ID:

dsi_24260

 Coordinate:

3l:8773000-8773149 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-25.4 -25.3 -25.3

Flybase annnotation

five_prime_UTR [3l_8772902_8772999_-]; exon [3l_8770533_8772999_-]; intron [3l_8773000_8774284_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AATAAGGGAGAAGCTATTGATTGGATCACGTGGTTCGAAATTGTGATATTTTCCTATGGAAGTGATTAAGTTGGGCTAAACAAGGCTTTAACCGAATGATGCGACTCATTAAGCATAAACAATTTTATTATTACAGTCATAAAGTTTAGCTTTACATAATAGCTCAATTATTAATCCTATCCCGTTATCTTTACTTGCAGCAACGCAACCAAATAACCACAAAGAAGCCGTAACAAATACAATACCATAA
**************************************************.......(((((.(((((((((((((((...((((((......((((..((.((((...(((..(((((....)))))..))).)))).))..))))))))))......)))))))))..)))))))).)))..................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 M053
female body
.......................................ATTGTGATATTTTCCTATGGAAGTG.......................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................TAACCACAAAGAAGCCGTAACAAATA........... 26 0 1 1.00 1 1 0 0 0 0 0 0
...................................................TCCTATGGAAGTGATTAAGTTGGGC.............................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 1 0 0
........................................................................................................................................................................................................................CCACAAAGAAGCCGTA.................. 16 0 1 1.00 1 0 0 0 1 0 0 0
......................................................................................................................................................................................................AGCAACGCAACCAAATAACCACAAAGA......................... 27 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................CACAAAGAAGCCGTAACAA.............. 19 0 1 1.00 1 0 1 0 0 0 0 0
.................................................TTTCCTATGGAAGTGATTAAGT................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................ACAAGGCTTTAACCGAATGATGCGACT................................................................................................................................................ 27 0 1 1.00 1 0 0 1 0 0 0 0
................................................................ATTAAGTAGGGCTGAACA........................................................................................................................................................................ 18 2 4 0.50 2 0 0 2 0 0 0 0
.......................................................................................................................................GTCATAAAGTGTAGCT................................................................................................... 16 1 3 0.33 1 0 0 0 0 0 1 0
..............................TGGTCGGAAATTGTGATACT........................................................................................................................................................................................................ 20 3 5 0.20 1 1 0 0 0 0 0 0
.........................................TGTAATTTTTTCCTTTGGAAGT........................................................................................................................................................................................... 22 3 11 0.09 1 0 0 0 0 0 0 1
........................................................................................................................................................................................................................CCATAAAGAAGCCGTCAAAAA............. 21 3 15 0.07 1 0 1 0 0 0 0 0
.................................................................................AAGGCTTAAACCGAA.......................................................................................................................................................... 15 1 20 0.05 1 0 0 0 1 0 0 0

Anti-sense strand reads

TTATTCCCTCTTCGATAACTAACCTAGTGCACCAAGCTTTAACACTATAAAAGGATACCTTCACTAATTCAACCCGATTTGTTCCGAAATTGGCTTACTACGCTGAGTAATTCGTATTTGTTAAAATAATAATGTCAGTATTTCAAATCGAAATGTATTATCGAGTTAATAATTAGGATAGGGCAATAGAAATGAACGTCGTTGCGTTGGTTTATTGGTGTTTCTTCGGCATTGTTTATGTTATGGTATT
**************************************************.......(((((.(((((((((((((((...((((((......((((..((.((((...(((..(((((....)))))..))).)))).))..))))))))))......)))))))))..)))))))).)))..................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M023
head
...................................................................................................................................ATGTCAGGACTTCAAATCGAG.................................................................................................. 21 3 1 1.00 1 0 1 0 0 0 0 0
..................CTACCCTAGTCCACCAAGGTT................................................................................................................................................................................................................... 21 3 2 1.00 2 2 0 0 0 0 0 0
.........................................................................................................................................................TATATTATCGAGGTAGTAATTA........................................................................... 22 3 3 0.33 1 0 0 0 1 0 0 0
..................CTACCCTAGTCCACCAAG...................................................................................................................................................................................................................... 18 2 4 0.25 1 0 0 1 0 0 0 0
......................CCTAGTCCACCAAGGTT................................................................................................................................................................................................................... 17 2 18 0.17 3 2 0 0 0 0 1 0
.............................................................................................................................................TTAAAATCGAAATGT.............................................................................................. 15 1 20 0.15 3 0 0 0 0 3 0 0
...................................................................................................................................................................................AGGGGAATAGCAATGAA...................................................... 17 2 16 0.13 2 2 0 0 0 0 0 0
........................................................................................................................................................................GTAATTAGGCTAGGGC.................................................................. 16 2 20 0.10 2 2 0 0 0 0 0 0
...................TACCCTAGTCCACCAAG...................................................................................................................................................................................................................... 17 2 10 0.10 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................GGCATGGTTTATGTTCT...... 17 2 10 0.10 1 0 0 0 0 1 0 0
..................CTACCCTAGTCCACCAAGGT.................................................................................................................................................................................................................... 20 3 11 0.09 1 0 0 1 0 0 0 0
.................................................................................................................................TAAAGTGAGTATTTCAAA....................................................................................................... 18 2 18 0.06 1 0 0 0 0 1 0 0
.............................................................................................................................................................................CAGGATAGTGCAATAGAT........................................................... 18 3 19 0.05 1 0 0 0 0 0 0 1
..................GTACCCTAGTCCACCAAG...................................................................................................................................................................................................................... 18 3 20 0.05 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGATAATTGGTGTTTC.......................... 17 2 20 0.05 1 0 1 0 0 0 0 0
...................................................................................CCGAAATTGGCTATCT....................................................................................................................................................... 16 2 20 0.05 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:8772950-8773199 - dsi_24260 AATAAGG-------------------GAGAA-GCTATTGATTGGATCACGTGGTTCGAAATT-GTGATATTTT-CCTATGGAAGT-----GA------------------TTAAGTTGGGCTAAACAAGGCTTTA------------------ACCGAATGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCG---ACTC-ATTAAGCATAAACA--ATT--TTATTATT--ACAGTCATAAAGT------TTAGCTTTACATAATAGCTCAATTATTAATCCTATCCCGT--TA-TCTTTACTTGCAG-------CAACGCAACCAA---------------------------------------ATAACC--ACA-AAGAAGCCGTAACAAATACAA--TAC---CATAA----------------------------------------------
droSec2 scaffold_0:1259356-1259605 - AATAAGG-------------------GAGAA-GCTATTGATTGGATCACGTGGTTCGAAATT-GTGATATTTT-CCTATGGAAGT-----GA------------------TTAAGTTGGGCTAAACAAGGCTTTA------------------ACCGAATGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCG---ACTC-ATTAAGCATACAAA--ATG--TTATTATT--ACAGTCATAAAGT------TTAGCTTTACTTAATAGCTCAATTATTAATCCTATCCCGT--TA-TCTTTACTTGCAG-------CAACGCAACCAA---------------------------------------ATAACC--ACA-AAGAAGCCGTAACAAATACAA--TAC---CATAA----------------------------------------------
dm3 chr3L:8988616-8988867 - AATAAGG-------------------GAGAA-GCTATTGATTGGATCACGTGGTTCGGAATT-GTGGTATTTT-TCTATGGAAGT-----GA------------------TTAGATTGGGCTAAACTAGGCTTTA------------------AGCGAATGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA---GCTC-ATTGAGCATAAAAAAAATT--GTATTACC--ACAGTCACAAAGT------TTAGCTTTACATAATAGTTCAATTATTAATCCTACCCCGT--TA-TCTTTACTTGCAG-------CAACGCAACCAA---------------------------------------ATAACC--ACA-AAGAAGCCGTAACAAATACAA--TAC---CATAA----------------------------------------------
droEre2 scaffold_4784:5051761-5051940 + AATAAGG-------------------GAGAA-GTTTTTGATTCGATCACGTGGTTCGGAATT-GGGGTATTTT-CCTATGGA--------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA---ACTC-TTGAACCTTAAACA--TTT-----------------------------------------ATAATAGCTCAATTATTAATCCTTGTCCGT--TT-TCTTTACTTGCAG-------CAACGCAACCAA---------------------------------------ATAATC--ACA-AAGAAGCCGTAACAAATACAA--TAC---CATAA----------------------------------------------
droYak3 3L:2924480-2924700 + AATAGGG-------------------GAGAA-GTGATTGATTGGATCACGTGGTTCGGAATT-GGGGTATTTT-CCTATGGAACT-----TA------------------TCAAGTCGGGATTAACTAGGCTTTA------------------AACGA-------------------------------ACT---CTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA---ACTC-TTTAAACATAAACA--ATT------------------------------------------TAAAAGCTCAATTATTAATCCTTTCCCGTTTTT-TTTTTACTTGCAG-------CAACGCAACCAA---------------------------------------ATAACC--ACA-AAGAAGCCGTAACAAATACAA--TAC---CATAA----------------------------------------------
droEug1 scf7180000409467:199935-200138 - AAAATAA-------------------GAGAT-GTGATTGATTTGATCACGTGGTTTGGAATTTGGGGTACTTT-TTT--AAAAGA-----GA------------------GCAAATTTGGCTCAA--------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAGAACTTTATGATCGGTTTTTACGTAACTCTCTCATTGCCTTGCCTAA-------------------------------------------------------C-ATTAAGC--------------------------------------------------------------------------TTAT-------AT-CCTTTTTTTTCAG------GAAACACAACCAA---------------------------------------ATAACC--ACA-AAGAAGCCGTAACAATTACAA--TAC------------------------------------------------------
droBia1 scf7180000300910:2214737-2215065 + AAAATAA-------------------GA-AA-GTGATTGATTCGATCACGTGGTTGGGAACTGCTGGTATTTT-CCTCTGAAAGCGAAGCTAACTTTTAAGTTATCTTCCATAAAATGTACCCCAT-----C-GAAA----------------------------------------------------------------------------------------------------------------------------------CTTTTCTTTCCCAAATCCTAACATCTTGGGTCTTTCTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATAATCAACTAATTAGAGCCTTCTTAAGATAAAATCAA-CA---AAG---GTAACCTTAAAAG--GTT-------ATGGCA--GTGACT-AGCTTATCTGAAACTGTGCAGA----ATCATTTA-TAACCCTCTCTCAC--T--TTTCTAATTGCAG------GAAACGCAACCAA---------------------------------------ATAACC--ACA-AAG-AGCCGTAAGAATTAAAA--TAC---CCTAA----------------------------------------------
droTak1 scf7180000415356:204223-204342 + TTA-----------------------GAG-------------------------------------------------------T-----AA------------------TTAATTTAAGCCGA-----------------------------------------------------------------ACT---CTA--AAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAT-TTTAACCTT-TACAATACTT-TCTATAATTTCAG------GAAACGCAACCAA---------------------------------------ATAACC--ACA-AAG-AGCCGTAACAATTACAA--AAC---AATAA----------------------------------------------
droEle1 scf7180000491193:3226139-3226267 - TATTAAA-------------------G---------------------------------------------------------T-----CA------------------CTATATTTGGGTCAAC-----T-TTAA---------------------------------------------------------------------CCTC-------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAAAACT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACCCT-TCCCAT--TA-TGTTTACTTTCAG------GAAACGCAACCAA---------------------------------------ATAACC--ACA-AAGAAGCCGTAACCCTTATAA--TAC---CATAC----------------------------------------------
droRho1 scf7180000777034:62733-63037 - AAACTAA-------------------GAGAA-GTGATTGATACGATCACGTGGTTCGAAATAGGGAGTATTTTTCATTTGGGAGTTAAGTCA------------------TCAAATTGGGCTTTAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTTATTAAACTTTTAAAGAGTAATACAGTTTCTTCAAGGAAACATCTTTAAATGAAATTAGGCTTAACTTTGATCTGTTAATGAGTATTATTAATTATTGTGTGTTGTCATCAAAGTCATTAAATTTCTAAAAACTTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGACCCCT--TA-TCTTTTCTTACAG------GAACCGCAACCAA---------------------------------------ATAACT--ACA-AAGAAGCCGTAACAATTATAA--TAC---CATAA----------------------------------------------
droFic1 scf7180000451564:111278-111413 + AATAGTT--------------------------------------------------------TAAGTATTCT-CCC----------------------------------CAAAATGTTTACAAC-----T-TAAA---------------------------------------------------------------------CCAA-------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAACACT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAAC-ATATCCCC---TA-ACTTTACTTTCAG------GAAACGCAACCAA---------------------------------------ATAACC--ACA-AAGAAGCAGTAACAATAATAA--AAC---CATCA----------------------------------------------
droKik1 scf7180000302486:1481982-1482167 - AAA-TAT-------------------GACAA-GTGATTGGA-----------------------------------------------------------------------------AGCCGA-------------TCACGTGGTTATAGGTGCAAACCAG----------------------TAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------AATC---CAAAC---TT-TTGTTTATTTCAGGAAAAGGAAACGCAACCAAAA-------------------------------------ATAAGC--ACC-AAGAAGCCGTTACAATTATAA--TAC---CATAAATTATAATAGGAAACCAAGAGGAAACATAACCAAAACAAGCAGCAA
droAna3 scaffold_13337:7662637-7662715 + C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCTGCT--TCTCTTCTATTTGCAG------GAAACGCAACCAA---------------------------------------ATAAAC--ACA-AAGAAGCCGTAACAGTTAAAAAATAG---CATAA----------------------------------------------
droBip1 scf7180000395543:328827-328960 + GCAAGA------------------------------------CGATCACGTGGATGGGA-TT-G------------------------------------------------------------------------------------------TTTACTCG----------------------TGGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATACCCTATTTGACCAT-------------------------------------------------------------------GGAAC-CTTTCTAT---T--TTTTTCTTTACAG------GAAACGCAACCAA---------------------------------------ATAAAC--ACA-AAGAAGCCGTAACAACTAAAA----A---AATAA----------------------------------------------
dp5 XR_group5:426234-426416 - AAAATAT-------------------GTGAAATTGTTTGATCTGATCACGTGGCTGGGGAT--------------------------------------------------------------------------------------------ACAGACCGATTCGGATCAGTAGGCTAGGCGT-----ACT---CTA--CATAAATTGG-------------------------------------TTTAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--CTC-------------------------------------ACTAAC-GTATATAC---AT-ATTTCTTTTGCAG-------TAACGCAACCAA---------------------------------------ATAATCCAACA-AAGAAGCCGCCACAGTTGAAA--TATCAACACAA----------------------------------------------
droPer2 scaffold_67:306809-306991 + AAAATAT-------------------GAGAAATTGTTTGATCTGATCACGTGGCTGGGGAT--------------------------------------------------------------------------------------------ACAGACCGATTCGGATCAGTAGGCTAGGCGT-----ACT---CTA--CATAAATTGG-------------------------------------TTTAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--CTC-------------------------------------AGTAAC-GTATATAC---AT-ATTTCTTTTGCAG-------TAACGCAACCAA---------------------------------------ATAATCCAACA-AAGAAGCCGCCACAGTTGAAA--TATCAACACAA----------------------------------------------
droWil2 scf2_1100000004830:577471-577758 - AATGATG-------------------GTGAT-GATGATGATGG--------AGGGGG-------------------------------------------------------------GGATTA-------------TCACG-----------------TGACACGATTCCACAGCAGAGGGAA-----ACT---CCT--TTCATCTTGA-------------------------------------TTTTGCAATCGCCCTGCAAGCCTTTGC-----------------------------CTGGCC-------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTCTATCGCT--TCTACCATTGAGGATATCCAGTTAATGAAA-----------------------TTGACTTAAT-------------------------------------------------------------------TTA-ATATAAATGTTTTC-TT---TATTTTATATTTGCAG-------AAACTCAACCAAAACGAACGGGAGGTGAATCCTCATAAAATAAATTATAAAACAACC--ACA-AAGAAG-AGCAACAAATAG-T--TAC---AGCAA----------------------------------------------
droVir3 scaffold_13049:16525165-16525268 + TACTAAT-------------------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT------------------------------------------------------------------------ATTTA-TAATT---CGTTTA--TA-TTTCTAATTGCAG-AGCTGGCAACTTAACCAAAA------------------------AATAAAT------ATATAC--ACT-ACAAACTCGTAACGATTGTAA--TA-----ATAA----------------------------------------------
droGri2 scaffold_15110:12184859-12185213 - AATAATGTCTGGGTAAATTTTTTTGTGTGAA-GTGAGTGATT--------------------------------------------------------------------------CTGGCTGA-------------TCACGCGGCTCGAAT-ACGCTGCAAT-CCAATCAATGCATGAGGCCC-----AATTATCTAACTACAAATTCAAGCAACCAACAGCAACGAACACTTTAATCATCCATCATTTTGCAG--------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAAATTAATTGAAAACTGTTCGTTTGACTAAAGTTCAA--A---TAG---GCCA---TAGGAA--CAAAC-GGAAATGAAA----CAC---AA------TTATCCCTACTTAATACCTCTCTTTCTC--TCTCTCTCTC--CC-TCTGTGCTTGCAG-CCCTGGCAACTGAACCAAAA------------------------ACTAAACAA----ATAAAC--ACCACACTAGCTGCAGCAATTGTTA--TAT----ATTT----------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AATAAGG-------------------GAGAA-GCTATTGATTGGATCACGTGGTTCGAAATT-GTGATATTTT-CCTATGGAAGT-----GA------------------TTAAGTTGGGCTAAACAAGGCTTTA------------------ACCGAATGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCG---ACTC-ATTAAGCATAAACA--ATT--TTATTATT--ACAGTCATAAAGT------TTAGCTTTACATAATAGCTCAATTATTAATCCTATCCCGT--TA-TCTTTACTTGCAG-------CAACGCAACCAA---------------------------------------ATAACC--ACA-AAGAAGCCGTAACAAATACAA--TAC---CATAA----------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................ATT-GTGATATTTT-CCTATGGAAGT-----G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACC--ACA-AAGAAGCCGTAACAAATA..............................................................2611.00100000001000000000
........................................................................T-CCTATGGAAGT-----GA------------------TTAAGTTGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC--ACA-AAGAAGCCGTA.....................................................................1611.00100000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-------CAACGCAACCAA---------------------------------------ATAACC--ACA-AAGA............................................................................2711.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--ACA-AAGAAGCCGTAACAA.................................................................1911.00100000000001000000
......................................................................TTT-CCTATGGAAGT-----GA------------------TTAAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000001000000000
............................................................................................................................ACAAGGCTTTA------------------ACCGAATGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCG---ACT....................................................................................................................................................................................................................................................................2711.00100100000000000000
droSec2
AATAAGG-------------------GAGAA-GCTATTGATTGGATCACGTGGTTCGAAATT-GTGATATTTT-CCTATGGAAGT-----GA------------------TTAAGTTGGGCTAAACAAGGCTTTA------------------ACCGAATGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCG---ACTC-ATTAAGCATACAAA--ATG--TTATTATT--ACAGTCATAAAGT------TTAGCTTTACTTAATAGCTCAATTATTAATCCTATCCCGT--TA-TCTTTACTTGCAG-------CAACGCAACCAA---------------------------------------ATAACC--ACA-AAGAAGCCGTAACAAATACAA--TAC---CATAA----------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACC--ACA-AAGAAGCCGTAACA..................................................................2111.0010010
dm3
AATAAGG-------------------GAGAA-GCTATTGATTGGATCACGTGGTTCGGAATT-GTGGTATTTT-TCTATGGAAGT-----GA------------------TTAGATTGGGCTAAACTAGGCTTTA------------------AGCGAATGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA---GCTC-ATTGAGCATAAAAAAAATT--GTATTACC--ACAGTCACAAAGT------TTAGCTTTACATAATAGTTCAATTATTAATCCTACCCCGT--TA-TCTTTACTTGCAG-------CAACGCAACCAA---------------------------------------ATAACC--ACA-AAGAAGCCGTAACAAATACAA--TAC---CATAA----------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------------------------ATAACC--ACA-AAGAAGCCGTAAC...................................................................24124.002400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011706000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAACCAA---------------------------------------ATAACC--ACA-AAGA............................................................................2318.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AAGAAGCCGTAACAAATACAA--TAC---C..................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACC--ACA-AAGAAGCCGTAACAA.................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAA---------------------------------------ATAACC--ACA-AAGAAGCCGT......................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCCGTAACAAATACAA--TAC---CA.................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACC--ACA-AAGAAGCCGTAACAAAT...............................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AAGAAGCCGTAACAAATACAA--TAC---CAT................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................ATGGAAGT-----GA------------------TTAGATTGGGCTAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCAA---------------------------------------ATAACC--ACA-AAGAAGCCGTA.....................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAA---------------------------------------ATAACC--ACA-AAGA............................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................GA------------------TTAGATTGGGCTAAACTAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------ATAACC--ACA-AAGAAGCCGT......................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-AAGAAGCCGTAACAAATACAA--TAC---...................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------------------------ATAACC--ACA-AAGAAGCCGT......................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGCCGTAACAAATACAA--TAC---CAT................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AAGAAGCCGTAACAAATACAA--T........................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC--ACA-AAGAAGCCGTAACAA.................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTCACAAAGT------TTAGCTTT........................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA-AAGAAGCCGTAACAAATAC.............................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACCAA---------------------------------------ATAACC--ACA-AAGAAG..........................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................CTATGGAAGT-----GA------------------TTAGATTGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCGTAACAAATACAA--TAC---C..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................GT-----GA------------------TTAGATTGGGCTAAACTAGGCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................TTGGATCACGTGGTTCGGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................T-TCTATGGAAGT-----GA------------------TTAGATTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.....................................................................TTTT-TCTATGGAAGT-----GA------------------TTAGATTGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................GATCACGTGGTTCGGAATT-GTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------------------------ATAACC--ACA-AAGAAGCCG.......................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ATTGATTGGATCACGTGGTTCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................TTTT-TCTATGGAAGT-----GA------------------TTAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................................ATCACGTGGTTCGGAATT-GTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ATTGATTGGATCACGTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................AA-GCTATTGATTGGATCACGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACC--ACA-AAGAAGCCGTAAC...................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGCAACCAA---------------------------------------ATAACC--ACA-AAGAA...........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------------------------------------ATAACC--ACA-AAGAAGCCGTAACAA.................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------------------------ATAACC--ACA-AAGAAGCCGTAACAAAT...............................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACC--ACA-AAGAAGCCGTAAC...................................................................1911.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCGT--TA-TCTTTACTTGCAG-------...............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ATTGATTGGATCACGTGGTTCGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................ATCACGTGGTTCGGAATT-GTGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGCAACCAA---------------------------------------ATAACC--ACA-AAG.............................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-AAGAAGCCGTAACAAATACAA--TAC---C..................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TATTTT-TCTATGGAAGT-----GA------------------TTAGATTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCGTAACAAATACAA--TAC---CA.................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTACCCCGT--TA-TCTTTACTTGC........................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAAGT------TTAGCTTTACATAATAGT..............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------------------------------------ATAACC--ACA-AAGAAGCCGTAAC...................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAACCAA---------------------------------------ATAACC--ACA-AAGAAGCC........................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................AGGCTTTA------------------AGCGAATGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------ATAACC--ACA-AAGAAGCCGTAACA..................................................................2411.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TGATTGGATCACGTGGTTCGGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--ACA-AAGAAGCCGTAACAAATACAA--T........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AGAA-GCTATTGATTGGATCACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTACCCCGT--TA-TCTTTACTTGC........................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................ACGTGGTTCGGAATT-GTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------TTAGCTTTACATAATAGTT.............................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-AAGAAGCCGTAACAAA................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACC--ACAGTCACAAAGT------TTAGC...........................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------ATAACC--ACA-AAGAAGCCGTAAC...................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAA---------------------------------------ATAACC--ACA-AAGAAGC.........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TT-TCTATGGAAGT-----GA------------------TTAGATTGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................GGTATTTT-TCTATGGAAGT-----GA------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.......................................ATTGGATCACGTGGTTCGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
droEre2
AATAAGG-------------------GAGAA-GTTTTTGATTCGATCACGTGGTTCGGAATT-GGGGTATTTT-CCTATGGA--------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA---ACTC-TTGAACCTTAAACA--TTT-----------------------------------------ATAATAGCTCAATTATTAATCCTTGTCCGT--TT-TCTTTACTTGCAG-------CAACGCAACCAA---------------------------------------ATAATC--ACA-AAGAAGCCGTAACAAATACAA--TAC---CATAA----------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
AATAGGG-------------------GAGAA-GTGATTGATTGGATCACGTGGTTCGGAATT-GGGGTATTTT-CCTATGGAACT-----TA------------------TCAAGTCGGGATTAACTAGGCTTTA------------------AACGA-------------------------------ACT---CTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA---ACTC-TTTAAACATAAACA--ATT------------------------------------------TAAAAGCTCAATTATTAATCCTTTCCCGTTTTT-TTTTTACTTGCAG-------CAACGCAACCAA---------------------------------------ATAACC--ACA-AAGAAGCCGTAACAAATACAA--TAC---CATAA----------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACC--ACA-AAGAAGCCGTAACA..................................................................2311.00100000010000
droEug1
AAAATAA-------------------GAGAT-GTGATTGATTTGATCACGTGGTTTGGAATTTGGGGTACTTT-TTT--AAAAGA-----GA------------------GCAAATTTGGCTCAA--------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAGAACTTTATGATCGGTTTTTACGTAACTCTCTCATTGCCTTGCCTAA-------------------------------------------------------C-ATTAAGC--------------------------------------------------------------------------TTAT-------AT-CCTTTTTTTTCAG------GAAACACAACCAA---------------------------------------ATAACC--ACA-AAGAAGCCGTAACAATTACAA--TAC------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AAAATAA-------------------GA-AA-GTGATTGATTCGATCACGTGGTTGGGAACTGCTGGTATTTT-CCTCTGAAAGCGAAGCTAACTTTTAAGTTATCTTCCATAAAATGTACCCCAT-----C-GAAA----------------------------------------------------------------------------------------------------------------------------------CTTTTCTTTCCCAAATCCTAACATCTTGGGTCTTTCTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATAATCAACTAATTAGAGCCTTCTTAAGATAAAATCAA-CA---AAG---GTAACCTTAAAAG--GTT-------ATGGCA--GTGACT-AGCTTATCTGAAACTGTGCAGA----ATCATTTA-TAACCCTCTCTCAC--T--TTTCTAATTGCAG------GAAACGCAACCAA---------------------------------------ATAACC--ACA-AAG-AGCCGTAAGAATTAAAA--TAC---CCTAA----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TTA-----------------------GAG-------------------------------------------------------T-----AA------------------TTAATTTAAGCCGA-----------------------------------------------------------------ACT---CTA--AAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAT-TTTAACCTT-TACAATACTT-TCTATAATTTCAG------GAAACGCAACCAA---------------------------------------ATAACC--ACA-AAG-AGCCGTAACAATTACAA--AAC---AATAA----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TATTAAA-------------------G---------------------------------------------------------T-----CA------------------CTATATTTGGGTCAAC-----T-TTAA---------------------------------------------------------------------CCTC-------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAAAACT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAACCCT-TCCCAT--TA-TGTTTACTTTCAG------GAAACGCAACCAA---------------------------------------ATAACC--ACA-AAGAAGCCGTAACCCTTATAA--TAC---CATAC----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAACTAA-------------------GAGAA-GTGATTGATACGATCACGTGGTTCGAAATAGGGAGTATTTTTCATTTGGGAGTTAAGTCA------------------TCAAATTGGGCTTTAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTTATTAAACTTTTAAAGAGTAATACAGTTTCTTCAAGGAAACATCTTTAAATGAAATTAGGCTTAACTTTGATCTGTTAATGAGTATTATTAATTATTGTGTGTTGTCATCAAAGTCATTAAATTTCTAAAAACTTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGACCCCT--TA-TCTTTTCTTACAG------GAACCGCAACCAA---------------------------------------ATAACT--ACA-AAGAAGCCGTAACAATTATAA--TAC---CATAA----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AATAGTT--------------------------------------------------------TAAGTATTCT-CCC----------------------------------CAAAATGTTTACAAC-----T-TAAA---------------------------------------------------------------------CCAA-------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAACACT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAAC-ATATCCCC---TA-ACTTTACTTTCAG------GAAACGCAACCAA---------------------------------------ATAACC--ACA-AAGAAGCAGTAACAATAATAA--AAC---CATCA----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AAA-TAT-------------------GACAA-GTGATTGGA-----------------------------------------------------------------------------AGCCGA-------------TCACGTGGTTATAGGTGCAAACCAG----------------------TAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------AATC---CAAAC---TT-TTGTTTATTTCAGGAAAAGGAAACGCAACCAAAA-------------------------------------ATAAGC--ACC-AAGAAGCCGTTACAATTATAA--TAC---CATAAATTATAATAGGAAACCAAGAGGAAACATAACCAAAACAAGCAGCAASizeHit CountTotal NormTotal
No Reads
droAna3
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCTGCT--TCTCTTCTATTTGCAG------GAAACGCAACCAA---------------------------------------ATAAAC--ACA-AAGAAGCCGTAACAGTTAAAAAATAG---CATAA----------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
GCAAGA------------------------------------CGATCACGTGGATGGGA-TT-G------------------------------------------------------------------------------------------TTTACTCG----------------------TGGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATACCCTATTTGACCAT-------------------------------------------------------------------GGAAC-CTTTCTAT---T--TTTTTCTTTACAG------GAAACGCAACCAA---------------------------------------ATAAAC--ACA-AAGAAGCCGTAACAACTAAAA----A---AATAA----------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
AAAATAT-------------------GTGAAATTGTTTGATCTGATCACGTGGCTGGGGAT--------------------------------------------------------------------------------------------ACAGACCGATTCGGATCAGTAGGCTAGGCGT-----ACT---CTA--CATAAATTGG-------------------------------------TTTAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--CTC-------------------------------------ACTAAC-GTATATAC---AT-ATTTCTTTTGCAG-------TAACGCAACCAA---------------------------------------ATAATCCAACA-AAGAAGCCGCCACAGTTGAAA--TATCAACACAA----------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
AAAATAT-------------------GAGAAATTGTTTGATCTGATCACGTGGCTGGGGAT--------------------------------------------------------------------------------------------ACAGACCGATTCGGATCAGTAGGCTAGGCGT-----ACT---CTA--CATAAATTGG-------------------------------------TTTAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--CTC-------------------------------------AGTAAC-GTATATAC---AT-ATTTCTTTTGCAG-------TAACGCAACCAA---------------------------------------ATAATCCAACA-AAGAAGCCGCCACAGTTGAAA--TATCAACACAA----------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA-AAGAAGCCGCCACAGTT...............................................................2011.001001000
..............................AATTGTTTGATCTGATCACGTGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCCGCCACAGTTGAAA--TATC.....................................................2411.001100000
droWil2
AATGATG-------------------GTGAT-GATGATGATGG--------AGGGGG-------------------------------------------------------------GGATTA-------------TCACG-----------------TGACACGATTCCACAGCAGAGGGAA-----ACT---CCT--TTCATCTTGA-------------------------------------TTTTGCAATCGCCCTGCAAGCCTTTGC-----------------------------CTGGCC-------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTCTATCGCT--TCTACCATTGAGGATATCCAGTTAATGAAA-----------------------TTGACTTAAT-------------------------------------------------------------------TTA-ATATAAATGTTTTC-TT---TATTTTATATTTGCAG-------AAACTCAACCAAAACGAACGGGAGGTGAATCCTCATAAAATAAATTATAAAACAACC--ACA-AAGAAG-AGCAACAAATAG-T--TAC---AGCAA----------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACGAACGGGAGGTGAATCCT..............................................................................................................2311.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGAACGGGAGGTGAATCCT..............................................................................................................2211.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCAAAACGAACGGGAGG......................................................................................................................2011.00100010
droVir3
TACTAAT-------------------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT------------------------------------------------------------------------ATTTA-TAATT---CGTTTA--TA-TTTCTAATTGCAG-AGCTGGCAACTTAACCAAAA------------------------AATAAAT------ATATAC--ACT-ACAAACTCGTAACGATTGTAA--TA-----ATAA----------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAC--ACT-ACAAACTCGTA.....................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAC--ACT-ACAAACTCGTAACGATT...............................................................2611.001000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-ACAAACTCGTAACGATTGTAA--TA-----..................................................2411.001000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTAACGATTGTAA--T........................................................1620.501000000000000000000000000000000000000000000000000000000000000001
droGri2
AATAATGTCTGGGTAAATTTTTTTGTGTGAA-GTGAGTGATT--------------------------------------------------------------------------CTGGCTGA-------------TCACGCGGCTCGAAT-ACGCTGCAAT-CCAATCAATGCATGAGGCCC-----AATTATCTAACTACAAATTCAAGCAACCAACAGCAACGAACACTTTAATCATCCATCATTTTGCAG--------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAAATTAATTGAAAACTGTTCGTTTGACTAAAGTTCAA--A---TAG---GCCA---TAGGAA--CAAAC-GGAAATGAAA----CAC---AA------TTATCCCTACTTAATACCTCTCTTTCTC--TCTCTCTCTC--CC-TCTGTGCTTGCAG-CCCTGGCAACTGAACCAAAA------------------------ACTAAACAA----ATAAAC--ACCACACTAGCTGCAGCAATTGTTA--TAT----ATTT----------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTC--CC-TCTGTGCTTGCAG-.....................................................................................................................................................1911.00110

Generated: 05/18/2015 at 12:04 PM