ID:

dsi_23929

 Coordinate:

2r:12522201-12522355 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GACCAAGGTCAATACGGATGTGCAACCCGTCTTTATTCGCTCTCTGAAAGGTAAGATATTGGGTATCGGATGAGTGTCCGTGATCGATCGAATCATCTATAATTAGCGATGTGTATAATTGTGCAGTGCCATTGACTGCATTCGTTATGCAATGCTATTTTGGCAACGTTTTTATGTAACCAGTCTCGGTGTTTCTCTCTCTCAGAGACCTATCACCTGAACACCAACGAACTGATCCTGGAGACAGCTGTGCGG
**************************************************...(((((((((((((.((((((.((..((....))..))..)))))))))..(((((...((((((((.(((((((.......)))))))..)))))))).)))))..((((..((((....))))..)))).))))))))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
................................TTATTCGCTCTCTGAAAG............................................................................................................................................................................................................. 18 0 1 2.00 2 1 0 1 0 0 0 0 0
..........................................................................................................................................................................................................AAGAGACCTATCACCTGAAC................................. 20 1 1 2.00 2 0 2 0 0 0 0 0 0
GACCAAGGTCAATACGGATGTGCAACC.................................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
GACCAAGGTCAATACGGATGTGCAACCC................................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................ACGAACTGATCCTGGAGACA......... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AGACCTATCACCTGAACACC.............................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................CTGAAAGAGACCTATCACCTGAACACC.............................. 27 3 1 1.00 1 1 0 0 0 0 0 0 0
.............................TCTTTATTCGCTCTCTGAAAGG............................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................CCAACGAACTGATCCTGGAGAC.......... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
..CCAAGGTCAATACGGATGTGC........................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0
..........AATACGGATGTGCAACCCGTCT............................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................AGAGACCTATCACCTGAACA................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................CTCTGAAAGAGACCTATCACCTGAACAC............................... 28 3 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AGAGACCTATCACCTGAACACC.............................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................AACGAACTGATCCTGGAGACA......... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................AATCGGATGGGTGTCCGAGA............................................................................................................................................................................ 20 3 2 0.50 1 0 0 0 0 0 1 0 0
....................TGCAACCGGACTTTATTCAC....................................................................................................................................................................................................................... 20 3 8 0.50 4 0 1 3 0 0 0 0 0
.............................................................TGTATCAGATGAGTGTCAGTGA............................................................................................................................................................................ 22 3 2 0.50 1 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................................CAATGAACAGATCCTCGAGAC.......... 21 3 2 0.50 1 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................CATGAACACCAACGAAGTGCT................... 21 3 4 0.25 1 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................TCGGTGTTTTTCTCTCTCCGAT................................................ 22 3 4 0.25 1 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................................................................ATCCTGGAGATAGCT...... 15 1 8 0.13 1 0 0 0 0 0 0 0 1
..........................................................................TGTGCTTGATCGATCGA.................................................................................................................................................................... 17 2 11 0.09 1 0 0 0 0 0 0 0 1
..........................................................................TGTCCTTGATCGATAGA.................................................................................................................................................................... 17 2 11 0.09 1 0 0 0 0 0 0 0 1
...................................................AGAGATATTAGGTATCGGA......................................................................................................................................................................................... 19 3 16 0.06 1 0 0 0 0 0 0 1 0
................................................................................................................................................................................GAACCAATCTCGGTGTTC............................................................. 18 3 20 0.05 1 0 0 0 0 0 0 1 0
................................................................................................................................CCATTGACAGCATTCCT.............................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 1 0

Anti-sense strand reads

CTGGTTCCAGTTATGCCTACACGTTGGGCAGAAATAAGCGAGAGACTTTCCATTCTATAACCCATAGCCTACTCACAGGCACTAGCTAGCTTAGTAGATATTAATCGCTACACATATTAACACGTCACGGTAACTGACGTAAGCAATACGTTACGATAAAACCGTTGCAAAAATACATTGGTCAGAGCCACAAAGAGAGAGAGTCTCTGGATAGTGGACTTGTGGTTGCTTGACTAGGACCTCTGTCGACACGCC
**************************************************...(((((((((((((.((((((.((..((....))..))..)))))))))..(((((...((((((((.(((((((.......)))))))..)))))))).)))))..((((..((((....))))..)))).))))))))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
....................................AGCGCGAGACATTCCATTCTGT..................................................................................................................................................................................................... 22 3 1 6.00 6 6 0 0 0 0 0 0 0
..............................................................CATAGACTACTCGCAGGC............................................................................................................................................................................... 18 2 1 2.00 2 0 1 1 0 0 0 0 0
..............................................................CATAGACTACTCGCAGGCAC............................................................................................................................................................................. 20 2 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................AAAAAGTGTCTCTGGATAGTG....................................... 21 3 1 1.00 1 0 0 0 1 0 0 0 0
.................................................................AGACTACTCGCAGGCAC............................................................................................................................................................................. 17 2 6 0.83 5 0 5 0 0 0 0 0 0
...............................................................ATAGACTACTCGCAGGC............................................................................................................................................................................... 17 2 5 0.40 2 0 1 1 0 0 0 0 0
........................TGGCCAGAAATAAGCG....................................................................................................................................................................................................................... 16 1 3 0.33 1 0 0 0 0 1 0 0 0
...............................................................CTAGCCTTCTCGCAGGCAC............................................................................................................................................................................. 19 3 14 0.29 4 0 0 0 0 0 4 0 0
................................................................TAGACTACTCGCAGGCAC............................................................................................................................................................................. 18 2 4 0.25 1 0 1 0 0 0 0 0 0
.......................TTTGCCAGAAATAAGCGCG..................................................................................................................................................................................................................... 19 3 20 0.15 3 0 0 0 0 3 0 0 0
...............................................................................................................................................................................................................................GGTCGCTCGACTAGGACC.............. 18 2 7 0.14 1 0 0 0 0 0 0 1 0
.....................CTGTGGCCAGAAATAAGCG....................................................................................................................................................................................................................... 19 3 8 0.13 1 0 0 0 0 1 0 0 0
................................................................TAGACTACTCGCAGGCACA............................................................................................................................................................................ 19 3 10 0.10 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................AGTCGAGTTGTGGTTGCT......................... 18 2 10 0.10 1 0 0 0 0 1 0 0 0
........AGTTATGCATACACGCTAGG................................................................................................................................................................................................................................... 20 3 15 0.07 1 1 0 0 0 0 0 0 0
...............................................................................................................TCAGATTAACACGTCA................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 0 1
..............................................................................................................................................................................................................TTGGATAGTGGACTAGTAG.............................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:12522151-12522405 - dsi_23929 GACCAAGGTCAATACGGATGTGCAACCCGTCTTTATTCGCTCTCTGAAAGGTAAGATATTG-----------------------G-----GTA-----TC----------------G------GATGAGTG-------------T----------------------------------------CCG--TGATCG-ATCG------------AATCATCTATAATT-AGCGA-------------TGTGTA--TAATTGTGCAGTGCC-------ATTGACTGCA-------TTCGTTATGCAATG-------------------------CT-------------AT----------TTTG-----GCAACG----------------------------------------------------------------------------TTTTTATGTAACCAGT--------------------------------------------------C---TCGGTGTTTCT-C--TCTCTCAGAGACCTATCACCTGAACACCAACGAACTGATCCTGGAGACAGCTGTGCGG
droSec2 scaffold_1:9352218-9352472 - GACCAAGGTCAATACGGATGTGCAACCCGTCTTTATTCGCTCTCTGAAAGGTAAGATATTG-----------------------G-----GTA-----TC----------------G------GATGAGTG-------------T----------------------------------------CCG--TGATCG-ATCG------------AATCATCTATAATT-AGCAA-------------TGTGTA--TAATTGTGCAGTGCC-------ATTGACTGCA-------TTCGTTATGCAATG-------------------------TT-------------AT----------TTTG-----GCAACG----------------------------------------------------------------------------TTTTTATGTAACCAGT--------------------------------------------------C---TCGGTGTTTCT-C--TCTCTCAGAGACCTATCACCTGAACACCAACGAACTGATCCTGGAGACAGCTGTGCGG
dm3 chr2R:11852112-11852366 - GACCAAGGTCAATACGGATGTGCAACCCGTCTTTATACGCTCTCTGAAAGGTAAGATATTG-----------------------G-----GTA-----TC----------------G------GATGAGTG-------------T----------------------------------------TCG--TAATCG-ATCG------------AATCATCTATAATT-AGCAG-------------TGTGTA--TAATTGTGCAGTGCC-------ATTGACTGCA-------TTCGTTATGCAATG-------------------------CT-------------AT----------TTTG-----GCAACG----------------------------------------------------------------------------TTTTTATGTAACCAGT--------------------------------------------------C---TCGGTGTTTCT-C--TCTCTCAGAGACCTATCACCTGAACACCAACGAACTGATCCTGGAGACAGCTGTCCGG
droEre2 scaffold_4845:14005674-14005933 + GACCAAGGTCAACACGGATGTGCAACCCGTCTTTATTCGCTCTCTGAAAGGTAAGATATTGGGTATTG----------------G-----GTA-----TC----------------G------GATGAGTG-------------T----------------------------------------TCG--AGATCG-ATCG------------AATCATCTATAATT-AGCAA-------------TGTGTA--TAATTGTGCATTGCC-------ATTGACTGCA-------ATTATTATGCAATG-------------------------CT-------------AT----------TCTG-----GCAATG----------------------------------------------------------------------------TTTTTATGTAACCAGT--------------------------------------------------C---TCGGTGTTTCG-C----TCTCAGAGACCTATCACCTAAATACCAACGAACTGATCCTGGAGACAGCTGTGAGG
droYak3 2R:17129804-17130065 + dya_598 GACCAAGGTCAACACGGATGTGCAACCCGTCTTTATTCGCTCTCTGAAAGGTAAGATTTTGGGTATTG----------------G-----GTA-----TC----------------G------GATGAGTGTG-----------T----------------------------------------TCG--TGATCG-ATCG------------ATTCATCTATAATT-AGCAG-------------TGTGTA--CAATTGTGCAATGCC-------AGTGACTGCA-------ATCATTATGCAATG-------------------------CT-------------AT----------TTTG-----GCAATG----------------------------------------------------------------------------TTTTTATGTAACCAGT--------------------------------------------------C---TCGGTGTTTCT-C----TCTCAGAGACCTATCACCTGAACACCAACGAGCTGATCCTGGAGACAGCTGTGAGG
droEug1 scf7180000409672:762896-763152 - GACCAAGGTCAACACGGATGTGCAACCCGTCTTTATTCGCTCTCTGAAAGGTAAGATATTG-----------------------G-----GTA-----AC----------------G------GATGAGTA-------------T----------------------------------------TCG----ATCG-ATCG------------AATCATCTATATTT-AGCAAT-----CGACA--TGTGTA--TGATTGTGCAATGCC-------ATTGATTGCA-------ATCATTATGCAATA-------------------------TT-------------TT----------TTT------GCACTG-----C----------------------------------------------------------------------TTTTTATATAACCAGT--------------------------------------------------C---TCGGTGTTTCT-C----TCTTAGAGACCTATCACCTGAACACCAATGAGCTGATCCTGGAGACAGCTGTTAGA
droBia1 scf7180000302292:2026836-2027112 - GGCGAAGGTCAACACGGATGTGCAGCCCGTCTTCATTCGCTCTCTTAAAGGTAAGGTATTG-----------------------G-----GTA-----TCG-------------ATG------GATGAGTGTG-----------T----------------------------------------CCGATCGATCGGATCG------------AACCGCTTATATTT-AGCAAT-----CGAGA--TGTGTA--TGATTGTGCAATGCC-------ATTGATCGCC-------GCCCTTATGCAATG------G------------------CT-------------TT-T--------TTTC-----GGGATGTGCT------------------------------------------------------------------------CTGTTATGTAACCCAT--------------------------------------------------C---TCGGTGTTTCT-CTCTCTCGTAGAGACCTATCACCTGAACACCAACGAGCTGATCCTAGAGACGGCTGTGAGG
droTak1 scf7180000415795:709448-709703 + GACGAAGGTCAACACCGATGTCCAACCCGTCTTTATTCGCTCTCTGAAAGGTAAGATATTC-----------------------G-----GTA-----TC----------------G------GATGAGTGTG-----------T----------------------------------------TCGATCGATCG-ATCG------------GATCGTCTATATTT-AGCAAT-----CGACAACAGTGTA--TGATTGTGCAATGCC-------AATGGTCGCA-------GCCATTATGCAATG-----------------------------------------------------------------------------------------------------------------------------------------------TTTTTATGCAACCCGT--------------------------------------------------CTTCTCGGTGTTTTT-C--TCTCACAGAGACCTATCACCTGAACACCAACGAGCTGATCCTGGAGACAGCTGTGAGG
droEle1 scf7180000491107:856529-856782 - GCCGAAGGTCAACACGGATGTACAGCCCGTCTTTATTCGCTCTTTGAAAGGTAAGATATTG-----------------------G-----G---------------------------------ATG------------------------------------------------------------------TTA-AACA------------ATCCATCTATAATT-AGCCAT-----CAACG-TTGTGTATCTGGTTGTGCAATGCC-------ATTGATACAA-------TCCATTATGCAATG-------------------------GG-------------TTCTTTCTT---GTTG-----GCAATG----------------------------------------------------------------------------TTTTTATGTAACCCGT--------------------------------------------------CT-CTCGGTGTTTCT-C----TCCCAGAAACCTACCACCTGAACACCAACGAGCTAATCCTGGAGACGGCCGTAAGG
droRho1 scf7180000779911:244516-244778 + GCCGAAGGTCAACACGGATGTTCAGCCCGTCTTTATTCGGTCTCTCAAAGGTAAGATCTTC-----------------------G-----GTG-----TC----------------G------GATGAGTG-------------------------------------------------------------ATCA-ATCG------------ATTCATCTATAATT-AGCCGT-----AAACA-TTGTGTACACTATTGTGCAATGCC-------ATTGATACGA-------GCCATTATGCAATG-------------------------GG-------------TTCTTTCTC---TTTG-----ACAATG----------------------------------------------------------------------------TTTTTATGTAACAAGT--------------------------------------------------C---TCGGTGTTTCC-C----TACCAGAAACCTACCACCTGAACACCAACGAACTGATCCTGGAGACGGCCGTGAGG
droFic1 scf7180000453948:1102838-1103132 - GCCGAAGGTCAACACGGATGTGCAGCCCGTCTTCATTCGCTCGCTGAAAGGTAAGATCTTG-----------------------G-----GTA-----TC----------------G------GATGGGAT-------------A----------------------ATAGCT-----AT-----CCGATCGATCG-ATCGATCGCTAGATCCGTCCGTCTATTATT-AGCCAA-----CGACA-TTGCCTT--TGGTTGTGCAATGCC-------ATTGACTGCCGTCTACGGCCATTATGCAATG-------------------------GC-------------TTCTTTT-C---TATG-----GCACTG----------------------------------------------------------------------------ACTTTACGTAACCCGT--------------------------------------------------A---TCGGTGTTTCT-C----TCCCAGAAACCTACCACCTGAACACCAACGAGCTGATCCTGGAGACGGCGGTGCGC
droKik1 scf7180000302385:1084084-1084344 - GCCAAAGGTCAACACGGATGTGCAGCCCGTCTTTATACGCTCTCTGAAAGGTAAGATCTCG-----------------------------------------------------CTG------GC--AGCG------------------------------------------------------TCGATCGATCG-ACCG------------ATTGATCTATATTT-AGAGATCCATCCCACA-TTGTGTG--TGATTGTGCAATGCCATCATCCATCGATCGTT-------TCCATTATGCAATG-------------------------AG-------------T-----------------------GTG----------------------------------------------------------------------------TGCTTACGTAACCGGA--------------------------------------------------C---TCGGTGCTCTT-C--TCCTCTAGAAACCTATCATCTTAACACCAACGAGTTGATCCTGGAGACAGCCGTGCGT
droAna3 scaffold_13266:11872613-11872941 + GCCTAAGGTGAACACGGACGTGCAGCCCGTCTTTATTCGCTCTCTGAAAGGTAAGAGGTC---------------------TTCG-----GTT-----CGGGCACTGCACCCTGTTCCCA---GATACC---------------------------------------------------------------------------------------TCTCTAGAATTGA----------------------G--CAATTGTATAATCCC-------ATC---AGAA-------CCCCTTACGCAACAAATGGTGTATTCTAATCATGAACGTTTGTTTCGCTAAGGGTTCTGGATTTCGATTTGAGG-----GA--------TTTGGGGATCGATGGGACTGTTCCAGTATCACAAAGTGTTACTAT-T---------------------TGGTTATATAACCAGT--------------------------------------------------T---T--------------TTTTTTAGAAACATATCATCTAAACACCAATGAGCTGATTCTGGAGACAGCAGTGCGC
droBip1 scf7180000396547:604728-605054 - GCCGAAGGTGAACACGGACGTGCAGCCCGTCTTCATTCGTTCTCTCAAAGGTAGGGGATC---------------------TTCG-----ATT-----CCGGCACGAGACCCTGTTCCCA---GACACC------------------------------------------------------------------T-CTCG------------A------------------------------------GG--CAATTGTATAATCCC-------ATTAGTAGAA-------CCCCTTACGCAACAAATGATTCATTCTTGTAAAGAGCATTTGTTTCGCAAAGGCTTCCTTTTTGGGATTGATGG-----AT--------TTTCGAGTTCGATGGGACTGTTCCGGTATCAGAAAGGGTTACTGTTT---------------------TGGTTTTCTAACCAGT--------------------------------------------------T---T--------------GTTTTCAGAAACTTATCATCTAAACACCAACGAGCTGATTCTGGAGACAGCCGTGCGC
dp5 3:18973576-18973931 + GGCGAAGGTCAACACCGATGTCCAGCCCGTGTTCATACGTTCGCTAAAAGGTAAGGGATCG--CATCGAGCAGGCATCACAATCGTCTCCTCA-----TC----------------G------GATGAGAG-------------A-----------------------------TCAGATCAGATCAG--TGAGA-----G------------ATCGATCTATACTT-AGAAG--CATCCGACA-TTATTCG--TGGTTGTGCAATGCC-------ATTAAT-------------CGTTATGCAAGCCATTATG------------------TT-------------GT------T---TGTG-----GTGATGTGATGTGATAT--------------------------------GT-------------CTTCTCT--C-TGCAGCATGCT----------------GAATTCTGCATTCGTTGCATAATACAAATCTCTTCCACCTTCTTCC---------CTTCCC-C--ACTTAAAGACACCTATCATCTGAACACCAATGAGCTAATTCTGGAGACGGCGGTGCGA
droPer2 scaffold_242:5285-5640 + GGCGAAGGTCAACACCGATGTCCAGCCCGTGTTCATACGTTCGCTAAAAGGTAAGGGATCG--CATCGAGCAGGCATCACAATCGTCTCCTCA-----TC----------------G------GATGAGAG-------------A-----------------------------TCAGATCAGATCAG--TGAGA-----G------------ATCGATCTATACTT-AGAAG--CATCCGACA-TTATTCG--TGGTTGTGCAATGCC-------ATTAAT-------------CGTTATGCAATTCATTATG------------------TT-------------GT------T---TGTG-----GTGATGTGATGTGATAT--------------------------------GT-------------CTTCTCT--C-TGCAGCATGCT----------------GAATTCTGCATTCGTTGCATAATAGAAATCTCTTCCACCTTCTTCC---------CTTCCC-C--ACTTAAAGACACCTATCATCTGAACACCAATGAGCTGATTCTGGAGACGGCGGTGCGA
droWil2 scf2_1100000004558:868681-868908 - GCCAAAGGTCGATACGGATGTGCAACCAGTCTTCATTCGCTCTCTAAAAGGTAAGC------------------------------------------------------------------------------------------------------------------------------------------AG-GCAG------------ACGCATTGACGTTC-AAAAT-------------TAGACA--CCATTATGCAATGAC-------TTCCATT--A-------GTCATTGTGCAACA-------------------------AT-------------CT----------TGTC-----ATTCCG----------------------------------------------------------------------------AACTTATGTAACATGT--------------------------------------------------G---TTGTTATTTCTGCTATCTATCAGAGACCTATCATCTCAACAGTAATGAATTGATTTTGGAGACCGCTGTGCGC
droVir3 scaffold_12875:17287042-17287367 - dvi_7459 GCCGAAGGTCAACACCGATGTACAACCTGTTTTCATACGCTCTCTGAAAGGTAAGAGCCA---------------------TTCGTCTATTCGTCTATTC-----------GCCTAGGCA---GATGCCTG-----------------------------------------------ACC---------AGA---------------------TAGATCTATGAAT-AGA------TC-AAAG-CTATAGA--CGATTGTGCAATGCA-------ATTGTTTGTCTTGTC--GGGATTATGCAATA-------------------------CC-------------------------TTTG-----GCGGTG--------TTT--------------------------------GTGTTGTTCT-TTGGTTTCTGT--G-TGTTGCGTGTTTATGTAACAAGCGACT---------------------ATTAAAT-AT-----AGTTCCA---C---TACATCCACCT-C--CTCTCCAGAGACCTATCATCTGACCTCGAATGAACTTATACTGGAGACGGCTGTGCGC
droMoj3 scaffold_6496:10723240-10723593 + GCCGAAGGTCAACACCGATGTACAGCCCGTGTTCATACGCTCGCTGAAAGGTAAGAGCCA--------------------------------A-----AC----------------G-CATCGATTTTGTC----TCGTC-----TCGTCGTGTCTCGTTCGACTGAATAGATATCTAAT----------------------------------TGGTTCTATTATT-AGATA--GAACAAAGA--TATTGA--CAATTGTGCAATGCAATG--CGATTGTTTGTC-------GGGATTATGCAATG-------------------------CC-------------------------TCTGGCGTTGCAATG-----CTGTAT--------------------------------GTGCTGTTGT-TGGGT--CTTT--G-TGTTGCGTGTTTATGTAACCATGGACT---------------------ATTGAAA-CTCTTCAACTTC-----C---TCTATCTCCAC-C--TCCTCCAGAGACTTATCACCTGAACTCGAATGAGCTCATACTGGAGACAGCTGTGCGG
droGri2 scaffold_15245:16803327-16803641 - GCCGAAGGTCAACACCGATGTGGAGCCCGTGTTTATACGCTCCCTGAAAGGTAAGAAA--------------------------G-----GCA-----TC----------------C------AATTTGTTTGTGTCGTCCGCATTCGTA-----------------ATG----TCTTATC----------------------------------AGATCTATAAAT-AGA------TC-AAAG-TCATTGA--CGATTGTGCAATGTG-----CAATCATTTGTT-------GGGATTATGCAATG-------------------------CC-------------ATCTTTGTT---GTTG-------------------TTT--------------------------------------TTGT-TGGGT--TCTTGTGTTGCTGCGTGTTTATGTAACAACTATCT---------------------GCTGAAT-GCCTG----------------CCAATCTCCCA-T--TCACGCAGAGAACTATCATCTAAATTCGAATGAACTTATATTGGAGACAGCTGTGAGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GACCAAGGTCAATACGGATGTGCAACCCGTCTTTATTCGCTCTCTGAAAGGTAAGATATTG-----------------------G-----GTA-----TC----------------G------GATGAGTG-------------T----------------------------------------CCG--TGATCG-ATCG------------AATCATCTATAATT-AGCGA-------------TGTGTA--TAATTGTGCAGTGCC-------ATTGACTGCA-------TTCGTTATGCAATG-------------------------CT-------------AT----------TTTG-----GCAACG----------------------------------------------------------------------------TTTTTATGTAACCAGT--------------------------------------------------C---TCGGTGTTTCT-C--TCTCTCAGAGACCTATCACCTGAACACCAACGAACTGATCCTGGAGACAGCTGTGCGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................TTATTCGCTCTCTGAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00201100000000000000
GACCAAGGTCAATACGGATGTGCAACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
GACCAAGGTCAATACGGATGTGCAACCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAACTGATCCTGGAGACA.........2011.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCTATCACCTGAACACC..............................2011.00110000000000000000
.............................TCTTTATTCGCTCTCTGAAAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACGAACTGATCCTGGAGAC..........2211.00110000000000000000
..CCAAGGTCAATACGGATGTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
..........AATACGGATGTGCAACCCGTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGACCTATCACCTGAACA................................2011.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGACCTATCACCTGAACACC..............................2211.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAACTGATCCTGGAGACA.........2111.00101000000000000000
droSec2
GACCAAGGTCAATACGGATGTGCAACCCGTCTTTATTCGCTCTCTGAAAGGTAAGATATTG-----------------------G-----GTA-----TC----------------G------GATGAGTG-------------T----------------------------------------CCG--TGATCG-ATCG------------AATCATCTATAATT-AGCAA-------------TGTGTA--TAATTGTGCAGTGCC-------ATTGACTGCA-------TTCGTTATGCAATG-------------------------TT-------------AT----------TTTG-----GCAACG----------------------------------------------------------------------------TTTTTATGTAACCAGT--------------------------------------------------C---TCGGTGTTTCT-C--TCTCTCAGAGACCTATCACCTGAACACCAACGAACTGATCCTGGAGACAGCTGTGCGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAACTGATCCTGGAGACA.........2112.0021100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTGATCCTGGAGACAGCT......2111.0010100
...CAAGGTCAATACGGATGTGCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAACTGATCCTGGAGA...........1811.0011000
......GGTCAATACGGATGTGCAACCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
......GGTCAATACGGATGTGCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
.....AGGTCAATACGGATGTGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCAACGAACTGATCCTGGAGAC..........2511.0010100
....AAGGTCAATACGGATGTGCAACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACACCAACGAACTGATCCTGGAGAC..........2711.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCCTGGAGACAGCTGTGC..2011.0010100
............TACGGATGTGCAACCCGTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
....AAGGTCAATACGGATGTGCAACCCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACCTGAACACCAACGAAC.......................2111.0011000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAACTGATCCTGGAGACAGCTGTGC..2811.0010100
dm3
GACCAAGGTCAATACGGATGTGCAACCCGTCTTTATACGCTCTCTGAAAGGTAAGATATTG-----------------------G-----GTA-----TC----------------G------GATGAGTG-------------T----------------------------------------TCG--TAATCG-ATCG------------AATCATCTATAATT-AGCAG-------------TGTGTA--TAATTGTGCAGTGCC-------ATTGACTGCA-------TTCGTTATGCAATG-------------------------CT-------------AT----------TTTG-----GCAACG----------------------------------------------------------------------------TTTTTATGTAACCAGT--------------------------------------------------C---TCGGTGTTTCT-C--TCTCTCAGAGACCTATCACCTGAACACCAACGAACTGATCCTGGAGACAGCTGTCCGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.....AGGTCAATACGGATGTGCAACCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CAAGGTCAATACGGATGTGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTGTTTCT-C--TCTCTT....................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCTATCACCTGAACACCAACG..........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACGAACTGATCCTGGAGACAATC......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACCCGTCTTTATACGCTCTCTGAAAGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAACGAACTGATCCTGGAGACAGCT......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CCAAGGTCAATACGGATGTGCAACCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TACGGATGTGCAACCCGTCTTTAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCCTGGAGACAGCTGTC...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GTCAATACGGATGTGCAACCCGTCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTATCACCTGAACACCAACGAA........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ACGGATGTGCAACCCGTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTATCACCTGAACACCAACGAAC.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ATACGGATGTGCAACCCGTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGATCCTGGAGACAGCTGTCC..2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................ACCCGTCTTTATACGCTCTCTGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAACTGATCCTGGAGACAGC.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACACCAACGAACTGATCCTGGA.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGATCCTGGAGACAGCTGTC...2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GATGTGCAACCCGTCTTTATACGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGATCCTGGAGACAGC.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......GGTCAATACGGATGTGCAACCCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAACGAACTGATCCTGGAGAC..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGACCTATCACCTGAACACC..............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCAACGAACTGATCCTGGAGACAATC......2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCTATCACCTGAACACCAAT...........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TTTATACGCTCTCTGAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AAGGTCAATACGGATGTGCAACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..CCAAGGTCAATACGGATGTGCAACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCTATCACCTGAACACCA.............................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AATACGGATGTGCAACCCGTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGGATGTGCAACCCGTCTTTATAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTATCACCTGAACACCAACGAA........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAACTGATCCTGGAGACAGCATC....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGATCCTGGAGACAGCTGT....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GACCAAGGTCAACACGGATGTGCAACCCGTCTTTATTCGCTCTCTGAAAGGTAAGATATTGGGTATTG----------------G-----GTA-----TC----------------G------GATGAGTG-------------T----------------------------------------TCG--AGATCG-ATCG------------AATCATCTATAATT-AGCAA-------------TGTGTA--TAATTGTGCATTGCC-------ATTGACTGCA-------ATTATTATGCAATG-------------------------CT-------------AT----------TCTG-----GCAATG----------------------------------------------------------------------------TTTTTATGTAACCAGT--------------------------------------------------C---TCGGTGTTTCG-C----TCTCAGAGACCTATCACCTAAATACCAACGAACTGATCCTGGAGACAGCTGTGAGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.ACCAAGGTCAACACGGATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTATCACCTAAATACCAACGAACT......................2511.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAACGAACTGATCCTGGAGAC..........2311.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGATCCTGGAGACAGCTGTG...2211.0011000000
..................TGTGCAACCCGTCTTTATTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
GACCAAGGTCAACACGGATGTGCAACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
....AAGGTCAACACGGATGTGCAACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.....................GCAACCCGTCTTTATTCGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAACTGATCCTGGAGACAGCT......2311.0010000100
...CAAGGTCAACACGGATGTGCAACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
....................TGCAACCCGTCTTTATTCGCTCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAACTGATCCTGGAG............1811.0010000010
...........ACACGGATGTGCAACCCGTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.....................GCAACCCGTCTTTATTCGCTCTCTGAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCAACGAACTGATCCTGGAGACA.........2611.0010000100
.ACCAAGGTCAACACGGATGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
...CAAGGTCAACACGGATGTGCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
droYak3
GACCAAGGTCAACACGGATGTGCAACCCGTCTTTATTCGCTCTCTGAAAGGTAAGATTTTGGGTATTG----------------G-----GTA-----TC----------------G------GATGAGTGTG-----------T----------------------------------------TCG--TGATCG-ATCG------------ATTCATCTATAATT-AGCAG-------------TGTGTA--CAATTGTGCAATGCC-------AGTGACTGCA-------ATCATTATGCAATG-------------------------CT-------------AT----------TTTG-----GCAATG----------------------------------------------------------------------------TTTTTATGTAACCAGT--------------------------------------------------C---TCGGTGTTTCT-C----TCTCAGAGACCTATCACCTGAACACCAACGAGCTGATCCTGGAGACAGCTGTGAGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCTATCACCTGAACACC..............................2011.00110000000000
.........................CCCGTCTTTATTCGCTCTCTGAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGCTGATCCTGGAGACA.........2011.00100000010000
GACCAAGGTCAACACGGATGTGCAACCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000000000
....AAGGTCAACACGGATGTGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGAACACCAACGAGCT......................2011.00100000010000
......GGTCAACACGGATGTGCAACCCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGAGCTGATCCTGGAG............1911.00100000010000
........................ACCCGTCTTTATTCGCTCTCTGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000
.ACCAAGGTCAACACGGATGTGCAACCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000000000
.....AGGTCAACACGGATGTGCAACCCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
droEug1
GACCAAGGTCAACACGGATGTGCAACCCGTCTTTATTCGCTCTCTGAAAGGTAAGATATTG-----------------------G-----GTA-----AC----------------G------GATGAGTA-------------T----------------------------------------TCG----ATCG-ATCG------------AATCATCTATATTT-AGCAAT-----CGACA--TGTGTA--TGATTGTGCAATGCC-------ATTGATTGCA-------ATCATTATGCAATA-------------------------TT-------------TT----------TTT------GCACTG-----C----------------------------------------------------------------------TTTTTATATAACCAGT--------------------------------------------------C---TCGGTGTTTCT-C----TCTTAGAGACCTATCACCTGAACACCAATGAGCTGATCCTGGAGACAGCTGTTAGASizeHit CountTotal NormTotal
No Reads
droBia1
GGCGAAGGTCAACACGGATGTGCAGCCCGTCTTCATTCGCTCTCTTAAAGGTAAGGTATTG-----------------------G-----GTA-----TCG-------------ATG------GATGAGTGTG-----------T----------------------------------------CCGATCGATCGGATCG------------AACCGCTTATATTT-AGCAAT-----CGAGA--TGTGTA--TGATTGTGCAATGCC-------ATTGATCGCC-------GCCCTTATGCAATG------G------------------CT-------------TT-T--------TTTC-----GGGATGTGCT------------------------------------------------------------------------CTGTTATGTAACCCAT--------------------------------------------------C---TCGGTGTTTCT-CTCTCTCGTAGAGACCTATCACCTGAACACCAACGAGCTGATCCTAGAGACGGCTGTGAGGSizeHit CountTotal NormTotal
No Reads
droTak1
GACGAAGGTCAACACCGATGTCCAACCCGTCTTTATTCGCTCTCTGAAAGGTAAGATATTC-----------------------G-----GTA-----TC----------------G------GATGAGTGTG-----------T----------------------------------------TCGATCGATCG-ATCG------------GATCGTCTATATTT-AGCAAT-----CGACAACAGTGTA--TGATTGTGCAATGCC-------AATGGTCGCA-------GCCATTATGCAATG-----------------------------------------------------------------------------------------------------------------------------------------------TTTTTATGCAACCCGT--------------------------------------------------CTTCTCGGTGTTTTT-C--TCTCACAGAGACCTATCACCTGAACACCAACGAGCTGATCCTGGAGACAGCTGTGAGGSizeHit CountTotal NormTotal
No Reads
droEle1
GCCGAAGGTCAACACGGATGTACAGCCCGTCTTTATTCGCTCTTTGAAAGGTAAGATATTG-----------------------G-----G---------------------------------ATG------------------------------------------------------------------TTA-AACA------------ATCCATCTATAATT-AGCCAT-----CAACG-TTGTGTATCTGGTTGTGCAATGCC-------ATTGATACAA-------TCCATTATGCAATG-------------------------GG-------------TTCTTTCTT---GTTG-----GCAATG----------------------------------------------------------------------------TTTTTATGTAACCCGT--------------------------------------------------CT-CTCGGTGTTTCT-C----TCCCAGAAACCTACCACCTGAACACCAACGAGCTAATCCTGGAGACGGCCGTAAGGSizeHit CountTotal NormTotal
No Reads
droRho1
GCCGAAGGTCAACACGGATGTTCAGCCCGTCTTTATTCGGTCTCTCAAAGGTAAGATCTTC-----------------------G-----GTG-----TC----------------G------GATGAGTG-------------------------------------------------------------ATCA-ATCG------------ATTCATCTATAATT-AGCCGT-----AAACA-TTGTGTACACTATTGTGCAATGCC-------ATTGATACGA-------GCCATTATGCAATG-------------------------GG-------------TTCTTTCTC---TTTG-----ACAATG----------------------------------------------------------------------------TTTTTATGTAACAAGT--------------------------------------------------C---TCGGTGTTTCC-C----TACCAGAAACCTACCACCTGAACACCAACGAACTGATCCTGGAGACGGCCGTGAGGSizeHit CountTotal NormTotal
No Reads
droFic1
GCCGAAGGTCAACACGGATGTGCAGCCCGTCTTCATTCGCTCGCTGAAAGGTAAGATCTTG-----------------------G-----GTA-----TC----------------G------GATGGGAT-------------A----------------------ATAGCT-----AT-----CCGATCGATCG-ATCGATCGCTAGATCCGTCCGTCTATTATT-AGCCAA-----CGACA-TTGCCTT--TGGTTGTGCAATGCC-------ATTGACTGCCGTCTACGGCCATTATGCAATG-------------------------GC-------------TTCTTTT-C---TATG-----GCACTG----------------------------------------------------------------------------ACTTTACGTAACCCGT--------------------------------------------------A---TCGGTGTTTCT-C----TCCCAGAAACCTACCACCTGAACACCAACGAGCTGATCCTGGAGACGGCGGTGCGCSizeHit CountTotal NormTotal
No Reads
droKik1
GCCAAAGGTCAACACGGATGTGCAGCCCGTCTTTATACGCTCTCTGAAAGGTAAGATCTCG-----------------------------------------------------CTG------GC--AGCG------------------------------------------------------TCGATCGATCG-ACCG------------ATTGATCTATATTT-AGAGATCCATCCCACA-TTGTGTG--TGATTGTGCAATGCCATCATCCATCGATCGTT-------TCCATTATGCAATG-------------------------AG-------------T-----------------------GTG----------------------------------------------------------------------------TGCTTACGTAACCGGA--------------------------------------------------C---TCGGTGCTCTT-C--TCCTCTAGAAACCTATCATCTTAACACCAACGAGTTGATCCTGGAGACAGCCGTGCGTSizeHit CountTotal NormTotal
No Reads
droAna3
GCCTAAGGTGAACACGGACGTGCAGCCCGTCTTTATTCGCTCTCTGAAAGGTAAGAGGTC---------------------TTCG-----GTT-----CGGGCACTGCACCCTGTTCCCA---GATACC---------------------------------------------------------------------------------------TCTCTAGAATTGA----------------------G--CAATTGTATAATCCC-------ATC---AGAA-------CCCCTTACGCAACAAATGGTGTATTCTAATCATGAACGTTTGTTTCGCTAAGGGTTCTGGATTTCGATTTGAGG-----GA--------TTTGGGGATCGATGGGACTGTTCCAGTATCACAAAGTGTTACTAT-T---------------------TGGTTATATAACCAGT--------------------------------------------------T---T--------------TTTTTTAGAAACATATCATCTAAACACCAATGAGCTGATTCTGGAGACAGCAGTGCGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......GTGAACACGGACGTGCAGCCCGTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25119.00190000019
.......GTGAACACGGACGTGCAGCCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22111.00111000010
......GGTGAACACGGACGTGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2117.007400003
.......GTGAACACGGACGTGCAGCCCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2417.007200005
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTGGAGACAGCAGTGCGC2217.007300121
.......GTGAACACGGACGTGCAGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.006000006
......GGTGAACACGGACGTGCAGCCCGTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.005200003
.....AGGTGAACACGGACGTGCAGCCCGTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2715.005000014
.......GTGAACACGGACGTGCAGCCCGTCTTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2814.004000004
.......GTGAACACGGACGTGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.004200011
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTGGAGACAGCAGTGCG.2113.003000021
......GGTGAACACGGACGTGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003000003
..........AACACGGACGTGCAGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003000003
GCCTAAGGTGAACACGGACGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003100110
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATATCATCTAAACACCAATGAGC.......................2513.003000102
....AAGGTGAACACGGACGTGCAGCCCGTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.003000003
.......GTGAACACGGACGTGCAGCCCGTCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.003000003
.....AGGTGAACACGGACGTGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003100002
........TGAACACGGACGTGCAGCCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002100001
.....AGGTGAACACGGACGTGCAGCCCGTCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002000002
.....AGGTGAACACGGACGTGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002100001
........................GCCCGTCTTTATTCGCTCTCTGAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002100001
......GGTGAACACGGACGTGCAGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTGATTCTGGAGACAGCAGTGCGC2712.002000101
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCTGATTCTGGAGAC..........1812.002100001
.......GTGAACACGGACGTGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000020
......GGTGAACACGGACGTGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000020
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGCTGATTCTGGAGACA.........2012.002100001
.......GTGAACACGGACGTGCAGCCCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000002
.........GAACACGGACGTGCAGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002100001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTCTGGAGACAGCAGTGCG.2211.001000001
..............CGGACGTGCAGCCCGTCTTTATTCGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.CCTAAGGTGAACACGGACGTGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGAGCTGATTCTGGAGACAG........2411.001100000
.....AGGTGAACACGGACGTGCAGCCCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..........AACACGGACGTGCAGCCCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
...TAAGGTGAACACGGACGTGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
......................................................................................................................................................................................................................................................................................................................................................................GATTTGAGG-----GA--------TTTGGGGATCGATGG....................................................................................................................................................................................................2611.001000001
.........GAACACGGACGTGCAGCCCGTCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
...........................CGTCTTTATTCGCTCTCTGAAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAATGAGCTGATTCTGG..............1911.001100000
....AAGGTGAACACGGACGTGCAGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGGAGACAGCAGTGCGC2111.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTGGAGACAGCAGTGC..2011.001000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGCTGATTCTGGAGACAGCAGTGC..2711.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGCTGATTCTGGAGAC..........1911.001000010
...........ACACGGACGTGCAGCCCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAATGAGCTGATTCTGGAGACAGCA......2811.001000001
..............CGGACGTGCAGCCCGTCTTTATTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...TAAGGTGAACACGGACGTGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATTCTGGAGACAGC.......1811.001000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAGCTGATTCTGGAGACAGCAGTGC..2811.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGAGCTGATTCTGGAGACAGCA......2511.001000001
...............GGACGTGCAGCCCGTCTTTATTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGAGACAGCAGTGCGC1911.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGAGACAGCAGTGCG.1811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCTGATTCTGGAGACAGCAGTGCG.2711.001100000
....AAGGTGAACACGGACGTGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAGCTGATTCTGGAGACA.........2111.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACCAATGAGCTGATTCT................2011.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATTCTGGAGACAGCAGTGCG.2311.001000010
........TGAACACGGACGTGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
..........AACACGGACGTGCAGCCCGTCTTTAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..................CGTGCAGCCCGTCTTTATTCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.......................AGCCCGTCTTTATTCGCTCTCTGAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
........................GCCCGTCTTTATTCGCTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.........................CCCGTCTTTATTCGCTCTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..........AACACGGACGTGCAGCCCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.........GAACACGGACGTGCAGCCCGTCTTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.....AGGTGAACACGGACGTGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTGATTCTGGAGACAGCA......2111.001100000
......GGTGAACACGGACGTGCAGCCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGGAGACAGCAGTGCG.2011.001000001
................GACGTGCAGCCCGTCTTTATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATATCATCTAAACACCAATGAGC.......................2611.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCAATGAGCTGATTCTGGAGA...........2411.001000010
.........GAACACGGACGTGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
....AAGGTGAACACGGACGTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGCTGATTCTGGAGACAGCAG.....2411.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTCTGGAGACAGCAGTGCGC2311.001100000
........................GCCCGTCTTTATTCGCTCTCTGAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCAATGAGCTGATTCTGGAGACAGC.......2811.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTGATTCTGGAGACAGC.......2011.001000010
....AAGGTGAACACGGACGTGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACCAATGAGCTGATTCTGGAGA...........2511.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATCATCTAAACACCAATGAGCT......................2511.001100000
GCCTAAGGTGAACACGGACGTGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAATGAGCTGATTCTGGAGAC..........2311.001100000
droBip1
GCCGAAGGTGAACACGGACGTGCAGCCCGTCTTCATTCGTTCTCTCAAAGGTAGGGGATC---------------------TTCG-----ATT-----CCGGCACGAGACCCTGTTCCCA---GACACC------------------------------------------------------------------T-CTCG------------A------------------------------------GG--CAATTGTATAATCCC-------ATTAGTAGAA-------CCCCTTACGCAACAAATGATTCATTCTTGTAAAGAGCATTTGTTTCGCAAAGGCTTCCTTTTTGGGATTGATGG-----AT--------TTTCGAGTTCGATGGGACTGTTCCGGTATCAGAAAGGGTTACTGTTT---------------------TGGTTTTCTAACCAGT--------------------------------------------------T---T--------------GTTTTCAGAAACTTATCATCTAAACACCAACGAGCTGATTCTGGAGACAGCCGTGCGCSizeHit CountTotal NormTotal
No Reads
dp5
GGCGAAGGTCAACACCGATGTCCAGCCCGTGTTCATACGTTCGCTAAAAGGTAAGGGATCG--CATCGAGCAGGCATCACAATCGTCTCCTCA-----TC----------------G------GATGAGAG-------------A-----------------------------TCAGATCAGATCAG--TGAGA-----G------------ATCGATCTATACTT-AGAAG--CATCCGACA-TTATTCG--TGGTTGTGCAATGCC-------ATTAAT-------------CGTTATGCAAGCCATTATG------------------TT-------------GT------T---TGTG-----GTGATGTGATGTGATAT--------------------------------GT-------------CTTCTCT--C-TGCAGCATGCT----------------GAATTCTGCATTCGTTGCATAATACAAATCTCTTCCACCTTCTTCC---------CTTCCC-C--ACTTAAAGACACCTATCATCTGAACACCAATGAGCTAATTCTGGAGACGGCGGTGCGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGACACCTATCATCTGAACACC..............................2313.0031101000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAACACCAATGAGCTAA....................2012.0020000011000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAACACCAATGAGCTAATT..................2312.0020000000020
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAGCTAATTCTGGAGACG.........2112.0020001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAACACCAATGAGCTAATTC.................2412.0020200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACACCTATCATCTGAAC.................................1911.0010001000000
..................TGTCCAGCCCGTGTTCATACGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010000
................GATGTCCAGCCCGTGTTCATACGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTATCATCTGAACACCAATG..........................2111.0010000010000
.............ACCGATGTCCAGCCCGTGTTCATAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGGAGACGGCGGTG...1811.0010100000000
....................................................................................................................................................................................................................................................................................................................ATTATG------------------TT-------------GT------T---TGTG-----GTGATGTGA........................................................................................................................................................................................................................2411.0010000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGCTAATTCTGGAGACG.........2011.0010100000000
.................ATGTCCAGCCCGTGTTCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTAATTCTGGAGACGGC.......1911.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACACCAATGAGCTAATTCT................2111.0010001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAGCTAATTCTGGAGACGGC.......2311.0010001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACACCAATGAGCTAAT...................2011.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCATCTGAACACCAATGA.........................2011.0010000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGGAGACGGCGGTGCGA2011.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGCTAATTCTGGAGACGGCG......2311.0010000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGACACCTATCATCTGAAC.................................2111.0010001000000
....AAGGTCAACACCGATGTCCAGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACACCTATCATCTGAACACC..............................2211.0010001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTATCATCTGAACACCAATGAG........................2511.0010100000000
............CACCGATGTCCAGCCCGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCATCTGAACACCAATGAGCT......................2311.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTATCATCTGAACACCA.............................2011.0010100000000
..............CCGATGTCCAGCCCGTGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010000
...GAAGGTCAACACCGATGTCCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAATGAGCTAATTCTGG..............2011.0010000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTATCATCTGAACACCAATGAGCT......................2511.0010001000000
..........AACACCGATGTCCAGCCCGTGTTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001000000
.........CAACACCGATGTCCAGCCCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCATCTGAACACCAATGA.........................2111.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCTGAACACCAATGAGCTA.....................2311.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTATCATCTGAACACCAATGAGC.......................2611.0010001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTGAACACCAATGAGCTAAT...................2311.0010001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCTAATTCTGGAGACG.........1911.0010100000000
..............CCGATGTCCAGCCCGTGTTCATACGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000001000
....AAGGTCAACACCGATGTCCAGCCCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
......................................................................................................................................................................................................................................................................................................................TATG------------------TT-------------GT------T---TGTG-----GTGATGTG.........................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCATCTGAACACCAATGAGCTAATT..................2711.0010100000000
GGCGAAGGTCAACACCGATGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACCTATCATCTGAACACC..............................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGACACCTATCATCTGAACACCA.............................2511.0010001000000
....AAGGTCAACACCGATGTCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000000
...........ACACCGATGTCCAGCCCGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010000
..................................ATACGTTCGCTAAAAGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.2011000000000
droPer2
GGCGAAGGTCAACACCGATGTCCAGCCCGTGTTCATACGTTCGCTAAAAGGTAAGGGATCG--CATCGAGCAGGCATCACAATCGTCTCCTCA-----TC----------------G------GATGAGAG-------------A-----------------------------TCAGATCAGATCAG--TGAGA-----G------------ATCGATCTATACTT-AGAAG--CATCCGACA-TTATTCG--TGGTTGTGCAATGCC-------ATTAAT-------------CGTTATGCAATTCATTATG------------------TT-------------GT------T---TGTG-----GTGATGTGATGTGATAT--------------------------------GT-------------CTTCTCT--C-TGCAGCATGCT----------------GAATTCTGCATTCGTTGCATAATAGAAATCTCTTCCACCTTCTTCC---------CTTCCC-C--ACTTAAAGACACCTATCATCTGAACACCAATGAGCTGATTCTGGAGACGGCGGTGCGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTGATTCTGGAGACGGC.......2013.003000003
...........................................................................................................................................................................................................................................................................................................................................................GT------T---TGTG-----GTGATGTGATGTGA...................................................................................................................................................................................................................2111.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACACCAATGAGCTGAT...................1911.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATTCTGGAGACGGCGGTGCGA2511.001000001
........................................................................................................................................................................................................................................................................................................................TG------------------TT-------------GT------T---TGTG-----GTGATGTGA........................................................................................................................................................................................................................2011.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTGATTCTGGAGACGGCGGTGCG.2611.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAACACCAATGAGCTGATT..................2211.001000100
.........................................................................................................................................................................................................................................................................................................................G------------------TT-------------GT------T---TGTG-----GTGATGTGATGTGATAA--------------------------------................................................................................................................................................................................2711.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTATCATCTGAACACCAAT...........................2011.001000001
..............CCGATGTCCAGCCCGTGTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCTGAACACCAATGAGCTGAT...................2411.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTCTGGAGACGGCGGTGCG.2211.001000001
droWil2
GCCAAAGGTCGATACGGATGTGCAACCAGTCTTCATTCGCTCTCTAAAAGGTAAGC------------------------------------------------------------------------------------------------------------------------------------------AG-GCAG------------ACGCATTGACGTTC-AAAAT-------------TAGACA--CCATTATGCAATGAC-------TTCCATT--A-------GTCATTGTGCAACA-------------------------AT-------------CT----------TGTC-----ATTCCG----------------------------------------------------------------------------AACTTATGTAACATGT--------------------------------------------------G---TTGTTATTTCTGCTATCTATCAGAGACCTATCATCTCAACAGTAATGAATTGATTTTGGAGACCGCTGTGCGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...AAAGGTCGATACGGATGTGCAACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2418.00870100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTAATGAATTGATTTTGGAGAC..........2516.00660000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAATGAATTGATTTTGGAGACC.........2415.00550000
GCCAAAGGTCGATACGGATGTGCAACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2715.00550000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAATTGATTTTGGAGACC.........2114.00440000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGATTTTGGAGACC.........1814.00440000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATTTTGGAGACCGCTGTGCGC2513.00330000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGAATTGATTTTGGAGACCG........2412.00220000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATTGATTTTGGAGACC.........1912.00220000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGTAATGAATTGATTTTGGAGAC..........2712.00220000
GCCAAAGGTCGATACGGATGTGCAACCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACAGTAATGAATTGATTTTGGAGAC..........2811.00110000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGAATTGATTTTGGAGACCGCT......2611.00110000
...AAAGGTCGATACGGATGTGCAACCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
...........ATACGGATGTGCAACCAGTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
....AAGGTCGATACGGATGTGCAACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
....AAGGTCGATACGGATGTGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.............ACGGATGTGCAACCAGTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATTGATTTTGGAGACCGCTGTGCGC2911.00110000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGTAATGAATTGATTTTGGAGACC.........2711.00110000
........TCGATACGGATGTGCAACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGAATTGATTTTGGAGACC.........2311.00110000
.....AGGTCGATACGGATGTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
............TACGGATGTGCAACCAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGATTTTGGAGACCGC.......2011.00110000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTAATGAATTGATTTTGGAGACC.........2611.00110000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATTGATTTTGGAGACCGCTGTGCGC2811.00110000
..........GATACGGATGTGCAACCAGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTATCATCTCAACAGTAA............................2111.00101000
......GGTCGATACGGATGTGCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGAATTGATTTTGGAGA...........2111.00100100
...AAAGGTCGATACGGATGTGCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTAATGAATTGATTTTGGAGACC.........2511.00110000
............................GTCTTCATTCGCTCTCTAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
.....AGGTCGATACGGATGTGCAACCAGTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATTGATTTTGGAGACCGCTGT....2511.00101000
droVir3
GCCGAAGGTCAACACCGATGTACAACCTGTTTTCATACGCTCTCTGAAAGGTAAGAGCCA---------------------TTCGTCTATTCGTCTATTC-----------GCCTAGGCA---GATGCCTG-----------------------------------------------ACC---------AGA---------------------TAGATCTATGAAT-AGA------TC-AAAG-CTATAGA--CGATTGTGCAATGCA-------ATTGTTTGTCTTGTC--GGGATTATGCAATA-------------------------CC-------------------------TTTG-----GCGGTG--------TTT--------------------------------GTGTTGTTCT-TTGGTTTCTGT--G-TGTTGCGTGTTTATGTAACAAGCGACT---------------------ATTAAAT-AT-----AGTTCCA---C---TACATCCACCT-C--CTCTCCAGAGACCTATCATCTGACCTCGAATGAACTTATACTGGAGACGGCTGTGCGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...GAAGGTCAACACCGATGTACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003002000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTGACCTCGAATGAACTTA....................2212.002000000000000000002000000000000000000000000000000000000000000000
..............CCGATGTACAACCTGTTTTCATACGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002000000000000000001100000000000000000000000000000000000000000000
...GAAGGTCAACACCGATGTACAACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002001000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTATCATCTGACCTCGAAT...........................2212.002000000000000000001000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAACTTATACTGGAGA...........1912.002002000000000000000000000000000000000000000000000000000000000000
................GATGTACAACCTGTTTTCATACGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002002000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTATCATCTGACCTCG..............................1912.002000000000000001100000000000000000000000000000000000000000000000
.....AGGTCAACACCGATGTACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000000000000000001000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCATCTGACCTCGAATGAACT......................2312.002001000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGACCTCGAATGAACT......................1912.002000000000000000011000000000000000000000000000000000000000000000
...............................TTCATACGCTCTCTGAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002001000000000000000100000000000000000000000000000000000000000000
..CGAAGGTCAACACCGATGTAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000001100000000000000000000000000000000000000000000
........................ACCTGTTTTCATACGCTCTCTGAAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
.....AGGTCAACACCGATGTACAACCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCTGACCTCGAATGAACT......................2211.001000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCTATCATCTGACCTCGAAT...........................2311.001000000000000000001000000000000000000000000000000000000000000000
..................TGTACAACCTGTTTTCATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTGACCTCGAATGAACT......................2011.001000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGACCTCGAATGAACTTATACTGGA.............2611.001000000000000001000000000000000000000000000000000000000000000000
.CCGAAGGTCAACACCGATGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000010000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTATCATCTGACCTCGAATGAAC.......................2411.001000000000000000001000000000000000000000000000000000000000000000
................GATGTACAACCTGTTTTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
...GAAGGTCAACACCGATGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.......................AACCTGTTTTCATACGCTCTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
................GATGTACAACCTGTTTTCATACGCTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCTATCATCTGACCTCG..............................2111.001000000000000000000010000000000000000000000000000000000000000000
GCCGAAGGTCAACACCGATGTACAACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTCGAATGAACTTATACT................2111.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTGGAGACGGCTGTGCG.2011.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................AGGCA---GATGCCTG-----------------------------------------------ACC---------AGA---------------------...........................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
..................................ATACGCTCTCTGAAAGGTAAGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
.CCGAAGGTCAACACCGATGTAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTATCATCTGACCTCGAATGAA........................2411.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGACCTATCATCTGACCTCG..............................2211.001000000000000000001000000000000000000000000000000000000000000000
GCCGAAGGTCAACACCGATGTACAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGAGACGGCTGTGCGC1911.001000000010000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCATCTGACCTCGAATG..........................1911.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCTCGAATGAACTTATACT................2211.001001000000000000000000000000000000000000000000000000000000000000
...........................TGTTTTCATACGCTCTCTGAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGAACTTATACTGGAGACGGC.......2411.001000000000000000001000000000000000000000000000000000000000000000
..........AACACCGATGTACAACCTGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGAACTTATACTGGAGACG.........2211.001000000000000000000010000000000000000000000000000000000000000000
................GATGTACAACCTGTTTTCATACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..............CCGATGTACAACCTGTTTTCATACGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..........AACACCGATGTACAACCTGTTTTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...........ACACCGATGTACAACCTGTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGACCTCGAATGAACTT.....................2011.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATACTGGAGACGGCTGTGCG.2211.001001000000000000000000000000000000000000000000000000000000000000
............CACCGATGTACAACCTGTTTTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000010000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGACCTCGAATGAACTTAT...................2011.001000000000000000000000100000000000000000000000000000000000000000
.....................ACAACCTGTTTTCATACGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCTGACCTCGAATGAACT......................2111.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCATCTGACCTCGAATGAA........................2111.001000000000000001000000000000000000000000000000000000000000000000
....AAGGTCAACACCGATGTACAACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
...................GTACAACCTGTTTTCATACGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGACCTCGAATGAACTTA....................2011.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACTGGAGACGGCTGTGCGC2211.001100000000000000000000000000000000000000000000000000000000000000
..................TGTACAACCTGTTTTCATACGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGACCTCGAATGAACTTATACTGGA.............2811.001000000000000000001000000000000000000000000000000000000000000000
............................GTTTTCATACGCTCTCTGAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................ACCTGTTTTCATACGCTCTCTGAAAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000000000000000000000000000000000000000000000000000000000000
droMoj3
GCCGAAGGTCAACACCGATGTACAGCCCGTGTTCATACGCTCGCTGAAAGGTAAGAGCCA--------------------------------A-----AC----------------G-CATCGATTTTGTC----TCGTC-----TCGTCGTGTCTCGTTCGACTGAATAGATATCTAAT----------------------------------TGGTTCTATTATT-AGATA--GAACAAAGA--TATTGA--CAATTGTGCAATGCAATG--CGATTGTTTGTC-------GGGATTATGCAATG-------------------------CC-------------------------TCTGGCGTTGCAATG-----CTGTAT--------------------------------GTGCTGTTGT-TGGGT--CTTT--G-TGTTGCGTGTTTATGTAACCATGGACT---------------------ATTGAAA-CTCTTCAACTTC-----C---TCTATCTCCAC-C--TCCTCCAGAGACTTATCACCTGAACTCGAATGAGCTCATACTGGAGACAGCTGTGCGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................GTACAGCCCGTGTTCATACGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002100001
.....................................CGCTCGCTGAAAGGTAAGAGCCA--------------------------------A-----AC----------------G-C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
...........................CGTGTTCATACGCTCGCTGAAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTATCACCTGAACTCGAATGAGC.......................2611.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----C---TCTATCTCCAC-C--TCCTCCAGAGA...............................................2511.001001000
GCCGAAGGTCAACACCGATGTAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..................................ATACGCTCGCTGAAAGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.251000001
droGri2
GCCGAAGGTCAACACCGATGTGGAGCCCGTGTTTATACGCTCCCTGAAAGGTAAGAAA--------------------------G-----GCA-----TC----------------C------AATTTGTTTGTGTCGTCCGCATTCGTA-----------------ATG----TCTTATC----------------------------------AGATCTATAAAT-AGA------TC-AAAG-TCATTGA--CGATTGTGCAATGTG-----CAATCATTTGTT-------GGGATTATGCAATG-------------------------CC-------------ATCTTTGTT---GTTG-------------------TTT--------------------------------------TTGT-TGGGT--TCTTGTGTTGCTGCGTGTTTATGTAACAACTATCT---------------------GCTGAAT-GCCTG----------------CCAATCTCCCA-T--TCACGCAGAGAACTATCATCTAAATTCGAATGAACTTATATTGGAGACAGCTGTGAGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCTAAATTCGAATGAACTTATATTG...............2811.00110

Generated: 05/18/2015 at 01:52 PM