ID:

dsi_23906

 Coordinate:

2l:19576281-19576430 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.3 -15.6

Flybase annnotation

CDS [2l_19576431_19576587_-]; exon [2l_19576431_19576923_-]; intron [2l_19574859_19576430_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GTCCACCACCTCCTCGCACGCGGTCAAGGACTGCTACAGTCGAGTGCAAGGTAATTTTGGCGAAAAACCAGATAGCACTCAGAATGCACTGGCAAAAAGGGGGCGAGATTAAAACCGGGCGCGTTTCTCACTTGTTTTCGTGTATTGCGTGTGTTGTTTGTTGTTTTTGCAACCATTTATAAATAGCCAGCCTGATTTCTTGGCCCCATGTGCATAAGTGTGTGTGTGTGCGTGTGTTTGTGTGGGGAAC
***********************************************************************************************************..(((((.(((((((((....(((........)))....))))))........))).))))).....**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 M023
head
 M053
female body
 SRR618934
dsim w501 ovaries
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
..............CGCACGCGGTCAAGGACT.......................................................................................................................................................................................................................... 18 0 1 4.00 4 2 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................GTTTGTTGTTTTTGCAACC............................................................................ 19 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
...............GCACGCGGTCAAGGACTG......................................................................................................................................................................................................................... 18 0 1 3.00 3 0 1 2 0 0 0 0 0 0 0 0
......................GTCAAGGACTGCTACAGT.................................................................................................................................................................................................................. 18 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0
..............CGCACGCGGTCAAGGACTGC........................................................................................................................................................................................................................ 20 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
...............GCACGCGGTCAAGGACTGC........................................................................................................................................................................................................................ 19 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
........................CAAGGACTGCTACAGTCGAGT............................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............CGCACGCGGTCGAGGACTGC........................................................................................................................................................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................AAGGACTGCTACAGTCGAGTG............................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...CACCACCTCCTCGCACGCGGTCAAGGA............................................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............CGCACGCGGTCAAGGACTGCTACAGG.................................................................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......ACCTCCTCGCACGCGGTCT................................................................................................................................................................................................................................ 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...............GCACCCGGTCAAGGACTGC........................................................................................................................................................................................................................ 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....................GGTCAAGGACTGCTACAGTCGAGT............................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........................CAAGGACTGCTACAGTCGAGTGT........................................................................................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................ATTAAAACCGGGCGCGTT............................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
............................GACTGCTACAGTCGAGTGCAAG........................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GTGCGTGTGTTTGTGTGGGG... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..........TCCTCGCACGCGGTCAAGGAC........................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................................GCTACAGTCGAGTGCAAG........................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................TGTTGTTTGTTGTTTTTGCAA.............................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.............................ACTGCTACAGTCGAGTGCAA......................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
..................................................................................................................................................................................................................TGCATAAGTGTGTGTGTGTGC................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......................GTCAAGGACTGCTACAGTCGA............................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..............CGCACTCGGTCAAGGACTGCTACAG................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............CGCACGCGGTCAAGGACTGCT....................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................GGTCAAGGACTGCTACAGTCGA............................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TGTGCGTGTGTTTGTGTGG..... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..............CGCACGCGGTCAAGGACTGCTACAGT.................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................ACAAGGACTGCTACAGTCGAGTGCAAGA....................................................................................................................................................................................................... 28 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.....................GGTCAAGGACTGCTACAGT.................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.....................GGTCAAGGACTGCTACAGTCGAGG............................................................................................................................................................................................................. 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
............CTCGCACGCGGTCAAGGACTGCTACAGT.................................................................................................................................................................................................................. 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
............CTCGCACGCGGTCAAGGACTGC........................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
......................................................TTTTGGGGAAATACCAGCTAGCA............................................................................................................................................................................. 23 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................AATAGCCAGGCTGATATC................................................... 18 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
...................................ACAGTCGAGTGCAAGAAAAGT.................................................................................................................................................................................................. 21 3 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CGTGCGTTCGTCTGGGGAA. 19 3 16 0.13 2 0 0 0 0 0 0 0 0 0 2 0
..................................................................................................................................................................................................................TGCATAAGTGTGTGTGTGC..................... 19 1 12 0.08 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................................TGTGTGCGTGTGTTTGTG........ 18 0 18 0.06 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................AGACCGGCCGCGTTTC........................................................................................................................... 16 2 19 0.05 1 0 0 0 0 0 0 0 0 0 0 1
....................................................................................................................................................................................TAATAGCCAGGCTGATATC................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CAGGTGGTGGAGGAGCGTGCGCCAGTTCCTGACGATGTCAGCTCACGTTCCATTAAAACCGCTTTTTGGTCTATCGTGAGTCTTACGTGACCGTTTTTCCCCCGCTCTAATTTTGGCCCGCGCAAAGAGTGAACAAAAGCACATAACGCACACAACAAACAACAAAAACGTTGGTAAATATTTATCGGTCGGACTAAAGAACCGGGGTACACGTATTCACACACACACACGCACACAAACACACCCCTTG
****************************************************************************..(((((.(((((((((....(((........)))....))))))........))).))))).....*********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 O001
Testis
...................CGCCAGTTCCTGACGATGTCA.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0
............GAGCGTGCGCCAGTTCCTGAC......................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................TCCTGACGATGTCAGCTCACGTTCCAT..................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................CGGGGTACACGGGTTCACAC............................ 20 2 1 1.00 1 1 0 0 0 0 0 0 0
..........AGGAGCGTGCGCCAGTTCCTG........................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0
.........................................................................TGGTGAGTCTTACGT.................................................................................................................................................................. 15 1 8 0.25 2 0 0 0 0 2 0 0 0
..................................ATGTCAGATCACGTT......................................................................................................................................................................................................... 15 1 4 0.25 1 0 0 0 0 0 1 0 0
....................................................................................................................................................................................GATATCGGTCGGACT....................................................... 15 2 20 0.15 3 0 3 0 0 0 0 0 0
..........AGGTGCGTGCGCCAG................................................................................................................................................................................................................................. 15 1 8 0.13 1 0 0 0 0 1 0 0 0
.............AGCGTGCGCGAGTTC.............................................................................................................................................................................................................................. 15 1 8 0.13 1 0 1 0 0 0 0 0 0
......................................................................................................AGCTCCAAATTTGGCCCGC................................................................................................................................. 19 3 9 0.11 1 0 0 0 0 0 0 1 0
...................................................................................................................GCCTGCGCAAAGAGTGC...................................................................................................................... 17 2 16 0.06 1 0 0 0 0 1 0 0 0
...............................................................................................................................AGTGAACCAAAGCCCAT.......................................................................................................... 17 2 20 0.05 1 0 1 0 0 0 0 0 0
.......................................................................................................................GCGCAAAGAGAGAAAAAA................................................................................................................. 18 2 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:19576231-19576480 - dsi_23906 GTCCACCA------CCTCCTCGCACGCGGTCAAGGACTGCTACAGTCGAGTGCAAGGTAATT-TT--------------------------------------GGCGA-------------AA-AA-----------CCAGA----------------------------------------------------------------TAGCACTCAG------AATGCACT---GGCAA-----------------AA--AG---------GGGGCGAGATTAAAA-----------------------------------------------------------------------------------------------------------------------CC----GGGCGCGTTTCTCAC--------------TTGTTTTCGTG------TA----TTGCGTGTGTTGTT-TGTTGTTTTTGCAACCATTTATAAATAGCC--AGCCTGATT-------TCTTGG-----------CCCCATGTG-----------------------------CATAAGTGTGTGTG-----------TGTGCGT----GTGTTTGT--GT-GGGGAAC
droSec2 scaffold_7:3696945-3697193 - GTCCACCA------CCTCCTCGCACGCGGTCAAGGACTGCTACAGTCGAGTGCAAGGTAATT-TTT-------------------------------------GGCGA-------------AA-AA-----------CCAGA----------------------------------------------------------------TAGCACTCAG------AATGCACT---GGCAA-----------------AA--AG---------GGGGCGAGTTTAAAAC-----------------------------------------------------------------------------------------------------------------------C----AGGCGCGTTTCTCAC--------------TTGTTTTCGTG------TA----TTGCGTGTGTTGTT-TTTTGTTTTTGCAACCATTTATAAATACCC--AGCCTGATT-------TCTTGG-----------CCCCATGTG-----------------------------CATAAGTGTGTGTG-------------TGCGT----GTGTTTGT--GT-GGGGAAC
dm3 chr2L:20084378-20084627 - GTCCACCA------CTTCCTCACACGCGGTCAAGGACTGCTACAGTCGAGTGCAAGGTAATT-TTT-------------------------------------GGCGA-------------AA-AA-----------ACAGA----------------------------------------------------------------TAGCGCTCAG------AATGCACT---GGCAA-----------------AA--AA---------GGGGCGAGATTGAAAG----------------------------------------------------------------------------------------------------------------------C-----AGACGCGTTTCTCAC--------------TTGTTTTTGTG------TA----TTGCGTGTGTTGTTTTGTTGTTTTTGCAACCATTTATAAATAGCC--AGCCTGATT-------TCTTAG-----------CCCCATGTG-----------------------------CATAAGTGTGTGTG-------------TGCGT----GTGTGTGT--GT-GTAGAAC
droEre2 scaffold_4845:4245708-4245967 + GTCCACCA------ACTCCTCACACGCGGTCAAGGACTGCTACAGTCGAGTGCAAGGTAATT-TTT-------------------------------------GGCGA-------------CA-AA-----------CAATAT-----AGC--------TTCGT-------------------------------------ACACAAAGCGCGCAA------AATGCACT---GTCAA-----------------AA--AAG--------GGGGAGAGAT--AAA-----------------------------------------------------------------------------------------------------------------------CA----AGGCGCGTTCC-CAA--------------TTGTATTCGCG------TA----TTGCGTGTGTTGTT-TGTTGTTTTTGTAACCATCTATAAATAGCC--AGCCAGATT-------TCTTGC-----------C-CCATGTG-----------------------------AATAAGTGCCTGTG-------------CAAGT----GTGTGTGT--GT-GCGGAAC
droYak3 2R:6556219-6556492 - GTCCACCA------CCTCCTCACATGCGGTCAAGGACTGTTACAGTCGAGTGCAAGGTAATT-TTT-------------------------------------GGCGA-------------CA-AG-----------CAAGAT-----AGC--------TCCGTACA-----------------------------------CATATCGCGCACAG------AATGCACT---GTCAA-----------------AA--AA---------GGAGCGAGAT--AAG-----------------------------------------------------------------------------------------------------------------------CA----AGGCGCGTTTCCAAC--------------TTGTATTCAAG------TATTGCGTGCGTGTGTTGTT-TGTTGTTTTTGCAACAATTTATAAATAGCC--AGCCTGATT-------TCTTGG-----------CC-CATGTG-----------------------------CATTAGTGTGTATG---------TGTGTGTGTATGCATGTTTGT--GT-GCGAAAC
droEug1 scf7180000409752:1078882-1079171 - ATCCACAA------CCTCTCAGCATGCGGTCAAGGATTGTTACAGTCGAGTGCAAGGTAATT-TACTTTTCCTTTAGTATTTGGG--------------ATGAGGCGA-------------CA-ACCTCCTACTGAC---TGC--TA-----------------------------------TATAGCACATAGCTTTCAGTCGTTTATCAGAT-A------AATGCACT---GGGGA-----------------AA--AA---------G--AAGACA--AAAAC----------------------------------------------------------------------------------------------------------------------CA----GAGCACGTTTCTCAG--------------ATGTATTTGTG------AG----TTGCGTGTGTTGTT-TGTGTTTTTTGCAAGAATTTATAAATAGCC--AGCCTGATT-------TCTTAG-----------CTCCATATG-----------------------------TA---------------------------TGC----TTGTATTT--GTGGCGGAAC
droBia1 scf7180000302408:995072-995320 - GTCCACCA------GTTCCCCCCATGCGGTCAAGGATTGCTACAGCCGAGTGCAAGGTAATT-TG--------------------------------------GGCGA-------------TA-ACCTG-----------CA--------------------------------------------------------GGGTCGCATAGCACCCAA------AATGCACT---GCGCG-----------------GA--AAAC-------G--TAGAGAT-AAAAC----------------------------------------------------------------------------------------------------------------------CA----GGGCACGTTCCGCGC--------------CTGTATTTGTG------AA----TTGCGTGTGTTGTT-CGTTGTTTTTGCAAGCACTTATAAATAGCC--AGCCTGATT-------TCTTGG-----------CCCCATGTG-----------------------------TAGATATG--T-------------------AT----GGCGGTGT--GTGGCGGAAC
droTak1 scf7180000415115:403644-403914 + GTCCACCA------ATTCCCCGCATGCTGTCAAGGATTGCTACAGTCGAGTGCAAGGTAAAA-ATA---------------TGGGGT-------CCCTAAAAAGGCGA-------------TA-AC-----------CTATAG-----A-------------------------------------CCACTGAGCTTTTCGTCATCCTGTGGGTAG------AATGCACT---GGGGA-----------------AA--AA---------A--TAGAGAT-AAAAC----------------------------------------------------------------------------------------------------------------------CA----GAGCACGTTCCTTGG--------------TGGTATTTGTG------AA----TTGCGTGTGTTGTT-TGTTGTTTTTGCAAGAATTTATAAATAGCC--AGCCTGATT-------TCTTGG-----------TCGCATGTG-----------------------------TA---------------------------TGT----GTGAGTGT--GTGACGGAAC
droEle1 scf7180000491028:1868741-1869022 - ATCCACCA------CATCCCCTCATGCGGTCAAAGATTGCTACAGTCGAGTGCAAGGTAATT-TTT---------------TTTGGTCAGACCATCTCCATAAGGCGG-------------TA-ATC--CAAACCAT---AGT--TAAA------------------------------------AGCGTTAAACTTTGAATCGTATACGC-GC-A------AATGCACT---GGGGA-----------------AA--AA---------AACAAGAGAT--AAAG-------------------------------------------------------------------------------------------------------------------AA-AA----AAGCACGTTCCTCAG--------------TTGTATTTGTG------AA----TTGCGTGTGTTGTT-TGTTGTTTTTGCAAGAATTTATAAATAGCC--AGCCTGATT-------TCTTGG-----------TCGCATGTG------------------------------------------------------------------TATGTGT--GC-GGGGAAC
droRho1 scf7180000780252:572-828 + ATCCACCA------CATCCCCTCATGCGGTCAAGGATTGCTACAGTCGAGTGCAAGGTAATT-TTT-------------------------------------GTGGATAGCA------------TCTG---TAAATGGAGA-----TA-------------------------------------GCGGTTAAACTACTGTCGCATACCC-TC-A------AATGCACT---GGGGA-----------------AA--AA---------A-CAAGAGAT--AAAG----------------------------------------------------------------------------------------------------------------------AA----AAGCACGTTCCGTAG--------------TTGTATTTGTG------AA----TTGCGTGTGGTGTT-TGTTGTTTTTGCAAGAGTTTATAAATAGCC--AGCCTGATT-------TCTTGG-----------CCGCATGTG------------------------------------------------------------------TATGTGT--GC-GGCGAAC
droFic1 scf7180000454082:584604-584892 - GACCACGT------CCTCTCCACACGCGGTCAAGGATTGCTACAGTCGAGTGCAAGGTAAACTTTTGT-----TCGGAATCGGGG---AAGCCTCCCCAAAAAGGGAG-------------ATAACTTA---TACAT---AGC--TATA-------------------------------------TCAGTTAGCTTTCAGTCGCAGT--C--------CCCAATGCACT---GAGCA-----------------AA--AAAAAA--AA-CAGAAGAGAT--AAA-----------------------------------------------------------------------------------------------------------------------C------AGCATGTT---------------------GGTGTTGGTG------GA----CTGCGTGTGTTGCT-TGTTGTTTTTGCAAGAGTTTATAAATAGCC--AGCCTGATT-------TCTTGG-----------CCACATGTG------------------------------------------------------TGTGTGT----TTGTGTGT--GT-GGAGAAC
droKik1 scf7180000302382:931486-931823 - GACCACCA------CATCCCCGTATGCGGTCAAGGATTGCTACAGTCGAGTGCAAGGTAATT-GAC-------------------------------------GGGGC-------------CC-CA-----AAAAGT---AGC--GATT-------AGCGATAG-------------TCACTCGGAGCAGGCAGCTTGCAGTCAGGGACTCG-C-AGTCGTAAGTGC--------------------------AGCAAA--------AACAT-----GCTTTCGAGT---------------------------------------AGAAAATACATACATACACTATGTGCAATACATATTCACACGTACGAT--GGCAC----------------------------CCGCC-----CCCCTTTCGGAGCT---CCGCTCACTTTGTG------AA----TTGCGTGCGTTGTT-TGTTGTTTTTGCGAAAATTTATAAATAGCC--AGCCCGATT-------TTTCGT-----------CT----GTG-----------------------------AATACGAG---------------------AGT----GTGTGAGC--GT-GGGGAAC
droAna3 scaffold_12916:8726779-8727133 + dan_609 GTCCACCA------CCTCGCCCTATGCGGTCAAGGACTGCTATAGCCGCGTCCAAGGTAACT-ATCA-------------------------------------CCGG-------------AA-GA------------GA--CTCCATCGGAGCTCCACTCCAGTC----------G--TGTCATAGCCTCCAGCTTTCAGTCAGTCAGTCGCCAT------AATGCACTATTGGGTT-----------------AAAA--------AACAT-----GTTTTGCA-------------------------------------------------------TTCAGTATGTG-------TGTGTG--TGTGTGAGTGTGCCCCCACC---------------------ACCACCT-----CCCCAC-------C---CCACCACAGTTGTG------AA----TTGCGTGTATTAT--TGTTGTTTTTGCAAGAATTTATAAATAGCC--AGCCTGATTTCGCGTA-------TGTT---TTTTTGCA---------------T---A---CATA------TATAAATACATACATATGTATGATG-----TT----ATGGTTGTGTGG-AGCGAAC
droBip1 scf7180000396535:1267714-1268050 + GTCCACCA------CATCGCCTTATGCGGTCAAGGACTGCTACAGCCGTGTCCAAGGTAATT-ATCT------------------------------------CCCGA-------------AA-AA-----------AGA--CTCC-------------TCCAGTCGCATCCACTTGAGTGGCATAGCCGACAGCTTTTAGTCAGTCACTCGCCAT------AATGCATT---GGCTT-----------------TT--AAGAAAAAAACAT-----GTTTGGCA-------------------------------------------------------T----TATGGG---------------TGTGTGAG--TGAAC----------------------------CCCCC-----CT---------GCTCCACCACCCCAGTTGTG------AA----TTGCGTGTATTGT--TGTTGTTTTTGAAAGAATTTATAAATAGCC--AGCCTGATTTCGCGTA---------TT---TTTTTGCA---------------T---G---CATACATACATATAAACATATGTA-----------TATATGG----TTGTGTAT--GG-GGCGAAC
dp5 4_group4:3573780-3574069 + dps_1676 GTCGTCCAGCGCAGCATCCTCATGTGCCGTCAAGGATTCCTACAGTCGCGTCCAAGGTAATT-ATCGT-----TC-------------------------------------------------------------------------------------------------------------------AGAGCTTTTCGTCGCC-------------ACCGCTGCACA---GCAGAGAGAGAGAGCAAAACAACAAA--------AACAT-----GTTTAAAAGC------------------------------------------------------------------------------------------------------ACCAACAAAAATAAGAAAACCAGCC-----CCCCAT--------------TT---------------TA----TTGCGTGTATTGT--GGTTGTTTTTGTGAGAATTTAAAAATAGAC--AGCCTGATT-------TGATGT-----------CC--ATGTATTCGTTGTCCGTGGGAGTTCAC-------TATGAG-------------------TGTGTGT----ATGTATGT--ATGGGGGAAC
droPer2 scaffold_10:2602820-2603109 + dpe_626 GTCGTCCAGCGCAGCATCCTCATGTGCCGTCAAGGATTCCTACAGTCGCGTCCAAGGTAATT-ATCGT-----TC-------------------------------------------------------------------------------------------------------------------AGAGCTTTTCGTCGCC-------------ACCGCTGCACA---GCAGAGAGAGAGAGCAAAACAACAAA--------AACAT-----GTTTAAAAGC------------------------------------------------------------------------------------------------------ACCAACAAAAATAAGAAAACCAGCC-----CCCCAT--------------TT---------------TA----TTGCGTGTATTGT--GGTTGTTTTTGTGAGAATTTAAAAATAGAC--AGCCTGATT-------TGATGT-----------CC--ATGTATTCGTTGTCCGTGGGAGTTCAC-------TATGAG-------------------TGTGTGT----GTGTATGT--ATGGGGGAAC
droWil2 scf2_1100000004516:682954-683231 - dwi_1141 GCCATCAA------CCACGCCTTTTGTCGTCAAGGATTCTTACAGTCGTGTCCAAGGTGAGC-AAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA-AAACCGAAACCACAAA--------AATACAGTAAATTTACACGCAGCCATCACACACTTACACACAACTTAAAATCTGTGTGAACG-------------------------TGCATGTTTGTATGTATGTG--TGCAC----------------------------CAGCC-----CCCAC------ACT---CCGCGTAGTTTGTT----------------TTTTGTTGT--TTTTGTTTTTGCAAGAATTTAAAAATAGCCCCAGGCTGATT-------TGCTGG-----------TTA---GTG----------------------T------TGT---------------------------TG----TTTTTCGC--AT-GAGAAAC
droVir3 scaffold_12723:4619870-4620006 - CTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------TTGCTGTTGT-------TA----ATACCCGCATTGTG----TGTTTTTGCAAGAATTTAAAAATAGCC--GCAAT-ACT-------TATTGAAAATTCTCTTTCT----GTG-----------T---A---TGTA------CATGCATATGTA--------TGGTGTGTGTGTGT--GTGTGTTT--GT-GTGAAAC
droMoj3 scaffold_6500:10589434-10589528 - A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCCCGCATTGTG-TGTTGTTTTTGCAAGAATTTAAAAATAGCC--ACAATGTTC-------TTTCTG-----------T-------G---------CATGGTA---CACA------TGT---------------------------GA----GAGTGTGT--AT-GAATAAC
droGri2 scaffold_15126:3572476-3572816 - GCATTCAAGCAGCGCCAGTCCGTATTCAACTAAGGATTCATACAGCAGAGTGCAAGGTAATT-AAAAAAAAAAAAAATAATGCTGGT------------------GAAAGGCAACTCACAATG-CA-----------AGC--GTGC-------------GTCAGGCAAATGCAGTCATTATTCATGGCAGTTAGCTTTTTGTCATGCATATG-C-A------GATGTGTA---AAG---------------------------------------------------------------------------------TATACGTGAACAAAACGCATACA----------------------------------------CACACAAGCACGCACACACACACACACA-----------CTCAGT--------------TTATGTTCACTTGATTCT---GATTACCCACATTGTG-AGTTGTTTTTGCACTCATTTAAAAATAGCC--GCGATGTTT-------TTTTGA-----------ATATTCGT-------------------------------------------------------------T----ATATATGT--GT-GTGGAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTCCACCA------CCTCCTCGCACGCGGTCAAGGACTGCTACAGTCGAGTGCAAGGTAATT-TT--------------------------------------GGCGA-------------AA-AA-----------CCAGA----------------------------------------------------------------TAGCACTCAG------AATGCACT---GGCAA-----------------AA--AG---------GGGGCGAGATTAAAA-----------------------------------------------------------------------------------------------------------------------CC----GGGCGCGTTTCTCAC--------------TTGTTTTCGTG------TA----TTGCGTGTGTTGTT-TGTTGTTTTTGCAACCATTTATAAATAGCC--AGCCTGATT-------TCTTGG-----------CCCCATGTG-----------------------------CATAAGTGTGTGTG-----------TGTGCGT----GTGTTTGT--GT-GGGGAACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................CGCACGCGGTCAAGGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.00411200000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-TGTTGTTTTTGCAACC...............................................................................................................................................1913.00300300000000000000
.....................GCACGCGGTCAAGGACTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00321000000000000000
............................GTCAAGGACTGCTACAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00303000000000000000
....................CGCACGCGGTCAAGGACTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00201100000000000000
.....................GCACGCGGTCAAGGACTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000000000000000
..............................CAAGGACTGCTACAGTCGAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
...............................AAGGACTGCTACAGTCGAGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
...CACCA------CCTCCTCGCACGCGGTCAAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
....................CGCACGCGGTCAAGGACTGCTACAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
.......A------CCTCCTCGCACGCGGTCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
...........................GGTCAAGGACTGCTACAGTCGAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
..............................CAAGGACTGCTACAGTCGAGTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000100000
......................................................................................................................................................................................................................................................................................ATTAAAA-----------------------------------------------------------------------------------------------------------------------CC----GGGCGCGTT.........................................................................................................................................................................................................................1811.00100001000000000000
..................................GACTGCTACAGTCGAGTGCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGT----GTGTTTGT--GT-GGGG...2011.00100000000001000000
................TCCTCGCACGCGGTCAAGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
......................................GCTACAGTCGAGTGCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTT-TGTTGTTTTTGCAA.................................................................................................................................................2111.00100000001000000000
...................................ACTGCTACAGTCGAGTGCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-----------------------------CATAAGTGTGTGTG-----------TGTGC..........................2111.00100000000001000000
............................GTCAAGGACTGCTACAGTCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
....................CGCACGCGGTCAAGGACTGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
...........................GGTCAAGGACTGCTACAGTCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCGT----GTGTTTGT--GT-GG.....1911.00100001000000000000
....................CGCACGCGGTCAAGGACTGCTACAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
...........................GGTCAAGGACTGCTACAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
...........................GGTCAAGGACTGCTACAGTCGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
..................CTCGCACGCGGTCAAGGACTGCTACAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
..................CTCGCACGCGGTCAAGGACTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-----------------------------CATAAGTGTGTGTG-----------TGC............................19120.08100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-----------TGTGCGT----GTGTTTGT--G.........18180.06100000000001000000
droSec2
GTCCACCA------CCTCCTCGCACGCGGTCAAGGACTGCTACAGTCGAGTGCAAGGTAATT-TTT-------------------------------------GGCGA-------------AA-AA-----------CCAGA----------------------------------------------------------------TAGCACTCAG------AATGCACT---GGCAA-----------------AA--AG---------GGGGCGAGTTTAAAAC-----------------------------------------------------------------------------------------------------------------------C----AGGCGCGTTTCTCAC--------------TTGTTTTCGTG------TA----TTGCGTGTGTTGTT-TTTTGTTTTTGCAACCATTTATAAATACCC--AGCCTGATT-------TCTTGG-----------CCCCATGTG-----------------------------CATAAGTGTGTGTG-------------TGCGT----GTGTTTGT--GT-GGGGAACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................GCACGCGGTCAAGGACTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
...........................GGTCAAGGACTGCTACAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------TGCGT----GTGTTTGT--GT-GGG....1911.0011000
GTCCACCA------CCTCCTCGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000
...............................................GAGTGCAAGGTAATT-TTT-------------------------------------GGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
......................................GCTACAGTCGAGTGCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
....................CGCACGCGGTCAAGGACTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
......CA------CCTCCTCGCACGCGGTCAAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
................TCCTCGCACGCGGTCAAGGACTGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
...........................GGTCAAGGACTGCTACAGTCGAGTGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010001
....................CGCACGCGGTCAAGGACTGCTACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
dm3
GTCCACCA------CTTCCTCACACGCGGTCAAGGACTGCTACAGTCGAGTGCAAGGTAATT-TTT-------------------------------------GGCGA-------------AA-AA-----------ACAGA----------------------------------------------------------------TAGCGCTCAG------AATGCACT---GGCAA-----------------AA--AA---------GGGGCGAGATTGAAAG----------------------------------------------------------------------------------------------------------------------C-----AGACGCGTTTCTCAC--------------TTGTTTTTGTG------TA----TTGCGTGTGTTGTTTTGTTGTTTTTGCAACCATTTATAAATAGCC--AGCCTGATT-------TCTTAG-----------CCCCATGTG-----------------------------CATAAGTGTGTGTG-------------TGCGT----GTGTGTGT--GT-GTAGAACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-----------CCCCATGTG-----------------------------CATAAGTGTGTG............................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000001000000000000000000000000
...........................GGTCAAGGACTGCTACAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GCTACAGTCGAGTGCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000000000000001000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------CCCCATGTG-----------------------------CATAAGTGTGTGT...........................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GCGAGATTGAAAG----------------------------------------------------------------------------------------------------------------------C-----AGACGCG...........................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-----------CCCCATGTG-----------------------------CATAAGTGTGT.............................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000010000000000
.....................................TGCTACAGTCGAGTGCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................AA-AA-----------ACAGA----------------------------------------------------------------TAGCGCTCAG------A.............................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CTGCTACAGTCGAGTGCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TCAAGGACTGCTACAGTCGAGTGCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................CAGA----------------------------------------------------------------TAGCGCTCAG------AATGCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
..........................CGGTCAAGGACTGCTACAGTCGAGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................GATTGAAAG----------------------------------------------------------------------------------------------------------------------C-----AGACGCGTTTCT......................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................GAGATTGAAAG----------------------------------------------------------------------------------------------------------------------C-----AGACGCGTT.........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.......................................................................................................................................................................................................................................................................................TTGAAAG----------------------------------------------------------------------------------------------------------------------C-----AGACGCGTTT........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GTCCACCA------CTTCCTCACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGATT-------TCTTAG-----------CCCCATGTG-----------------------------CATA....................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................AA--AA---------GGGGCGAGATTGAAAG----------------------------------------------------------------------------------------------------------------------C-----..................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----TTGCGTGTGTTGTTTTGTTG..........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................TCACACGCGGTCAAGGACTGCTACAGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CCA------CTTCCTCACACGCGGTCAAGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TACAGTCGAGTGCAAGGTAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTG------TA----TTGCGTGTGTTG..................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......A------CTTCCTCACACGCGGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................AG----------------------------------------------------------------------------------------------------------------------C-----AGACGCGTTTCTCAC--------------TT...................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................T-------------------------------------GGCGA-------------AA-AA-----------ACAGA----------------------------------------------------------------TAGCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................A---------GGGGCGAGATTGAAAG----------------------------------------------------------------------------------------------------------------------C-----AGACGCG...........................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGTTTTGTTGTTTTTGCAAC................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................AA-----------------AA--AA---------GGGGCGAGATTGA.................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GCTACAGTCGAGTGCAAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................CACGCGGTCAAGGACTGCTACAGTCGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CCTCACACGCGGTCAAGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------CCCCATGTG-----------------------------CATAAGTG................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AAGGACTGCTACAGTCGAGTGCAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................ATT-TTT-------------------------------------GGCGA-------------AA-AA-----------ACAGA----------------------------------------------------------------T.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TGCTACAGTCGAGTGCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAAATAGCC--AGCCTGATT-------TCTTAG-----------C.............................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTG------TA----TTGCGTGTGTTG..................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATAGCC--AGCCTGATT-------TCT............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTATAAATAGCC--AGCCTG.........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
................TCCTCACACGCGGTCAAGGACTGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGCC--AGCCTGATT-------TCTTA..........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GGTCAAGGACTGCTACAGTCGAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CGCGGTCAAGGACTGCTACAGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GTCAAGGACTGCTACAGTCGAGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................A----------------------------------------------------------------TAGCGCTCAG------AATGCACT---GG.................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTCACACGCGGTCAAGGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TCAAGGACTGCTACAGTCGAGTGCAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CACACGCGGTCAAGGACTGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CACCA------CTTCCTCACACGCGGTCAAGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GTCCACCA------CTTCCTCACACGCGGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CGCGTTTCTCAC--------------TTGTTTTT.............................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................................................................................................................................AGA----------------------------------------------------------------TAGCGCTCAG------AATGCA........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TCACACGCGGTCAAGGACTGCTACAGTCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................ACAGA----------------------------------------------------------------TAGCGCTCAG------AATGCC........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTG-----------------------------CATAAGTGTGTGTG-------------TGT..........................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................CACACGCGGTCAAGGACTATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GTCCACCA------ACTCCTCACACGCGGTCAAGGACTGCTACAGTCGAGTGCAAGGTAATT-TTT-------------------------------------GGCGA-------------CA-AA-----------CAATAT-----AGC--------TTCGT-------------------------------------ACACAAAGCGCGCAA------AATGCACT---GTCAA-----------------AA--AAG--------GGGGAGAGAT--AAA-----------------------------------------------------------------------------------------------------------------------CA----AGGCGCGTTCC-CAA--------------TTGTATTCGCG------TA----TTGCGTGTGTTGTT-TGTTGTTTTTGTAACCATCTATAAATAGCC--AGCCAGATT-------TCTTGC-----------C-CCATGTG-----------------------------AATAAGTGCCTGTG-------------CAAGT----GTGTGTGT--GT-GCGGAACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................GGTCAAGGACTGCTACAGTCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------------------------AATAAGTGCCTGTG-------------CAAGT----....................2011.0010000010
..............ACTCCTCACACGCGGTCAAGGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
...CACCA------ACTCCTCACACGCGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------------------------AATAAGTGCCTGTG-------------CAAGT----GTG.................2311.0010000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------CAAGT----GTGTGTGT--GT-GCGG...2011.0010000100
......................................GCTACAGTCGAGTGCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTG-------------CAAGT----GTGTGTGT--G.........2020.5010000010
droYak3
GTCCACCA------CCTCCTCACATGCGGTCAAGGACTGTTACAGTCGAGTGCAAGGTAATT-TTT-------------------------------------GGCGA-------------CA-AG-----------CAAGAT-----AGC--------TCCGTACA-----------------------------------CATATCGCGCACAG------AATGCACT---GTCAA-----------------AA--AA---------GGAGCGAGAT--AAG-----------------------------------------------------------------------------------------------------------------------CA----AGGCGCGTTTCCAAC--------------TTGTATTCAAG------TATTGCGTGCGTGTGTTGTT-TGTTGTTTTTGCAACAATTTATAAATAGCC--AGCCTGATT-------TCTTGG-----------CC-CATGTG-----------------------------CATTAGTGTGTATG---------TGTGTGTGTATGCATGTTTGT--GT-GCGAAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGTGTGTATG---------TGTGTGT..........................2012.00200010010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTAGTGTGTATG---------TGTGT............................1912.00200000020000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------------------------CATTAGTGTGTATG---------TGTGTGTGT........................2412.00200000020000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------TATTGCGTGCGTGTGTTGTT-T..............................................................................................................................................................2212.00202000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTATTCAAG------TATTGCGTGCGTGTGTT...................................................................................................................................................................2811.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------TATTGCGTGCGTGTGTTG..................................................................................................................................................................1911.00100000010000
............................................................................................................................................................................................................................................AA-----------------AA--AA---------GGAGCGAGAT--AAG-----------------------------------------------------------------------------------------------------------------------CA----AGGCGC............................................................................................................................................................................................................................2711.00100000010000
.........................................ACAGTCGAGTGCAAGGTAATT-TTT-------------------------------------GGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTATAAATAGCC--AGCCTG.........................................................................................................................2111.00101000000000
..........................................CAGTCGAGTGCAAGGTAATT-TTT-------------------------------------GGCGA-------------C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
...CACCA------CCTCCTCACATGCGGTCAAGGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000000000
..............CCTCCTCACATGCGGTCAAGGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAG------TATTGCGTGCGTGTGTTGTT-TGTT...........................................................................................................................................................2811.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCAAG------TATTGCGTGCGTGTGTT...................................................................................................................................................................2611.00100000010000
...........................GGTCAAGGACTGTTACAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..CCACCA------CCTCCTCACATGCGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.................CCTCACATGCGGTCAAGGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATTCAAG------TATTGCGTGCGTGTGTTGT.................................................................................................................................................................2911.00100000010000
...........................GGTCAAGGACTGTTACAGTCGAGTGCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
droEug1
ATCCACAA------CCTCTCAGCATGCGGTCAAGGATTGTTACAGTCGAGTGCAAGGTAATT-TACTTTTCCTTTAGTATTTGGG--------------ATGAGGCGA-------------CA-ACCTCCTACTGAC---TGC--TA-----------------------------------TATAGCACATAGCTTTCAGTCGTTTATCAGAT-A------AATGCACT---GGGGA-----------------AA--AA---------G--AAGACA--AAAAC----------------------------------------------------------------------------------------------------------------------CA----GAGCACGTTTCTCAG--------------ATGTATTTGTG------AG----TTGCGTGTGTTGTT-TGTGTTTTTTGCAAGAATTTATAAATAGCC--AGCCTGATT-------TCTTAG-----------CTCCATATG-----------------------------TA---------------------------TGC----TTGTATTT--GTGGCGGAACSizeHit CountTotal NormTotal
No Reads
droBia1
GTCCACCA------GTTCCCCCCATGCGGTCAAGGATTGCTACAGCCGAGTGCAAGGTAATT-TG--------------------------------------GGCGA-------------TA-ACCTG-----------CA--------------------------------------------------------GGGTCGCATAGCACCCAA------AATGCACT---GCGCG-----------------GA--AAAC-------G--TAGAGAT-AAAAC----------------------------------------------------------------------------------------------------------------------CA----GGGCACGTTCCGCGC--------------CTGTATTTGTG------AA----TTGCGTGTGTTGTT-CGTTGTTTTTGCAAGCACTTATAAATAGCC--AGCCTGATT-------TCTTGG-----------CCCCATGTG-----------------------------TAGATATG--T-------------------AT----GGCGGTGT--GTGGCGGAACSizeHit CountTotal NormTotal
No Reads
droTak1
GTCCACCA------ATTCCCCGCATGCTGTCAAGGATTGCTACAGTCGAGTGCAAGGTAAAA-ATA---------------TGGGGT-------CCCTAAAAAGGCGA-------------TA-AC-----------CTATAG-----A-------------------------------------CCACTGAGCTTTTCGTCATCCTGTGGGTAG------AATGCACT---GGGGA-----------------AA--AA---------A--TAGAGAT-AAAAC----------------------------------------------------------------------------------------------------------------------CA----GAGCACGTTCCTTGG--------------TGGTATTTGTG------AA----TTGCGTGTGTTGTT-TGTTGTTTTTGCAAGAATTTATAAATAGCC--AGCCTGATT-------TCTTGG-----------TCGCATGTG-----------------------------TA---------------------------TGT----GTGAGTGT--GTGACGGAACSizeHit CountTotal NormTotal
No Reads
droEle1
ATCCACCA------CATCCCCTCATGCGGTCAAAGATTGCTACAGTCGAGTGCAAGGTAATT-TTT---------------TTTGGTCAGACCATCTCCATAAGGCGG-------------TA-ATC--CAAACCAT---AGT--TAAA------------------------------------AGCGTTAAACTTTGAATCGTATACGC-GC-A------AATGCACT---GGGGA-----------------AA--AA---------AACAAGAGAT--AAAG-------------------------------------------------------------------------------------------------------------------AA-AA----AAGCACGTTCCTCAG--------------TTGTATTTGTG------AA----TTGCGTGTGTTGTT-TGTTGTTTTTGCAAGAATTTATAAATAGCC--AGCCTGATT-------TCTTGG-----------TCGCATGTG------------------------------------------------------------------TATGTGT--GC-GGGGAACSizeHit CountTotal NormTotal
No Reads
droRho1
ATCCACCA------CATCCCCTCATGCGGTCAAGGATTGCTACAGTCGAGTGCAAGGTAATT-TTT-------------------------------------GTGGATAGCA------------TCTG---TAAATGGAGA-----TA-------------------------------------GCGGTTAAACTACTGTCGCATACCC-TC-A------AATGCACT---GGGGA-----------------AA--AA---------A-CAAGAGAT--AAAG----------------------------------------------------------------------------------------------------------------------AA----AAGCACGTTCCGTAG--------------TTGTATTTGTG------AA----TTGCGTGTGGTGTT-TGTTGTTTTTGCAAGAGTTTATAAATAGCC--AGCCTGATT-------TCTTGG-----------CCGCATGTG------------------------------------------------------------------TATGTGT--GC-GGCGAACSizeHit CountTotal NormTotal
No Reads
droFic1
GACCACGT------CCTCTCCACACGCGGTCAAGGATTGCTACAGTCGAGTGCAAGGTAAACTTTTGT-----TCGGAATCGGGG---AAGCCTCCCCAAAAAGGGAG-------------ATAACTTA---TACAT---AGC--TATA-------------------------------------TCAGTTAGCTTTCAGTCGCAGT--C--------CCCAATGCACT---GAGCA-----------------AA--AAAAAA--AA-CAGAAGAGAT--AAA-----------------------------------------------------------------------------------------------------------------------C------AGCATGTT---------------------GGTGTTGGTG------GA----CTGCGTGTGTTGCT-TGTTGTTTTTGCAAGAGTTTATAAATAGCC--AGCCTGATT-------TCTTGG-----------CCACATGTG------------------------------------------------------TGTGTGT----TTGTGTGT--GT-GGAGAACSizeHit CountTotal NormTotal
No Reads
droKik1
GACCACCA------CATCCCCGTATGCGGTCAAGGATTGCTACAGTCGAGTGCAAGGTAATT-GAC-------------------------------------GGGGC-------------CC-CA-----AAAAGT---AGC--GATT-------AGCGATAG-------------TCACTCGGAGCAGGCAGCTTGCAGTCAGGGACTCG-C-AGTCGTAAGTGC--------------------------AGCAAA--------AACAT-----GCTTTCGAGT---------------------------------------AGAAAATACATACATACACTATGTGCAATACATATTCACACGTACGAT--GGCAC----------------------------CCGCC-----CCCCTTTCGGAGCT---CCGCTCACTTTGTG------AA----TTGCGTGCGTTGTT-TGTTGTTTTTGCGAAAATTTATAAATAGCC--AGCCCGATT-------TTTCGT-----------CT----GTG-----------------------------AATACGAG---------------------AGT----GTGTGAGC--GT-GGGGAACSizeHit CountTotal NormTotal
No Reads
droAna3
GTCCACCA------CCTCGCCCTATGCGGTCAAGGACTGCTATAGCCGCGTCCAAGGTAACT-ATCA-------------------------------------CCGG-------------AA-GA------------GA--CTCCATCGGAGCTCCACTCCAGTC----------G--TGTCATAGCCTCCAGCTTTCAGTCAGTCAGTCGCCAT------AATGCACTATTGGGTT-----------------AAAA--------AACAT-----GTTTTGCA-------------------------------------------------------TTCAGTATGTG-------TGTGTG--TGTGTGAGTGTGCCCCCACC---------------------ACCACCT-----CCCCAC-------C---CCACCACAGTTGTG------AA----TTGCGTGTATTAT--TGTTGTTTTTGCAAGAATTTATAAATAGCC--AGCCTGATTTCGCGTA-------TGTT---TTTTTGCA---------------T---A---CATA------TATAAATACATACATATGTATGATG-----TT----ATGGTTGTGTGG-AGCGAACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................................................GTT-----------------AAAA--------AACAT-----GTTTTGCA-------------------------------------------------------TTCAGT..................................................................................................................................................................................................................................................................................................2611.001000010
...........................GGTCAAGGACTGCTATAGCCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..................GCCCTATGCGGTCAAGGACTGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
..............................CAAGGACTGCTATAGCCGCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCACAGTTGTG------AA----TTGCGT........................................................................................................................................................................2011.001000010
................................................................................................................................................CCATCGGAGCTCCACTCCAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...........................GGTCAAGGACTGCTATAGCCGCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
GTCCACCA------CCTCGCCCTATGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................................................................................................................................................................................................................................................................................................................................................TG-------TGTGTG--TGTGTGAGTGT...................................................................................................................................................................................................................................................................19200.102000002
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAATACATACATATGT.....................................18110.091010000
........................................................................................................................................................................................................................................................................................................................................................GTATGTG-------TGTGTG--TGTGTGAG......................................................................................................................................................................................................................................................................21160.061100000
...........................................................................................................................................................................................................................................................................................................................................................TGTG-------TGTGTG--TGTGTGAGT.....................................................................................................................................................................................................................................................................19200.051000001
............................................................................................................................................................................................................................................................................................................................................................GTG-------TGTGTG--TGTGTGAGTGTG..................................................................................................................................................................................................................................................................21200.051000001
.............................................................................................................................................................................................................................................................................................................................................................TG-------TGTGTG--TGTGTGAGTGTG..................................................................................................................................................................................................................................................................20200.051100000
droBip1
GTCCACCA------CATCGCCTTATGCGGTCAAGGACTGCTACAGCCGTGTCCAAGGTAATT-ATCT------------------------------------CCCGA-------------AA-AA-----------AGA--CTCC-------------TCCAGTCGCATCCACTTGAGTGGCATAGCCGACAGCTTTTAGTCAGTCACTCGCCAT------AATGCATT---GGCTT-----------------TT--AAGAAAAAAACAT-----GTTTGGCA-------------------------------------------------------T----TATGGG---------------TGTGTGAG--TGAAC----------------------------CCCCC-----CT---------GCTCCACCACCCCAGTTGTG------AA----TTGCGTGTATTGT--TGTTGTTTTTGAAAGAATTTATAAATAGCC--AGCCTGATTTCGCGTA---------TT---TTTTTGCA---------------T---G---CATACATACATATAAACATATGTA-----------TATATGG----TTGTGTAT--GG-GGCGAACSizeHit CountTotal NormTotal
No Reads
dp5
GTCGTCCAGCGCAGCATCCTCATGTGCCGTCAAGGATTCCTACAGTCGCGTCCAAGGTAATT-ATCGT-----TC-------------------------------------------------------------------------------------------------------------------AGAGCTTTTCGTCGCC-------------ACCGCTGCACA---GCAGAGAGAGAGAGCAAAACAACAAA--------AACAT-----GTTTAAAAGC------------------------------------------------------------------------------------------------------ACCAACAAAAATAAGAAAACCAGCC-----CCCCAT--------------TT---------------TA----TTGCGTGTATTGT--GGTTGTTTTTGTGAGAATTTAAAAATAGAC--AGCCTGATT-------TGATGT-----------CC--ATGTATTCGTTGTCCGTGGGAGTTCAC-------TATGAG-------------------TGTGTGT----ATGTATGT--ATGGGGGAACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............ATCCTCATGTGCCGTCAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020200000000
............................GTCAAGGATTCCTACAGTCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...GTCCAGCGCAGCATCCTCATGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.........................GCCGTCAAGGATTCCTACAGTCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
....................CATGTGCCGTCAAGGATTCCTAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
....................CATGTGCCGTCAAGGATTCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
..............CATCCTCATGTGCCGTCAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............AGCATCCTCATGTGCCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
...............ATCCTCATGTGCCGTCAAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................GATTCCTACAGTCGCGTCCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................CTCATGTGCCGTCAAGGATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.......AGCGCAGCATCCTCATGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................GATTCCTACAGTCGCGTCCAAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000001000
...GTCCAGCGCAGCATCCTCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............AGCATCCTCATGTGCCGTCAAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.........................GCCGTCAAGGATTCCTACAGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.......................GTGCCGTCAAGGATTCCTACAGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
GTCGTCCAGCGCAGCATCCTCATGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
............................GTCAAGGATTCCTACAGTCGCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGT--GGTTGTTTTTGTGT.................................................................................................................................................2020.5010000001000
droPer2
GTCGTCCAGCGCAGCATCCTCATGTGCCGTCAAGGATTCCTACAGTCGCGTCCAAGGTAATT-ATCGT-----TC-------------------------------------------------------------------------------------------------------------------AGAGCTTTTCGTCGCC-------------ACCGCTGCACA---GCAGAGAGAGAGAGCAAAACAACAAA--------AACAT-----GTTTAAAAGC------------------------------------------------------------------------------------------------------ACCAACAAAAATAAGAAAACCAGCC-----CCCCAT--------------TT---------------TA----TTGCGTGTATTGT--GGTTGTTTTTGTGAGAATTTAAAAATAGAC--AGCCTGATT-------TGATGT-----------CC--ATGTATTCGTTGTCCGTGGGAGTTCAC-------TATGAG-------------------TGTGTGT----GTGTATGT--ATGGGGGAACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................ATTCCTACAGTCGCGTCCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003300000
....................CATGTGCCGTCAAGGATTCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAC-------TATGAG-------------------TGTGTGT----GTGTATGT--..........2511.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAC-------TATGAG-------------------TGTGTGT----GT..................2111.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATT-------TGATGT-----------CC--ATGTATT...................................................................................2111.001001000
............................GTCAAGGATTCCTACAGTCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAG-------------------TGTGTGT----GTGTATGT--..........18180.061000100
droWil2
GCCATCAA------CCACGCCTTTTGTCGTCAAGGATTCTTACAGTCGTGTCCAAGGTGAGC-AAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA-AAACCGAAACCACAAA--------AATACAGTAAATTTACACGCAGCCATCACACACTTACACACAACTTAAAATCTGTGTGAACG-------------------------TGCATGTTTGTATGTATGTG--TGCAC----------------------------CAGCC-----CCCAC------ACT---CCGCGTAGTTTGTT----------------TTTTGTTGT--TTTTGTTTTTGCAAGAATTTAAAAATAGCCCCAGGCTGATT-------TGCTGG-----------TTA---GTG----------------------T------TGT---------------------------TG----TTTTTCGC--AT-GAGAAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..CATCAA------CCACGCCTTTTGTCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.00400400
..CATCAA------CCACGCCTTTTGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00303000
...........................CGTCAAGGATTCTTACAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00202000
............................GTCAAGGATTCTTACAGTCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00210100
...ATCAA------CCACGCCTTTTGTCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200
.....CAA------CCACGCCTTTTGTCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200
......................................CTTACAGTCGTGTCCAAGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.50301200
..CATCAA------CCACGCCTTTTGTCGTCAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
..CATCAA------CCACGCCTTTTGTCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
.............................TCAAGGATTCTTACAGTCGTGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
............................GTCAAGGATTCTTACAGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
...................................ATTCTTACAGTCGTGTCCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
......AA------CCACGCCTTTTGTCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
..............................CAAGGATTCTTACAGTCGTGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...................................ATTCTTACAGTCGTGTCCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.......................TTGTCGTCAAGGATTCTTACAGTCGTGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000
...........................................................................................................................................................................................................................................................................................................................AATCTGTGTGAACG-------------------------TGCA......................................................................................................................................................................................................................................................................................1811.00100010
..................................GATTCTTACAGTCGTGTCCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001
...................................ATTCTTACAGTCGTGTCCAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
...ATCAA------CCACGCCTTTTGTCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.........................GTCGTCAAGGATTCTTACAGTCGTGTCCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
....................CTTTTGTCGTCAAGGATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
droVir3
CTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------TTGCTGTTGT-------TA----ATACCCGCATTGTG----TGTTTTTGCAAGAATTTAAAAATAGCC--GCAAT-ACT-------TATTGAAAATTCTCTTTCT----GTG-----------T---A---TGTA------CATGCATATGTA--------TGGTGTGTGTGTGT--GTGTGTTT--GT-GTGAAACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATTTAAAAATAGCC--...............................................................................................................................1811.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCAAGAATTTAAAAAT.....................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGT--GTGTGTTT--GT-GTGAAA.2130.331000000000000000000000000000001000000000000000000000000000000000
droMoj3
A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCCCGCATTGTG-TGTTGTTTTTGCAAGAATTTAAAAATAGCC--ACAATGTTC-------TTTCTG-----------T-------G---------CATGGTA---CACA------TGT---------------------------GA----GAGTGTGT--AT-GAATAACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GCATTCAAGCAGCGCCAGTCCGTATTCAACTAAGGATTCATACAGCAGAGTGCAAGGTAATT-AAAAAAAAAAAAAATAATGCTGGT------------------GAAAGGCAACTCACAATG-CA-----------AGC--GTGC-------------GTCAGGCAAATGCAGTCATTATTCATGGCAGTTAGCTTTTTGTCATGCATATG-C-A------GATGTGTA---AAG---------------------------------------------------------------------------------TATACGTGAACAAAACGCATACA----------------------------------------CACACAAGCACGCACACACACACACACA-----------CTCAGT--------------TTATGTTCACTTGATTCT---GATTACCCACATTGTG-AGTTGTTTTTGCACTCATTTAAAAATAGCC--GCGATGTTT-------TTTTGA-----------ATATTCGT-------------------------------------------------------------T----ATATATGT--GT-GTGGAACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....CAAGCAGCGCCAGTCCGTATTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00202
..............CCAGTCCGTATTCAACTAAGGATTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCACATTGTG-AGTTGTTTTTG....................................................................................................................................................2211.00110
............................ACTAAGGATTCATACAGCAGAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101

Generated: 05/19/2015 at 01:58 AM