ID:

dsi_23982

 Coordinate:

3r:15759159-15759308 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.9 -14.9 -14.8

Flybase annnotation

CDS [3r_15759309_15760029_-]; exon [3r_15759309_15760029_-]; intron [3r_15755986_15759308_-]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey-

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ACAGCAACTGCAGCTGGGCAACTATAAGACTAACTCCTGCTGGTGTTACGGTGAGTCTGATTAAGAACAAACAAACAAACGCAATCAGCATCAGCATAGAACTATCAAATCAAAAGTTGCGCACAACTTCCTCTACTACACCATACATAAAATGTACACCACTTCTCTATATAACTATCTATAACTATCGAGCTCGCTACAACCAACAAATCTCAACCAACCAGCCAACAACAGCATCAATCACCACGTC
**************************************************((((((.((((..........................((....))..................((((((....))))))..............(((((...))))).............((((......))))...)))).)))))).**************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 M023
head
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
..........................AGACTAACTCCTGCTGGG.............................................................................................................................................................................................................. 18 1 1 1.00 1 1 0 0 0 0 0 0 0
..................CAACTATAAGACTAACTCCTGC.................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................GTGAGTCTGATTAAGAACAAAC.................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................TATAACTATCGAGCTCGCT.................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................AAGAACAAACAAACAAAC.......................................................................................................................................................................... 18 0 2 1.00 2 0 0 0 2 0 0 0 0
................................................................................................................................................................................................CTCGCTACAACCAACAAATCTC.................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0
....................ACTATAAGACTAACTCCTGCT................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................AAGACTAACTACTGC.................................................................................................................................................................................................................. 15 1 10 0.20 2 0 0 0 0 2 0 0 0
...........................................TGTTACGGTCAGTCT................................................................................................................................................................................................ 15 1 6 0.17 1 0 0 0 0 0 1 0 0
.........................AAGACTAACTTCTGC.................................................................................................................................................................................................................. 15 1 11 0.09 1 0 0 0 0 0 0 1 0
...............................................................................................................................TTCCTCTAGTCCACCA........................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

TGTCGTTGACGTCGACCCGTTGATATTCTGATTGAGGACGACCACAATGCCACTCAGACTAATTCTTGTTTGTTTGTTTGCGTTAGTCGTAGTCGTATCTTGATAGTTTAGTTTTCAACGCGTGTTGAAGGAGATGATGTGGTATGTATTTTACATGTGGTGAAGAGATATATTGATAGATATTGATAGCTCGAGCGATGTTGGTTGTTTAGAGTTGGTTGGTCGGTTGTTGTCGTAGTTAGTGGTGCAG
****************************************************((((((.((((..........................((....))..................((((((....))))))..............(((((...))))).............((((......))))...)))).)))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 M025
embryo
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
............................................CAATGCCTCTCAGACTCAGTCT........................................................................................................................................................................................ 22 3 2 1.00 2 2 0 0 0 0 0
.....................................................................................................................ACGCGTATTGTAGGAGATG.................................................................................................................. 19 2 1 1.00 1 0 1 0 0 0 0
..........................................................................................................................TGTTGAAGGAGATGATACGGTA.......................................................................................................... 22 2 2 0.50 1 0 0 1 0 0 0
..............................................................................................................................GAAGGCGAGGATGTGGAATG........................................................................................................ 20 3 4 0.25 1 0 0 1 0 0 0
.........................................................................................................................................................................................................................GTTGGTCGGTGCTTGTAGTAG............ 21 3 6 0.17 1 0 0 1 0 0 0
.............................................................................................................AGTTTTGAACGAGTGTTG........................................................................................................................... 18 2 7 0.14 1 0 0 0 0 1 0
....................................................................................................................................................................................................................AGTTAGTTGGTTGGTTGTTGT................. 21 2 7 0.14 1 0 0 0 1 0 0
...........................................................................................................CTAGTTTTAAACGAGTGTTG........................................................................................................................... 20 3 10 0.10 1 1 0 0 0 0 0
.........................................................................................................................................................................................................................GTTGGTCGATTGGTGTCGG.............. 19 3 20 0.10 2 0 0 0 0 0 2
..........................TCTGATGGATGAAGACCAC............................................................................................................................................................................................................. 19 3 12 0.08 1 1 0 0 0 0 0
.................................................................................................................................GGACATGATGTGGTCT......................................................................................................... 16 2 18 0.06 1 1 0 0 0 0 0
.....................................................................TCGATTGTTTGCGTTAG.................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:15759109-15759358 - dsi_23982 ACAGCAACTGCAG-------------CTGGGC-AACTATAAGACTAACTCCTGCTGGTGTTACGGTGAGTCT----------------------------------GA-----------TTAAGAACAAACAAA-----------------------------------------------------------------------------C----AAACGCAAT------------CAGCA---TCAGCATAGA-ACTATCAA--ATCAAAAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-TATAT--------------------------------------------------------AACTA--TCTATAACTAT--CG--------AGC----TCGCTACA-----ACCAACAAA--------TCTCAACCAACCAG----------------------CC----AACAACAGCATCAATCACCACGTC
droSec2 scaffold_0:16628389-16628639 - ACAGCAACTGCAG-------------CTGGGC-AACTATAAGACTAACTCCTGCTGGTGTTACGGTGAGTCT----------------------------------GA-----------TCAAGAACAAACAAA-----------------------------------------------------------------------------C----AAACGCAAT------------CAGCA---TCAGCATAGA-ACTATCAA--ATCAAAAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-TATAT--------------------------------------------------------AACTA--TCTATAACTAT--CGG-------AGC----TCGCTACA-----ACCAACA-A--------TCTCAACCAA---------AGTAG------------CT----ACAAACAGCATCAATCACCACGTC
dm3 chr3R:5267338-5267591 + ACAGCAACTGCAG-------------CTGGGC-AACTATAAGACTAACTCCTGCTGGTGTTACGGTGAGTCT----------------------------------GA-----------TTAAGAACAAACAAA-----------------------------------------------------------------------------CAAACAAACGCAAT------------CAGCA---TCAGCATAGA-ACTATCAA--ATCAAAAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-TATAT--------------------------------------------------------AACTA--TCTATAACTAT--CG--------AGC----TCGCTACA-----GCCAACAAA--------TATCAACCAACCAG----------------------CC----AACAACAGCATCAATCACCACGTC
droEre2 scaffold_4770:16336294-16336545 - ACAGCAACTGCAG-------------CTGGGC-GGCTATAAGACTAACTCCTGCTGGTGTTACGGTGAGTCT----------------------------------GA-----------TTAAGAACAA----A-----------------------------------------------------------------------------C----AAACGCAAT------------CAACA---TCAGCATAGA-ACTATCAA--ATCAAAAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-T----AT--------------------------------------------------------CTATAACTATAACTAT--CG--------AGC----TCGCTACA-----ACCAACAAATATCAAAATATCAACCAACCAG----------------------CC----AACAACAGCATCAATCACCACGTC
droYak3 3R:9314973-9315210 + ACAGCAACTGCAG-------------CTGGGC-GGCTATAAGACAAACTCCTGCTGGTGTTACGGTGAGTCT----------------------------------GA-----------TTAAGAACAA----T-----------------------------------------------------------------------------C----AAACGCAAT------------CAACA---TCAGCATAGA-ACTATCAA--ATCAAAAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTTTC-T----AT--------------------------------------------------------------CTATAACTAT--CG--------AGC----TCGCTACA-----ACCAACAAA--------TATCAACCAACCAG----------------------CC----AACAACAGCATCAATCACCACGTC
droEug1 scf7180000407136:431768-432011 - ACAGCAACAGCAA--------C--TGCTGGGC-AACTATAAGACTAACTCCTGCTGGTGTTACGGTGAGTCT----------------------------------GA-----------TTAAGAACAA---------------------------------------------------------------------------------------AAACGCAAT------------CAACAACATCAGCATAGA-ACTATC-------AAAAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-T----AT------------------------------------------------------------CTATATAACTATCTCG--------AGC----TCGCTACAAACCAACCAACCAAC----------CAACCAACCAG----------------------CC----AACAACAGCATCAATCACCACGTC
droBia1 scf7180000302402:8003130-8003381 + CCA-------------------------------ACTTTAAGACTAACTCCTGCTGGTGTTACGGTGAGTCT----------------------------------GA-----------TTAAGAACCA----------------------------------------------------------------------------------C----AAACGCAAT------------CAACA---TCAGCATAGA-ACTATCAA--ACCAAAGGCTGCGCACAACCTCCTCT-CTACC----------ACACCATACAT-------AAAATGTACACC---TATC-T----AT--------------------------------------------------------CTATCTATATAACTAT--CG--------AGCTCTCTCGCTACA-----ACCAACCAAC----------CAACCAACCAACCAA-ATCAGCCAACCAACCAGCCAACCAACAACAGCATCAATCACCACGTC
droTak1 scf7180000415811:274400-274638 - ACAGCAACTGCAG-------------CTGGGC-AACTATAAGACTAACTCCTGCTGGTGTTACGGTGAGTCT----------------------------------GA---------TTTCAAGAAC------------------------------------------------------------------------------------C----AAATGCAAT------------CAACA---TCAGCATAGA-ACTATCAA--ATCAAAAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGAACACCACTTCTC-TATA--T------------------------------------------------------------CTATATAACTAT--CG--------AGC----TCGCTACA-----ACCAACCAAC----------CAACCAACCAG----------------------CC----AACAACAGCATCAATCACCACGTC
droEle1 scf7180000491194:438190-438420 + G-------------------------CTTGGA-AACTATAAGACTAACCCCTGCTGGTGTTACGGTGAGTCT--------------------------GAAT------------CAGAATCAAGAACA----------------------------------------------------------------------------------------AAACGCAAT------------CAACA---TCGGCATAGA-ACTAT------TCTAAAGTTGCGCACAACTTCCTCTACTACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-TATAT------------------------------------------------------------A--TCTATAACTAT--CG--------AGC----TCGCTACA-----ACCAACCAAC----------CAACCAACCAG----------------------CC----AACAACAGCATCAATCACCACGTC
droRho1 scf7180000779488:485747-485971 + ACAACAACTG----------------CTCGGC-AACTTTAAGACTAACTCCTGCTGGTGTTACGGTGAGTCT----------------------------------GA-----------TTAAGAACA----------------------------------------------------------------------------------------AAACGCAAT------------CAACA---TCAGCATAGA-ACTATC-------TAAAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-T----AT--------------------------------------------------------------CTATAACTAT--CG--------AGC----TCGCTACA-----ACCAACCAAC----------CAACCAACCAG----------------------CC----AACAACAGCATCAATCACCACGTC
droFic1 scf7180000454106:1922096-1922333 - GCAGCCA--GCTG-------------CTGGGC-AACTATAAGACTAACTCCTGCTGGTGTTACGGTGAGTCC--------------------------GAGTCT--GA-----------TTAAGAAC-----------------------------------------------------------------------------------------AAACGCAAT------------CAACA---TCAGCATAGA-ACTATCA--------AAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-T----AT--------------------------------------------------------------CTATAACTAT--CG--------AGC----TCGCTACA-----ACCAACCAAC----------CAACCAACCAGCCAAC----------CA--------ACCAACAACAGCATCAATCACCACGTC
droKik1 scf7180000302388:1818592-1818845 - C-----------G-------------CTGGGC-AACTATAAGACTGCCTCCTGCTGGTGTTACGGTGAGTCC----CC--------------------GAGTATATGCTCAAATCAAAATAAATAA-A----------------------------------------------------------------------------------------AAACGCAAT------------CAGCA---TCAGCATAAA-ACTATCA--------AAGTTGCGCACAACTTCCTC---TACTATATATATATACACCCTACAT-------AAAATGTACACCACTTCTC-TATA----------------------------------------------------------------TCTATAACTAT--CG--------AGC----TCGCTACA-----ACCAACCAAC----------CAACCAACCAATCAACAA----------------C----AGCAACAGCATCAATCACCACGTC
droAna3 scaffold_13340:4781287-4781546 - ACAGCAATTGTCGTTGGGCAATCATGCT-GGC-AACTATAAGACTGCCTCCTGTTGGTGTTACGGTGAGTTT----------------------------------GA---------GATTAAGAA------------------------------------------------------------------------------------AC----AA-GCAAAT------------CAGCA---TCAGCATAGA-ACTATCAA-----AAAAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-TATAT-------------------------------ATTATATATATATATATCT------------CTATATAACTAT--CG--------AGC----TCGCTACA-----ACCAACCAAC----------CAACAA----------------------------A----AGCAACAGCATCAATCACCACGTC
droBip1 scf7180000396359:408641-408907 + ACAGCATC----GTTGGGCAATCATGCT-GGC-AACTATAAGACTGCCTCCTGTTGGTGTTACGGTGAGTTT----------------------------------GA-----------TTAAGAA------------------------------------------------------------------------------------AC----A-AC-CAATCAGCATCAGAATCAGCA---TCAGCATAGA-ACTTTCAACTATCAAAAGTTGTGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-TATAT-------------------------------A---TATATATATATATGT------------CTATATAACTAT--CG--------AGC----TCGCTACA-----ACCAACCAAC----------CAACAA----------------------------C----AGCAACAGCATCAATCACCACGTC
dp5 2:3150850-3151145 - dps_327 GCAAGCATTGCCA-------------CTGGGC-AACTATAAGACTGCCTCCTGTTGGTGCTACGGTGAGTGT----------------------------------GA-----------C-----------------------------------------------------------------------------------CTAAGAAAC----A-AAGCAAT------------CAACATCAACAGCATTGAAACAATCAG-----AAAAGTTGCGCACAACTTCCTA---TACT----------ACACCCTACATACTCGTCAAAATGAACACCACTTCTCCT----ATCTATATATGATCGTCTATCAATCGTATATATTGTATATATATATGTACATATATAACTA---CTATAACTAT--CG--------AGCTACATCGCTACA-----ACAAACCAAC----------AAA-------------------------------C----AGCAACAGCATCAATCACCACGTC
droPer2 scaffold_7:1191208-1191502 + GCAAGCATTGCCA-------------CTGGGC-AACTATA-GACTGCCTCCTGTTGGTGCTACGGTGAGTGT----------------------------------GA-----------C-----------------------------------------------------------------------------------CTAAGAAAC----A-AAGCAAT------------CAACATCAACAGCATTGAAACAATCAG-----AAAAGTTGCGCACAACTTCCTA---TACT----------ACACCCTACATACTCGTCAAAATGAACACCACTTCTCCT----ATCTATATATGATCGTCTATCAATCGTATATATTGTATATATATATGTACATATATAACTA---CTATAACTAT--CG--------AGCTACATCGCTACA-----ACAAACCAAC----------AAA-------------------------------C----AGCAACAGCATCAATCACCACGTC
droWil2 scf2_1100000004515:3267098-3267354 - ACAACAACTACAA--------C----CACGAC-AACAACAACAACAACTACAACCACGACGACGACGACAAC----------------------------------AA------------CAACAACTTGCAAACCAACAACAACGACAACAACAACAACTTGCAAACCAACAACAACGACAACAACAACTACAACCACGACA--------------------------------------------------------------------ACAACAACAACAACTACAAC---CACG----------ACGACGA------------------------CGAC----------------------------------------------------------------AAC-A--ACAACAACTTG--CAAGCC----AACAACAACG--A---------CAACA-A--------CAACAACTTGCAAA----------------------CC----AACAACAACGACAACCACAACAAC
droVir3 scaffold_12855:9365682-9365908 - ACAACAACGA--G-------------CACAAC-AACTACAACAACAACACCTTGCACAACGACGTCGACAACAACGACGACAACAACCACAACAACAA----------------------CAA---------------------------------------------------CATCTACAACAACGACCACAACAACTACA--------------------------------------------------------------------ACGACCACAACAACTACAAC---GACT----------ACAACAACCAC-------AACAACAACACC--TTGCA-C----AA--------------------------------------------------------------CGACAACAAC--GA--------CGA----CGACAACA-----ACGACC----------------------ACA----------------------AC----GTCGACAACAACAACAACGACCAC
droMoj3 scaffold_6496:9002516-9002739 + TCAATAACTACAA-------------C------AACTATAG---TAACTACAGCAACATCAACGATAA--CA----------------------------------GT-----------TTAACAGCAA---------------CAGCAACAG------------------------CTACAGCAACAGCAAC----------ATTGAATAC----A-AAGCACC------------CAATAATAGCA-----------------------------GCCACAATAGTTTC---TATA----------ACAAT------------------AGAAGCAGCTTAGC-TTTA--A--------------------------------------------------------------CTA------A--TAATT-GCCACAT----TCACAGCA-----GC-AACCAG-----------CAAACAACCAG----------------------TC----AATATCAGCAGCAGTAGCAACAGC
droGri2 scaffold_14853:5617436-5617649 - ACAACAACTGCAG-------------CAGCAGCAGCAACAACATCAACCGCTGCAATTGCAGCAGCAG----------------------------------------------------CAA---------------------------------------------------------------------------------------------------------------------TA---TTTAAACAGC-AAT-------AGCAACAGTTGCA-ACAACTGCAGC---AACT----------ATAGCATCTAC-------AACAATAACAACAACAATT-GCTACAT--------------------------------------------------------------CTACAACAAC--AA--------CAA----CAACAGCA-----ATCATCTACA----------ATATCATCTCAACAACAG----------------C----AGCAACAACAACAATCTTGATGAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACAGCAACTGCAG-------------CTGGGC-AACTATAAGACTAACTCCTGCTGGTGTTACGGTGAGTCT----------------------------------GA-----------TTAAGAACAAACAAA-----------------------------------------------------------------------------C----AAACGCAAT------------CAGCA---TCAGCATAGA-ACTATCAA--ATCAAAAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-TATAT--------------------------------------------------------AACTA--TCTATAACTAT--CG--------AGC----TCGCTACA-----ACCAACAAA--------TCTCAACCAACCAG----------------------CC----AACAACAGCATCAATCACCACGTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................AGACTAACTCCTGCTGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
...............................C-AACTATAAGACTAACTCCTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
................................................................GTGAGTCT----------------------------------GA-----------TTAAGAACAAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TATAACTAT--CG--------AGC----TCGCT...........................................................................................1911.00100100000000000000
.........................................................................................................................AAGAACAAACAAA-----------------------------------------------------------------------------C----AAAC................................................................................................................................................................................................................................................................................................................................1821.00200000200000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................C----TCGCTACA-----ACCAACAAA--------TCTC..............................................................2211.00110000000000000000
..................................ACTATAAGACTAACTCCTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
droSec2
ACAGCAACTGCAG-------------CTGGGC-AACTATAAGACTAACTCCTGCTGGTGTTACGGTGAGTCT----------------------------------GA-----------TCAAGAACAAACAAA-----------------------------------------------------------------------------C----AAACGCAAT------------CAGCA---TCAGCATAGA-ACTATCAA--ATCAAAAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-TATAT--------------------------------------------------------AACTA--TCTATAACTAT--CGG-------AGC----TCGCTACA-----ACCAACA-A--------TCTCAACCAA---------AGTAG------------CT----ACAAACAGCATCAATCACCACGTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................ATAAGACTAACTCCTGCTGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...................................................TGCTGGTGTTACGGTGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
.......CTGCAG-------------CTGGGC-AACTATAAGACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001
.....................................ATAAGACTAACTCCTGCTGGTGTTACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
dm3
ACAGCAACTGCAG-------------CTGGGC-AACTATAAGACTAACTCCTGCTGGTGTTACGGTGAGTCT----------------------------------GA-----------TTAAGAACAAACAAA-----------------------------------------------------------------------------CAAACAAACGCAAT------------CAGCA---TCAGCATAGA-ACTATCAA--ATCAAAAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-TATAT--------------------------------------------------------AACTA--TCTATAACTAT--CG--------AGC----TCGCTACA-----GCCAACAAA--------TATCAACCAACCAG----------------------CC----AACAACAGCATCAATCACCACGTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................TATAAGACTAACTCCTGCTGGTGTTACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
............G-------------CTGGGC-AACTATAAGACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GTGAGTCT----------------------------------GA-----------TTAAGAACAAACA........................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................ACTCCTGCTGGTGTTACGGTGAGTCT----------------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003
...GCAACTGCAG-------------CTGGGC-AACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGCAACTGCAG-------------CTGGGC-AACTATAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCAACCAG----------------------CC----AACAACA.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAT--CG--------AGC----TCGCTACA-----GCCAACAAA--------T.................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...........................................CTAACTCCTGCTGGTGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CTCCTGCTGGTGTTACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACAGCAACTGCAG-------------CTGGGC-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGCAACTGCAG-------------CTGGGC-A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GCAG-------------CTGGGC-AACTATAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..............................................ACTCCTGCTGGTGTTACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CAGCAACTGCAG-------------CTGGGC-A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TGCAG-------------CTGGGC-AACTATAAGACTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................GCAAT------------CAGCA---TCAGCATAGA-A...........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................C---TACT----------ACACCATACAT-------AAAAT.................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................ACTTCTC-TATAT--------------------------------------------------------AACTA--TCTATA........................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ACAGCAACTGCAG-------------CTGGGC-GGCTATAAGACTAACTCCTGCTGGTGTTACGGTGAGTCT----------------------------------GA-----------TTAAGAACAA----A-----------------------------------------------------------------------------C----AAACGCAAT------------CAACA---TCAGCATAGA-ACTATCAA--ATCAAAAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-T----AT--------------------------------------------------------CTATAACTATAACTAT--CG--------AGC----TCGCTACA-----ACCAACAAATATCAAAATATCAACCAACCAG----------------------CC----AACAACAGCATCAATCACCACGTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........GCAG-------------CTGGGC-GGCTATAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
droYak3
ACAGCAACTGCAG-------------CTGGGC-GGCTATAAGACAAACTCCTGCTGGTGTTACGGTGAGTCT----------------------------------GA-----------TTAAGAACAA----T-----------------------------------------------------------------------------C----AAACGCAAT------------CAACA---TCAGCATAGA-ACTATCAA--ATCAAAAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTTTC-T----AT--------------------------------------------------------------CTATAACTAT--CG--------AGC----TCGCTACA-----ACCAACAAA--------TATCAACCAACCAG----------------------CC----AACAACAGCATCAATCACCACGTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....AACTGCAG-------------CTGGGC-GGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
droEug1
ACAGCAACAGCAA--------C--TGCTGGGC-AACTATAAGACTAACTCCTGCTGGTGTTACGGTGAGTCT----------------------------------GA-----------TTAAGAACAA---------------------------------------------------------------------------------------AAACGCAAT------------CAACAACATCAGCATAGA-ACTATC-------AAAAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-T----AT------------------------------------------------------------CTATATAACTATCTCG--------AGC----TCGCTACAAACCAACCAACCAAC----------CAACCAACCAG----------------------CC----AACAACAGCATCAATCACCACGTCSizeHit CountTotal NormTotal
No Reads
droBia1
CCA-------------------------------ACTTTAAGACTAACTCCTGCTGGTGTTACGGTGAGTCT----------------------------------GA-----------TTAAGAACCA----------------------------------------------------------------------------------C----AAACGCAAT------------CAACA---TCAGCATAGA-ACTATCAA--ACCAAAGGCTGCGCACAACCTCCTCT-CTACC----------ACACCATACAT-------AAAATGTACACC---TATC-T----AT--------------------------------------------------------CTATCTATATAACTAT--CG--------AGCTCTCTCGCTACA-----ACCAACCAAC----------CAACCAACCAACCAA-ATCAGCCAACCAACCAGCCAACCAACAACAGCATCAATCACCACGTCSizeHit CountTotal NormTotal
No Reads
droTak1
ACAGCAACTGCAG-------------CTGGGC-AACTATAAGACTAACTCCTGCTGGTGTTACGGTGAGTCT----------------------------------GA---------TTTCAAGAAC------------------------------------------------------------------------------------C----AAATGCAAT------------CAACA---TCAGCATAGA-ACTATCAA--ATCAAAAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGAACACCACTTCTC-TATA--T------------------------------------------------------------CTATATAACTAT--CG--------AGC----TCGCTACA-----ACCAACCAAC----------CAACCAACCAG----------------------CC----AACAACAGCATCAATCACCACGTCSizeHit CountTotal NormTotal
No Reads
droEle1
G-------------------------CTTGGA-AACTATAAGACTAACCCCTGCTGGTGTTACGGTGAGTCT--------------------------GAAT------------CAGAATCAAGAACA----------------------------------------------------------------------------------------AAACGCAAT------------CAACA---TCGGCATAGA-ACTAT------TCTAAAGTTGCGCACAACTTCCTCTACTACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-TATAT------------------------------------------------------------A--TCTATAACTAT--CG--------AGC----TCGCTACA-----ACCAACCAAC----------CAACCAACCAG----------------------CC----AACAACAGCATCAATCACCACGTCSizeHit CountTotal NormTotal
No Reads
droRho1
ACAACAACTG----------------CTCGGC-AACTTTAAGACTAACTCCTGCTGGTGTTACGGTGAGTCT----------------------------------GA-----------TTAAGAACA----------------------------------------------------------------------------------------AAACGCAAT------------CAACA---TCAGCATAGA-ACTATC-------TAAAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-T----AT--------------------------------------------------------------CTATAACTAT--CG--------AGC----TCGCTACA-----ACCAACCAAC----------CAACCAACCAG----------------------CC----AACAACAGCATCAATCACCACGTCSizeHit CountTotal NormTotal
No Reads
droFic1
GCAGCCA--GCTG-------------CTGGGC-AACTATAAGACTAACTCCTGCTGGTGTTACGGTGAGTCC--------------------------GAGTCT--GA-----------TTAAGAAC-----------------------------------------------------------------------------------------AAACGCAAT------------CAACA---TCAGCATAGA-ACTATCA--------AAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-T----AT--------------------------------------------------------------CTATAACTAT--CG--------AGC----TCGCTACA-----ACCAACCAAC----------CAACCAACCAGCCAAC----------CA--------ACCAACAACAGCATCAATCACCACGTCSizeHit CountTotal NormTotal
No Reads
droKik1
C-----------G-------------CTGGGC-AACTATAAGACTGCCTCCTGCTGGTGTTACGGTGAGTCC----CC--------------------GAGTATATGCTCAAATCAAAATAAATAA-A----------------------------------------------------------------------------------------AAACGCAAT------------CAGCA---TCAGCATAAA-ACTATCA--------AAGTTGCGCACAACTTCCTC---TACTATATATATATACACCCTACAT-------AAAATGTACACCACTTCTC-TATA----------------------------------------------------------------TCTATAACTAT--CG--------AGC----TCGCTACA-----ACCAACCAAC----------CAACCAACCAATCAACAA----------------C----AGCAACAGCATCAATCACCACGTCSizeHit CountTotal NormTotal
No Reads
droAna3
ACAGCAATTGTCGTTGGGCAATCATGCT-GGC-AACTATAAGACTGCCTCCTGTTGGTGTTACGGTGAGTTT----------------------------------GA---------GATTAAGAA------------------------------------------------------------------------------------AC----AA-GCAAAT------------CAGCA---TCAGCATAGA-ACTATCAA-----AAAAGTTGCGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-TATAT-------------------------------ATTATATATATATATATCT------------CTATATAACTAT--CG--------AGC----TCGCTACA-----ACCAACCAAC----------CAACAA----------------------------A----AGCAACAGCATCAATCACCACGTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........GTCGTTGGGCAATCATGCT-GGC-AACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000020
...................................CTATAAGACTGCCTCCTGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..................................ACTATAAGACTGCCTCCTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
droBip1
ACAGCATC----GTTGGGCAATCATGCT-GGC-AACTATAAGACTGCCTCCTGTTGGTGTTACGGTGAGTTT----------------------------------GA-----------TTAAGAA------------------------------------------------------------------------------------AC----A-AC-CAATCAGCATCAGAATCAGCA---TCAGCATAGA-ACTTTCAACTATCAAAAGTTGTGCACAACTTCCTC---TACT----------ACACCATACAT-------AAAATGTACACCACTTCTC-TATAT-------------------------------A---TATATATATATATGT------------CTATATAACTAT--CG--------AGC----TCGCTACA-----ACCAACCAAC----------CAACAA----------------------------C----AGCAACAGCATCAATCACCACGTCSizeHit CountTotal NormTotal
No Reads
dp5
GCAAGCATTGCCA-------------CTGGGC-AACTATAAGACTGCCTCCTGTTGGTGCTACGGTGAGTGT----------------------------------GA-----------C-----------------------------------------------------------------------------------CTAAGAAAC----A-AAGCAAT------------CAACATCAACAGCATTGAAACAATCAG-----AAAAGTTGCGCACAACTTCCTA---TACT----------ACACCCTACATACTCGTCAAAATGAACACCACTTCTCCT----ATCTATATATGATCGTCTATCAATCGTATATATTGTATATATATATGTACATATATAACTA---CTATAACTAT--CG--------AGCTACATCGCTACA-----ACAAACCAAC----------AAA-------------------------------C----AGCAACAGCATCAATCACCACGTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................ATTGAAACAATCAG-----AAAAGTTGCGCACAA................................................................................................................................................................................................................................................................2911.0010000001000
..................................ACTATAAGACTGCCTCCTGTTGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
droPer2
GCAAGCATTGCCA-------------CTGGGC-AACTATA-GACTGCCTCCTGTTGGTGCTACGGTGAGTGT----------------------------------GA-----------C-----------------------------------------------------------------------------------CTAAGAAAC----A-AAGCAAT------------CAACATCAACAGCATTGAAACAATCAG-----AAAAGTTGCGCACAACTTCCTA---TACT----------ACACCCTACATACTCGTCAAAATGAACACCACTTCTCCT----ATCTATATATGATCGTCTATCAATCGTATATATTGTATATATATATGTACATATATAACTA---CTATAACTAT--CG--------AGCTACATCGCTACA-----ACAAACCAAC----------AAA-------------------------------C----AGCAACAGCATCAATCACCACGTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
ACAACAACTACAA--------C----CACGAC-AACAACAACAACAACTACAACCACGACGACGACGACAAC----------------------------------AA------------CAACAACTTGCAAACCAACAACAACGACAACAACAACAACTTGCAAACCAACAACAACGACAACAACAACTACAACCACGACA--------------------------------------------------------------------ACAACAACAACAACTACAAC---CACG----------ACGACGA------------------------CGAC----------------------------------------------------------------AAC-A--ACAACAACTTG--CAAGCC----AACAACAACG--A---------CAACA-A--------CAACAACTTGCAAA----------------------CC----AACAACAACGACAACCACAACAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................GACGACGACAAC----------------------------------AA------------CAACAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................21200.20440000
......................................................................................................................................................................................................................................................................................................................GACGA------------------------CGAC----------------------------------------------------------------AAC-A--ACAACAAC......................................................................................................................21200.20440000
.......................................AACAACAACTACAACCACGACGACGACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2860.17100100
....................................................................................................................................................................................................................................................................................AACAACAACTACAAC---CACG----------ACGACGA------------------------CG.......................................................................................................................................................................................................2860.17100100
..................................................................................................................................................................................GACAACAACAACTACAACCACG....................................................................................................................................................................................................................................................................................................................................................2260.17100100
............................................................................................................................................................................AACAACGACAACAACAACTACAACCACGA...................................................................................................................................................................................................................................................................................................................................................2960.17101000
..............................................................CGACGACAAC----------------------------------AA------------CAACAACTTGCA........................................................................................................................................................................................................................................................................................................................................................................................................................2470.14101000
..........................................AACAACTACAACCACGACGACGACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.14100100
..............................................................CGACGACAAC----------------------------------AA------------CAACAACTTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2370.14101000
.......................................................................................................................................................................................................................................................................................AACAACTACAAC---CACG----------ACGACGA------------------------CG.......................................................................................................................................................................................................2570.14100100
........................................................................................................................................................................................................................................................................................................................CGA------------------------CGAC----------------------------------------------------------------AAC-A--ACAACAACTTG--C................................................................................................................2370.14101000
............................................................GACGACGACAAC----------------------------------AA------------CAACAACT............................................................................................................................................................................................................................................................................................................................................................................................................................2270.14110000
........................................................................................................................................................................................................................................................................................................................CGA------------------------CGAC----------------------------------------------------------------AAC-A--ACAACAACTTG--CA...............................................................................................................2470.14101000
......................................................................................................................................................................................................................................................................................................................GACGA------------------------CGAC----------------------------------------------------------------AAC-A--ACAACAACT.....................................................................................................................2270.14110000
...............................................CTACAACCACGACGACGACGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.13100100
..........................................................................................................................................................................................................................................................................................AACTACAAC---CACG----------ACGACGA------------------------CGAC----------------------------------------------------------------.....................................................................................................................................2480.13100100
.............................................AACTACAACCACGACGACGACGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.13100100
............................................................................................................................................................................................................................................................................................CTACAAC---CACG----------ACGACGA------------------------CGA......................................................................................................................................................................................................2180.13100100
........................................................................................................................................AACAACAACGACAACAACAACAACTT..........................................................................................................................................................................................................................................................................................................................................................................................2690.11101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACG--A---------CAACA-A--------CAACAACTT.........................................................2690.11101000
...............................................................GACGACAAC----------------------------------AA------------CAACAACT............................................................................................................................................................................................................................................................................................................................................................................................................................19130.08101000
.........................................................................................................................................................................................................................................................................................................................GA------------------------CGAC----------------------------------------------------------------AAC-A--ACAACAACT.....................................................................................................................19130.08101000
...............................................................................................................................................ACGACAACAACAACAACTTGC........................................................................................................................................................................................................................................................................................................................................................................................21160.06101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACG--A---------CAACA-A--------CAACAACTTGC.......................................................21160.06101000
..........................................................................................................................................................................................................................................................................................................................A------------------------CGAC----------------------------------------------------------------AAC-A--ACAACAACTTG--C................................................................................................................21160.06101000
................................................................ACGACAAC----------------------------------AA------------CAACAACTTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................21160.06101000
......................................................CACGACGACGACGACAAC----------------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................18170.06110000
......................................................................................................................................................................................................................................................................................................CACG----------ACGACGA------------------------CGAC----------------------------------------------------------------AAC-.................................................................................................................................18170.06110000
droVir3
ACAACAACGA--G-------------CACAAC-AACTACAACAACAACACCTTGCACAACGACGTCGACAACAACGACGACAACAACCACAACAACAA----------------------CAA---------------------------------------------------CATCTACAACAACGACCACAACAACTACA--------------------------------------------------------------------ACGACCACAACAACTACAAC---GACT----------ACAACAACCAC-------AACAACAACACC--TTGCA-C----AA--------------------------------------------------------------CGACAACAAC--GA--------CGA----CGACAACA-----ACGACC----------------------ACA----------------------AC----GTCGACAACAACAACAACGACCACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACA-----ACGACC----------------------ACA----------------------AC----GT......................2017.007001000000000000102000000000000000000000000000000000000000000030
..........................................AACAACACCTTGCACAACGACGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2344.75190010000000000000011020000000000000000000000000000000000000000050
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GA----CGACAACA-----ACGACC----------------------ACA----------------------AC----GT......................2314.004000000000000000003010000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GA--------CGA----CGACAACA-----ACGACC----------------------ACA----------------------AC----GT......................2614.004000000000000000003010000000000000000000000000000000000000000000
.................................................................CGACAACAACGACGACAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1953.80190000000000000000015110000000000000000000000000000000000000000020
.................................................................CGACAACAACGACGACAACAACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2343.2513901000000000000003000000000000000000000000000000000000000000000
.............................................AACACCTTGCACAACGACGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2043.0012000000000000000026030000000000000000000000000000000000000000010
.................................................................CGACAACAACGACGACAACAACCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2532.337201000000000000002020000000000000000000000000000000000000000000
...................................................TTGCACAACGACGTCGACAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2232.006400000000000000100000000000000000000000000000000000000000100000
..............................................ACACCTTGCACAACGACGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1942.008001000000000000006010000000000000000000000000000000000000000000
.................................................................CGACAACAACGACGACAACAACCACAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2731.675002000000000000003000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACC----------------------ACA----------------------AC----GTCGACAACAACA...........2131.334300000000000000010000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAACAACAACAACGACCA.2131.334100000000000000003000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................C----AA--------------------------------------------------------------CGACAACAAC--GA--------CGA----CGACAT..........................................................................................2431.334000000000000000004000000000000000000000000000000000000000000000
....................................................TGCACAACGACGTCGACAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2131.334300000000000000010000000000000000000000000000000000000000000000
.....................................ACAACAACAACACCTTGCACAACGACGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2831.334000000000000000003000000000000000000000000000000000000000000010
...........................................ACAACACCTTGCACAACGACGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2241.255000000000000000005000000000000000000000000000000000000000000000
............................................CAACACCTTGCACAACGACGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2141.255000000000000000004000000000000000000000000000000000000000000010
...............................C-AACTACAACAACAACACCTTGCACAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................CAACCACAACAACAA----------------------CAA---------------------------------------------------CATCT.........................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA-----ACGACC----------------------ACA----------------------AC----GTCG....................2011.001000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................CAACAACGACCACAACAACT....................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CGA----CGACAACA-----ACGACC----------------------ACA----------------------AC----GTCGA...................2711.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................CGACCACAACAACTACA--------------------------------------------------------------------ACGACCACAAC..................................................................................................................................................................................................................................................................2811.001000000000000000010000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................ACGACCACAACAACTACAAC---GACT----------........................................................................................................................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA----------------------AC----GTCGACAACAACAAC.........2031.003000000000000000200000000000000000000000000000000000000000000010
.......................................................ACAACGACGTCGACAACAACGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2241.004200000000000000020000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAACA-----ACGACC----------------------ACA----------------------AC----GTCG....................2311.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................AACAACGACCACAACAACTACA--------------------------------------------------------------------ACGACC.......................................................................................................................................................................................................................................................................2811.001100000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................CTACAACAACGACCACAACAACTACA--------------------------------------------------------------------AC...........................................................................................................................................................................................................................................................................2811.001000000000000000000010000000000000000000000000000000000000000000
.....................................................................................................................................................................................AACAACGACCACAACAACT....................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
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...........................................................................................................................................................................................................................................................................................................................................CAACACC--TTGCA-C----AA--------------------------------------------------------------CGAC.........................................................................................................................19110.182000000000000000011000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................ACAACACC--TTGCA-C----AA--------------------------------------------------------------CGAC.........................................................................................................................20110.182000000000000000001000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................AACAACACC--TTGCA-C----AA--------------------------------------------------------------CG...........................................................................................................................19110.182000000000000000002000000000000000000000000000000000000000000000
...........................................ACAACACCTTGCACAACGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.182000000000000000001000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................AACCAC-------AACAACAACACC--TTGCA-C----AA--------------------------------------------------------------C............................................................................................................................2760.171000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AACCAC-------AACAACAACACC--TTGCA-C----A............................................................................................................................................................................................2560.171000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CAC-------AACAACAACACC--TTGCA-C----AA--------------------------------------------------------------CGA..........................................................................................................................2660.171000000000000000000010000000000000000000000000000000000000000000
.............................................................................CGACAACAACCACAACAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.172000000000000000001010000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................CCAC-------AACAACAACACC--TTGCA-C----AA--------------------------------------------------------------CGA..........................................................................................................................2760.171000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................CCAC-------AACAACAACACC--TTGCA-C----AA--------------------------------------------------------------C............................................................................................................................2560.171000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AACCAC-------AACAACAACACC--TTGC....................................................................................................................................................................................................2260.171000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CAC-------AACAACAACACC--TTGCA-C----AA--------------------------------------------------------------C............................................................................................................................2460.171000000000000000001000000000000000000000000000000000000000000000
....................................................................CAACAACGACGACAACAACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.171000000000000000000010000000000000000000000000000000000000000000
...................................................................ACAACAACGACGACAACAACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.171000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CAACCAC-------AACAACAACACC--TT......................................................................................................................................................................................................2160.171000000000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................CCAC-------AACAACAACACC--TTGC....................................................................................................................................................................................................2060.171000000000000000001000000000000000000000000000000000000000000000
...........................................................................GACGACAACAACCACAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.171000000000000000000010000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC--GA--------CGA----CGACAACA-----AC.................................................................................19120.172100000000000000001000000000000000000000000000000000000000000000
............................................................................ACGACAACAACCACAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.141001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................ACACC--TTGCA-C----AA--------------------------------------------------------------CGACAAC......................................................................................................................2070.141000000000000000001000000000000000000000000000000000000000000000
.......................................................................CAACGACGACAACAACCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.141000000000000000000010000000000000000000000000000000000000000000
.....................................................................AACAACGACGACAACAACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.141000000000000000100000000000000000000000000000000000000000000000
..........................................................................CGACGACAACAACCACAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.141000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AACACC--TTGCA-C----AA--------------------------------------------------------------CGACA........................................................................................................................1970.141000000000000000010000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AACAACACC--TTGCA-C----AA--------------------------------------------------------------CGACA........................................................................................................................2270.141001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................C----AA--------------------------------------------------------------CGACAACAAC--GA--------CGA----C...............................................................................................1980.131000000000000000001000000000000000000000000000000000000000000000
.......................................................ACAACGACGTCGACAACAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.111000000000000000001000000000000000000000000000000000000000000000
.............................................................................CGACAACAACCACAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.111000000000000000000010000000000000000000000000000000000000000000
............................................................................ACGACAACAACCACAACAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.111000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................AC-------AACAACAACACC--TTGCA-C----AA--------------------------------------------------------------CGA..........................................................................................................................25100.101000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACAAC--GA--------CGA----CGAC............................................................................................18100.101100000000000000000000000000000000000000000000000000000000000000
.......................................AACAACAACACCTTGCACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19100.101000000000000000010000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................C-------AACAACAACACC--TTGCA-..................................................................................................................................................................................................18100.101000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................AACAACAACACC--TTGCA-C----AA--------------------------------------------------------------.............................................................................................................................20100.101000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................AACAACAACACC--TTGCA-C----AA--------------------------------------------------------------C............................................................................................................................21100.101001000000000000000000000000000000000000000000000000000000000000
......................................CAACAACAACACCTTGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.101000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................C-------AACAACAACACC--TTGCA-C----.............................................................................................................................................................................................19100.101000000000000000001000000000000000000000000000000000000000000000
......................................CAACAACAACACCTTGCAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19100.101000000000000000001000000000000000000000000000000000000000000000
.....................................ACAACAACAACACCTTGCAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.101000000000000000000010000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................AC-------AACAACAACACC--TTGCA-C----.............................................................................................................................................................................................20100.101000000000000000000010000000000000000000000000000000000000000000
.......................................AACAACAACACCTTGCACAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.101000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................AACAACAACACC--TTGCA-C----A............................................................................................................................................................................................19100.101000000000000000010000000000000000000000000000000000000000000000
.....................................ACAACAACAACACCTTGCACAACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25100.101000000000000000001000000000000000000000000000000000000000000000
.......................................AACAACAACACCTTGCACAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.101001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................ACAACAACACC--TTGCA-C----AA--------------------------------------------------------------CGA..........................................................................................................................22110.091000000000000000001000000000000000000000000000000000000000000000
...........................................ACAACACCTTGCACAACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19110.091000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................CAACAACACC--TTGCA-C----AA--------------------------------------------------------------CGAC.........................................................................................................................22110.091000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................ACAACACC--TTGCA-C----AA--------------------------------------------------------------CGA..........................................................................................................................19110.091000000000000000001000000000000000000000000000000000000000000000
..............................................................................GACAACAACCACAACAACAA----------------------C...................................................................................................................................................................................................................................................................................................................................................................................................................................21110.091000000000000000001000000000000000000000000000000000000000000000
........................................ACAACAACACCTTGCACAACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22110.091000000000000000001000000000000000000000000000000000000000000000
............................................CAACACCTTGCACAACGACGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.091000000000000000001000000000000000000000000000000000000000000000
.........................................CAACAACACCTTGCACAACGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22110.091000000000000000001000000000000000000000000000000000000000000000
..........................................AACAACACCTTGCACAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18120.081000000000000000001000000000000000000000000000000000000000000000
droMoj3
TCAATAACTACAA-------------C------AACTATAG---TAACTACAGCAACATCAACGATAA--CA----------------------------------GT-----------TTAACAGCAA---------------CAGCAACAG------------------------CTACAGCAACAGCAAC----------ATTGAATAC----A-AAGCACC------------CAATAATAGCA-----------------------------GCCACAATAGTTTC---TATA----------ACAAT------------------AGAAGCAGCTTAGC-TTTA--A--------------------------------------------------------------CTA------A--TAATT-GCCACAT----TCACAGCA-----GC-AACCAG-----------CAAACAACCAG----------------------TC----AATATCAGCAGCAGTAGCAACAGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGTAGCAACAGC19200.102000020
..................................................................................................................................................GCAACAG------------------------CTACAGCAACAGCA.............................................................................................................................................................................................................................................................................................................................................................21180.061000010
..........................................................................................................................ACAGCAA---------------CAGCAACAG------------------------CTAC.......................................................................................................................................................................................................................................................................................................................................................................20200.051010000
droGri2
ACAACAACTGCAG-------------CAGCAGCAGCAACAACATCAACCGCTGCAATTGCAGCAGCAG----------------------------------------------------CAA---------------------------------------------------------------------------------------------------------------------TA---TTTAAACAGC-AAT-------AGCAACAGTTGCA-ACAACTGCAGC---AACT----------ATAGCATCTAC-------AACAATAACAACAACAATT-GCTACAT--------------------------------------------------------------CTACAACAAC--AA--------CAA----CAACAGCA-----ATCATCTACA----------ATATCATCTCAACAACAG----------------C----AGCAACAACAACAATCTTGATGATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
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Generated: 05/18/2015 at 06:24 PM