTTCA.............2311.0011000000
.........................................................................................................................................................................................................................................................................................................................................AAGAAGAAGCGTACCTTCAAGAA.........2311.0010010000
.............................................................................................................................................................................................................................................................................................................................................AGAAGCGTACCTTCAAGAAGTTCA....2411.0010001000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAATCTGAA..............................2011.0010000010
..............................................................................................................................................................................................................................................................................................................................ATGAAAATCTGAAGAAGAA........................1911.0010000100
......................................................................................................................................................................................................................................................................................................................................CTGAAGAAGAAGCGTACCTTCAAG...........2411.0010000010
...................................................................................................................................................................................................................................................................................................................................................GTACCTTCAAGAAGTTCAC...1911.0010100000
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAGCGTACCT................2811.0010000010
........................................................................................................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTTCAAGAAGTT......2711.0010000100
............................................................................................................................................................................................................................................................................................................................CGATGAAAATCTGAAGAAG..........................1911.0011000000
........................TT---GTGCGC-AACCAAAA----------AAGATGGCCG.........................................................................................................................................................................................................................................................................................................2611.0010001000
........................................................................................................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTTCAAGAA.........2411.0011000000
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAA.........2211.0010000010
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAGCGTACCTT...............2911.0011000000
.............................................................................................................TCGGCATCCGTGCGGGAATCG.......................................................................................................................................................................................................................................2111.0010000100
..............................................................................................................................................................................................................................................................................................................................ATGAAAATCTGAAGAAGAAGCGT....................2311.0010000100
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGT.......1811.0010000100
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAGCGTA...................2511.0010100000
..............................TGCGC-AACCAAAA----------AAGATGGCCGATG......................................................................................................................................................................................................................................................................................................2611.0010000010
...............................................................................................................................................................................................................................................................................................................................................AAGCGTACCTTCAAGAAGTTCAC...2311.0010001000
...............................................................................................................................................................................................................................................................................................................................................AAGCGTACCTTCAAGAAGTTC.....2111.0010001000
..................................................................................................................................................................................................................................................................................................................................................CGTACCTTCAAGAAGTTCAC...2011.0011000000
...................................................................................................................................................................................................................................................................................................................................................GTACCTTCAAGAAGTTCACC..2011.0010100000
......................................................................................................................................................................................................................................................................................................................................CTGAAGAAGAAGCGTACCTTCAAGAAG........2711.0011000000
..................................C-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................1811.0010100000
.........................T---GTGCGC-AACCAAAA----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2311.0010000010
................................................................................................................................................................................................................................................................................................................................GAAAATCTGAAGAAGAAGCGTACCT................2511.0010100000
...............................GCGC-AACCAAAA----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2011.0010100000
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAGTT......2511.0011000000
..............................................................................................................................................................................................................................................................................................................................................GAAGCGTACCTTCAAGAAGTTCAC...2411.0010100000
........................................................................................................................................................................................................................................................................................................................AAGTCGATGAAAATCTGAAGAAGAAGC......................2711.0011000000
...........................................................................................................................................................................................................................................................................................................................TCGATGAAAATCTGAAGAAGAAGC......................2411.0010100000
droYak3
TGCCCT-A-GATCTCTTTCCGTTTTT---GTGCGC-AACCAAAA----------AAGATGGCCGATGTAAATA-TC----------TATCC-AAAATCCAATGAAAAACTCGGCATCCGTGCGGGAATCGAACAAAATGCTATACGAAACACAACTAGAAGACTTTGCCGCACGGCTGCTGA-TGTTATTC-CGGAGTTTTCCAGCGA-GATTTTCCGCATAAATG--G----A------------AACTAATGTCG-G-TGTTTT-TT------TCGTTCTA--------------------T---TCAGCAAGTCGATGAAAATCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAGC......................22117.0017012100130000
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGA.........................19115.0015004000110000
...........................................................................................................................................................................................................................................................................................................................TCGATGAAAATCTGAAGAAGAAGCG.....................25113.0013000000000013
............................................................................................................................................................................................................................................................................................................................CGATGAAAATCTGAAGAAGAAGC......................2319.00902300040000
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAGCGTACCTT...............2918.00800000080000
............................................................................................................................................................................................................................................................................................................................CGATGAAAATCTGAAGAAGA.........................2018.00802100050000
.......................TTT---GTGCGC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2618.00801500020000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAATCTGAAGAAGA.........................2516.00601300020000
.....................................................................................................................................................................................................................................................................................................................................TCTGAAGAAGAAGCGTACCTTCAAGAAGT.......2916.00600000000006
................................................................................................................................................................................................................................................................................................................................GAAAATCTGAAGAAGAAGCGTACCT................2515.00502200010000
........................................................................................................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTTCAAGAAGTT......2715.00500000000005
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTTCAC...2214.00402100010000
...................................................................................................................................................................................................................................................................................................................................................GTACCTTCAAGAAGTTCAC...1914.00404000000000
......................TTTT---GTGCGC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2714.00400400000000
...........................................................................................................................................................................................................................................................................................................................TCGATGAAAATCTGAAGAAGAAGCGTA...................2714.00400000000004
...............................GCGC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2114.00400310000000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAATCTGAAGAAGAAGC......................2814.00410000010002
................................................................................................................................................................................................................................................................................................................................GAAAATCTGAAGAAGAAGC......................1913.00302000010000
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAGCGTACCT................2813.00301200000000
........................................................................................................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTTCAAGA..........2313.00302000010000
............................................................................................................................................................................................................................................................................................................................CGATGAAAATCTGAAGAAGAAGCGTACCT................2913.00300100020000
......................TTTT---GTGCGC-AACCAAAA----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2613.00301200000000
.................................................................................................................................................................................................................................................................................................................................AAAATCTGAAGAAGAAGCGTACCTT...............2513.00300100020000
..........................................................................................................................................................................................................................................................................................................................GTCGATGAAAATCTGAAGAAGAAGCG.....................2613.00300000000003
.....................................................................................................................................................................................................................................................................................................................................TCTGAAGAAGAAGCGTACCTTCAAGAAG........2813.00300000000003
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAG.......................2113.00301000020000
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAA.........2213.00300001020000
........................TT---GTGCGC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2513.00301200000000
..................................................................................................................................................................................................................................................................................................................................AAATCTGAAGAAGAAGCGTACCT................2313.00301100010000
.................................................................................................................................................................................................................................................................................................................................................GCGTACCTTCAAGAAGTTC.....1912.00201100000000
.........................T---GTGCGC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2412.00201100000000
...........................................................................................................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAGAAGTTCACC..2812.00201100000000
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAGCGT....................2412.00200100010000
TGCCCT-A-GATCTCTTTCCGTTTTT---G...........................................................................................................................................................................................................................................................................................................................................2512.00202000000000
...............................................................................................................................................................................................................................................................................................................................TGAAAATCTGAAGAAGAAGCGTACCTT...............2712.00201000010000
....................................................................................................................................................................................................................................................................................................................................ATCTGAAGAAGAAGCGTACC.................2012.00200200000000
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAGTT......2512.00200000020000
.........................................................................................................................................................................................................................................................................................................................AGTCGATGAAAATCTGAAGAA...........................2112.00202000000000
................................................................................................................................................................................................................................................................................................................................GAAAATCTGAAGAAGAAGCGTACCTT...............2612.00202000000000
...............................................................................................................................................................................................................................................................................................................................TGAAAATCTGAAGAAGAAGCGTACCC................2612.00200200000000
...............................................................................................................................................................................................................................................................................................................................................AAGCGTACCTTCAAGAAGTTCAC...2312.00200000020000
..............................................................................................................................................................................................................................................................................................................................ATGAAAATCTGAAGAAGAAGC......................2112.00201000010000
....................................................................................................................................................................................................................................................................................................................................ATCTGAAGAAGAAGCGTACCTT...............2212.00202000000000
...............................................................................................................................................................................................................................................................................................................................TGAAAATCTGAAGAAGAAGCGTACCT................2612.00201100000000
...................................................................................................................................................................................................................................................................................................................................AATCTGAAGAAGAAGCGTACCTT...............2312.00201000010000
..................................................................................................................................................................................................................................................................................................................................................CGTACCTTCAAGAAGTTCAC...2012.00202000000000
............................................................................................................................................................................................................................................................................................................................CGATGAAAATCTGAAGAAGAAGCGTAC..................2711.00101000000000
............................................................................................................................................................................................................................................................................................................................CGATGAAAATCTGAAGAAG..........................1911.00100000010000
.................................GC-AACCAAAA----------AAGATGGCCGATC......................................................................................................................................................................................................................................................................................................2311.00100100000000
....................................................................................................................................................................................................................................................................................................................................ATCTGAAGAAGAAGCGTACCC................2111.00100100000000
....................................AACCAAAA----------AAGATGGCCGATC......................................................................................................................................................................................................................................................................................................2111.00101000000000
.........................................................ATGGCCGATGTAAATA-TC----------...................................................................................................................................................................................................................................................................................1811.00110000000000
.........................T---GTGCGC-AACCAAAA----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2311.00100100000000
.......................TTT---GTGCGC-AACCAAAA----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2511.00100000010000
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAG...........2011.00100000010000
...............................................................................................................................................................................................................................................................................................................................TGAAAATCTGAAGAAGAAGCGTACC.................2511.00101000000000
.....................................................................................................................................................................................................................................................................................................................................TCTGAAGAAGAAGCGTACCTTCAA............2411.00100000010000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAATCTGA...............................1911.00101000000000
..............................TGCGC-AACCAAAA----------AAGAT..............................................................................................................................................................................................................................................................................................................1811.00100010000000
..............................TGCGC-AACCAAAA----------AAGATGGCCGATC......................................................................................................................................................................................................................................................................................................2611.00101000000000
.....................................ACCAAAA----------AAGATGGCCGA........................................................................................................................................................................................................................................................................................................1811.00100000100000
.........................................................................................................................................................................................................................................................................................................................AGTCGATGAAAATCTGAAGAAGA.........................2311.00100100000000
.......................TTT---GTGCGC-AACCAAAA----------AAG................................................................................................................................................................................................................................................................................................................2011.00100000010000
...........................................................................................................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAGA..........2011.00100000010000
........................................................................................................................................................................................................................................................................................................................AAGTCGATGAAAATCTGAAGAAGAAGCGTAC..................3111.00100000000001
.........................................AAA----------AAGATGGCCGATGTA....................................................................................................................................................................................................................................................................................................1811.00100010000000
............................................................................................................................................................................................................................................................................................................................CGATGAAAATCTGAAGAAGAAGCGTA...................2611.00100000010000
..................................................................................................................................................................................................................................................................................................................................AAATCTGAAGAAGAAGCGTACCTT...............2411.00100000010000
.........................T---GTGCGC-AACCAAAA----------AAGATGGCCGA........................................................................................................................................................................................................................................................................................................2611.00101000000000
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAGTTCACCT.3011.00100000010000
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAGCGTA...................2511.00101000000000
........................................................................................................................................................................................................................................................................................................................AAGTCGATGAAAATCTGAAGAAGAAG.......................2611.00101000000000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAATCTGAAGA............................2211.00110000000000
...................................................................................................................................................................................................................................................................................................................................AATCTGAAGAAGAAGCGTACCTTC..............2411.00100100000000
.................................GC-AACCAAAA----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................1911.00101000000000
...............................................................................................................................................................................................................................................................................................................................TGAAAATCTGAAGAAGAAGCGTAC..................2411.00100100000000
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAGCGTACC.................2711.00100100000000
............................................................................................................................................................................................................................................................................................................................CGATGAAAATCTGAAGAAGAAGCGT....................2511.00100000010000
................................................................................................................................................................................................................................................................................................................................GAAAATCTGAAGAAGAAGCGTACCTTC..............2711.00101000000000
......................................................................................................GAAAAACTCGGCATCCGTG................................................................................................................................................................................................................................................1911.00100100000000
...........................................................................................................................................................................................................................................................................................................................TCGATGAAAATCTGAAGAAGAAGC......................2411.00100000010000
........................................................................................................................................................................................................................................................................................................................AAGTCGATGAAAATCTGAA..............................1911.00101000000000
..............................................................................................................................................................................................................................................................................................................................................GAAGCGTACCTTCAAGAAGTTCAC...2411.00100100000000
.......................................................................................................................................................................................................................................................................................................................................TGAAGAAGAAGCGTACCT................1811.00100000100000
.........................................................................................................................................................................................................................GCATAAATG--G----A------------AACTAATGTCG-G-.....................................................................................................2311.00101000000000
.........................................................................................................................................................................................................................................................................................................................AGTCGATGAAAATCTGAAGAAGAAGC......................2611.00100000010000
.............................................................................................................................................................................................................................AAATG--G----A------------AACTAATGTCG-G-T....................................................................................................2011.00100100000000
.................................................................................................................................................................................................................................................................................................................................................GCGTACCTTCAAGAAGTTCAC...2111.00101000000000
.............TCTTTCCGTTTTT---GTGCGC-AACCAAA..............................................................................................................................................................................................................................................................................................................................2611.00101000000000
................................................................................................................................................................................................CGGAGTTTTCCAGCGA-GATTTT..................................................................................................................................................2211.00100100000000
....................................................................................................................................................................................................GTTTTCCAGCGA-GATTTTCCGC..............................................................................................................................................2211.00100100000000
...................................................................................................................................................................................................................................................................................................................................AATCTGAAGAAGAAGCGTACCTTCA.............2511.00100000010000
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTTCACCT.2411.00100100000000
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAG........2311.00100000010000
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAGTTCAC...2811.00100100000000
..............CTTTCCGTTTTT---GTGCGC-.....................................................................................................................................................................................................................................................................................................................................1811.00100100000000
...........................................................................................................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAGAAGTTCAC...2711.00100000010000
.......................................................................................................................................................................................................................................................................................................................................TGAAGAAGAAGCGTACCTT...............1911.00100000010000
............................................................................................................................................................................................................................................................................................................................CGATGAAAATCTGAAGAAGAAGCGTACC.................2811.00110000000000
...................................................................................................................................................................................................................................................................................................................................AATCTGAAGAAGAAGCGTACC.................2111.00100100000000
....................................................................................................................................................ACACAACTAGAAGACTTTGCCGCACGG..........................................................................................................................................................................................2711.00110000000000
...............................................................................................................................................................................................................................................................................................................................TGAAAATCTGAAGAAGAAGC......................2011.00100000010000
................TTCCGTTTTT---GTGCGC-AAC..................................................................................................................................................................................................................................................................................................................................1911.00101000000000
................TTCCGTTTTT---GTGCGC-AACCAAAA----------A..................................................................................................................................................................................................................................................................................................................2511.00100100000000
......................................................................................................................................................................................................................................................................................................................................CTGAAGAAGAAGCGTACCTTCAAGAAGT.......2811.00100000010000
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTT......1911.00101000000000
..............................................................................................................................................................................................................................................................................................................................................GAAGCGTACCTTCAAGAAGTTC.....2211.00100100000000
....................GTTTTT---GTGCGC-AACCAAA..............................................................................................................................................................................................................................................................................................................................1911.00101000000000
.........GATCTCTTTCCGTTTTT---GTGC........................................................................................................................................................................................................................................................................................................................................2111.00100100000000
......................................CCAAAA----------AAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................1811.00101000000000
........................................................................................................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTTCAAG...........2211.00100000010000
......................................................................................................................................................................................................................................................................................................................................CTGAAGAAGAAGCGTACCTTC..............2111.00100100000000
................................................................................................................................................................................................................................................................................................................................GAAAATCTGAAGAAGAAGCGTACC.................2411.00100100000000
....................................................................................................................................................................................................................................................................................................................................ATCTGAAGAAGAAGCGTAC..................1911.00101000000000
........................................................................................................................................................................................................................................................................................................................AAGTCGATGAAAATCTGAAGAAGAAGC......................2711.00100100000000
........................................................................................................................................................................................................................................................................................................................AAGTCGATGAAAATCTGAAGAAGA.........................2411.00100100000000
...........................................................................................................................................................................................................................ATAAATG--G----A------------AACTAATGTCG-G-T....................................................................................................2211.00100000010000
...................................................................................................................................................................................................................................................................................................................................................GTACCTTCAAGAAGTTCA....1811.00101000000000
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAGT.......2411.00100000100000
........................................................................................................AAAACTCGGCATCCGTGC...............................................................................................................................................................................................................................................1811.00100100000000
.......................TTT---GTGCGC-AACCAAAA----------AAGATGGCCGA........................................................................................................................................................................................................................................................................................................2811.00101000000000
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTTC.....2011.00101000000000
.............................................................................................................................................................................................................................................................................................................................................AGAAGCGTACCTTCAAGAAGTT......2211.00101000000000
............................................................................................................CTCGGCATCCGTGCGGGAATCGAACA...................................................................................................................................................................................................................................2611.00100010000000
..................................................................................................................................................................................................................................................................................................................................................CGTACCTTCAAGAAGTTCA....1911.00101000000000
..............................................................................................................................................................................................................................................................................................................................ATGAAAATCTGAAGAAGAAGCGTACCTT...............2811.00100000010000
..................................................................................................................................................................................................................................................................................................................................AAATCTGAAGAAGAAGCGTAC..................2111.00100100000000
............................................................................................................................................................................................................................................................................................................................CGATGAAAATCTGAAGAAGAAG.......................2211.00101000000000
....................................................................................................................................................................................................................................................................................................................................ATCTGAAGAAGAAGCGTACCTTC..............2311.00100100000000
......................................................................................................................................................................................................................................................................................................................................CTGAAGAAGAAGCGTACCTTCAAGAAG........2711.00101000000000
.....................................................................................................................................................CACAACTAGAAGACTTTGCC................................................................................................................................................................................................2011.00110000000000
..................................................................................................................................................................................................................................................................................................................................AAATCTGAAGAAGAAGCGTACC.................2211.00100100000000
............................................................................................................................................................................................................................................................................................................................................AAGAAGCGTACCTTCAAGAAGT.......2211.00100000010000
.......................................CAAAA----------AAGATGGCCGATC......................................................................................................................................................................................................................................................................................................1820.50100100000000
droEug1
TACCTT-A-AATCTCTTTCCGTTTTT---GTGCGC-AACCAAAA----------AAGATGGCCGATGTAAATA-TT----------TTTACCAAAATCCAATGAAAAACTTAGCATCCGTGCGGGAATCAACCGAAATGCAATGCCAAACCCAAGGGGCATTGTTATTCCCACGGCTGCTAA-TGTTATTC-TGGAGTTTCCCAGTGT-GACTTGCCGGCAAAATG--A----C------------AACTAATGTCG-G-TGTTTT-TT--------GTTTTA--------------------T---TTAGCAAGTTGATGAGAATCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTASizeHit CountTotal NormTotal
No Reads
droBia1
-------A-AATCTCTTTCCGTTTTT---GTGCGC-AACCAAAA----------AAGATGGCCGATGTAAATA-ATTTTTAAAGTTTTCTC-GAAATCCAGAAAAAAGATTGGCATCCGTCCGCGAAT-GTTCGATGTGCAGTGCAAAATGCAAGGGGCACAGCTACTTTCGCGGCTGCCAA-TGTTATTTTTGGAGTTTCGCGGTGC-GTTTCGCCGGA-------------A------------AATTAAT---T-G-TGTTTT-TC---------TCCTA--------------------T---GCAGCAAGTCGATGAAAACCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTASizeHit CountTotal NormTotal
No Reads
droTak1
----------------------------------C-AATCAAAC----------AAGATGGCCGATGTAAGTA-TT----------TTCTCGAAATTCCAT------CCGTGGCATCCACG----------CCGAAATGCAATGTGAAGCGCAGGGGGCCAAGTTATTTGCTCGGCTGCTGA-TGTTATTT-TTG-------GAGTGC-GATTCGGAGGCTAAATA-------A------------AACTAATGACG-G-TGTTTT-TC-----------TTA--------------------TTTCGCAGCAAGTCGATGAAAGTCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTTSizeHit CountTotal NormTotal
No Reads
droEle1
-------A-AATCTCTTTCCGTTTTT---GTGCGC-AACCAAAA----------AAGATGGCCGATGTAAATA-TT----------TTTTCGAGAATCCATTA-AAATCTTGGCATCGGAGCGAGAATTGGCCGAAATGCAGTGCCCAGCTCAGCCAGCGGTGTTCCGCGAACGATGGCCAA-TGTTATTT-CTTGGATTCCCAGTGC-GGTCCGTCGGCAAAATG--G----A------------AACTAAT-TCG-G-TGTTTT-T-----------TCTA--------------------T---TTAGCAAGTCGACGAGAATCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTASizeHit CountTotal NormTotal
No Reads
droRho1
-------A-AATCTCTTTCCGTTTTT---GTGCGC-AATCAAAA----------AAGATGGCCGATGTAAATA-TT----------TTTTTAAAAATCCAATAAAAAACTTGGCATCCGTGCGGGAATTTGCCAAAATGCTGTGTCAAACTCAACCGGCGGCATTCCGCAAGCGATGGCCAA-TGTTATTT-TTTGGATTCCCAGTGT-GATACGCCGGCAAAATG--G----A------------AACTAATGTCG-G-TGTTTT-TC---------TTTTA--------------------T---GCAGCAAGTCGATGAGAATCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTASizeHit CountTotal NormTotal
No Reads
droFic1
CGCTCTCAAAATCTCTTTCCGTTTTT---GTGCGC-AATCAAAA----------AAGATGGCCGATGTAAATA-AT----------TTCTCGAAAATCCAATAAATAACTCGGCATCCGTGCGGGAATTGGCCGAAATGCAATGCCAAATTAAAACGATAGAGTGAACCGCTCGGCTGCCGA-TGTTATTT-TGGACCTTTCCATTGC-AGTTTACCGGCAAAATG--G----A------------AACTAACTGCG-G-TGTTTT-TT--------CTTTCA--------------------T---TCAGCAAGTCGATGAGAATCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTASizeHit CountTotal NormTotal
No Reads
droKik1
TGATTTTA-ATACTCTTTCCGTTT-T---GTGCACGAACCAAAA----------AAGATGGCCGATGTAAATA-TC----------T-TTCGAAAATCCAATGAAATATTCGGCATCTGTGTGGAAATTGGCCAAAATGCAGTGTGAAATGAATTTGGCAGTGTTTCGCGCACGATGGCAAA-TGTTATTT-TGGACCTCTTCAGTGC-GATTTTCACGCAAAATG--G---CAGCCG-----------TATTGACT-T-TGTTTT-TCTTTTTCTTTGAT-TTTTTG----------C--CAA---ACAGCAAGTCGATGAGAATCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTASizeHit CountTotal NormTotal
No Reads
droAna3
C--------------------------------AC-ATCCAAAAAACCTACATTAAAATGGCCGATGTAATTA-TA----------CTTCC---GATCCCAGATAACATTTGGCATCCGTGCGGGGATTTGCCAAAATGCAATACAAACTGCCT------------AATGCACGCCTTCCAAGTGTTATTT-GTGAGTTC-CTAATGG-GAT-------------AG-A----T------------AACTAATACCG-G-TTATTT-TC------------AA------------------CTT---GCAGCAAGTCGATGAAAATCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGA.........................1916.006030030
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAATCTGAAGAAGAAGC......................2814.004130000
....................................................................................................................................................................................................................................................................................................................................ATCTGAAGAAGAAGCGTACC.................2014.004030001
................................................................................................................................................................................................................................................................................................................................GAAAATCTGAAGAAGAAGCGTACCT................2513.003020010
..................................................................................................................................................................................................................................................................................................................................AAATCTGAAGAAGAAGCGTACCTT...............2413.003000021
..........................................................................................................................................................................................................................................................................................................................GTCGATGAAAATCTGAAGAAGAAGC......................2513.003010020
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAGC......................2213.003010011
.....................................................................................................................................................................................................................................................................................................................................TCTGAAGAAGAAGCGTACCTTC..............2212.002000002
.................................................................................................................................................................................................................................................................................................................................AAAATCTGAAGAAGAAGCGTACCT................2412.002000020
..................................C-ATCCAAAAAACCTACATTAAAAT..............................................................................................................................................................................................................................................................................................................2412.002020000
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAAGCGTACCT................2812.002010010
...................................................................................................................................................................................................................................................................................................................................AATCTGAAGAAGAAGCGTACCTTCA.............2512.002000002
................................................................................................................................................................................................................................................................................................................................GAAAATCTGAAGAAGAAGCGTACCC................2512.002020000
................................................................................................................................................................................................................................................................................................................................GAAAATCTGAAGAAGAAGCGTACCTT...............2612.002000020
....................................................................................................................................................................................................................................................................................................................................ATCTGAAGAAGAAGCGTACCTT...............2212.002001010
.................................................................................................................................................................................................................................................................................................................................................GCGTACCTTCAAGAAGTTCACCTA2412.002200000
.................................................................................................................................................................................................................................................................................................................................................GCGTACCTTCAAGAAGTTCAC...2111.001010000
.........................................................................................................................................................................................................................................................................................................................AGTCGATGAAAATCTGAAGAAGA.........................2311.001000001
...........................................AAACCTACATTAAAATGGC...........................................................................................................................................................................................................................................................................................................1911.001100000
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAGT.......2411.001010000
........................................................................................................................GCGGGGATTTGCCAAAATGC.............................................................................................................................................................................................................................2011.001000001
.............................................ACCTACATTAAAATGGCCGAT.......................................................................................................................................................................................................................................................................................................2111.001100000
...........................................AAACCTACATTAAAATGGCC..........................................................................................................................................................................................................................................................................................................2011.001010000
...........................................................................................................................................................................................................................................................................................................................TCGATGAAAATCTGAAGAAGA.........................2111.001010000
............................................AACCTACATTAAAATGGC...........................................................................................................................................................................................................................................................................................................1811.001010000
.................................................................................................................................................................................................................................................................................................................................AAAATCTGAAGAAGAAGCGTAC..................2211.001010000
........................................................................................................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTTCAAGAAGTT......2711.001100000
...................................................................................................................................................................................................................................................................................................................................................GTACCTTCAAGAAGTTCAC...1911.001001000
.................................................................................................................................................................................................................................................................................................................................AAAATCTGAAGAAGAAGCGTACCTT...............2511.001000010
.................................................................................................................................................................................................................................................................................................................................................GCGTACCTTCAAGAAGTTC.....1911.001000100
....................................................................................................................................................................................................................................................................................................................................ATCTGAAGAAGAAGCGTACCT................2111.001100000
..................................................................................................................................................................................................................................................................................................................................AAATCTGAAGAAGAAGCGTACCT................2311.001010000
.................................................................................................................................................................................................................................................................................................................................................GCGTACCTTCAAGAAGTT......1811.001001000
........................................................................................TCC---GATCCCAGATAACATTTGGCAT.....................................................................................................................................................................................................................................................2511.001010000
................................................................................................................................................................................................................................................................................................................................GAAAATCTGAAGAAGAAGCGTACC.................2411.001000010
..........................................................................................................................................................................................................................................................................................................................GTCGATGAAAATCTGAAGAAGA.........................2211.001000010
...........................................AAACCTACATTAAAATGGCCGATCA.....................................................................................................................................................................................................................................................................................................2511.001001000
..................................................................................................................................................................................................................................................................................................................................................CGTACCTTCAAGAAGTTCAC...2011.001100000
...................................................................................................................................................................................................................................................................................................................................AATCTGAAGAAGAAGCGTAC..................2011.001010000
........................................................................................................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTTCAAGAAGTTC.....2811.001010000
............................................................................................................................................................................................................................................................................................................................CGATGAAAATCTGAAGAAGAAGC......................2311.001010000
...........................................AAACCTACATTAAAATGGCCGAT.......................................................................................................................................................................................................................................................................................................2311.001010000
.............................................................................................................................................................................................................................................................................................................................................AGAAGCGTACCTTCAAGAAGTTCACC..2611.001000010
.............................................................................................................................................................................................................................................................................................................................GATGAAAATCTGAAGAAGAA........................2011.001000010
.................................................................................................................................................................................................................................................................................................................................................GCGTACCTTCAAGAAGTTCACC..2211.001010000
......................................................................................................................................................................................................................................................................................................................................CTGAAGAAGAAGCGTACCTTCA.............2211.001000001
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAGTTCACC..2911.001010000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGAAAATCTGAAGAAGA.........................2511.001100000
..................................................................................................................................................................................................................................................................................................................................................CGTACCTTCAAGAAGTTCACCT.2211.001001000
...................................................................................................................................................................................................................................................................................................................................AATCTGAAGAAGAAGCGTACCT................2211.001010000
.................................................................................................................................................................................................................................................................................................................................AAAATCTGAAGAAGAAGCGTACC.................2311.001010000
...............................................CTACATTAAAATGGCCGATC......................................................................................................................................................................................................................................................................................................2011.001001000
......................................................................................................................................................................................................................................................................................................................................CTGAAGAAGAAGCGTACCTTC..............2111.001000010
................................................TACATTAAAATGGCCGATCA.....................................................................................................................................................................................................................................................................................................2011.001100000
...................................................................................................................................................................................................................................................................................................................................AATCTGAAGAAGAAGCGTACCC................2211.001010000
.......................................................................................................................................................................................................................................................................................................................................TGAAGAAGAAGCGTACCTT...............1911.001000010
........................................................................................................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTTCAAGAA.........2411.001100000
......................................................................................................................................................................................................................................................................................................................................CTGAAGAAGAAGCGTACCTTCAAGAA.........2611.001000001
..............................................................................................................................................................................................................................................................................................................................................GAAGCGTACCTTCAAGAAGTTCAC...2411.001100000
.........................................................................................................................................................................................................................................................................................................................AGTCGATGAAAATCTGAAGAAGAAGC......................2611.001001000
....................................................................................................................................................................................................................................................................................................................................ATCTGAAGAAGAAGCGTAC..................1911.001010000
............................................................................................................................................................................................................................................................................................................................CGATGAAAATCTGAAGAAGA.........................2011.001001000
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAGTT......2511.001010000
....................................................................................................................................................................................................................................................................................................................................ATCTGAAGAAGAAGCGTACCTTCA.............2411.001000010
.............................................ACCTACATTAAAATGGCCGATC......................................................................................................................................................................................................................................................................................................2211.001100000
.........................................AAAAACCTACATTAAAATGGCC..........................................................................................................................................................................................................................................................................................................2211.001010000
..................................C-ATCCAAAAAACCTACATTAAAATGGCC..........................................................................................................................................................................................................................................................................................................2811.001010000
droBip1
C--------------------------------AC-ATCCAAAAAACTTATATCAAAATGGCCGATGTAATTA-TA----------CTTCC---GATCCCAGATAACATTTGGCATCCGTGCGGGGATTTGCCAAAATTCAATACAAACTGCCT------------AAAGCACGCCTTCCAAGTGTTATTT-GTGAGTT-CCCAATGG-GAT-------------AG-A----T------------AACTAATACCG-GTTGTT----------------TTA----------------AACTT---GCAGCAAGTCGATGAAAACCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTASizeHit CountTotal NormTotal
No Reads
dp5
------------CTCTTTCCGTTCAC---GT-CAC-TTTCAAC--------GTCAAGATGGCCGATGTAAT-ATTT----------TGCAGAAAAATCCAAATAAATATTAGGCATCCGTGGACGAATTGACTTAAATTGTGTGCTATACGTTCACTGCAATATTCCGCGCACGGGTGCTAA-TATTATTT-TGGCGTTTTTTGGCTT-AGTTTTGCCACAAAACG--G----AACCG--------AACTAACTGTT-G-TGTTTA-TTC---TCTCGTTC-ATTCTA----------C--CAA---ACAGCAAGTCGATGACACTCTTAAGAAGAAGCGTACCTTCAAGAAGTTCACCTASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.................TCCGTTCAC---GT-CAC-TTTCAAC--------GTCAAGA...............................................................................................................................................................................................................................................................................................................28119.001901900000000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGACACTCTTAAGAAGAAGC......................28111.00110130001006
.................TCCGTTCAC---GT-CAC-TTTCAAC--------GTCA..................................................................................................................................................................................................................................................................................................................2518.0080800000000
......................TCAC---GT-CAC-TTTCAAC--------GTCAAGATGGCC..........................................................................................................................................................................................................................................................................................................2818.0080620000000
...............................................................................................................................................................................................................................................................................................................................TGACACTCTTAAGAAGAAGCGTACC.................2517.0070410000200
................................CAC-TTTCAAC--------GTCAAGATGGCC..........................................................................................................................................................................................................................................................................................................2217.0070020500000
...........................................................................................................................................................................................................................................................................................................................TCGATGACACTCTTAAGAAGAAGCG.....................2516.0060100000500
............................................................................................................................................................................................................................................................................................................................CGATGACACTCTTAAGAAGAAGC......................2316.0060220100001
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGACACTCTTAAGA............................2216.0060510000000
...............................................................................................................................................................................................................................................................................................................................TGACACTCTTAAGAAGAAGCGTACCT................2616.0060300000300
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGACACTCTTAAGAAGAAG.......................2715.0050120001010
.......................CAC---GT-CAC-TTTCAAC--------GTCAAGATGGCC..........................................................................................................................................................................................................................................................................................................2715.0050230000000
.................TCCGTTCAC---GT-CAC-TTTCAAC--------GTCAA.................................................................................................................................................................................................................................................................................................................2615.0050500000000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGACACTCTTAAGAAGA.........................2515.0050200000300
.................................AC-TTTCAAC--------GTCAAGATGGCC..........................................................................................................................................................................................................................................................................................................2114.0040010300000
........................................................................................................................................................................................................................................................................................................................................TAAGAAGAAGCGTACCTTCAAGAAGT.......2614.0040100000210
............................................................................................................................................................................................................................................................................................................................CGATGACACTCTTAAGAAGAAGCGT....................2513.0030100002000
..........................................................................................................................................................................................................................................................................................................................GTCGATGACACTCTTAAGA............................1913.0030300000000
.............................GT-CAC-TTTCAAC--------GTCAAGATGGCC..........................................................................................................................................................................................................................................................................................................2413.0030030000000
....................................TTTCAAC--------GTCAAGATGGCC..........................................................................................................................................................................................................................................................................................................1913.0030100200000
................................................................................................................................................................................................................................................................................................................................GACACTCTTAAGAAGAAGC......................1913.0030200100000
................................................................................................................................................................................................................................................................................................................................GACACTCTTAAGAAGAAGCGT....................2113.0030300000000
...........................................................................................................................................................................................................................................................................................................................TCGATGACACTCTTAAGAAGAAGCGTAC..................2813.0030000000300
..................................C-TTTCAAC--------GTCAAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2313.0030210000000
.......................................CAAC--------GTCAAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................1913.0030300000000
................................CAC-TTTCAAC--------GTCAAGATGGCCGATC......................................................................................................................................................................................................................................................................................................2612.0020200000000
........................................................................................................................................................................................................................................................................................................................................TAAGAAGAAGCGTACCTTCAAGAAG........2512.0020200000000
........................................................................................................................................................................................................................................................................................................................AAGTCGATGACACTCTTAAGAAGAAGCG.....................2812.0020000000110
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGACACTCTTAAGAAG..........................2412.0020010000001
...........................................................................................................................................................................................................................................................................................................................TCGATGACACTCTTAAGAAGAAGC......................2412.0020100000010
............................................................................................................................................................................................................................................................................................................................................AAGAAGCGTACCTTCAAGAAGTTCACC..2712.0020200000000
.................................AC-TTTCAAC--------GTCAAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2412.0020101000000
..................................C-TTTCAAC--------GTCAAGATGGCCGA........................................................................................................................................................................................................................................................................................................2212.0020200000000
...............................................................................................................................................................................................................................................................................................................................TGACACTCTTAAGAAGAAGCGTAC..................2412.0020000000200
........................................................................................................................................................................................................................................................................................................................AAGTCGATGACACTCTTAAGAAGAAGC......................2712.0020100000010
.............................GT-CAC-TTTCAAC--------GTCAAGATGGC...........................................................................................................................................................................................................................................................................................................2312.0020001100000
.................................AC-TTTCAAC--------GTCAAGATGGC...........................................................................................................................................................................................................................................................................................................2012.0020100100000
................................CAC-TTTCAAC--------GTCAAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2512.0020100100000
...............................................................................................................................................................................................................................................................................................................................TGACACTCTTAAGAAGAAGCGTACCTT...............2712.0020200000000
.................................AC-TTTCAAC--------GTCAAGATGGCCG.........................................................................................................................................................................................................................................................................................................2212.0021100000000
......................TCAC---GT-CAC-TTTCAAC--------GTCAAGATGGC...........................................................................................................................................................................................................................................................................................................2712.0020000000200
...............................................................................................................................................................................................................................................................................................................................TGACACTCTTAAGAAGAAGCGTACAA................2611.0010000000100
........................................................................................................................................................................................................................................................................................................................................TAAGAAGAAGCGTACCTTCAAGAAGTTC.....2811.0010010000000
....................GTTCAC---GT-CAC-TTTCAAC--------......................................................................................................................................................................................................................................................................................................................1811.0010010000000
.................TCCGTTCAC---GT-CAC-TTTCAAC--------GTC...................................................................................................................................................................................................................................................................................................................2411.0010100000000
............................................................................................................................................................................................................................................................................................................................CGATGACACTCTTAAGAAGA.........................2011.0010000100000
................................CAC-TTTCAAC--------GTCAAGATGGC...........................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGACACTCTTAAGAAGAA........................2611.0010100000000
........................................................................................................................................................................................................................................................................................................................AAGTCGATGACACTCTTAAGAAG..........................2311.0010100000000
.......................................CAAC--------GTCAAGATGGCCGATG......................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................CACTCTTAAGAAGAAGCGTACCTT...............2411.0010010000000
........................................................................................................................................................................................................................................................................................................................AAGTCGATGACACTCTTAAGA............................2111.0010100000000
.............................GT-CAC-TTTCAAC--------GTCAAGATGG............................................................................................................................................................................................................................................................................................................2211.0010000100000
........................................................................................................................................................................................................................................................................................................................AAGTCGATGACACTCTTAAGAAGAAG.......................2611.0010000000010
......................................................................................................................................................................................................................................................................................................................................CTTAAGAAGAAGCGTACCTTC..............2111.0010010000000
...................................................................................................................................................................................................................................................................................................................................................GTACCTTCAAGAAGTTCACC..2011.0010010000000
................................CAC-TTTCAAC--------GTCAAGATGGCCGA........................................................................................................................................................................................................................................................................................................2411.0010000100000
.....................................................................................................................................................................................................................................................................................................................................TCTTAAGAAGAAGCGTACCTTCAAAG..........2611.0010000000100
.......................................................................................................................................................................................................................................................................................................................................TTAAGAAGAAGCGTACCTTCAAGAAG........2611.0010000000010
..................................C-TTTCAAC--------GTCAAGATGGCC..........................................................................................................................................................................................................................................................................................................2011.0010000100000
.........................C---GT-CAC-TTTCAAC--------GTCAAGATG.............................................................................................................................................................................................................................................................................................................2211.0010100000000
.........................................................................................................................................................................................................................................................................................................................AGTCGATGACACTCTTAAGAAGA.........................2311.0010100000000
..........................................................................................................................................................................................................................................................................................................................GTCGATGACACTCTTAAGAAG..........................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................CTCTTAAGAAGAAGCGTACCTT...............2211.0010100000000
................TTCCGTTCAC---GT-CAC-TTTCAAC--------GTCAA.................................................................................................................................................................................................................................................................................................................2711.0010100000000
.................................................................................................................................................................................................................................................................................................................................ACACTCTTAAGAAGAAGCGTACCTTC..............2611.0010100000000
..................................C-TTTCAAC--------GTCAAGATGGCCGATCA.....................................................................................................................................................................................................................................................................................................2511.0010000100000
.........................................................................................................................................................................................................................................................................................................................AGTCGATGACACTCTTAAGA............................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................GATGACACTCTTAAGAAGAAGC......................2211.0010000100000
..............................T-CAC-TTTCAAC--------GTCAAGATGGCCGATC......................................................................................................................................................................................................................................................................................................2711.0010100000000
........................................................................................................................................................................................................................................................................................................................AAGTCGATGACACTCTTAAG.............................2011.0010100000000
.................................................................................................................................................................................................................................................................................................................................................GCGTACCTTCAAGAAGTTCAC...2111.0010100000000
......................................TCAAC--------GTCAAGATGGCCGA........................................................................................................................................................................................................................................................................................................1911.0010100000000
.............................GT-CAC-TTTCAAC--------GTCAAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2711.0010100000000
...........................................................................................................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAGAAGTTCACC..2811.0010100000000
............................................................................................................................................................................................................................................................................................................................CGATGACACTCTTAAGAAG..........................1911.0010100000000
.....................................TTCAAC--------GTCAAGATGGCC..........................................................................................................................................................................................................................................................................................................1811.0010100000000
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAG...........2011.0010000010000
.........................C---GT-CAC-TTTCAAC--------GTCAAGATGGCCGATC......................................................................................................................................................................................................................................................................................................2911.0010001000000
................................................................................................TCCAAATAAATATTAGGCATCCG..................................................................................................................................................................................................................................................2311.0010010000000
.....................TTCAC---GT-CAC-TTTCAAC--------GTCAAGATGGCC..........................................................................................................................................................................................................................................................................................................2911.0010100000000
..............................................................................................................................................................................................................................................................................................................................................GAAGCGTACCTTCAAGAAGTTCA....2311.0010100000000
............................................................................................................................................................................................................................................................................................................................CGATGACACTCTTAAGAAGAAGCGTACCC................2911.0010010000000
......................................................................................................................................................................................................................................................................................................................................CTTAAGAAGAAGCGTACCT................1911.0010100000000
.........................................................................................................ATATTAGGCATCCGTGGACGAAT.........................................................................................................................................................................................................................................2311.0010100000000
.................TCCGTTCAC---GT-CAC-TTTCAAC--------GT....................................................................................................................................................................................................................................................................................................................2311.0010100000000
........................................................................................................................................................................................................................................................................................................................................TAAGAAGAAGCGTACCTTCA.............2011.0010000000100
................................................................................................................................................................................................................................................................................................................................GACACTCTTAAGAAGAAGCG.....................2011.0010010000000
..............................T-CAC-TTTCAAC--------GTCAAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2611.0010100000000
.....................................TTCAAC--------GTCAAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................CAAC--------GTCAAGATGGCCGATC......................................................................................................................................................................................................................................................................................................2011.0010100000000
..........................................................TGGCCGATGTAAT-ATTT----------TG.................................................................................................................................................................................................................................................................................1911.0010001000000
........................................................................................................................................................................................................................................................................................................................................TAAGAAGAAGCGTACCTTCAAG...........2211.0010000010000
....................................................................................................................................................................................................................................................................TGTTTA-TTC---TCTCGTTC-ATTCTA----------C--CAA---A.....................................................2811.0010000000010
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGACACTCTTAAGAA...........................2311.0010100000000
......................................TCAAC--------GTCAAGATGGCCGATC......................................................................................................................................................................................................................................................................................................2111.0010010000000
.........................................................................................................ATATTAGGCATCCGTGGACGAATTGA......................................................................................................................................................................................................................................2611.0010100000000
.............................GT-CAC-TTTCAAC--------GTCAAGATGGCCG.........................................................................................................................................................................................................................................................................................................2511.0010010000000
..................................C-TTTCAAC--------GTCAAGATGGC...........................................................................................................................................................................................................................................................................................................1911.0010100000000
................TTCCGTTCAC---GT-CAC-TTTCAAC--------G.....................................................................................................................................................................................................................................................................................................................2311.0010100000000
.......................................CAAC--------GTCAAGATGGCCGA........................................................................................................................................................................................................................................................................................................1811.0010000100000
................TTCCGTTCAC---GT-CAC-TTTCAAC--------......................................................................................................................................................................................................................................................................................................................2211.0010010000000
....................GTTCAC---GT-CAC-TTTCAAC--------GTCA..................................................................................................................................................................................................................................................................................................................2211.0010100000000
....................GTTCAC---GT-CAC-TTTCAAC--------GTCAAGATGGC...........................................................................................................................................................................................................................................................................................................2911.0010010000000
................................................................................................................................................................................................................................................................................................................................GACACTCTTAAGAAGAAG.......................1811.0010000100000
.............................................................................................................................................................................................................................................................................................................................................AGAAGCGTACCTTCAAGAA.........1911.0010100000000
................................CAC-TTTCAAC--------GTCAAGATGGCCG.........................................................................................................................................................................................................................................................................................................2311.0010100000000
......................................TCAAC--------GTCAAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................................TTCAAC--------GTCAAGATGGCCGATGTAAT-.................................................................................................................................................................................................................................................................................................2611.0010010000000
...................CGTTCAC---GT-CAC-TTTCAAC--------GT....................................................................................................................................................................................................................................................................................................................2111.0010000001000
.............................................................................................................TAGGCATCCGTGGACGAATTGAC.....................................................................................................................................................................................................................................2311.0010100000000
........................................AAC--------GTCAAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................1811.0010010000000
.........................................AC--------GTCAAGATGGCCGATC......................................................................................................................................................................................................................................................................................................1820.5010010000000
droPer2
------------CTCTTTCCGTTCAC---GT-CAC-TTTCAAC--------GTCAAGATGGCCGATGTAAT-ATTT----------TGCAGAAAAATCCAAATAAATATTAGGCATCCGTGGACGAATTGACTTAAATTGTGTGCTATACGTTCACTGCAATATTCCGCGCACGGGTGCTAA-TATTATTT-TGGCGTTTTTCGGCTT-AGTTTTGCCACAAAACG--G----AACCG--------AACTAACTGTT-G-TGTTTA-TTC---TCTCGTTC-ATTCTA----------C--CAA---ATAGCAAGTCGATGACACTCTTAAGAAGAAGCGTACCTTCAAGAAGTTCACCTASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
....................GTTCAC---GT-CAC-TTTCAAC--------......................................................................................................................................................................................................................................................................................................................18117.00171700000
................................CAC-TTTCAAC--------GTCAAGATGGC...........................................................................................................................................................................................................................................................................................................21115.00151302000
..................................C-TTTCAAC--------GTCAAGATGGCC..........................................................................................................................................................................................................................................................................................................20114.00141400000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGACACTCTTAAGA............................22112.00121200000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGACACTCTTAAGAAGAAGC......................28111.00111010000
.....................................TTCAAC--------GTCAAGATGGCC..........................................................................................................................................................................................................................................................................................................18110.0010901000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGACACTCTTAAG.............................2119.009900000
.................TCCGTTCAC---GT-CAC-TTTCAAC--------GTCAAGA...............................................................................................................................................................................................................................................................................................................2818.008080000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGACACTCTTAAGAAGAA........................2618.008800000
................................CAC-TTTCAAC--------GTCAAGATGGCCG.........................................................................................................................................................................................................................................................................................................2318.008800000
................................CAC-TTTCAAC--------GTCAAGATGGCC..........................................................................................................................................................................................................................................................................................................2217.007203002
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGACACTCTTAAGAA...........................2316.006600000
.....................................TTCAAC--------GTCAAGATGGCCG.........................................................................................................................................................................................................................................................................................................1916.006600000
................................CAC-TTTCAAC--------GTCAAGAT..............................................................................................................................................................................................................................................................................................................1816.006600000
................................CAC-TTTCAAC--------GTCAAGATG.............................................................................................................................................................................................................................................................................................................1916.006600000
.................................AC-TTTCAAC--------GTCAAGATGGC...........................................................................................................................................................................................................................................................................................................2016.006303000
.............................GT-CAC-TTTCAAC--------GTCAAGAT..............................................................................................................................................................................................................................................................................................................2015.005500000
..................................C-TTTCAAC--------GTCAAGATGGC...........................................................................................................................................................................................................................................................................................................1915.005500000
..........................................................................................................................................................................................................................................................................................................................GTCGATGACACTCTTAAGA............................1915.005500000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGACACTCTTAAGG............................2214.004400000
.................................AC-TTTCAAC--------GTCAAGATGGCC..........................................................................................................................................................................................................................................................................................................2114.004202000
......................................TCAAC--------GTCAAGATGGCCG.........................................................................................................................................................................................................................................................................................................1813.003300000
................TTCCGTTCAC---GT-CAC-TTTC.................................................................................................................................................................................................................................................................................................................................1913.003300000
..........................................................................................................................................................................................................................................................................................................................GTCGATGACACTCTTAAG.............................1813.003300000
........................................................................................................................................................................................................................................................................................................................................TAAGAAGAAGCGTACCTTCAAGAAGT.......2613.003030000
.........................C---GT-CAC-TTTCAAC--------GTCAAGAT..............................................................................................................................................................................................................................................................................................................2113.003300000
..............................................................................................................................................................................................................................................................................................................................ATGACACTCTTAAGAAGAA........................1913.003300000
............................................................................................................................................................................................................................................................................................................................CGATGACACTCTTAAGAAGAAGC......................2313.003300000
.......................................CAAC--------GTCAAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................1912.002101000
..................CCGTTCAC---GT-CAC-TTTCAAC--------......................................................................................................................................................................................................................................................................................................................2012.002200000
........................................................................................................................................................................................ATTATTT-TGGCGTTTTTCGGCTT-A.......................................................................................................................................................2412.002200000
....................................TTTCAAC--------GTCAAGATGGCC..........................................................................................................................................................................................................................................................................................................1912.002101000
......................TCAC---GT-CAC-TTTCAAC--------GTCAAGATGGC...........................................................................................................................................................................................................................................................................................................2712.002020000
......................................................................................................................................................................................................TTTTCGGCTT-AGTTTTGC................................................................................................................................................1812.002200000
....................................TTTCAAC--------GTCAAGATGGCCGATG......................................................................................................................................................................................................................................................................................................2312.002200000
....................................TTTCAAC--------GTCAAGATGGCCG.........................................................................................................................................................................................................................................................................................................2012.002200000
............................................................................................................................................................................................................................................................................................................................CGATGACACTCTTAAGAA...........................1812.002200000
...............TTTCCGTTCAC---GT-CAC-TTTCAAC--------......................................................................................................................................................................................................................................................................................................................2312.002200000
....................................TTTCAAC--------GTCAAGATGGC...........................................................................................................................................................................................................................................................................................................1812.002200000
...................CGTTCAC---GT-CAC-TTTCAAC--------......................................................................................................................................................................................................................................................................................................................1912.002200000
.............................GT-CAC-TTTCAAC--------GTCAAGATG.............................................................................................................................................................................................................................................................................................................2112.002200000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGACACTCTTAAGAAG..........................2411.001100000
...............................................................................................................................................................................................................................................................................................................................................AAGCGTACCTTCAAGAAGTTCACC..2411.001010000
....................GTTCAC---GT-CAC-TTTCAAC--------GTCAAGAA..............................................................................................................................................................................................................................................................................................................2611.001010000
............................................................................................................................................................................................................................................................................................................................CGATGACACTCTTAAGAAGAAGCGTACCT................2911.001100000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGACACTCTTAAGAAGAAG.......................2711.001100000
...................CGTTCAC---GT-CAC-TTTCAAC--------GTC...................................................................................................................................................................................................................................................................................................................2211.001100000
...............................................................................................................................................................................................................................................................................................................................TGACACTCTTAAGAAGAAGCGTACCT................2611.001010000
...........................................................................................................................................................................................................................................................................................................................TCGATGACACTCTTAAGAAGAAG.......................2311.001001000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGACACTCTTAAGAAGAAGCG.....................2911.001100000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGACACTCTTAAGAC...........................2311.001100000
.......................................CAAC--------GTCAAGATGGCCGATC......................................................................................................................................................................................................................................................................................................2011.001001000
......................................................................................................................................................................................................................................................................................................................................CTTAAGAAGAAGCGTACCTT...............2011.001001000
..................................C-TTTCAAC--------GTCAAGATGGCCGATCA.....................................................................................................................................................................................................................................................................................................2511.001010000
.........................C---GT-CAC-TTTCAAC--------GTCAAGATGGCC..........................................................................................................................................................................................................................................................................................................2511.001010000
..........................................................................................................................................................................................................................................................................................................................GTCGATGACACTCTTAAGAAGAA........................2311.001100000
.......................................................................................................................................................................................................................................................................................................................................TTAAGAAGAAGCGTACCTTC..............2011.001010000
................TTCCGTTCAC---GT-CAC-TTTCAAC--------......................................................................................................................................................................................................................................................................................................................2211.001100000
.......................CAC---GT-CAC-TTTCAAC--------GTCAAGATGGCCG.........................................................................................................................................................................................................................................................................................................2811.001100000
......................TCAC---GT-CAC-TTTCAAC--------GT....................................................................................................................................................................................................................................................................................................................1811.001010000
............................................................................................................................................................................................................................................................................................................................CGATGACACTCTTAAGAAGAAGCGT....................2511.001100000
............................................................................................................................................................................................................................................................................................................................CGATGACACTCTTAAGAAGA.........................2011.001001000
...................................................................................................AAATAAATATTAGGCATCCGTGG...............................................................................................................................................................................................................................................2311.001000001
........................................AAC--------GTCAAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................1811.001010000
.............................GT-CAC-TTTCAAC--------GTCAAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2711.001010000
.......................................................................................................................................................................................................................................................................................................................CAAGTCGATGACACTCTTAAGAAGA.........................2511.001010000
................TTCCGTTCAC---GT-CAC-TTTCAAC--------GTC...................................................................................................................................................................................................................................................................................................................2511.001100000
..............................................................................................................................................................................................................................AACG--G----AACCG--------AACTAACTGT.........................................................................................................2011.001100000
..............................T-CAC-TTTCAAC--------GTCAAGATGGCC..........................................................................................................................................................................................................................................................................................................2311.001001000
......................TCAC---GT-CAC-TTTCAAC--------GTCAAGATGG............................................................................................................................................................................................................................................................................................................2611.001000001
.............................................................................................................................................................................................................................................................................................................................................AGAAGCGTACCTTCAAGA..........1811.001010000
....................................TTTCAAC--------GTCAAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2211.001000010
....................................TTTCAAC--------GTCAAGATGGCCGATCA.....................................................................................................................................................................................................................................................................................................2411.001010000
........................................................................................................................................................................................................................................................................................................................................TAAGAAGAAGCGTACCTTCAAGAAG........2511.001010000
.................TCCGTTCAC---GT-CAC-TTTCAAC--------GTCAA.................................................................................................................................................................................................................................................................................................................2611.001010000
..............................................................................................................................................................................................................................................................................................................................ATGACACTCTTAAGAAGAAGCGTAC..................2511.001010000
..................................C-TTTCAAC--------GTCAAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2311.001010000
....................................TTTCAAC--------GTCAAGATGGCCGATC......................................................................................................................................................................................................................................................................................................2311.001010000
droWil2
T---------------TTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTT--------------------T---TTTGCAGGCTGATGAAACTCTGAAGAAGAAGCGTACCTTCAAGAAGTTCACCTASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.............................................................................................................................................................................................................................................................................................................................GATGAAACTCTGAAGAAGAAGC......................22122.00220010120
.........................................................................................................................................................................................................................................................................................................................GGCTGATGAAACTCTGAAGAAGAAGC......................26110.001001180
........................................................................................................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTT...............1817.00700070
.............................................................................................................................................................................................................................................................................................................................GATGAAACTCTGAAGAAG..........................1816.00620040
.................................................................................................................................................................................................................................................................................................................................AAACTCTGAAGAAGAAGCGTACCTT...............2516.00601500
.............................................................................................................................................................................................................................................................................................................................GATGAAACTCTGAAGAAGAAGCGTACCT................2815.00530200
.............................................................................................................................................................................................................................................................................................................................GATGAAACTCTGAAGAAGAAGCGT....................2415.00530110
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAGT.......2414.00400310
...................................................................................................................................................................................................................................................................................................................................ACTCTGAAGAAGAAGCGTACCTT...............2314.00401030
.........................................................................................................................................................................................................................................................................................................................GGCTGATGAAACTCTGAAGAA...........................2113.00300120
................................................................................................................................................................................................................................................................................................................................GAAACTCTGAAGAAGAAGCGTACCT................2513.00310110
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTTCACCT.2413.00302010
.........................................................................................................................................................................................................................................................................................................................GGCTGATGAAACTCTGAAGAAGA.........................2313.00301020
............................................................................................................................................................................................................................................................................................................................TGATGAAACTCTGAAGAAGAAGCGTACCT................2912.00220000
.........................................................................................................................................................................................................................................................................................................................GGCTGATGAAACTCTGAAGAAGAA........................2412.00200020
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAGTT......2512.00200020
....................................................................................................................................................................................................................................................................................................................................CTCTGAAGAAGAAGCGTACCT................2112.00220000
...............................................................................................................................................................................................................................................................................................................................TGAAACTCTGAAGAAGAAGCGTACCTT...............2712.00201010
............................................................................................................................................................................................................................................................................................................................TGATGAAACTCTGAAGAA...........................1812.00210010
................................................................................................................................................................................................................................................................................................................................GAAACTCTGAAGAAGAAGCGTACCTTC..............2712.00201100
......................................................................................................................................................................................................................................................................................................................................CTGAAGAAGAAGCGTACCTT...............2012.00200020
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAGTTCACC..2912.00200200
................................................................................................................................................................................................................................................................................................................................GAAACTCTGAAGAAGAAGCGTACCTT...............2612.00200110
.......................................................................................................................................................................................................................................................................................................................................TGAAGAAGAAGCGTACCTT...............1912.00200011
................................................................................................................................................................................................................................................................................................................................GAAACTCTGAAGAAGAAGC......................1912.00200011
...........................................................................................................................................................................................................................................................................................................................CTGATGAAACTCTGAAGAAGA.........................2112.00201010
.............................................................................................................................................................................................................................................................................................................................GATGAAACTCTGAAGAAGAAG.......................2112.00200020
.........................................................................................................................................................................................................................................................................................................................GGCTGATGAAACTCTGAAGAAGAAG.......................2512.00201100
..................................................................................................................................................................................................................................................................................................................................AACTCTGAAGAAGAAGCGTACCTT...............2412.00201100
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTTCAC...2212.00200110
...............................................................................................................................................................................................................................................................................................................................TGAAACTCTGAAGAAGAAGCGTACCT................2612.00202000
............................................................................................................................................................................................................................................................................................................................TGATGAAACTCTGAAGAAGAAGC......................2312.00200101
...........................................................................................................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAG...........1912.00200110
..............................................................................................................................................................................................................................................................................................................................ATGAAACTCTGAAGAAGAAGC......................2112.00200110
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAGTTC.....2611.00100100
....................................................................................................................................................................................................................................................................................................................................CTCTGAAGAAGAAGCGTACCTT...............2211.00101000
........................................................................................................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTTCAAGAAGTT......2711.00100100
.............................................................................................................................................................................................................................................................................................................................GATGAAACTCTGAAGAAGA.........................1911.00100100
...........................................................................................................................................................................................................................................................................................................................CTGATGAAACTCTGAAGAAGAA........................2211.00110000
...............................................................................................................................................................................................................................................................................................................................TGAAACTCTGAAGAAGAAGC......................2011.00100010
...........................................................................................................................................................................................................................................................................................................................CTGATGAAACTCTGAAGAAGAAGC......................2411.00100010
........................................................................................................................................................................................................................................................................................................................................GAAGAAGAAGCGTACCTTCA.............2011.00100100
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAGTTCA....2711.00100100
.......................................................................................................................................................................................................................................................................................................................................TGAAGAAGAAGCGTACCTTCAAGAA.........2511.00100010
...............................................................................................................................................................................................................................................................................................................................................AAGCGTACCTTCAAGAAG........1811.00100010
............................................................................................................................................................................................................................................................................................................................TGATGAAACTCTGAAGAAGAA........................2111.00100010
..........................................................................................................................................................................................................................................................................................................................GCTGATGAAACTCTGAAGAAGAAGC......................2511.00100010
.........................................................................................................................................................................................................................................................................................................................GGCTGATGAAACTCTGAAGAAG..........................2211.00100010
..........................................................................................................................................................................................................................................................................................................................GCTGATGAAACTCTGAAGA............................1911.00100010
................................................................................................................................................................................................................................................................................................................................GAAACTCTGAAGAAGAAGCGTACC.................2411.00110000
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAG........2311.00100010
...............................................................................................................................................................................................................................................................................................................................................AAGCGTACCTTCAAGAAGTTCACC..2411.00100010
...........................................................................................................................................................................................................................................................................................................................CTGATGAAACTCTGAAGAAG..........................2011.00110000
.............................................................................................................................................................................................................................................................................................................................GATGAAACTCTGAAGAAGAA........................2011.00100010
...............................................................................................................................................................................................................................................................................................................................................AAGCGTACCTTCAAGAAGTT......2011.00100100
.....................................................................................................................................................................................................................................................................................................................................TCTGAAGAAGAAGCGTACCTT...............2111.00100100
..............................................................................................................................................................................................................................................................................................................................ATGAAACTCTGAAGAAGAAGCGTACC.................2611.00110000
..........................................................................................................................................................................................................................................................................................................................GCTGATGAAACTCTGAAGAAGA.........................2211.00101000
.............................................................................................................................................................................................................................................................................................................................................AGAAGCGTACCTTCAAGAAGTTCACC..2611.00100100
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGT.......1811.00100010
.............................................................................................................................................................................................................................................................................................................................GATGAAACTCTGAAGAAGAAGCGTACC.................2711.00110000
..........................................................................................................................................................................................................................................................................................................................GCTGATGAAACTCTGAAGAAG..........................2111.00100010
..........................................................................................................................................................................................................................................................................................................................GCTGATGAAACTCTGAAGAAGAAGCGT....................2711.00100100
.......................................................................................................................................................................................................................................................................................................................................TGAAGAAGAAGCGTACCTTC..............2011.00110000
..................................................................................................................................................................................................................................................................................................................................AACTCTGAAGAAGAAGCGTACCT................2311.00100010
............................................................................................................................................................................................................................................................................................................................TGATGAAACTCTGAAGAAGG.........................2011.00110000
.............................................................................................................................................................................................................................................................................................................................GATGAAACTCTGAAGAAGAAGCGTACCTT...............2911.00100100
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTTC.....2011.00100010
...........................................................................................................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAGAA.........2111.00100010
....................................................................................................................................................................................................................................................................................................................................CTCTGAAGAAGAAGCGTACCTTCAAGA..........2711.00100010
droVir3
TGCGGTGTGTGTTTCTTTCCGTTCCG-TAGACTGC-AAACGT-C----------AAGATGGCCGATGTAATT--TT----------TGTGTAAAAATCTAGAAAAATATAAAGCATCCGTGCGCAGTACGG-CAAGAGTTTATAATAATCACAAAGTCCAATGTACTGCGCATGTTTGCAAA-TATTATTT-TAGAGTTTTACGT-GCTAAAGTGTATACGAAATT-GG---CGATAAATTGTGCTAATAAATACCC-ATTGTTTT-TT-----------CTATGACA----------C--AAA---ACAGCAAGTTGATGAAACTCTTAAGAAGAAGCGTACCTTCAAGAAGTTCACCTASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells
................................TGC-AAACGT-C----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................19118.0018003010000000000101000005200100000000000000000000000001000002010
...............................CTGC-AAACGT-C----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................20114.0014020200000001000000100000000000000001010000000000000001000014000
....................GTTCCG-TAGACTGC-AAAC.................................................................................................................................................................................................................................................................................................................................1817.007200100000000000000000000000000000000000000000000000000000000004
......................................................................................................................................................................................................................................................................................................................................CTTAAGAAGAAGCGTACCTT...............2016.006000000000001010100000000000000000000010000000000000000000000020
............................AGACTGC-AAACGT-C----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2315.005001400000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GATGAAACTCTTAAGAAGAAGC......................2215.005001000000000010001000000000000000000000000000000000000000001010
.........................G-TAGACTGC-AAACGT-C----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2515.005100300000000000000010000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CTTAAGAAGAAGCGTACCT................1915.005002100000000000000010000000000000000000000000000000000000001000
.................................GC-AAACGT-C----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................1814.004000000000000000010000000101000000000000000000000000001000000000
........................................................................................................................................................................................................................................................................................................................................TAAGAAGAAGCGTACCTT...............1814.004000000000011010000001000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTTC.....2014.004000100000000000000000000000000000200000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................TAAGAAGAAGCGTACCTTCAAGAAGT.......2614.004000000000000000000000000000020000000002000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GAAACTCTTAAGAAGAAGCGTACCTT...............2614.004001000000000000000010000000001000000000000000000000000000000010
................................TGC-AAACGT-C----------AAGATGGCCGATCA.....................................................................................................................................................................................................................................................................................................2414.004001000000000000000000100000000000001001000000000000000000000000
.............................GACTGC-AAACGT-C----------AAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2513.003001000000000000000010000000000000001000000000000000000000000000
............................AGACTGC-AAACGT-C----------AAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2613.003001000000000000000000100000000000000000000000000000000000001000
...............TTTCCGTTCCG-TAGACTGC-AAACG................................................................................................................................................................................................................................................................................................................................2413.003000000000000000000000000000000000000000000000000000000000000003
...............TTTCCGTTCCG-TAGACTGC-AAAC.................................................................................................................................................................................................................................................................................................................................2313.003000000000000000000000000000000000000000000000000000000000000003
...............................CTGC-AAACGT-C----------AAGATGGC...........................................................................................................................................................................................................................................................................................................1913.003010100000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................................................................................................................................TGAAACTCTTAAGAAGAAGCGTACCTT...............2713.003001000100000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TGATGAAACTCTTAAGAAGAAGC......................2313.003002000000000000000000000000000000000000000000000000000000000010
...................CGTTCCG-TAGACTGC-AAAC.................................................................................................................................................................................................................................................................................................................................1913.003000000000000000000000000000000000000000000000000000000000000003
.......................................................................................................................................................................................................................................................................................................................................TTAAGAAGAAGCGTACCTT...............1913.003000000000010010000000000000000000000010000000000000000000000000
.................................GC-AAACGT-C----------AAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2113.003000000000000000000000000000000000100000000000000000000000000002
...........................TAGACTGC-AAACGT-C----------AAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2712.002000100000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................ACTCTTAAGAAGAAGCGTACCTT...............2312.002001000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGT.......1812.002001000000000000100000000000000000000000000000000000000000000000
..............................ACTGC-AAACGT-C----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2012.002010000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TAAGAAGAAGCGTACCTTCAAGAAGTT......2712.002000000000000000000000000000000010000000000000000000000000000010
.....................................AACGT-C----------AAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................1812.002000000000000000000000010000000000000010000000000000000000000000
...........................TAGACTGC-AAACGT-C----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2412.002002000000000000000000000000000000000000000000000000000000000000
..............CTTTCCGTTCCG-TAGACTGC-A....................................................................................................................................................................................................................................................................................................................................2112.002000010000000000000000000000000000000000000000000000000000000001
....................................AAACGT-C----------AAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................1912.002000001000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTT......1912.002000000000000000000000010000000001000000000000000000000000000000
......................TCCG-TAGACTGC-AAACGT-..............................................................................................................................................................................................................................................................................................................................1812.002000000000000000000100000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CTCTTAAGAAGAAGCGTACCTT...............2212.002002000000000000000000000000000000000000000000000000000000000000
...............................CTGC-AAACGT-C----------AAGATGGCCGATG......................................................................................................................................................................................................................................................................................................2412.002000000000000000000100000000000000000000000000000000000000001000
................TTCCGTTCCG-TAGACTGC-A....................................................................................................................................................................................................................................................................................................................................1912.002000000000000000000000100100000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TGATGAAACTCTTAAGAAGA.........................2012.002000000000000000000000000000000001100000000000000000000000000000
..............CTTTCCGTTCCG-TAGACTGC-AAACGT-..............................................................................................................................................................................................................................................................................................................................2612.002000000000000000000000000000000000000000000000000000000000000002
.............................GACTGC-AAACGT-C----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2212.002000100000000000100000000000000000000000000000000000000000000000
....................GTTCCG-TAGACTGC-AAACGT-..............................................................................................................................................................................................................................................................................................................................2012.002100100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AGAAGCGTACCTTCAAGAAGTTCAC...2512.002000100000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAGAAGTTCAC...2712.002000000000000000000000000000000000000000000000000000000000000020
..........................................................................................................................................................................................................................................................................................................................GTTGATGAAACTCTTAAGAAGAAGC......................2512.002000000000000020000000000000000000000000000000000000000000000000
.....................................AACGT-C----------AAGATGGCCGATG......................................................................................................................................................................................................................................................................................................1912.002000000000000000000000010000000000000000100000000000000000000000
................................................................................................................................................................................................................................................................................................................................GAAACTCTTAAGAAGAAGCGTACCT................2512.002000100000000000100000000000000000000000000000000000000000000000
....................................AAACGT-C----------AAGATGGCCGATC......................................................................................................................................................................................................................................................................................................2012.002000100000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AGAAGCGTACCTTCAAGAA.........1912.002000000000000000001000000000000001000000000000000000000000000000
..............CTTTCCGTTCCG-TAGACTGC-AAACGT-C----------AA.................................................................................................................................................................................................................................................................................................................2912.002000000000000000000000000000000000000000000000000000000000000002
.......................CCG-TAGACTGC-AAACGT-C----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2712.002000100000000010000000000000000000000000000000000000000000000000
...............TTTCCGTTCCG-TAGACTGC-AAA..................................................................................................................................................................................................................................................................................................................................2212.002010000000000000000000000000000000000000000000000000000000000001
.......................................................................................................................................................................................................................................................................................................................CAAGTTGATGAAACTCTTAAGAAGAAGC......................2812.002000100000000000001000000000000000000000000000000000000000000000
............................AGACTGC-AAACGT-C----------AAGATGGCCG.........................................................................................................................................................................................................................................................................................................2412.002001000000000000001000000000000000000000000000000000000000000000
.......................CCG-TAGACTGC-AAACGT-C----------AAGAT..............................................................................................................................................................................................................................................................................................................2312.002000000000000000001000000000000000000100000000000000000000000000
..............CTTTCCGTTCCG-TAGACTGC-AAA..................................................................................................................................................................................................................................................................................................................................2312.002100100000000000000000000000000000000000000000000000000000000000
..............CTTTCCGTTCCG-TAGACTGC-AAACGT-C----------...................................................................................................................................................................................................................................................................................................................2712.002000000000000000000000000000000000000000000000000000000000020000
....................GTTCCG-TAGACTGC-AAACG................................................................................................................................................................................................................................................................................................................................1912.002010000000000000000000000000000000000000000000000000000000000001
........GTGTTTCTTTCCGTTCCG-TAGACTGC-A....................................................................................................................................................................................................................................................................................................................................2711.001100000000000000000000000000000000000000000000000000000000000000
........................CG-TAGACTGC-AAACGT-C----------AAGATGG............................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
................TTCCGTTCCG-TAGACTGC-AA...................................................................................................................................................................................................................................................................................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
............TTCTTTCCGTTCCG-TAGACTGC-AAAC.................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................CAAGTTGATGAAACTCTTAAGAA...........................2311.001000000000000000000000000001000000000000000000000000000000000000
..............................ACTGC-AAACGT-C----------AAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
TGCGGTGTGTGTTTCTTTCC.....................................................................................................................................................................................................................................................................................................................................................2011.001000000010000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................GAAGCGTACCTTCAAGAAGTTCACCT.2611.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................ACTCTTAAGAAGAAGCGTACCTTCAA............2611.001000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CTTAAGAAGAAGCGTACC.................1811.001100000000000000000000000000000000000000000000000000000000000000
.............TCTTTCCGTTCCG-TAGACTG.......................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000001000000000000000000000000000000000000
.......................CCG-TAGACTGC-AAACGT-C----------A..................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AAGCGTACCTTCAAGAAGTT......2011.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................AAGTTGATGAAACTCTTAAGAAGAAGC......................2711.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AAGCGTACCTTCAAGAAGTTCAC...2311.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAGAAGT.......2311.001000000000000100000000000000000000000000000000000000000000000000
......................TCCG-TAGACTGC-AAACGT-C----------AAGA...............................................................................................................................................................................................................................................................................................................2311.001010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................CAAGTTGATGAAACTCTTAAGA............................2211.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TACCTTCAAGAAGTTCACCT.2011.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................GAAGCGTACCTTCAAGAAGTTCA....2311.001001000000000000000000000000000000000000000000000000000000000000
......................TCCG-TAGACTGC-AAACGT-C----------...................................................................................................................................................................................................................................................................................................................1911.001100000000000000000000000000000000000000000000000000000000000000
.............................GACTGC-AAACGT-C----------AAGATGGCCGA........................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
................................TGC-AAACGT-C----------AAGATGGC...........................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
..............................ACTGC-AAACGT-C----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
...............................CTGC-AAACGT-C----------AAGATGGCCGATC......................................................................................................................................................................................................................................................................................................2411.001000000100000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTTCAC...2211.001000000000000010000000000000000000000000000000000000000000000000
................TTCCGTTCCG-TAGACTGC-AAACGT-C----------AA.................................................................................................................................................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CTTAAGAAGAAGCGTACCTTCAAGAA.........2611.001000000000000000000000100000000000000000000000000000000000000000
.............................GACTGC-AAACGT-C----------AAGATGGCCG.........................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
....................GTTCCG-TAGACTGC-AAACGT-C----------AAGATGG............................................................................................................................................................................................................................................................................................................2811.001010000000000000000000000000000000000000000000000000000000000000
................................TGC-AAACGT-C----------AAGATGGCCGA........................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
....................GTTCCG-TAGACTGC-AAACGT-C----------...................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.................................GC-AAACGT-C----------AAGATGGCCGATG......................................................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TGAAACTCTTAAGAAGAAGC......................2011.001000000000000000000000000000000000001000000000000000000000000000
...........................................................................................................ATAAAGCATCCGTGCGCAGTA.........................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CTCTTAAGAAGAAGCGTACC.................2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AAGAAGAAGCGTACCTTCAAGAAG........2411.001000000000000000000000000000100000000000000000000000000000000000
.........................G-TAGACTGC-AAACGT-C----------AAGATGGCCG.........................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...................CGTTCCG-TAGACTGC-AAACG................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TTAAGAAGAAGCGTACCT................1811.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CGTACCTTCAAGAAGTTCACC..2111.001000000000000000100000000000000000000000000000000000000000000000
.............................GACTGC-AAACGT-C----------AAGATG.............................................................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
............................AGACTGC-AAACGT-C----------AAGATG.............................................................................................................................................................................................................................................................................................................2011.001000000000000000010000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GATGAAACTCTTAAGAAGAAGCGTACCT................2811.001000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................AAGAAGAAGCGTACCTTCAAGAAGT.......2511.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GAAACTCTTAAGAAGAAGCGT....................2111.001000000000000000000100000000000000000000000000000000000000000000
........................CG-TAGACTGC-AAACGT-C----------AAG................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AAGAAGCGTACCTTCAAGA..........1911.001000000000000001000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................GAAGCGTACCTTCAAGAAGTTCACC..2511.001000000000000000000000000000000000001000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CGTACCTTCAAGAAGTTCAC...2011.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................GATGAAACTCTTAAGAAGAAGCGTACC.................2711.001001000000000000000000000000000000000000000000000000000000000000
..............CTTTCCGTTCCG-TAGACTG.......................................................................................................................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
...............................................................................................ATCTAGAAAAATATAAAGCATCCGTGC...............................................................................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
.....................................AACGT-C----------AAGATGGCCGATC......................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................................................GTTGATGAAACTCTTAAGAAGA.........................2211.001000001000000000000000000000000000000000000000000000000000000000
...............TTTCCGTTCCG-TAGACTGC-AAACGT-..............................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000001
........................................................................................................................................................................................................................................................................................................................................TAAGAAGAAGCGTACCTTCAA............2111.001000000000000000000000000000001000000000000000000000000000000000
..................................C-AAACGT-C----------AAGATGGCCGATCA.....................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.........................G-TAGACTGC-AAACGT-C----------AAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAG...........1911.001000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AGAAGCGTACCTTCAAGAAGTT......2211.001001000000000000000000000000000000000000000000000000000000000000
.......................................CGT-C----------AAGATGGCCGATGTAATT--TT----------T..................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................TGAAACTCTTAAGAAGAAGCGTACC.................2511.001001000000000000000000000000000000000000000000000000000000000000
..........GTTTCTTTCCGTTCCG-TAGACTGC-A....................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000001000
..............CTTTCCGTTCCG-TAGA..........................................................................................................................................................................................................................................................................................................................................1611.001000000000000000000000000000000000000000000000100000000000000000
......................................................................................................................................................................................................................................................................................................................................CTTAAGAAGAAGCGTACCTTCAAGAAGT.......2811.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................AACTCTTAAGAAGAAGCGTACCTT...............2411.001000100000000000000000000000000000000000000000000000000000000000
.............................GACTGC-AAACGT-C----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GATGAAACTCTTAAGAAGA.........................1911.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................AAACTCTTAAGAAGAAGCGTACCT................2411.001000000000000000000000000000000000000100000000000000000000000000
..........GTTTCTTTCCGTTCCG-TAGACTGC-AAAC.................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
.................TCCGTTCCG-TAGACTGC-AAAC.................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AAGAAGAAGCGTACCTTCA.............1911.001000000000000000001000000000000000000000000000000000000000000000
.........................G-TAGACTGC-AAACGT-C----------AAGAT..............................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................TGC-AAACGT-C----------AAGATGGCCGATC......................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000100000000000000000000000000
...............TTTCCGTTCCG-TAGACTGC-AAACGT-C----------A..................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................GCGTACCTTCAAGAAGTTCACCT.2311.001000000000000000000000000000000000000000000000000000001000000000
.......................................................................................................................................................................................................................................................................................................................................TTAAGAAGAAGCGTACCTTC..............2011.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TTGATGAAACTCTTAAGAAGA.........................2111.001000000000000010000000000000000000000000000000000000000000000000
.................TCCGTTCCG-TAGACTGC-AAACGT-C----------...................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
......................TCCG-TAGACTGC-AAACGT-C----------AAG................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
......................TCCG-TAGACTGC-AAACGT-C----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................GAAGCGTACCTTCAAGAAGTTC.....2211.001000100000000000000000000000000000000000000000000000000000000000
..................CCGTTCCG-TAGACTGC-AAACGT-C----------...................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
..............CTTTCCGTTCCG-TAGACTGC-AAAC.................................................................................................................................................................................................................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
........................CG-TAGACTGC-AAACGT-C----------AAGAT..............................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
.................................GC-AAACGT-C----------AAGATGGCCGA........................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CTCTTAAGAAGAAGCGTACCT................2111.001000000000000000000000000000000000000000000000000000000000000001
...GGTGTGTGTTTCTTTCCGTTCC................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000001
...........................................................................................................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAGAAGTTCACC..2811.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GAAACTCTTAAGAAGAAGC......................1911.001001000000000000000000000000000000000000000000000000000000000000
.....................................AACGT-C----------AAGATGGCCGATCA.....................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CTTAAGAAGAAGCGTACCTTCA.............2211.001000000000000000000000000000000001000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................AAACTCTTAAGAAGAAGCGTACCTT...............2511.001001000000000000000000000000000000000000000000000000000000000000
............................AGACTGC-AAACGT-C----------AAGAT..............................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
............................AGACTGC-AAACGT-C----------AAGATGGCCGA........................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GAAACTCTTAAGAAGAAGCGTACC.................2411.001000100000000000000000000000000000000000000000000000000000000000
............TTCTTTCCGTTCCG-TAGACTGC-AAACGT-..............................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GAAACTCTTAAGAAGAAGCGTAC..................2311.001000000000000000000000000001000000000000000000000000000000000000
........................CG-TAGACTGC-AAACGT-C----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2511.001000000000000000000000010000000000000000000000000000000000000000
...............................CTGC-AAACGT-C----------AAGATGGCCGATCA.....................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AAGAAGAAGCGTACCTTCAAGAAGTTCAC...2911.001000100000000000000000000000000000000000000000000000000000000000
.......................................CGT-C----------AAGATGGCCGATCAG....................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000100000000000000000000000000000000000000
droMoj3
TGCTCGGCATGTTTCTTTCCGTTC-CGTAGACTGC-AATCGT-C----------AAGATGGCCGATGTAATT--TT----------TGTGCAAAAATCTAAAAAAATATTAAACATCCGTGTGCAGAATAGCAAAAGT-TTATAATATTTACAATATCTGACTCGCTGCGCATGGTTGACAA-TATTATTT-TAGAGTTTTGA-GTAATACATTGTGCGCAAAATT-GACAGCAAAAAACTGTGCTAATAAATGCCA-ATTGTTTT-TC--------TTTTTATTTTG---------A-CACAA---ACAGCAAGTTGATGAAACTCTTAAGAAGAAGCGTACCTTCAAGAAGTTCACCTASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...............................CTGC-AATCGT-C----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2015.005400001
..............................ACTGC-AATCGT-C----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2113.003200010
.............................GACTGC-AATCGT-C----------AAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2513.003000003
.......................................................................................................................................................................................................................................................................................................................CAAGTTGATGAAACTCTTAAGAAGAAGC......................2812.002100001
.............................GACTGC-AATCGT-C----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2212.002100001
.......................................................................................................................................................................................................................................................................................................................CAAGTTGATGAAACTCTTAAGAAGA.........................2512.002100001
..............................................................................................................................................................................................................................................................................................................................ATGAAACTCTTAAGAAGAAGCGTACCTT...............2812.002000002
...............................CTGC-AATCGT-C----------AAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2312.002200000
..........................GTAGACTGC-AATCGT-C----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2412.002200000
...............................................................................................................................................................................................................................................................................................................................................AAGCGTACCTTCAAGAAGTT......2011.001000001
..........................................................................................................................................................................................................................................................................................................................GTTGATGAAACTCTTAAGAAGAAGC......................2511.001000001
.....................................................................................................................................................................................................................................................................................................................................TCTTAAGAAGAAGCGTACCTT...............2111.001100000
...........................TAGACTGC-AATCGT-C----------AAGATGGCCGA........................................................................................................................................................................................................................................................................................................2611.001000001
....................GTTC-CGTAGACTGC-AATCGT-C----------AAGATGG............................................................................................................................................................................................................................................................................................................2811.001000001
.................TCCGTTC-CGTAGACTGC-AATC.................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................................................................................................................................................................................................................................................................................................................GATGAAACTCTTAAGAAGAAGCGTA...................2511.001000001
..............CTTTCCGTTC-CGTAGACTGC-AAT..................................................................................................................................................................................................................................................................................................................................2311.001001000
........................................................................................................................................................................................................................................................................................................................................TAAGAAGAAGCGTACCTTCA.............2011.001000100
.................................................................................................................................................................................................................................................................................................................................................GCGTACCTTCAAGAAGTTCACC..2211.001100000
............TTCTTTCCGTTC-CGTAGACTGC-AATCGT-..............................................................................................................................................................................................................................................................................................................................2811.001000001
..........................GTAGACTGC-AATCGT-C----------AAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2811.001100000
....................GTTC-CGTAGACTGC-AATCGT-C----------...................................................................................................................................................................................................................................................................................................................2111.001000001
..................................................................................................................ATCCGTGTGCAGAATAGC.....................................................................................................................................................................................................................................1811.001010000
.............TCTTTCCGTTC-CGTAGACTGC-AATCG................................................................................................................................................................................................................................................................................................................................2611.001100000
..............................................................................................................................................................................................................................................................................................................................................GAAGCGTACCTTCAAGAAGTTCAC...2411.001100000
.............................GACTGC-AATCGT-C----------AAGATG.............................................................................................................................................................................................................................................................................................................1911.001000001
...............................CTGC-AATCGT-C----------AAGATGGC...........................................................................................................................................................................................................................................................................................................1911.001100000
.............................................................................................................................................................................................................................................................................................................................................AGAAGCGTACCTTCAAGAAGTTCACCT.2711.001000010
......................................................................................................................................................................................................................................................................................................................................CTTAAGAAGAAGCGTACCTTCAAGAAGT.......2811.001100000
...................CGTTC-CGTAGACTGC-AATC.................................................................................................................................................................................................................................................................................................................................1911.001100000
............................................................................................................................................................................................................................................................................................................................TGATGAAACTCTTAAGAAGA.........................2011.001000001
.......................................................................................................................................................................................................................................................................................................................CAAGTTGATGAAACTCTTAAGA............................2211.001100000
.....................................ATCGT-C----------AAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................1811.001100000
........................................................................................................................................................................................................................................................................................................................AAGTTGATGAAACTCTTAAGAAGA.........................2411.001000001
...........................................................................................................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAGAAGT.......2311.001000001
...............................................................................................................................................................................................................................................................................................................................................AAGCGTACCTTCAAGAAGTTCA....2211.001100000
.....................................................................................................................................................................................................................................................................................................................................TCTTAAGAAGAAGCGTACC.................1911.001100000
................TTCCGTTC-CGTAGACTGC-AATCGT-C----------A..................................................................................................................................................................................................................................................................................................................2611.001000001
....................GTTC-CGTAGACTGC-AATCGT-..............................................................................................................................................................................................................................................................................................................................2011.001000001
..................CCGTTC-CGTAGACTGC-AA...................................................................................................................................................................................................................................................................................................................................1811.001100000
...............................................................................................................................................................................................................................................................................................................................TGAAACTCTTAAGAAGAAGCGTACCTT...............2711.001000001
............................AGACTGC-AATCGT-C----------AAGAT..............................................................................................................................................................................................................................................................................................................1911.001100000
............................................................................................................................................................................................................................................................................................................................................AAGAAGCGTACCTTCAAGAAGTTC.....2411.001100000
....................GTTC-CGTAGACTGC-AATC.................................................................................................................................................................................................................................................................................................................................1811.001100000
.............................GACTGC-AATCGT-C----------AAGATGGCCGATG......................................................................................................................................................................................................................................................................................................2611.001000100
..........................GTAGACTGC-AATCGT-C----------AAGATGGCC..........................................................................................................................................................................................................................................................................................................2511.001100000
.....................................ATCGT-C----------AAGATGGCCGATGTAATT--...............................................................................................................................................................................................................................................................................................2411.001000001
..................CCGTTC-CGTAGACTGC-AAT..................................................................................................................................................................................................................................................................................................................................1911.001100000
.....................................ATCGT-C----------AAGATGGCCGATG......................................................................................................................................................................................................................................................................................................1911.001000001
......................................................................................................................................................................................................................................................................................................................................CTTAAGAAGAAGCGTACCTT...............2011.001100000
............................AGACTGC-AATCGT-C----------AAGATGGCCGAT.......................................................................................................................................................................................................................................................................................................2611.001000010
...................................................................................................................................................................................................................................................................................................................................ACTCTTAAGAAGAAGCGTACCTT...............2311.001100000
.............................................................................................................................................................................................................................................................................................................................................AGAAGCGTACCTTCAAGAAGTTC.....2311.001000001
.............................GACTGC-AATCGT-C----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2111.001100000
........................................................................................................AATATTAAACATCCGTGTGC.............................................................................................................................................................................................................................................2011.001100000
..................CCGTTC-CGTAGACTGC-AATC.................................................................................................................................................................................................................................................................................................................................2011.001100000
........................................GT-C----------AAGATGGCCGATGTAATT--...............................................................................................................................................................................................................................................................................................2111.001100000
..............CTTTCCGTTC-CGTAGACTGC-.....................................................................................................................................................................................................................................................................................................................................2011.001000010
....................................................................................................................................................................................................................................................................................................................................CTCTTAAGAAGAAGCGTACCTT...............2211.001100000
......................TC-CGTAGACTGC-AATCGT-C----------AAGATGGC...........................................................................................................................................................................................................................................................................................................2711.001000001
...........................................................................................................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAGAAGTTCACC..2811.001000001
......................................................................................................................................................ACAATATCTGACTCGCTGCGCATG...........................................................................................................................................................................................2411.001100000
droGri2
------------------------------------------------------AAGATGGCCGATGTAATT--TT----------TGTGCAAAAATCTAAAAAAATATTGAACATCCGTGTGCAGAACGGCTACAGTAT-ACCATATTTAGCCTATATAATATAATGCACATGCATGCCAA-TGTTATTT-TAGAGTTTTGT---GT-GCTATATCA-C-AAATA--GAAGTGACTATTTTGGCTAATA--TGCATTT-TGTTTT-GT--------TTTTTA---TATATTGGCTGA-CACAA---ACAGCAAGTTGATGAAACTCTTAAGAAGAAGCGTACCTTCAAGAAGTTCACCTASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.................................................................................................................................................................................................................................................................................................................................AAACTCTTAAGAAGAAGCGTACC.................2313.00330
..............................................................................................................................................................................................................................................................................................................................................GAAGCGTACCTTCAAGAAGTTCACCT.2611.00110
.................................................................................................................................................................................................................................................................................................................................AAACTCTTAAGAAGAAGCGTACCTTC..............2611.00110
........................................................................................................................................................................................................................................................................................................................................TAAGAAGAAGCGTACCTT...............1811.00110
...................................................................................................................................................................................................................................................................................................................................................GTACCTTCAAGAAGTTCACCT.2111.00110
...........................................................................................................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAGAAG........2211.00110
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAGTT......2511.00101
.............................................................................................................................................................................................................................................................................................................................GATGAAACTCTTAAGAAGA.........................1911.00101
..........................................................................................................................................................................................................................................................................................................................................AGAAGAAGCGTACCTTCAAGAAGTTCA....2711.00110
..............................................................................................................................................................................................................................................................................................................................ATGAAACTCTTAAGAAGAAGCGTA...................2411.00101
..................................................................................................................................................................................................................................................................................................................................AACTCTTAAGAAGAAGCGTAC..................2111.00110
.............................................................................................................................................................................................................................................................................................................................GATGAAACTCTTAAGAAG..........................1811.00110
......................................................................................................................................................................................................................................................................................................................................CTTAAGAAGAAGCGTACCTT...............2011.00101
.................................................................................................................................................................................................................................................................................................................................AAACTCTTAAGAAGAAGCGTAC..................2211.00110
.........................................................................................................................................................................................................................................................................................................................AGTTGATGAAACTCTTAAGAAGAAGC......................2611.00101
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTTCA....2111.00101
.............................................................................................................................................................................................................................................................................................................................GATGAAACTCTTAAGAAGAAGCGTACCT................2811.00110
..................................................................................................................................................................................................................................................................................................................................AACTCTTAAGAAGAAGCGTACCTT...............2411.00110
.............................................................................................................................................................................................................................................................................................................................................AGAAGCGTACCTTCAAGAAGTTCA....2411.00110
...............................................................................................................................................................................................................................................................................................................................................AAGCGTACCTTCAAGAAGTTCACC..2411.00110
...................................................................................................................................................................................................................................................................................................................................ACTCTTAAGAAGAAGCGTACC.................2111.00101
................................................................................................................................................................................................................................................................................................................................................AGCGTACCTTCAAGAAGTTC.....2011.00110
...........................................................................................................................................................................................................................................................................................................................................GAAGAAGCGTACCTTCAAGAAGTT......2411.00110
.................................................................................................................................................................................................................................................................................................................................AAACTCTTAAGAAGAAGCGTA...................2111.00110

Generated: 06/28/2015 at 04:25 PM