ID:

dsi_24146

 Coordinate:

3l:12234868-12235113 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.8 -19.7 -19.7

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+
mature
  1. 3l:10435777-10435791 +
  2. dsi_24146  3l:12234987-12235001 -
  3. 3r:17549236-17549250 +
  4. 3r:18975833-18975847 -
star

Sense Strand Reads

CACCCAGTTTGGTAGGGATAACATCTTTGAATTACTTTGGAATGTCTACAGTGAGTACTAATATTATTACTATAACCAACATACAACATTTAAGAAACCAAAAAAGTCATAAAAATTAACTTATATTTATTAATAATTTGTATTGTTTGTTATATTGCTTGAAATGCTTTGAAAATTTTGATTAAATATGTTTTTTATGCTACATTAATTTTAAATTGACCTGCTCATGTGCCATTTATGAACTTTATTTTACAAAATGAACTGAAATGAATTATTTTTTTTTGTCAATCCTGCAGAGGCCAATCGGGACATCATGGACTGGAGCGGCAACAAGCCACTGGACTAC
**************************************************(((((((.............((((((.(((((((((...((((..........((((...........)))).......))))....))))).)))).))))))..((.(((((.((......................)).))))).))....((((((...))))))..))))))).......................((((((.(((.(((......))).))).))))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 O001
Testis
.......................................................................................................................................................................................................................................................................................................................TCATGGACTGGAGCGGCAAC............... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......................TCTTTGAATTACTCTGGAATGTCTACA........................................................................................................................................................................................................................................................................................................ 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................TCGGGACATCATGGACTGGAGC..................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................GGGACATCATGGACTGGAGC..................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........GGTAGGGATAACATCTTTG............................................................................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.................ATAACATCTTTGAATTACTTTGGAATGT............................................................................................................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................GGGACATCATGGACTGGAG...................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................CATGGACTGGAGCGGCAACAAGCC.......... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................TGTTGTCAATCCAGCAGATGCCA............................................ 23 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................................................................................TCTGAAATGGATCATTTTTTTT................................................................ 22 3 4 0.50 2 0 0 0 0 2 0 0 0 0 0
....................................................................................................................................................GTTATATTGGTTGAAA...................................................................................................................................................................................... 16 1 13 0.38 5 0 0 0 2 0 0 0 3 0 0
..................................................................................................................................................................AATGCTTTGAAAATT......................................................................................................................................................................... 15 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0
.......................................GAATGTCTAGAGTGA.................................................................................................................................................................................................................................................................................................... 15 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..............GGGATAACATCATAGGATT......................................................................................................................................................................................................................................................................................................................... 19 3 20 0.20 4 0 0 0 1 2 0 0 1 0 0
.....................................................................................................................................................................GCTTTGAAAATTTGGA..................................................................................................................................................................... 16 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................TGTACTGTAATGAAATATTTTT................................................................... 22 3 8 0.13 1 0 0 0 1 0 0 0 0 0 0
..........................................................AAATATTATTACTATAGGCAA........................................................................................................................................................................................................................................................................... 21 3 20 0.10 2 0 0 0 0 0 0 0 0 0 2
....................................................................................................................................................GTTATATTGCTTGAACT..................................................................................................................................................................................... 17 1 10 0.10 1 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................................................................................................................TACCAAATGAACTGAA................................................................................ 16 1 11 0.09 1 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................................................................................................................................................................................CAATGGCGACATGATGGACT.......................... 20 3 17 0.06 1 1 0 0 0 0 0 0 0 0 0
......GTTCGGAAGGGATAAC.................................................................................................................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

GTGGGTCAAACCATCCCTATTGTAGAAACTTAATGAAACCTTACAGATGTCACTCATGATTATAATAATGATATTGGTTGTATGTTGTAAATTCTTTGGTTTTTTCAGTATTTTTAATTGAATATAAATAATTATTAAACATAACAAACAATATAACGAACTTTACGAAACTTTTAAAACTAATTTATACAAAAAATACGATGTAATTAAAATTTAACTGGACGAGTACACGGTAAATACTTGAAATAAAATGTTTTACTTGACTTTACTTAATAAAAAAAAACAGTTAGGACGTCTCCGGTTAGCCCTGTAGTACCTGACCTCGCCGTTGTTCGGTGACCTGATG
**************************************************(((((((.............((((((.(((((((((...((((..........((((...........)))).......))))....))))).)))).))))))..((.(((((.((......................)).))))).))....((((((...))))))..))))))).......................((((((.(((.(((......))).))).))))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body		 M025
embryo
..................................................................................................................................................................................................................................................................................AAAAAAAAACGGTTAGGAC..................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................AAAAAAAAAAACTTTTAGGACGTCT................................................. 25 3 2 0.50 1 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................................AAAAAAAAGGTTTTGCTTGACTT................................................................................ 23 3 3 0.33 1 0 0 1 0 0 0 0
....................................................................................................................................................................................................................................................................................................................TGTCGTACCTGCCCTCGC.................... 18 2 3 0.33 1 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................................................................AAAAAAAAAAAACGGTTAGGAC..................................................... 22 2 6 0.17 1 1 0 0 0 0 0 0
.............................................................................................................ATTTTTAACTGAATCTAA........................................................................................................................................................................................................................... 18 2 20 0.15 3 0 0 0 0 3 0 0
.............................................................................................................ATGGTTAATTGAATATAGATA........................................................................................................................................................................................................................ 21 3 17 0.12 2 0 0 2 0 0 0 0
.................................................................................................................................................................................................................................................................................AAAAAAAAAACGGTTAGGAC..................................................... 20 2 12 0.08 1 1 0 0 0 0 0 0
...........................................CTGATGTCACTCACAATTA............................................................................................................................................................................................................................................................................................ 19 3 13 0.08 1 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................................................................................AAAAAACATTTAGCACGT................................................... 18 2 20 0.05 1 0 1 0 0 0 0 0
...................................................................................................................AATTGAATATAGATA........................................................................................................................................................................................................................ 15 1 20 0.05 1 0 0 1 0 0 0 0
...................................................................................................................................................................................................................................................................................AAAAAAAACGGTTAGGAG..................................................... 18 2 20 0.05 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................AAAAAAAAACGGTTAGGAG..................................................... 19 2 20 0.05 1 1 0 0 0 0 0 0
..........................................................TTTATAATAATGATATCCGTT........................................................................................................................................................................................................................................................................... 21 3 20 0.05 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................AAAAAAAAGGTTTTGCTTGAC.................................................................................. 21 3 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:12234818-12235163 - dsi_24146 CACCCAGTTTGGTAGGGATAACATCTTTGAATTACTTTGGAATGTCTACAGTGAGTACTAA-----------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------ATTAT--TACTATAACCAACATACAACATTTAAGAAACCAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA-GTCATAAAA---ATTAACTTATATTTATTAATAATTTGTATT-GTTTGTTATATTGCTTGAAATGCTTTGAAAAT---------TTTGATTAAATATGTTTTTTATGCTACATTAATTTTAAATTGA------------------------------------------------------------------------------------------------------------------------------CCT-------------------------------------GCTCATGTGCCATTTATGAACTTTA--TT-------------------TTACAAAATGAACTGAAATGAATTATTTTT--TTTTGTC--A--ATCCTGCAGAGGCCAATCGGGACATCATGGACTGGAGCGGCAACAAGCCACTGGACTAC
droSec2 scaffold_0:4719633-4719995 - CACCCAGTTTGGTAGGGATAACATCTTTGAATTACTTTGGAATGTTTACAGTGAGTACTAA-----------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------ATTAT--TACTACAACCAAAATACAACATTTAAGTAAGCAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGGTCATAATA---ATTAAACAATATTT-TTAATAATTTTTATT-GATTGTTATATTGATTGAAATGCTTTGAAAAT---------AATCACAAACTATGTTTTTTATGCGAAATTAATTTTAAATTGG------------------------------------------------------------------------------------------------------------------------------CTT-------------------------------------ACTGGTTTGCGATTTATGAACTG----CTGCTTATATTTACTTAAAAGTTGCAAAATAAACTGAATTAAATTATTTGT--TGTTGTC--A--ATCCTGCAGAGGCCAATCGGGACATCATGGACTGGAGCGGCAACAAGCCACTGGACTAC
dm3 chr3L:12533197-12533539 - TACCCAGTTTGGTAGGGATAATATCTTTGAATTACTCTGGAATGTCTACAGTGAGTACTAA-----------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------ATTAT--TACTACAACCAAAATACCACATTTAAGCAAGCAAAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCATAAAA---ATTAATAAATATTTATTCATAATTTTAAAT-GCTTATTATATTGCTCGAAATCCTTTGAAACTTATAAATACTTTGA-------------------------ACTTTTAAATTGA------------------------------------------------------------------------------------------------------------------------------CTT-------------------------------------GCTCATGTGCTATTTATAAACTTTA--CTGCTTTCATTTACTTAAGAGTTGCAAAATGAACTG-----AATTATTTGT--TGTTGTC--C--ATCCTGCAGAGGCCAATCGGGACATCATGGACTGGAGCGGCAACAAGCCACTGGACTAC
droEre2 scaffold_4784:12535687-12535869 - CACCCAATTCGGTAGAGATAATATCTTTGAACTACTGTGGAATGTGTACAGTAAGTATTAA-----------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------ATTAT--TACTAACATAAGAGTGCAACAAATATGTTACCAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGT----AAAAAT---AATAACTAATATTTATTA--------------ATTGTTATATTGCTTGAAACACTTTATAAAT---------AAGGGTTAAGTGGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTGTG--------------------
droYak3 3L:12595605-12595978 - CACCCAGTTTGGTAGAGATAACATCTTCGAACTACTCTGGAATGTCTACAGTAAGTATTAT-----------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------ACTAT--TATTAAT-------------ATTTAAAC----AAA-A-GTCAAAAAT-AAATATCTAATA--TTAAATATTAT------------------------------------------------------------------TAATACA-----------------------------------------------------------------------------AAA-GTCAAAAATA--AATATCTAATATTTAC------TGTTCACT-GTTTGTTATATTGCTTTA----------AAAT---------AATAGTTAAGTAGATTATTTGTTCTAAACGATATAGAGGTTTG------------------------------------------------------------------------------------------------------------------------------CTT-------------------------------------ATTTATATGCCATTTTTGGGCTTTAAAATGCCTGTATTTATTTAAAATATTCGAAATAAGCTGATATGAATTCTTCTT--TGT-GGC--A--ATCCTCCAGAGGCCAATCGGGACATCATGGACTGGAGCGGCAACAAGCCACTGGACTAC
droEug1 scf7180000409466:4625802-4625901 - TATAATA----GAAGATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA-------------------------------------------------------------TAGGTAATCCACTTTCTTTT-A--ACTT--TCAACAGAGGCCAATCGGGACATCATGGACTGGAGTGGCAACAAGCCACTGGACTAC
droBia1 scf7180000302334:1378222-1378341 - ATGA-------------------------------TCCCTGCTATATAAAGCAAATACC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATAATAACCA-------------------------------------------------------------TTTGCAACCCTCTTCCTCTC-G----CC--CCTTCAGAGGCCAACAGGGACATCATGGACTGGAGCGGCAACAAGCCCCTGGACTAC
droTak1 scf7180000415103:322835-322947 - AATATTATTCTCCAAAA---------------------------------TTCACTATTAA--------------------------------------------------------------------------------------------------------------------------------------------------ATTAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------------------------------------------------------------ATTGTAATCCTCTTTCTTTT-------C--TTTTTAGAGGCCAATAGGGACATCATGGACTGGAGTGGCAACAAGCCCCTGGACTAC
droEle1 scf7180000491255:907164-907502 - CACCCAATTTGGAAGAGATAACATATTCGAATTGCTCTGGAATGTATACAGTGAGTATTTGTTATTATTTTAAATGCTATGCTTTA-----AAAAT--------------TTATG---------------------------------------------------------------------------------------------------------------------------------------------T----------------------------------------TA---------------AAATGGCAAATCTTTTA---GA-----------------------------------------------------ATTCC-------TATCAAAATCTAGCTTGACAATTTTTTGTAATTTTAAAGAGGAATAAATTTCTTTCAATATATTTCGGTTACTTCA-ACT----ACAAAT---TATTACTTCTATTTA----------------------------------------------------------------------------------------CATTTTAATTAG------------------------------------------CCT---------------------------------------------------------------------------------CTT-------------------------------------GCTTATG----ATT---------------------------TTAAAAGT---------------TTTCTAATCCACTATTTGCT-A----TA--TTTGCAGAGGCCAATCGAGACATCATGGACTGGAGTGGCAACAAGCCACTGGACTAC
droRho1 scf7180000766291:17553-17906 + AACCCAGTTTGGAAGAGATAACATATTCGAATTGCTCTGGAATGTCTACAGTAAGTTTTTG-----------------------------------GATTTATTAAAAAATTAAGTTATTAACATTATGTGCATTATATGTGCATTTACGCGAATATATTAAAGGGATCTAGTTTATCAGGATTTTAAACTGTTATAAAAATTCCTAATGATAAACTATAAATGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTA-------------------------------------------------------------------------AAAAAATCATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAAGCTATAAAAATGGTAAAATTCTTACAACTGATGATAAACATAATAAATATAT-ATAATATCAA-------------------------------------------------------------TTTGTAATCCATTTTTTTAT-A----AT--TTCTCAGAGGCCAATCGGGACATCATGGACTGGAGTGGCAACAAGCCGCTGGACTAC
droFic1 scf7180000453839:498816-499182 + TACCCAATTTGGCAGAGATAATATATTTGAACTACTTTGGAATGTCTACAGTAAGTATTGATTATTTATTT----ATTATGTTTTTATAAATAAAA--------------TTATG---------------------------------------------------------------------------------------------------------------------------------------------T----------------------------------------TA---------------A--TCGAATATTTCTTCACTGT--------ATTTTATTGAAGTATATTCGGACAAAAAAGGAATTTAAATAAAGAGTGCC-------CTT-------------------------------------------------------------------------AAAAGATCTTAACA-TTATTGAAGAACACCT-TTAACAAA-------AA-----------------------------------------------------------TTTGCTATATAAAT-------------------------------------------------------------------------TAATTAATTTTTCTTCAAATATATTTTTGTACTAAAAGAAAAAGT-ACA--AAAGTT----------------------------------------------C--------------------------------------------AAGT---------------TTTTTAACCCTTTTTCTGTT-GC----AA-TTTCTAGAGGCCAATCGGGACATCATGGACTGGAGTGGCAACAAGCCGCTGGACTAC
droKik1 scf7180000302272:142914-143148 - CACCCAATTTGGCAGAGATAATATCTTTGAATTACTCTGGAATGTTTACAGTAAGTATTTA-----------------------------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTATAGAT---TA---------------TAAAAATAAAACCTCTA---GATAAATATA------------------TG---------GGAATT--------AAGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------CTATGAAACCTTTAAACACCTTCACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACATTATTCT-------------------------------------------------------------TATGTAACCCCTTATTTTAA-T----CA--TTTCCAGAGGCCAATCGTGACATTATGGACTATAGCGGCAACAAACCCTTGGATTAT
droAna3 scaffold_13337:3489220-3489438 + AACACAATTTGGCAGAGACAACATATTTGAATTGCTTTGGAACACTTACAGTAAGTACCAA--------------------------------------------------------------------------------------------------------------------------------------------------ATTATAAATTCTAAATGTTGAAAAATCTGTTGGACAAGCCACTTATCTTG----------------------------------A-GCCAATATTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTAAATATACATTA--------------A----------------------------------------------------------------------------------------------------------------TTTATAAATCAATTTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT-------T--TGAACAGAGGCCAATCGTGACATAATGGACTGGAGTGGCAACAAGCCCCTGGACTAC
droBip1 scf7180000396387:118320-118550 - CACACAATTTGGCAGAGATAACATATTTGAATTGCTTTGGAACACATATAGTAAGTATATG-----------------------------------CACT-----------------------------------------------------------------------------------------------------------------------------------------------------TCAT--TATGCAT-------------TTTT---------AA-A-GTAATAAAC-AA------CATA--TTAAATATTATA-----------------------------------------------------------------TGACCCA-----------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------CATATAAAATTGTATATCAATATATACATGTTTATTTATAAATCACTGTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT-------G--TCAATAGAGGCCAATCGTGACATAATGGACTGGAGTGGCAACAAGCCCCTGGACTAC
dp5 XR_group6:3315966-3316030 - AACTCAGTTTGGAAGAGATAATATCTTTGAATTACTGTGGAATGTCTACAGTAAGTATTCG-----------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------ATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_9:1612929-1612993 - AACTCAGTTTGGAAGAGACAATATCTTTGAATTACTGTGGAATGTCTACAGTAAGTATTCG-----------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------ATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004949:167051-167128 + CACCCAGTTCGGAAGGGATAATATTTTTGAGCTGCTTTGGAATGTATACAGTAAGTAAAAA-----------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------TTTAT--ATTTCAAACCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:19300630-19300873 + dvi_20630 TACCCAATTCGGAAGGCAAAATATATACGAACTACTATGGAATGTTTACAGTACGTATTCC-----------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------ATTATATTG----------------------------------A-TTCATGAACGAA------TGTA--TTGGATATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATCGAAATGGTCAAGATACATATGAGAATACATATCA--------------------------GTCTTATGCTTCATGTGTAAATTGA------------------------------------------------------------TTA-------------------------------------A----------ATTAACGA----------------------------------------------------A------TCTCTT-GCAAACT--CCTTTAGAGGCCAATCGGGACATTATGGATTGGAGTGGAAATAAGCCATTGGACTAC
droMoj3 scaffold_6680:7037019-7037076 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCAGAGGCTAATCGTGACATTATGGACTGGAGTGGCAATAAGCCATTGGACTAT
droGri2 scaffold_15110:16986666-16986760 + CACACAATTTGGAAGGGATAATATATTCGAATTACTCTGGAATGTTTACAGTAAGCCTATC-----------------------------------TAA-----------------------------------------------------------------------------------------------------------------------------------------------------AATAT--TATTATCATCTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACTTCAATTAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CACCCAGTTTGGTAGGGATAACATCTTTGAATTACTTTGGAATGTCTACAGTGAGTACTAA-----------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------ATTAT--TACTATAACCAACATACAACATTTAAGAAACCAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA-GTCATAAAA---ATTAACTTATATTTATTAATAATTTGTATT-GTTTGTTATATTGCTTGAAATGCTTTGAAAAT---------TTTGATTAAATATGTTTTTTATGCTACATTAATTTTAAATTGA------------------------------------------------------------------------------------------------------------------------------CCT-------------------------------------GCTCATGTGCCATTTATGAACTTTA--TT-------------------TTACAAAATGAACTGAAATGAATTATTTTT--TTTTGTC--A--ATCCTGCAGAGGCCAATCGGGACATCATGGACTGGAGCGGCAACAAGCCACTGGACTACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGGACTGGAGCGGCAAC...............2011.00100000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGACATCATGGACTGGAGC.....................2211.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGACATCATGGACTGGAGC.....................2011.00100100000000000000
..........GGTAGGGATAACATCTTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
.................ATAACATCTTTGAATTACTTTGGAATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGACATCATGGACTGGAG......................1911.00100000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGACTGGAGCGGCAACAAGCC..........2411.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCTTTGAAAAT---------T.......................................................................................................................................................................................................................................................................................................................................................................1540.25100000000010000000
droSec2
CACCCAGTTTGGTAGGGATAACATCTTTGAATTACTTTGGAATGTTTACAGTGAGTACTAA-----------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------ATTAT--TACTACAACCAAAATACAACATTTAAGTAAGCAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGGTCATAATA---ATTAAACAATATTT-TTAATAATTTTTATT-GATTGTTATATTGATTGAAATGCTTTGAAAAT---------AATCACAAACTATGTTTTTTATGCGAAATTAATTTTAAATTGG------------------------------------------------------------------------------------------------------------------------------CTT-------------------------------------ACTGGTTTGCGATTTATGAACTG----CTGCTTATATTTACTTAAAAGTTGCAAAATAAACTGAATTAAATTATTTGT--TGTTGTC--A--ATCCTGCAGAGGCCAATCGGGACATCATGGACTGGAGCGGCAACAAGCCACTGGACTACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................TAACATCTTTGAATTACTTTGGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATGGACTGGAGCGGCAACAAGCCACT.......2911.0010010
.....................CATCTTTGAATTACTTTGGAATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGCGGCAACAAGCCACT.......2111.0010010
.....AGTTTGGTAGGGATAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000
dm3
TACCCAGTTTGGTAGGGATAATATCTTTGAATTACTCTGGAATGTCTACAGTGAGTACTAA-----------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------ATTAT--TACTACAACCAAAATACCACATTTAAGCAAGCAAAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCATAAAA---ATTAATAAATATTTATTCATAATTTTAAAT-GCTTATTATATTGCTCGAAATCCTTTGAAACTTATAAATACTTTGA-------------------------ACTTTTAAATTGA------------------------------------------------------------------------------------------------------------------------------CTT-------------------------------------GCTCATGTGCTATTTATAAACTTTA--CTGCTTTCATTTACTTAAGAGTTGCAAAATGAACTG-----AATTATTTGT--TGTTGTC--C--ATCCTGCAGAGGCCAATCGGGACATCATGGACTGGAGCGGCAACAAGCCACTGGACTACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCGGCAACAAGCCACTGGACTA.2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGACATCATGGACTGGAGCGGC..................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000001000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATGGACTGGAGCGGCA.................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGACTGGAGCGGCAACAAGCC..........2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATGGACTGGAGCGGCAACAAGC...........2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATGGACTGGAGCGGCA.................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCGGCAACAAGCCACTGGACTAC2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAATCGGGACATCATGGAC...........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATGGACTGGAGCGGCAAC...............2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGGACTGGAGCGGCA.................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATGGACTGGAGCGGC..................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCATGGACTGGAGCGGCAACAA.............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TTACTCTGGAATGTCTACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGACTGGAGCGGCAAC...............1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCATGGACTGGAGCGGCA.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGACATCATGGACTGGAGCGGATC................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGGACTGGAGCGGCAA................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TCTTTGAATTACTCTGGAATGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGACTGGAGCGGCAACAAGCCAC........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGGACTGGAGCGGCAACAAGCCAC........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
........TTGGTAGGGATAATATCTTTGAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCATGGACTGGAGCGG...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGACTGGAGCGGCAAC...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTGGTAGGGATAATATCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGACATCATGGACTGGAGCGGC..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATGGACTGGAGCGGCAACAAGCCA.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACTTTGA-------------------------ACTTTTAAATTGA------------------------------------------------------------------------------------------------------------------------------CT.............................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGACATCATGGACTGGAGC.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATCTTTGAATTACTCTGGAATGTCTACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGACTGGAGCGGCAACAAGCCACTG......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGGACTGGAGCGGCAACAAGCCA.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGT--TGTTGTC--C--ATCCTGCAG..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTTGAATTACTCTGGAATGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATGGACTGGAGCGG...................1811.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CCAGTTTGGTAGGGATAATATCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TACTCTGGAATGTCTACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATCGGGACATCATGGACTGGAGCGG...................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGT--TGTTGTC--C--ATCCTGC....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCAATCGGGACATCATGGACTGGA.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGACTGGAGCGGCAACAAGCCACTG......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.......................TCTTTGAATTACTCTGGAATGTCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTGGAGCGGCAACAA.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCGGGACATCATGGACTGGAGC.....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGACATCATGGACTGGAGCGGCA.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGGACTGGAGCGGCAACAAGCCACTG......2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTC--C--ATCCTGCAGAGGCC.............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATCATGGACTGGAGC.....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
droEre2
CACCCAATTCGGTAGAGATAATATCTTTGAACTACTGTGGAATGTGTACAGTAAGTATTAA-----------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------ATTAT--TACTAACATAAGAGTGCAACAAATATGTTACCAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGT----AAAAAT---AATAACTAATATTTATTA--------------ATTGTTATATTGCTTGAAACACTTTATAAAT---------AAGGGTTAAGTGGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTGTG--------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
CACCCAGTTTGGTAGAGATAACATCTTCGAACTACTCTGGAATGTCTACAGTAAGTATTAT-----------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------ACTAT--TATTAAT-------------ATTTAAAC----AAA-A-GTCAAAAAT-AAATATCTAATA--TTAAATATTAT------------------------------------------------------------------TAATACA-----------------------------------------------------------------------------AAA-GTCAAAAATA--AATATCTAATATTTAC------TGTTCACT-GTTTGTTATATTGCTTTA----------AAAT---------AATAGTTAAGTAGATTATTTGTTCTAAACGATATAGAGGTTTG------------------------------------------------------------------------------------------------------------------------------CTT-------------------------------------ATTTATATGCCATTTTTGGGCTTTAAAATGCCTGTATTTATTTAAAATATTCGAAATAAGCTGATATGAATTCTTCTT--TGT-GGC--A--ATCCTCCAGAGGCCAATCGGGACATCATGGACTGGAGCGGCAACAAGCCACTGGACTACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............GAGATAACATCTTCGAACTACTCTGGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.00200000000002
.............AGAGATAACATCTTCGAACTACTCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
droEug1
TATAATA----GAAGATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA-------------------------------------------------------------TAGGTAATCCACTTTCTTTT-A--ACTT--TCAACAGAGGCCAATCGGGACATCATGGACTGGAGTGGCAACAAGCCACTGGACTACSizeHit CountTotal NormTotal
No Reads
droBia1
ATGA-------------------------------TCCCTGCTATATAAAGCAAATACC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATAATAACCA-------------------------------------------------------------TTTGCAACCCTCTTCCTCTC-G----CC--CCTTCAGAGGCCAACAGGGACATCATGGACTGGAGCGGCAACAAGCCCCTGGACTACSizeHit CountTotal NormTotal
No Reads
droTak1
AATATTATTCTCCAAAA---------------------------------TTCACTATTAA--------------------------------------------------------------------------------------------------------------------------------------------------ATTAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------------------------------------------------------------ATTGTAATCCTCTTTCTTTT-------C--TTTTTAGAGGCCAATAGGGACATCATGGACTGGAGTGGCAACAAGCCCCTGGACTACSizeHit CountTotal NormTotal
No Reads
droEle1
CACCCAATTTGGAAGAGATAACATATTCGAATTGCTCTGGAATGTATACAGTGAGTATTTGTTATTATTTTAAATGCTATGCTTTA-----AAAAT--------------TTATG---------------------------------------------------------------------------------------------------------------------------------------------T----------------------------------------TA---------------AAATGGCAAATCTTTTA---GA-----------------------------------------------------ATTCC-------TATCAAAATCTAGCTTGACAATTTTTTGTAATTTTAAAGAGGAATAAATTTCTTTCAATATATTTCGGTTACTTCA-ACT----ACAAAT---TATTACTTCTATTTA----------------------------------------------------------------------------------------CATTTTAATTAG------------------------------------------CCT---------------------------------------------------------------------------------CTT-------------------------------------GCTTATG----ATT---------------------------TTAAAAGT---------------TTTCTAATCCACTATTTGCT-A----TA--TTTGCAGAGGCCAATCGAGACATCATGGACTGGAGTGGCAACAAGCCACTGGACTACSizeHit CountTotal NormTotal
No Reads
droRho1
AACCCAGTTTGGAAGAGATAACATATTCGAATTGCTCTGGAATGTCTACAGTAAGTTTTTG-----------------------------------GATTTATTAAAAAATTAAGTTATTAACATTATGTGCATTATATGTGCATTTACGCGAATATATTAAAGGGATCTAGTTTATCAGGATTTTAAACTGTTATAAAAATTCCTAATGATAAACTATAAATGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTA-------------------------------------------------------------------------AAAAAATCATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAAGCTATAAAAATGGTAAAATTCTTACAACTGATGATAAACATAATAAATATAT-ATAATATCAA-------------------------------------------------------------TTTGTAATCCATTTTTTTAT-A----AT--TTCTCAGAGGCCAATCGGGACATCATGGACTGGAGTGGCAACAAGCCGCTGGACTACSizeHit CountTotal NormTotal
No Reads
droFic1
TACCCAATTTGGCAGAGATAATATATTTGAACTACTTTGGAATGTCTACAGTAAGTATTGATTATTTATTT----ATTATGTTTTTATAAATAAAA--------------TTATG---------------------------------------------------------------------------------------------------------------------------------------------T----------------------------------------TA---------------A--TCGAATATTTCTTCACTGT--------ATTTTATTGAAGTATATTCGGACAAAAAAGGAATTTAAATAAAGAGTGCC-------CTT-------------------------------------------------------------------------AAAAGATCTTAACA-TTATTGAAGAACACCT-TTAACAAA-------AA-----------------------------------------------------------TTTGCTATATAAAT-------------------------------------------------------------------------TAATTAATTTTTCTTCAAATATATTTTTGTACTAAAAGAAAAAGT-ACA--AAAGTT----------------------------------------------C--------------------------------------------AAGT---------------TTTTTAACCCTTTTTCTGTT-GC----AA-TTTCTAGAGGCCAATCGGGACATCATGGACTGGAGTGGCAACAAGCCGCTGGACTACSizeHit CountTotal NormTotal
No Reads
droKik1
CACCCAATTTGGCAGAGATAATATCTTTGAATTACTCTGGAATGTTTACAGTAAGTATTTA-----------------------------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTATAGAT---TA---------------TAAAAATAAAACCTCTA---GATAAATATA------------------TG---------GGAATT--------AAGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------CTATGAAACCTTTAAACACCTTCACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACATTATTCT-------------------------------------------------------------TATGTAACCCCTTATTTTAA-T----CA--TTTCCAGAGGCCAATCGTGACATTATGGACTATAGCGGCAACAAACCCTTGGATTATSizeHit CountTotal NormTotal
No Reads
droAna3
AACACAATTTGGCAGAGACAACATATTTGAATTGCTTTGGAACACTTACAGTAAGTACCAA--------------------------------------------------------------------------------------------------------------------------------------------------ATTATAAATTCTAAATGTTGAAAAATCTGTTGGACAAGCCACTTATCTTG----------------------------------A-GCCAATATTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTAAATATACATTA--------------A----------------------------------------------------------------------------------------------------------------TTTATAAATCAATTTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT-------T--TGAACAGAGGCCAATCGTGACATAATGGACTGGAGTGGCAACAAGCCCCTGGACTACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACATAATGGACTGGAGTGGC..................2314.004000040
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAATGGACTGGAGTGGC..................1912.002100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATAATGGACTGGAGTGGC..................2111.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGTGACATAATGGACTGGAGTGGC..................2711.001010000
..CACAATTTGGCAGAGACAACATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100
droBip1
CACACAATTTGGCAGAGATAACATATTTGAATTGCTTTGGAACACATATAGTAAGTATATG-----------------------------------CACT-----------------------------------------------------------------------------------------------------------------------------------------------------TCAT--TATGCAT-------------TTTT---------AA-A-GTAATAAAC-AA------CATA--TTAAATATTATA-----------------------------------------------------------------TGACCCA-----------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------CATATAAAATTGTATATCAATATATACATGTTTATTTATAAATCACTGTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT-------G--TCAATAGAGGCCAATCGTGACATAATGGACTGGAGTGGCAACAAGCCCCTGGACTACSizeHit CountTotal NormTotal
No Reads
dp5
AACTCAGTTTGGAAGAGATAATATCTTTGAATTACTGTGGAATGTCTACAGTAAGTATTCG-----------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------ATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
AACTCAGTTTGGAAGAGACAATATCTTTGAATTACTGTGGAATGTCTACAGTAAGTATTCG-----------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------ATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................ATCTTTGAATTACTGTGGAATGTCTACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002200000
..............GAGACAATATCTTTGAATTACTGTGGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
droWil2
CACCCAGTTCGGAAGGGATAATATTTTTGAGCTGCTTTGGAATGTATACAGTAAGTAAAAA-----------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------TTTAT--ATTTCAAACCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................AATATTTTTGAGCTGCTTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.............AGGGATAATATTTTTGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
...................AATATTTTTGAGCTGCTTTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
droVir3
TACCCAATTCGGAAGGCAAAATATATACGAACTACTATGGAATGTTTACAGTACGTATTCC-----------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------ATTATATTG----------------------------------A-TTCATGAACGAA------TGTA--TTGGATATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATCGAAATGGTCAAGATACATATGAGAATACATATCA--------------------------GTCTTATGCTTCATGTGTAAATTGA------------------------------------------------------------TTA-------------------------------------A----------ATTAACGA----------------------------------------------------A------TCTCTT-GCAAACT--CCTTTAGAGGCCAATCGGGACATTATGGATTGGAGTGGAAATAAGCCATTGGACTACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........CGGAAGGCAAAATATATACGAACTACTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002000000000000000000000000000000000000000000000020000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCGGGACATTATGGATT..........................2011.001000000000001000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTATGGATTGGAGTGGA..................1911.001000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTATGGATTGGAGTGGAAA................2111.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGAAATAAGCCATTGGAC...2111.001010000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAATACATATCA--------------------------GTCTTA..............................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCA--------------------------GTCTTATGCTTCATGTGT..................................................................................................................................................................................................................................................................2211.001000000000000000010000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATTGGAGTGGAAAT...............1811.001000000000000000000000000000000000010000000000000000000000000000
droMoj3
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCAGAGGCTAATCGTGACATTATGGACTGGAGTGGCAATAAGCCATTGGACTATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGACATTATGGACTGGAG......................2011.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTGACATTATGGACTGGAGTGGCA.................2711.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTGACATTATGGACTGGAGT.....................2311.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATCGTGACATTATGGACTGGAGTG....................2711.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTATGGACTGGAGTGGCAA................2111.001100000
droGri2
CACACAATTTGGAAGGGATAATATATTCGAATTACTCTGGAATGTTTACAGTAAGCCTATC-----------------------------------TAA-----------------------------------------------------------------------------------------------------------------------------------------------------AATAT--TATTATCATCTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACTTCAATTAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
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Generated: 05/19/2015 at 02:28 PM