ID:

dsi_23991

 Coordinate:

3r:22530957-22531106 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-45.9 -45.9 -45.7

Flybase annnotation

five_prime_UTR [3r_22530898_22530956_-]; exon [3r_22530054_22530956_-]; intron [3r_22530957_22531282_-]

Repeatable elements

NameClassFamilyStrand
(CA)nSimple_repeatSimple_repeat+
mature
  1. 2l:4822755-4822771 -
  2. 3l:925722-925738 -
  3. 3l:13437398-13437414 +
  4. 3r:18619762-18619778 +
  5. dsi_23991  3r:22531073-22531089 -
  6. x:3572297-3572313 +
  7. x:10776080-10776096 -
  8. x:11893162-11893178 +
star

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GAGGCGCATGTTTTGTTTTTTCGTGCACTGTACCGTGGGCTCGGTGTGTGTTTGTGTGCGTCGGTGTGCCTGTGCGTGTGTGTGTACACATTTTAGGCGGCAATGGTGTGGGGCCCTGGCCAGCCGATAGTCCGCCGCGCCGCGAATGTTATCGATAGAAGAGCCCTAACCATTTGTTGTTTGTTTTCCTATTGTTGCAGTTTTCATGTCTATATAAACAAACGCATAGCGAAAGTCGGTTAAAAAATCA
**************************************************((((((.(((.(((((.(((((...((((((....))))))..)))))(((..((((..((...))..))))))).......))))))))))))))(((...((((((.(((((..((((.....))))...))))).))))))..))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
...................TTCGTGCACTGTACCGTG..................................................................................................................................................................................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................AAACGCATAGCGAAAGTC............. 18 0 1 1.00 1 0 1 0 0 0 0 0 0
..................................................TTTGTGTGCGTCGTTGTGCCT................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0
............................................TGTGTGTTTGTGTGCGTCGGTG........................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0
.............................................GTGTGTTTGTGTGCGTCGGT......................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0
...............TTTTTTCGTGCACTGTACCGTG..................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0
...................................................TTGTGTGCGTCGGTGTGCCC................................................................................................................................................................................... 20 1 1 1.00 1 0 0 0 0 1 0 0 0
............................................TGTGTGTTTGTGTGCGTCGG.......................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0
............................................TGTGTGTTTGTGTGCGTCGGTA........................................................................................................................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................ATAGCGAAAGTCGATGAA....... 18 2 8 0.88 7 0 0 7 0 0 0 0 0
.....................................................................................................AATGTTGTGGGGCCCT..................................................................................................................................... 16 1 2 0.50 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................GAAAGTCGGTTAAAAA.... 16 0 2 0.50 1 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................GAATAGCGAAAGTCGATGAA....... 20 3 11 0.18 2 0 0 2 0 0 0 0 0
......................................................................................................................................................................................................................................GAAGGTCGGTTAAAAA.... 16 1 6 0.17 1 0 1 0 0 0 0 0 0
...................................................................GCCTGTGCGTGTGTGTG...................................................................................................................................................................... 17 0 8 0.13 1 0 1 0 0 0 0 0 0
...............................................................................................GCCAGCAATGGTGTGGGG......................................................................................................................................... 18 2 9 0.11 1 0 1 0 0 0 0 0 0
...............TTTTTTCGTGTACTGGA.......................................................................................................................................................................................................................... 17 2 20 0.10 2 0 0 0 2 0 0 0 0
...............TTTTTTCGTGCACTGGAT......................................................................................................................................................................................................................... 18 2 16 0.06 1 1 0 0 0 0 0 0 0
.................................................................................................CGGCTATCGTGTGGGGGCC...................................................................................................................................... 19 3 16 0.06 1 0 0 0 1 0 0 0 0
.................................................GTTTCCGTGCGTCGGT......................................................................................................................................................................................... 16 2 20 0.05 1 0 1 0 0 0 0 0 0
...................................................................................................................................CCGCCGCGCCGGGGA........................................................................................................ 15 2 20 0.05 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

CTCCGCGTACAAAACAAAAAAGCACGTGACATGGCACCCGAGCCACACACAAACACACGCAGCCACACGGACACGCACACACACATGTGTAAAATCCGCCGTTACCACACCCCGGGACCGGTCGGCTATCAGGCGGCGCGGCGCTTACAATAGCTATCTTCTCGGGATTGGTAAACAACAAACAAAAGGATAACAACGTCAAAAGTACAGATATATTTGTTTGCGTATCGCTTTCAGCCAATTTTTTAGT
**************************************************((((((.(((.(((((.(((((...((((((....))))))..)))))(((..((((..((...))..))))))).......))))))))))))))(((...((((((.(((((..((((.....))))...))))).))))))..))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
................AGAAAGCACGTGACATGGCAC..................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
................AAAAAGCACGTGACATGGCAC..................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................CTGTCAGGCGGGGCGGGGCT......................................................................................................... 20 3 8 0.13 1 0 0 1 0 0
..........................................................................................................................................................................................................AAGTACAGTTATATTT................................ 16 1 16 0.06 1 0 1 0 0 0
..............................................................................................................................................................TTCTCGCGATTGGTTAA........................................................................... 17 2 19 0.05 1 0 1 0 0 0
..............................................................................................................................................................................................................ACAGATATAGTTGGTTG........................... 17 2 20 0.05 1 0 1 0 0 0
.............................................................................................................................................................CTTCTCGGGATAGGGAAG........................................................................... 18 3 20 0.05 1 0 0 0 1 0
.........................................................................................................................TCGGCTATCAGGGGGA................................................................................................................. 16 2 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:22530907-22531156 - dsi_23991 GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCT----------------C-GGTGTG-----------------------TGTTTGTG--------------------TGCGTCGGTGTGC-------CTGTGCGTG--------TGTGTGTACACATTTTAGGCGGCAATGGTGTGGGGCCCTGGC---CA-GCCGATAGTCCGCCGCGCCGC--GAAT------G--------------TTATCGATAGA----AG--------------------------------------------------------------AGC----CCTAACCATTTGTT-----GTTTGTTTT----------CCTATTG---------------------------TTG--CAGTTTTC--ATGTCTA-------------------------TATAAACAAACGCAT--AG---CGAAAGTCGGTTAAAAAATCA
droSec2 scaffold_13:1843391-1843640 - GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCT----------------C-GGTGTG-----------------------TGTTTGTG--------------------TGCGTCGGTGTGC-------CTGTGCGTG--------TGTGTGTACACATTTTAGGCGGCAATGGTGTGGGGCCCTGGC---CA-GCCGATAGTCCGCCGCGCCGC--GAAT------G--------------TTATCGATAGA----AG--------------------------------------------------------------AGC----CCTAACCATTTGTT-----GTTTGTTTT----------CCTTTTG---------------------------TTG--CAGTTTTC--ATGTCTA-------------------------TATAAACAAACGCAT--AG---CGAAAGTCGGTTAAAAAATCA
dm3 chr3R:23089124-23089373 - GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCT----------------C-AGTGTG-----------------------TGTGTGTG--------------------TGCGTCGGTGTGC-------CTGTGCGTG--------TGTGTGTACACATTTTAGGCGGCAATGGTGTGGGGCCCTGGC---CA-GCCGATAGTCCGCCGCGCCGC--GAAT------G--------------TTATCGATAGA----CG--------------------------------------------------------------AGC----CCTAACCATTTGTT-----GTTTGTTTT----------CCTTTTG---------------------------TTG--CAGTTTTC--ATGTCTA-------------------------TATAAACAAACGTAC--AG---CGAAAGTCGGTTAAAAAATCA
droEre2 scaffold_4820:4944751-4944996 + GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCT----------------C-GG--TG-----------------------TGTGTGTG--------------------TGCGTCAGTGTGC-------CTGTACGTG--------TGTGTGTACACATTTTAGGCGGCAATGGTGTGGGGCCCTGGC---CA-GCCGATAGTCCGCCGCGCCGC--GCT-------G--------------TAATCGATAGG----CG--------------------------------------------------------------AGC-----CTAACCATTTGTT-----GTTTGTTTT----------CCTTTTG---------------------------TTG--CAGTTTTC--ATGTCTA-------------------------TATAAACAAACGCAC--AG---CGAAAGTCGGTTAAAAAATCA
droYak3 3R:23404321-23404567 + GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCT----------------C-GG--TG-----------------------TGTGTGTG--------------------TGCGTCGGTGTGC-------CTGTGCGTG--------TGTGTGTACACATTTTAGGCGGCAATGGTGTGGGGCCCTGGC---CA-GCCGATAGTCCGCCGCGCCGC--AATT------G--------------TTATCGATAGG----CG--------------------------------------------------------------GGC----AATAACCATTTGTT-----GTTTGTTTT----------CCTTTTG---------------------------TTG--CAGTTTTC--ATGTCTA-------------------------TATAAACAAACGCAC--AG---CGAAAATCGGTTAAAAA-TCA
droEug1 scf7180000409770:558345-558591 - GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCC-------------------G--TG-----------------------TGTTTGTG--------------------TGCGTCGGTGCGC-------CTGTGCGTG--------TGTGTGTACACAT-TTAGGCGGCAATGGTGTGAGGCCCTGGC---CA-GCCGATAGTCCGCCGCGCAGT--GATA------G--------------TTATCGATAGG----CG--------------------------------------------------------------TGC----CCTAACCATTTGTT-----GTTTGTTTT----------T-TTCTG-----------------------TTTTCTG--TAGTTTTC--ATGTCTA-------------------------TATAAACAAGCGCAC--AG---CAAGAATCGGTTTACAA-ACA
droBia1 scf7180000302075:1861396-1861672 + GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCC----------------CCCGTG----TGCG-----------------TGTGTGTG--------------------TGCGTCGGTGTGC--------TGTGCGTGTGTG----TGTGTGTACACATTTTAGGCGGCAAGGGTGTGAGGCCCTGGC---CA-GCCGATAGTCCGC-GCGCAGC--GATG------G--------------TTATCGATAGT----CG-----------CGA------------------------------------------------TGC----ACTAACCATTTGTT-----GTTTGTTTTTTTC------CCT-------------CTTCCCTTTTTGTGTT-TTTG--CAGACTTCTTATGTCTA-------------------------TATAAACAAGCGCAC--AG---CGAGATTCGGTTAAGAAACAG
droTak1 scf7180000415700:465089-465358 - GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCC----------------C-AGTG----TGTG------------TGTGT---TTGTA--------------------TGCGTCGGTGTGC----C--CTGTGCGTG--TG----TGTGTGTA-AAATTTTAGGCGGCAATGGTGTGAGGCCCTGGC---CA-GCCGATAGTCCGCCGCACGG-GCGATA------G--------------TTATCGATAACGGGACG-------------A------------------------------------------------TGC----ACTAA---TTTG--------TTTGTTTTTTTCGCCTTTCGTTTTG-----------------------T--CTTG--CAGTTTTCATATGTCTA-------------------------TATAAACAAGCGCAA--AA---CGAGATTTGGTTAGGAAAAAT
droEle1 scf7180000491261:1559532-1559773 - GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCC----------------C--C--TG-----------------------TGTTTGTG--------------------TGCGTCGGTGAGC-------CTGTGCGTG--------TGTGTGTACACATTTTAGGCGGCAATGGTGTGAGGCCCTGGC---CA-GCCGATAGTCCGCC-CGCAGC--GATA------G--------------CTATCGATAGT----TG----------GCGAATTCG-------------------------------------------CT-----ACTAACCATTTGTT-----GTTTGTTTT----------C----------------------------------TG--CAGT--TC--ATGTCTA-------------------------TATAAACAAGCGCAC--AA-CGCTAGCATCGGTTAA-----CA
droRho1 scf7180000780007:56820-57059 + GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCC----------------C--C--TG-----------------------TGTTTGTG--------------------TGCGTCGGTGAGC-------CTGTGCGTG--------TGTGTGTACACATTTTAGGCGGCAATGGTGTGAGGCCCTGGC---CA-GCCGATAGTCCGCC-CACGGC--GACT------G--------------TTATCGATAGT----TG----------GCG-------------------------------------------------AA-----ACTAACTATTTGTT-----GTTTATTTT----------C----------------------------------TG--CAGT--TC--ATGTCTA-------------------------TATAAACAAGCGCAC--AA-CACGAGCATCGGTTAACAA-TCA
droFic1 scf7180000453826:625906-626144 + GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTT-GGCC----------------C--G--TG-----------------------TGTTTGTG--------------------TGCGTCGGTGAAC-------CTGTGAATG--------TGTGTGTACACAT-TTAGGCGGCAATGGTGTGAGGCCCTGGC---CA-GCCGATAGTCCAC-GCGCAGC--GATA------T--------------TTATCGATAGA----TG-------------T------------------------------------------------TGT----CCTAACCATTTGTT-----GTTTGTTTT----------CCT-------------------------------CTG--CAGTTTTC--ATGTT-----------------------------TAAACAACCGCAA--AT-CTCGAGCATCGGTTAAAAA-GCA
droKik1 scf7180000302705:145308-145557 - GCGGCGCATGTTTTGTTTTTTCGTGCACTGTACACCACAGTGGA-------------GCG----------------CCCGTGTG-----------------------TGCCTGTG--------------------TGCGTCGGTGGGC-------CTGTGCATG--------TGTGTGTACACATTTTAGGCGGCAATGGTGTGAGGCCCTGGC---CA-GCCGATAGCGCGCTAGCCAGC-CGATA------G--------------TTATCGAAATG----CG--------------------------------------------------------------CGC----ACTAACAATTTGTT-TGTTGTTTGTTTT----------C-----T---------------------------TTG--CAGT--TC--ATGTCTA-------------------------TATAAACAGGCGAAC--AA---CGACCGTC---T-AGAA-CTA
droAna3 scaffold_13340:19603011-19603256 + GCGGCGCATGTTTTGTTTTTTCGTGCACTGTACACCACAGTGGAGTACTGCCGTGTGGCT-------------------G--TG-----------------------TGTGTGTGTG------------ACCGTGT-CGTCGGTGTAA-------CTGTGCATG--------TGTGTGTACCCATTTTAGGCGGCAATGGTGTGAGGCCCTGGT--------CGATAGTT-GCC------------------CA--------------CTATCGATAAC----CG--------------------------------------------------------------CAA-----CTTAC-CTTTGTT-----GTTTGTTTT----------C---------------------------------TTG--CAGT--TG--ATGTCTA-------------------------TATAAACAATCGCCT--TGATCTGATCATTGGTAAGCA----A
droBip1 scf7180000396413:2782856-2783097 - GCGGCGCATGTTTTGTTTTTTCGTGCACTGTACACCACAGTGGAGTACTGCCGTGTGGCT-------------------G--TG-----------------------TGTGTG----------------ACCGTGTGCGTCGGTGTGC-------CTGTGCATG--------TGTGTGTACACATTTTAGGCGGCAATGGTGTGGGGCCCTGGT--------CGATAGTC-GCC------------------CG--------------CTATCGATATC----CG--------------------------------------------------------------CC-----ACTTAC-CTTTGTT-----GTTTGTTTT----------C---------------------------------TTG--CAGT--TG--TTGTCTA-------------------------TATAAACAAGCGCCT--TGGTTTGAGCATCGGT----AA-GCA
dp5 2:9710764-9710993 + GTGGCGCATGTTTTGTTTTTTCGTGCACTGTACACCAGTGTGTA----------------------------------------------------------------------------------------------GTCAGTGCGTTTTGCATTTGTGTGTG--------TGTGTGTACACATTTTAGGCGGTAATGGTGTGAGGCCCTGGCCGCCA-GCCGATA----------CCGC--GATAACTATCG--------------CTATCGATAAG----AG--------------------------------------------------------------CAC----GCTAAC-GTTTGT------------TTT----------GTTTTTC---------------------------TTG--CAGT--TC--ATGTCGA-------------------------TATAAGGAAGCGCACACAG---CATTTGTCCATTGA--A-TAA
droPer2 scaffold_0:10770062-10770291 - GTGGCGCATGTTTTGTTTTTTCGTGCACTGTACACCAGTGTGTA----------------------------------------------------------------------------------------------GTCAGTGCGTTTTGCATTTGTGTGTG--------TGTGTGTACACATTTTAGGCGGTAATGGTGTGAGGCCCTGGCCGCCA-GCCGATA----------CCGC--GATAACTATCG--------------CTATCGATAAG----AG--------------------------------------------------------------CAC----GCTAAC-GTTTGT------------TTT----------GTTTTTC---------------------------TTG--CAGT--TC--ATGTCGA-------------------------TATAAGGAAGCGCACGCAG---CATTTGTCCATTGA--A-TAA
droWil2 scf2_1100000004921:348013-348418 + TTGGCGCATGTTTTGTTTTTTCGTTCACTGTAC------------------CATG-GTGCAGGTACAGTGTGGCCAA--C--TGTGTGCGTGTGCGTATGTG-----TGTGTGTGTGAATGTGTGTGTGAATGTGTGTGCTCATGTGC-------CTGTGTTGG--TGAGAGTGTGTGTACACATTTTAGGCGGCAATGGTATGAGGCCCTGGC---AA-TGC--------TT--------TCGAA--------------CT---TCCT------TAG-----CGTGCGACAGCGGCGCTTTCGAACTTCCTCGCGGCTCGACTGCGGCGGGATGGAAAACATAAACAGCCCCCGATAAACCTTTGTTGTGATATTTGTTTT----------AAATTTGCTAATGCATCTCCCCCGTTT-TTTA-CTCGCCCAGT--TC--ATGTCTAGGAGGAGAGGGAAGGACAAACAAAACGCAAACAAACGCAC--AA-------AGTCTACCCAAAACTTA
droVir3 scaffold_13047:7927292-7927454 - GTGGCGCATGTTTTGTTTTCTTGTGCACTGTACACCACA--------------------T----------------C-ACTA----TGCT------------TGTGT---T-TTA--------------------TAT--GTGTGTGT-------CTGTGTTAG--TG----ACTTTGTACACATTTTAGGCGGT-GTGGTGTGAGGCCCTCGC---AG---------TGCGC--------TCGATAATTATCGCTGCCATT---TGCTTATCGATAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:28263516-28263636 + GTGGCGCATGTTCTGTTTTCTTGTGCACTGTACACCACA--------------------T----------------C-ATTA----TGCT------------TGTGT----TGTG--------------------TGT--GTGTGTGT-------CTGTGTTAG--TG----ACTTTGTACACATTTTAGGCGGT-GTGGTGTGAGACCCTCGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15074:1693578-1693745 + GGGGCGCATGTTTTGTTTTCTTGTGCACTGTACAC----------------CATC-ACAT----------------C-AGTA----TGCT------------TGTGT---T-------------------------GTGTATGCATGT-------CTGTGTTGG--TGA--CTTTTTGTACACATTTTAGGCGGT-GTGGTGTGAGGCCCTCGC---ACAGT---------GT--------TCGATAATTATCGTTGCTGTTGCATGTCTATCGATAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCT----------------C-GGTGTG-----------------------TGTTTGTG--------------------TGCGTCGGTGTGC-------CTGTGCGTG--------TGTGTGTACACATTTTAGGCGGCAATGGTGTGGGGCCCTGGC---CA-GCCGATAGTCCGCCGCGCCGC--GAAT------G--------------TTATCGATAGA----AG--------------------------------------------------------------AGC----CCTAACCATTTGTT-----GTTTGTTTT----------CCTATTG---------------------------TTG--CAGTTTTC--ATGTCTA-------------------------TATAAACAAACGCAT--AG---CGAAAGTCGGTTAAAAAATCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................TTCGTGCACTGTAC------------------CGTG-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGCAT--AG---CGAAAGTC.............1811.00100000000001000000
................................................................................TGTG-----------------------TGTTTGTG--------------------TGCGTCGGTG...................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
.................................................................................GTG-----------------------TGTTTGTG--------------------TGCGTCGGT....................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
...............TTTTTTCGTGCACTGTAC------------------CGTG-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000001000000000
..............................................................................................................TTGTG--------------------TGCGTCGGTGTGC-------CC.......................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
................................................................................TGTG-----------------------TGTTTGTG--------------------TGCGTCGG.....................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000010000000
................................................................................TGTG-----------------------TGTTTGTG--------------------TGCGTCGGTA...................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGTCGGTTAAAAA....1620.50100000010000000000
..................................................................................................................................................GC-------CTGTGCGTG--------TGTGTG..................................................................................................................................................................................................................................................................................................................................................1780.13100000000001000000
droSec2
GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCT----------------C-GGTGTG-----------------------TGTTTGTG--------------------TGCGTCGGTGTGC-------CTGTGCGTG--------TGTGTGTACACATTTTAGGCGGCAATGGTGTGGGGCCCTGGC---CA-GCCGATAGTCCGCCGCGCCGC--GAAT------G--------------TTATCGATAGA----AG--------------------------------------------------------------AGC----CCTAACCATTTGTT-----GTTTGTTTT----------CCTTTTG---------------------------TTG--CAGTTTTC--ATGTCTA-------------------------TATAAACAAACGCAT--AG---CGAAAGTCGGTTAAAAAATCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................TGTG-----------------------TGTTTGTG--------------------TGCGTCGG.....................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
................................................................................TGTG-----------------------TGTTTGTG--------------------TGCGTCGGTG...................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
......................................................................................................................................................................................................................................CGCCGCGCCGC--GAAT------G--------------TTATCGATAG..............................................................................................................................................................................................................................................2611.0010010
................................................................................TGTG-----------------------TGTTTGTG--------------------TGCGTCGGT....................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
.......................TGCACTGTAC------------------CGTG-GGCT----------------C-GG....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
..............................................................................................................TTGTG--------------------TGCGTCGGTGTGC-------.........................................................................................................................................................................................................................................................................................................................................................................1820.5010001
dm3
GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCT----------------C-AGTGTG-----------------------TGTGTGTG--------------------TGCGTCGGTGTGC-------CTGTGCGTG--------TGTGTGTACACATTTTAGGCGGCAATGGTGTGGGGCCCTGGC---CA-GCCGATAGTCCGCCGCGCCGC--GAAT------G--------------TTATCGATAGA----CG--------------------------------------------------------------AGC----CCTAACCATTTGTT-----GTTTGTTTT----------CCTTTTG---------------------------TTG--CAGTTTTC--ATGTCTA-------------------------TATAAACAAACGTAC--AG---CGAAAGTCGGTTAAAAAATCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGTAC--AG---CGAAAGTCGGTT.........2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTAC--AG---CGAAAGTCGGTTAAA......2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ACTGTAC------------------CGTG-GGCT----------------C-AG....................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TTATCGATAGA----CG--------------------------------------------------------------AGC----CCTAACCAT.........................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TGTG-----------------------TGTGTGTG--------------------TGCGTCGGTG...................................................................................................................................................................................................................................................................................................................................................................................2222.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000002000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CGTCGGTGTGC-------CTGTGCGTG--------TGTGTG..................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000
.....................................................TG-GGCT----------------C-AGTGTG-----------------------TGTGTGTG--------------------.............................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000
........TGTTTTGTTTTTTCGTGCACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................G-GGCT----------------C-AGTGTG-----------------------TGTGTG...................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TTGTTTT----------CCTTTTG---------------------------TTG--CAG..................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACAAACGTAC--AG---CGAAAGT..............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................................TG-----------------------TGTGTGTG--------------------TGCGTCGGTGT..................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...........................................................................................................TGTGTGTG--------------------TGCGTCGGTGTGC-------.........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
....................................................GTG-GGCT----------------C-AGTGTG-----------------------TGTGTGTG--------------------TG...........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---CGAAAGTCGGTTAAAAAATC.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................GTGGGGCCCTGGC---CA-GCCGATAGT...............................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................ACATTTTAGGCGGCAATG.............................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........................................................................................................................................GTCGGTGTGC-------CTGTGCGTG--------........................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CAATGGTGTGGGGCCCTGGC---CA-........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-------------------------TATAAACAAACGTAC--AG---CGAA.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................C-------CTGTGCGTG--------TGTGTGTACAC.............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................ATGGTGTGGGGCCCTGGC---CA-GCC.....................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................................GCAATGGTGTGGGGCCCTG................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
................TTTTTCGTGCACTGTAC------------------CGTG-GG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAC--AG---CGAAAGTCGGTTAA.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TGTAC------------------CGTG-GGCT----------------C-AGTGTG-----------------------TG.......................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TTGTT-----GTTTGTTTT----------CCTTTTG---------------------------TTG--CAG..................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.................................................................................................................TG--------------------TGCGTCGGTGTGC-------CTG......................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
......................GTGCACTGTAC------------------CGTG-GGCT----------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..............................TAC------------------CGTG-GGCT----------------C-AGTGTG-----------------------TGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.................................................................................GTG-----------------------TGTGTGTG--------------------TGCGTCGGTGTG.................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................G--------------------------------------------------------------AGC----CCTAACCATTTGTT-----GT.............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...............................AC------------------CGTG-GGCT----------------C-AGTGTG-----------------------T........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TGTT-----GTTTGTTTT----------CCTTTTG---------------------------TTG--CAG..................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CGTGCACTGTAC------------------CGTG-GGCT----------------C-......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTTCGTGCACTGTAC------------------CGTG-GG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....GCATGTTTTGTTTTTTCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................ATCGATAGA----CG--------------------------------------------------------------AGC----CCTAACCATT........................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................................................GTG-GGCT----------------C-AGTGTG-----------------------TGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTAC--AG---CGAAAGTCG............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGTAC--AG---CGAAAGTCGG...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................GTG-----------------------TGTGTGTG--------------------TGCGTCGGTGT..................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................TGTG--------------------TGCGTCGGTGTGC-------CTGT.....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAGTCGGTTAAAAAATC.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................C------------------CGTG-GGCT----------------C-AGTGTG-----------------------TGTGTG...................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................GCCGC--GAAT------G--------------TTATCGATAGA----CG--------------------------------------------------------------AG.......................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
................................................................................TGTG-----------------------TGTGTGTG--------------------TGCGTCGG.....................................................................................................................................................................................................................................................................................................................................................................................2050.8040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000000100000010000000
.........................................................GCT----------------C-AGTGTG-----------------------TGTGTGTG--------------------.............................................................................................................................................................................................................................................................................................................................................................................................1860.6740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000001000000000000000000000000001000000000000000
..................................................................................................................................................GC-------CTGTGCGTG--------TGTGTGT.................................................................................................................................................................................................................................................................................................................................................1850.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000
...........................................................T----------------C-AGTGTG-----------------------TGTGTGTG--------------------TGCGT........................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TG-----------------------TGTGTGTG--------------------TGCGTCGGT....................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
............................................................................................................GTGTGTG--------------------TGCGTCGGTGT..................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................GTG-----------------------TGTGTGTG--------------------TGCGTCGGT....................................................................................................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................T----------------C-AGTGTG-----------------------TGTGTGTG--------------------TGC..........................................................................................................................................................................................................................................................................................................................................................................................19110.2730000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000000000
................................................................................TGTG-----------------------TGTGTGTG--------------------TGCGTCG......................................................................................................................................................................................................................................................................................................................................................................................1980.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001000
...............................................................................GTGTG-----------------------TGTGTGTG--------------------TGCGTCG......................................................................................................................................................................................................................................................................................................................................................................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...........................................................T----------------C-AGTGTG-----------------------TGTGTGTG--------------------TGCG.........................................................................................................................................................................................................................................................................................................................................................................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............................................................................C-AGTGTG-----------------------TGTGTGTG--------------------TGC..........................................................................................................................................................................................................................................................................................................................................................................................18160.1930000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................................................GC-------CTGTGCGTG--------TGTGTG..................................................................................................................................................................................................................................................................................................................................................1770.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................AGTGTG-----------------------TGTGTGTG--------------------TGCGT........................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
droEre2
GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCT----------------C-GG--TG-----------------------TGTGTGTG--------------------TGCGTCAGTGTGC-------CTGTACGTG--------TGTGTGTACACATTTTAGGCGGCAATGGTGTGGGGCCCTGGC---CA-GCCGATAGTCCGCCGCGCCGC--GCT-------G--------------TAATCGATAGG----CG--------------------------------------------------------------AGC-----CTAACCATTTGTT-----GTTTGTTTT----------CCTTTTG---------------------------TTG--CAGTTTTC--ATGTCTA-------------------------TATAAACAAACGCAC--AG---CGAAAGTCGGTTAAAAAATCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCT----------------C-GG--TG-----------------------TGTGTGTG--------------------TGCGTCGGTGTGC-------CTGTGCGTG--------TGTGTGTACACATTTTAGGCGGCAATGGTGTGGGGCCCTGGC---CA-GCCGATAGTCCGCCGCGCCGC--AATT------G--------------TTATCGATAGG----CG--------------------------------------------------------------GGC----AATAACCATTTGTT-----GTTTGTTTT----------CCTTTTG---------------------------TTG--CAGTTTTC--ATGTCTA-------------------------TATAAACAAACGCAC--AG---CGAAAATCGGTTAAAAA-TCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................GTGCACTGTAC------------------CGTG-GGCT----------------C-......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
........................................................................................................................................................................................................................................................................................................................................................................................................CCTTTTG---------------------------TTG--CAGTTTTC--ATGTC......................................................................2311.00100010000000
.....................CGTGCACTGTAC------------------CGTG-GGCT----------------C-......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000
...............................................................................................................................................................................................CGGCAATGGTGTGGGGCC...................................................................................................................................................................................................................................................................................................................1811.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAC--AG---CGAAAATCGGTTA........2211.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAAACAAACGCAC--AG---CGAAAATCGGT..........2811.00100000010000
droEug1
GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCC-------------------G--TG-----------------------TGTTTGTG--------------------TGCGTCGGTGCGC-------CTGTGCGTG--------TGTGTGTACACAT-TTAGGCGGCAATGGTGTGAGGCCCTGGC---CA-GCCGATAGTCCGCCGCGCAGT--GATA------G--------------TTATCGATAGG----CG--------------------------------------------------------------TGC----CCTAACCATTTGTT-----GTTTGTTTT----------T-TTCTG-----------------------TTTTCTG--TAGTTTTC--ATGTCTA-------------------------TATAAACAAGCGCAC--AG---CAAGAATCGGTTTACAA-ACASizeHit CountTotal NormTotal
No Reads
droBia1
GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCC----------------CCCGTG----TGCG-----------------TGTGTGTG--------------------TGCGTCGGTGTGC--------TGTGCGTGTGTG----TGTGTGTACACATTTTAGGCGGCAAGGGTGTGAGGCCCTGGC---CA-GCCGATAGTCCGC-GCGCAGC--GATG------G--------------TTATCGATAGT----CG-----------CGA------------------------------------------------TGC----ACTAACCATTTGTT-----GTTTGTTTTTTTC------CCT-------------CTTCCCTTTTTGTGTT-TTTG--CAGACTTCTTATGTCTA-------------------------TATAAACAAGCGCAC--AG---CGAGATTCGGTTAAGAAACAGSizeHit CountTotal NormTotal
No Reads
droTak1
GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCC----------------C-AGTG----TGTG------------TGTGT---TTGTA--------------------TGCGTCGGTGTGC----C--CTGTGCGTG--TG----TGTGTGTA-AAATTTTAGGCGGCAATGGTGTGAGGCCCTGGC---CA-GCCGATAGTCCGCCGCACGG-GCGATA------G--------------TTATCGATAACGGGACG-------------A------------------------------------------------TGC----ACTAA---TTTG--------TTTGTTTTTTTCGCCTTTCGTTTTG-----------------------T--CTTG--CAGTTTTCATATGTCTA-------------------------TATAAACAAGCGCAA--AA---CGAGATTTGGTTAGGAAAAATSizeHit CountTotal NormTotal
No Reads
droEle1
GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCC----------------C--C--TG-----------------------TGTTTGTG--------------------TGCGTCGGTGAGC-------CTGTGCGTG--------TGTGTGTACACATTTTAGGCGGCAATGGTGTGAGGCCCTGGC---CA-GCCGATAGTCCGCC-CGCAGC--GATA------G--------------CTATCGATAGT----TG----------GCGAATTCG-------------------------------------------CT-----ACTAACCATTTGTT-----GTTTGTTTT----------C----------------------------------TG--CAGT--TC--ATGTCTA-------------------------TATAAACAAGCGCAC--AA-CGCTAGCATCGGTTAA-----CASizeHit CountTotal NormTotal
No Reads
droRho1
GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTG-GGCC----------------C--C--TG-----------------------TGTTTGTG--------------------TGCGTCGGTGAGC-------CTGTGCGTG--------TGTGTGTACACATTTTAGGCGGCAATGGTGTGAGGCCCTGGC---CA-GCCGATAGTCCGCC-CACGGC--GACT------G--------------TTATCGATAGT----TG----------GCG-------------------------------------------------AA-----ACTAACTATTTGTT-----GTTTATTTT----------C----------------------------------TG--CAGT--TC--ATGTCTA-------------------------TATAAACAAGCGCAC--AA-CACGAGCATCGGTTAACAA-TCASizeHit CountTotal NormTotal
No Reads
droFic1
GAGGCGCATGTTTTGTTTTTTCGTGCACTGTAC------------------CGTT-GGCC----------------C--G--TG-----------------------TGTTTGTG--------------------TGCGTCGGTGAAC-------CTGTGAATG--------TGTGTGTACACAT-TTAGGCGGCAATGGTGTGAGGCCCTGGC---CA-GCCGATAGTCCAC-GCGCAGC--GATA------T--------------TTATCGATAGA----TG-------------T------------------------------------------------TGT----CCTAACCATTTGTT-----GTTTGTTTT----------CCT-------------------------------CTG--CAGTTTTC--ATGTT-----------------------------TAAACAACCGCAA--AT-CTCGAGCATCGGTTAAAAA-GCASizeHit CountTotal NormTotal
No Reads
droKik1
GCGGCGCATGTTTTGTTTTTTCGTGCACTGTACACCACAGTGGA-------------GCG----------------CCCGTGTG-----------------------TGCCTGTG--------------------TGCGTCGGTGGGC-------CTGTGCATG--------TGTGTGTACACATTTTAGGCGGCAATGGTGTGAGGCCCTGGC---CA-GCCGATAGCGCGCTAGCCAGC-CGATA------G--------------TTATCGAAATG----CG--------------------------------------------------------------CGC----ACTAACAATTTGTT-TGTTGTTTGTTTT----------C-----T---------------------------TTG--CAGT--TC--ATGTCTA-------------------------TATAAACAGGCGAAC--AA---CGACCGTC---T-AGAA-CTASizeHit CountTotal NormTotal
No Reads
droAna3
GCGGCGCATGTTTTGTTTTTTCGTGCACTGTACACCACAGTGGAGTACTGCCGTGTGGCT-------------------G--TG-----------------------TGTGTGTGTG------------ACCGTGT-CGTCGGTGTAA-------CTGTGCATG--------TGTGTGTACCCATTTTAGGCGGCAATGGTGTGAGGCCCTGGT--------CGATAGTT-GCC------------------CA--------------CTATCGATAAC----CG--------------------------------------------------------------CAA-----CTTAC-CTTTGTT-----GTTTGTTTT----------C---------------------------------TTG--CAGT--TG--ATGTCTA-------------------------TATAAACAATCGCCT--TGATCTGATCATTGGTAAGCA----ASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATCGCCT--TGATCTGATC................2011.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATCGCCT--TGATCTGATCATT.............2411.001010000
..................................................................................................................................................................................................................................AGTT-GCC------------------CA--------------CTATCGATAAC----CG--------------------------------------------------------------C........................................................................................................................................................................2311.001001000
.....................................................TGTGGCT-------------------G--TG-----------------------TGTGTGTGT................................................................................................................................................................................................................................................................................................................................................................................................................19150.071010000
droBip1
GCGGCGCATGTTTTGTTTTTTCGTGCACTGTACACCACAGTGGAGTACTGCCGTGTGGCT-------------------G--TG-----------------------TGTGTG----------------ACCGTGTGCGTCGGTGTGC-------CTGTGCATG--------TGTGTGTACACATTTTAGGCGGCAATGGTGTGGGGCCCTGGT--------CGATAGTC-GCC------------------CG--------------CTATCGATATC----CG--------------------------------------------------------------CC-----ACTTAC-CTTTGTT-----GTTTGTTTT----------C---------------------------------TTG--CAGT--TG--TTGTCTA-------------------------TATAAACAAGCGCCT--TGGTTTGAGCATCGGT----AA-GCASizeHit CountTotal NormTotal
No Reads
dp5
GTGGCGCATGTTTTGTTTTTTCGTGCACTGTACACCAGTGTGTA----------------------------------------------------------------------------------------------GTCAGTGCGTTTTGCATTTGTGTGTG--------TGTGTGTACACATTTTAGGCGGTAATGGTGTGAGGCCCTGGCCGCCA-GCCGATA----------CCGC--GATAACTATCG--------------CTATCGATAAG----AG--------------------------------------------------------------CAC----GCTAAC-GTTTGT------------TTT----------GTTTTTC---------------------------TTG--CAGT--TC--ATGTCGA-------------------------TATAAGGAAGCGCACACAG---CATTTGTCCATTGA--A-TAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCACACAG---CATTTGTCCATTGA--A-...2511.0010001000000
droPer2
GTGGCGCATGTTTTGTTTTTTCGTGCACTGTACACCAGTGTGTA----------------------------------------------------------------------------------------------GTCAGTGCGTTTTGCATTTGTGTGTG--------TGTGTGTACACATTTTAGGCGGTAATGGTGTGAGGCCCTGGCCGCCA-GCCGATA----------CCGC--GATAACTATCG--------------CTATCGATAAG----AG--------------------------------------------------------------CAC----GCTAAC-GTTTGT------------TTT----------GTTTTTC---------------------------TTG--CAGT--TC--ATGTCGA-------------------------TATAAGGAAGCGCACGCAG---CATTTGTCCATTGA--A-TAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................C--ATGTCGA-------------------------TATAAGGAAGC................................1911.001100000
droWil2
TTGGCGCATGTTTTGTTTTTTCGTTCACTGTAC------------------CATG-GTGCAGGTACAGTGTGGCCAA--C--TGTGTGCGTGTGCGTATGTG-----TGTGTGTGTGAATGTGTGTGTGAATGTGTGTGCTCATGTGC-------CTGTGTTGG--TGAGAGTGTGTGTACACATTTTAGGCGGCAATGGTATGAGGCCCTGGC---AA-TGC--------TT--------TCGAA--------------CT---TCCT------TAG-----CGTGCGACAGCGGCGCTTTCGAACTTCCTCGCGGCTCGACTGCGGCGGGATGGAAAACATAAACAGCCCCCGATAAACCTTTGTTGTGATATTTGTTTT----------AAATTTGCTAATGCATCTCCCCCGTTT-TTTA-CTCGCCCAGT--TC--ATGTCTAGGAGGAGAGGGAAGGACAAACAAAACGCAAACAAACGCAC--AA-------AGTCTACCCAAAACTTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTAGGAGGAGAGGGAAGGA....................................................2111.00100100
.............................................................................................................................................CATGTGC-------CTGTGTTGG--TGAG..........................................................................................................................................................................................................................................................................................................................................................2011.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGCAAACAAACGCAC--AA-------AGT..............2311.00100100
droVir3
GTGGCGCATGTTTTGTTTTCTTGTGCACTGTACACCACA--------------------T----------------C-ACTA----TGCT------------TGTGT---T-TTA--------------------TAT--GTGTGTGT-------CTGTGTTAG--TG----ACTTTGTACACATTTTAGGCGGT-GTGGTGTGAGGCCCTCGC---AG---------TGCGC--------TCGATAATTATCGCTGCCATT---TGCTTATCGATAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................TA----TGCT------------TGTGT---T-TTA--------------------TAT--GTGTG...................................................................................................................................................................................................................................................................................................................................................................................2311.001000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................TCGC---AG---------TGCGC--------TCGATAATTATCGCT....................................................................................................................................................................................................................................................................2611.001000000000000000000000000100000000000000000000000000000000000000
.................................................................................A----TGCT------------TGTGT---T-TTA--------------------TAT--GTGTG...................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
GTGGCGCATGTTTTGTTTTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
............TTGTTTTCTTGTGCACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501010000000000000000000000000000000000000000000000000000000000000
droMoj3
GTGGCGCATGTTCTGTTTTCTTGTGCACTGTACACCACA--------------------T----------------C-ATTA----TGCT------------TGTGT----TGTG--------------------TGT--GTGTGTGT-------CTGTGTTAG--TG----ACTTTGTACACATTTTAGGCGGT-GTGGTGTGAGACCCTCGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GGGGCGCATGTTTTGTTTTCTTGTGCACTGTACAC----------------CATC-ACAT----------------C-AGTA----TGCT------------TGTGT---T-------------------------GTGTATGCATGT-------CTGTGTTGG--TGA--CTTTTTGTACACATTTTAGGCGGT-GTGGTGTGAGGCCCTCGC---ACAGT---------GT--------TCGATAATTATCGTTGCTGTTGCATGTCTATCGATAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 05:21 PM