ID:

dsi_23817

 Coordinate:

3r:2804609-2804856 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.2 -34.0 -34.0

Flybase annnotation

exon [3r_2804857_2805075_+]; CDS [3r_2804857_2805075_+]; exon [3r_2804139_2804608_+]; CDS [3r_2804139_2804608_+]; intron [3r_2804609_2804856_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCAAAGTTCTCATCCTGGGAGCTGGACCCATCGGCCTGGTCACTCTAATGGTAAGTTAGCTTTACTAAATCATTTACAATTCCATGAAGGGTTACAAAAATCTAAGGTCAGAAAAGGATGTTAGATCCTGACAAAAACTCTTAAGGAATAAACATATTTTTAAAATCTCTCTCCATAAAAACAAATAAGAACTTTGTCAACATTTAAAACTTACACATGCGCTCCTAATACTATGAGCTGAGAGCGATGAATATTTTTAAAAAGATAATCCATATATCTTATATCTTTTATCCTACAGGCTGCTCAAGCCATGGGTGCGTCTGAGATCCTGATTACGGATCTAGTGCA
**************************************************(((((((((.....)))....)))))).(((((...(((((((......((((((.(((.......))).)))))).........)))))))..))))).......(((((((((((.(((((.......(((((.......))))).......................((((.((....)).)))).))))).))).......))))))))(((((...(((((...)))))...)))))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M053
female body
 M025
embryo
 O001
Testis
 SRR902009
testis
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
................................................................................................................................................................................................................................................................................................................................CTGAGATCCTGATTACGGAT........ 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................TCTGAGATCCTGATTACGGAT........ 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
........................GACCCATCGGCCTGGTCACTCTAATGGC........................................................................................................................................................................................................................................................................................................ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................GTTAGATCCTGACAAAAACTC................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................GTCTGGTCACTCTAATGGC........................................................................................................................................................................................................................................................................................................ 19 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................ATCGGCCTGGTCACTCTAAT........................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................GCCATGGGTGCGTCTGAGAT..................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.......TCTCATCCTGGGAGCTGGACCC............................................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................GCTGGACCCATCGGCCTGGT.................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................................................................................................................................CTGATTACGGATCTAGTG.. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................CTGAGATCCTGATTACGG.......... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................CAAAAACTCTTAAGGAATAA..................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.......................................................................................................ATGGTCAGAAAGGGATGTT.................................................................................................................................................................................................................................. 19 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GCTCCTAATACTGTCAG............................................................................................................... 17 2 5 0.20 1 0 0 0 0 0 0 0 1 0 0
.............................ATCGGCCTGGACACTCA.............................................................................................................................................................................................................................................................................................................. 17 2 17 0.12 2 0 0 0 0 0 0 0 0 0 2
...........................................................................ACAATTCCCCGAGGGGTTA.............................................................................................................................................................................................................................................................. 19 3 9 0.11 1 0 0 0 0 0 0 0 1 0 0
........................................................................................................................................................................................................................................................................................................................................CTGATTACGGCTCTGGTG.. 18 2 9 0.11 1 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................TAAAACTCTTAAGGAAAAAAAA.................................................................................................................................................................................................. 22 3 10 0.10 1 0 0 0 0 0 0 0 1 0 0
..........................................CACTACTGGTCAGTTAGCT............................................................................................................................................................................................................................................................................................... 19 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0
...................................CTGGGCACTCTAATCGTAC...................................................................................................................................................................................................................................................................................................... 19 3 14 0.07 1 0 0 0 0 0 0 0 0 1 0
...............................CGGCCTGATCACTCTG............................................................................................................................................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0
...................................................................................................................................................................................................................................................................................................................GCCATGTGCGCGTCTCAGA...................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

GGTTTCAAGAGTAGGACCCTCGACCTGGGTAGCCGGACCAGTGAGATTACCATTCAATCGAAATGATTTAGTAAATGTTAAGGTACTTCCCAATGTTTTTAGATTCCAGTCTTTTCCTACAATCTAGGACTGTTTTTGAGAATTCCTTATTTGTATAAAAATTTTAGAGAGAGGTATTTTTGTTTATTCTTGAAACAGTTGTAAATTTTGAATGTGTACGCGAGGATTATGATACTCGACTCTCGCTACTTATAAAAATTTTTCTATTAGGTATATAGAATATAGAAAATAGGATGTCCGACGAGTTCGGTACCCACGCAGACTCTAGGACTAATGCCTAGATCACGT
**************************************************(((((((((.....)))....)))))).(((((...(((((((......((((((.(((.......))).)))))).........)))))))..))))).......(((((((((((.(((((.......(((((.......))))).......................((((.((....)).)))).))))).))).......))))))))(((((...(((((...)))))...)))))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 O001
Testis
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
........................................................................................................................................................................................................................................................................................................................CCCACGCAGACTCTAGGACTA............... 21 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0
............................................................................................................................................AATTCCTTATTTGTATAA.............................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................AAAAAATTTTAGAGAAAGGTGTTT......................................................................................................................................................................... 24 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................CCCACCCAGACTCTAGGACTA............... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................TCTAGGACTGTTTTTGAGAAT............................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................TCGAATAGATTTAGTAAATGTT............................................................................................................................................................................................................................................................................. 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................AAAAAGTTAAGAGAGAGGTA............................................................................................................................................................................ 20 2 3 0.33 1 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................................................CAGGATTATAATACTGGACT........................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 1 0 0
.................................................................................................ATTAGATTCCAGTCT............................................................................................................................................................................................................................................ 15 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0
................................................................................AGGTACTCCCCAATG............................................................................................................................................................................................................................................................. 15 1 6 0.17 1 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................AAAATTTTAGATAGAG............................................................................................................................................................................... 16 1 9 0.11 1 0 0 0 0 0 0 0 0 1 0
................................................................................AGGTACTTCACAATG............................................................................................................................................................................................................................................................. 15 1 10 0.10 1 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................AGATTTTGAGTGTGTACG................................................................................................................................ 18 2 11 0.09 1 0 0 0 0 0 0 1 0 0 0
.......AGAGTAGGACCCTGG...................................................................................................................................................................................................................................................................................................................................... 15 1 12 0.08 1 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................................................................................GGGTTATGATACTCGATTA.......................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0
..............GGCCCTAGAGCTGGGTAG............................................................................................................................................................................................................................................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................................................................................................................AAATTTTTCTGTTAGGTT........................................................................... 18 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................AGAACTGATGCCTAGA...... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0
................................................................................AGGTGCTTCCCAATGA............................................................................................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:2804559-2804906 + dsi_23817 CCAAAGTTCTCATCCTGGGAGCTGGACCCATCGGCCTGGTCACTCTAATGGTAAGTTAGCTTTACTA---AAT-------------------------------------------------------------------------------------------------------------------CATTTACA----------------------------------------------------------------------------------------------------------------ATTC---------------------CATGAAGGGTTA----CAAAAATCTAAGGTCAGA--AAAGGATGTTAGATCCTGACAAAAACTCTT---------------AAGG-----------------------AAT-------------------AAACATATTTTTAAAATCTCTCTCC--ATAAAAACAAATAAGAACTTTGTC---------------------------------------------------------AACATTTAAAACTT----ACACA------------TGCGCTCCTAATA------CTATGAGCTGAGAGC-----------------GATGAATATTTTTAAAAAG-------------------------------------------------------------------------------------------------------------------------ATAATC---------CATATATCTTATATCTTTTATCCTACAGGCTGCTCAAGCCATGGGTGCGTCTGAGATCCTGATTACGGATCTAGTGCA
droSec2 scaffold_6:2969654-2970036 + CCAAAGTTCTCATCCTGGGAGCAGGACCCATCGGCCTGGTCACTCTAATGGTAAGTTAGCTTTACTT---AAT-------------------------------------------------------------------------------------------------------------------CATTTGCA----------------------------------------------------------------------------------------------------------------ATTC---------------------GATGAAGAGTTATGGTCAAAAGTCTATGGTCAAA--AAAGGATG--AGGTCCAGACAAAAAATCTT---------------AAGATCCTGAT--TGGTAATAA-----------GAAATAAGGAACTCAGAAACATATTTTTAAAATCTCTCTCC--ATAAAACCAAATAAGAACTTTGTC---------------------------------------------------------AACATTTAAAACTTTAAAACTAA------------TGCGCTCCTTATA------CTATCAGCTAAGAGC-----------------GAAGAATATTTCTAAAAAG-------------------------------------------------------------------------------------------------------------------------ATAATC---------CATGTATCTTATATCTTTTATCCTAAAGGCTGCTCAAGCCATGGGTGCGTCTGAGATCCTGATTACGGATCTAGTGCA
dm3 chr3R:2879270-2879634 + CAAAAGTTCTCATCCTGGGAGCAGGACCCATTGGCCTGGTCACTTTAATGGTATGTTAGCTTTACTT---AAT-------------------------------------------------------------------------------------------------------------------CGTTTACA----------------------------------------------------------------------------------------------------------------ATTT---------------------CATAAATGGCTA----CAAAAATCTAAGGTCAAA--AAAGGATGTTAGGTT------------------------------AGGAT----GTTATGTTAATAAGGTTAACAAACGAAATAAGGAACGCAGAAACATATTTTTAAAATCT--CTCC--ATATAAACAT---AGTTCTTATTC---------------------------------------------------------AATATTTAAAACTT----ACAAA------------TGCGCTCCTAATA------CTATCAGCTGAGAGC-----------------GAAGAATATTTCTAAA-GG-------------------------------------------------------------------------------------------------------------------------ATAATC---------CATATATCTTATATCTTTTATCCCACAGGCTGCTCAAGCCATGGGTGCGTCTGAGATCCTCATTACGGATCTTGTGCA
droEre2 scaffold_4770:3132863-3133285 + CCAAGGTTCTCATCCTGGGAGCAGGACCCATCGGCCTGGTCACTCTGATGGTATGTTCACCTTATTCGAAAAT-------------------------------------------------------------------------------------------------------------------CATTTACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTAGATCCATACAAAAACAA--AAACGCTTTTTAATC----CGGTAGCGTTATTTACTAGGTTAACAA-------------------AGTATATTTTTGAAGTTTCTCTCC--A---ACAC-----AAAATTCTGCC---------------------------------------------------------AAGACTTAATACCTCCAA----GTA------------------------------------CAGGGAAC-----------------GAAGACTATTTTTAAAAAGATATTTTTTGTTTATAGGGTGCCTTATTAACTTTAGGTGAAAGCCAAGTATTTATCATTTTATAATGCAGGTTATTTGGGAAACTTTTTAAAATCGTATTTTTAAATAAGACAAATTGT-----------------------TTTTATTCCTTTTA-ACTACAGGCTGCTCAAGCCATGGGTGCGTCGGAGATCCTGATTACGGATCTAGTGCA
droYak3 3R:7493246-7493541 - CCAAAGTTCTCATCCTGGGAGCTGGACCCATCGGCCTGGTCACTCTGATGGTATGTTAGTTATAAAA-----GAAATAATTTT-------------------------------------------------------------------------------------------------------AT------------------------------------------------------------------------------------------------------------------------TATC---------------------CATAAAGGGTAA----CT--------------AA--AAAGGATGCTAGGTCCATACAAAAACGCTT---------------TGGATAGTGGCTTTAATTAAAAGGTTAACAA-------------------AGTATATTTTTCAAAGTTCTCTCCCCCAAAAAAGAACCCAAAATGTTGTC---------------------------------------------------------AAGATTAGTTATCTCAAA----ATATAGGGTAAATTCCGCTCGTAATATACCTATTATTTATTGAGAAT-----------------AAAGACTCATTTTAAAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
droEug1 scf7180000409796:39603-39966 + CCAAGGTTCTCATCCTGGGAGCAGGACCTATCGGCCTGGTCACTCTGATGGTAAGTTTATGTTAGCA---TGT-------------------------------------------------------------------------------------------------------------------GTAGTGTT----------------------------------------------------------------------------------------------------------------TAACCCTTCGACTTGCAGAAAGTTTCTTGATTAGCT-----CTAAAATCTTAAGTCAACTTAAAGG----------------------------------------------------------------TT---------------------------------------------------TATAAACAT---AGGTCTTGTTT---------------------------------------------------------TGTACTTCAT------------------------------------TA------CTTTCT---T-----AAATCTATAAATATATA------------------------------TAATATATATCTTGATAAACTCAAGGTTAAACTGGCTGATAAAGCTTTTTATAATACAGCTTATATTAG---CTTTCTAC---------------------------AGCAGATACCATAAAC------GACTCATGATTTTACTCTTCACAGGCTGCTCAAGCAATGGGCGCCTCTGAAATCCTGATCACAGACCTGCTGCA
droBia1 scf7180000302155:1766989-1767266 - CCAAGGTGCTCATCCTGGGAGCAGGACCCATCGGCCTGGTCACTCTAATGGTATGTTGACCTCGTTA---AAGAAAATATTTTAACTTTCTGGTGTTCATCGCGTAACATTTGAGTCTAACAATGGTATCTAACTGAGGGAGAATTTTAAAAAAATAAAATAGAAAATAAACCATGAGACATAGGTAT------------------------------------------------------------------------------------------------------------------------CATC---------------------CTTAAAGGCCAT----CT--------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTCTTATGCTAACAAAAAATAAGTTTC-----------------------ATGTAATCCT---------------------------AATATCTCTGAGATCCTGATCACGGATCTGCTGCA
droTak1 scf7180000415671:110539-110639 - AATATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAAAATTCGAAATTAAGA--------------------------------TCATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTTTTCCACCTTGCAGGCTGCTCAAGCCATGGGTGCCTCTGAGATTCTGATCACGGATCTGCTGCA
droEle1 scf7180000491278:1697848-1697951 + CCAAAGTGCTCATCCTGGGAGCAGGACCCATCGGACTGGTTACCCTGATGGTAAGTTAAATTAAATA---GGT-------------------------------------------------------------------------------------------------------------------AAATTAAA----------------------------------------------------------------------------------------------------------------TTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGACTCACAGGAAGTTAA------------------------------------------
droRho1 scf7180000771773:21281-21392 + TATAAGC-----------------------------AGAATACCATAAAAGTATTTTGAAGTGAATA---AAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGTCTTATACTTTGCAGGCTGCTCAAGCCATGGGTGCCTCCGAGATCCTGATCACGGATTTGCTACA
droFic1 scf7180000453835:338376-338484 + GGAAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAGTTATTTTTAACAAA-------------------------------------------------------------------------------------------------------------------------TAATAA---------CTTATACTTTCTACTTTTCTCTTAACAGGCTGCTCAGGCCATGGGTGCATCAGAGATCCTGATCACGGACTTGCTGCA
droKik1 scf7180000302639:2052378-2052590 - CCAAGGTGCTCATCCTGGGAGCGGGACCCATTGGCTTGGTCACTCTGCTGGTGAGTTATCATTGGAA-----T-------------------------------------------------------------------------------------------------------------------TGCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATAATATTAAATTGAGATTCATAAAGAAATTATAGGTATTAATATTACTTCATAAACATTTTAAACTA----ACTAA------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGACTTTGCAGGCTGCTCAATCCATGGGTGCCTCTGAGATCCTGATTACTGATCTGCTACA
droAna3 scaffold_13340:21311872-21311947 + ATATATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTTACCTTTCTAACAGGCGGCTCAAGCCATGGGTGCTTCTGAGATTCTCATCACTGACTTGGTGCA
droBip1 scf7180000396708:3621813-3621873 + TTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTTGGCTGCCCAATCCATGGGTGCCTCAGAGATCTTGATCACGGATCTTCTTCA
dp5 2:19438470-19438564 - TTCAGAAGGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTATAGGA-------AACTTATCTTGCCCGCTTTTTAGGTTGCTCAATCCATGGGCGCCTCAGAGATTCTCATCACGGACTTGGAACA
droPer2 scaffold_6:3924251-3924354 + GAAACCC----------------------ATTAGTTTTATTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG------------TGGACTTGTATTTAATATTTTCCCTCACCTAGGTCGCTCAAGCCTTGGGAGCTTCTGAGATTTTGATCACAGATTTGGTGCA
droWil2 scf2_1100000004902:12313330-12313617 + CAAAGGTTGCCATTCTGGGAGCCGGACCTATTGGATTGGTGACGTTGTTGGTGAGTGAAAAT------------------------------------------------------------------------------------------------------------------------------AGATTACAATTATTAAAGGCAAACGAGACCCAATTTTTGACAAAGTGATAAGAAACTCTAATCACAAGGGGCCCCTACTGAATGAACCGAATCTATGAGTTTCTCAATTATTTTATGTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAAAACCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGTTGATCTTAAAGATATTTAC------------T----------TTACTCTTATTTGTCTTTCAGACTGCCCAATCGATGGGAGCTTCCGAGATATTGATTACAGATCTGGTACA
droVir3 scaffold_13047:7770531-7770603 - ATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATTTTAAGTGTTTAAGGTCGCACAATCTATGGGTGCTACAAAGATTTTAATTACGGACTTGGTGCA
droMoj3 scaffold_6540:15506436-15506514 - TCAATTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAATTTGTT-TTATTTATAGGTAGCACAATCTTTGGGAGCCACGGAGATTCTGATTACGGATTTAGTACA
droGri2 scaffold_14830:3581737-3581821 - CGTATAT---------------------------------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAG------------TAA-------ACTTTTATTCA-ATGCTTTAAGGTTGCGCAATCAATGGGTGCCACTGAGATTTTAATTACGGATTTAGTGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCAAAGTTCTCATCCTGGGAGCTGGACCCATCGGCCTGGTCACTCTAATGGTAAGTTAGCTTTACTA---AAT-------------------------------------------------------------------------------------------------------------------CATTTACA----------------------------------------------------------------------------------------------------------------ATTC---------------------CATGAAGGGTTA----CAAAAATCTAAGGTCAGA--AAAGGATGTTAGATCCTGACAAAAACTCTT---------------AAGG-----------------------AAT-------------------AAACATATTTTTAAAATCTCTCTCC--ATAAAAACAAATAAGAACTTTGTC---------------------------------------------------------AACATTTAAAACTT----ACACA------------TGCGCTCCTAATA------CTATGAGCTGAGAGC-----------------GATGAATATTTTTAAAAAG-------------------------------------------------------------------------------------------------------------------------ATAATC---------CATATATCTTATATCTTTTATCCTACAGGCTGCTCAAGCCATGGGTGCGTCTGAGATCCTGATTACGGATCTAGTGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGATCCTGATTACGGAT........2012.00202000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGATCCTGATTACGGAT........2112.00202000000000000000
........................GACCCATCGGCCTGGTCACTCTAATGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GTTAGATCCTGACAAAAACTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.............................ATCGGCCTGGTCACTCTAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGGTGCGTCTGAGAT.....................2011.00100000000000001000
.......TCTCATCCTGGGAGCTGGACCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
....................GCTGGACCCATCGGCCTGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATTACGGATCTAGTG..1811.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGATCCTGATTACGG..........1811.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................CAAAAACTCTT---------------AAGG-----------------------AAT-------------------AA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001000000000000
droSec2
CCAAAGTTCTCATCCTGGGAGCAGGACCCATCGGCCTGGTCACTCTAATGGTAAGTTAGCTTTACTT---AAT-------------------------------------------------------------------------------------------------------------------CATTTGCA----------------------------------------------------------------------------------------------------------------ATTC---------------------GATGAAGAGTTATGGTCAAAAGTCTATGGTCAAA--AAAGGATG--AGGTCCAGACAAAAAATCTT---------------AAGATCCTGAT--TGGTAATAA-----------GAAATAAGGAACTCAGAAACATATTTTTAAAATCTCTCTCC--ATAAAACCAAATAAGAACTTTGTC---------------------------------------------------------AACATTTAAAACTTTAAAACTAA------------TGCGCTCCTTATA------CTATCAGCTAAGAGC-----------------GAAGAATATTTCTAAAAAG-------------------------------------------------------------------------------------------------------------------------ATAATC---------CATGTATCTTATATCTTTTATCCTAAAGGCTGCTCAAGCCATGGGTGCGTCTGAGATCCTGATTACGGATCTAGTGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAGAACTTTGTC---------------------------------------------------------AACATT.........................................................................................................................................................................................................................................................................................................................2112.0021100
........CTCATCCTGGGAGCAGGACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.............CCTGGGAGCAGGACCCATCGGCCTGGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCAAGCCATGGGTGCGTCTGAG.......................2511.0010010
CCAAAGTTCTCATCCTGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..AAAGTTCTCATCCTGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTGCGTCTGAGATCC...................1911.0010001
dm3
CAAAAGTTCTCATCCTGGGAGCAGGACCCATTGGCCTGGTCACTTTAATGGTATGTTAGCTTTACTT---AAT-------------------------------------------------------------------------------------------------------------------CGTTTACA----------------------------------------------------------------------------------------------------------------ATTT---------------------CATAAATGGCTA----CAAAAATCTAAGGTCAAA--AAAGGATGTTAGGTT------------------------------AGGAT----GTTATGTTAATAAGGTTAACAAACGAAATAAGGAACGCAGAAACATATTTTTAAAATCT--CTCC--ATATAAACAT---AGTTCTTATTC---------------------------------------------------------AATATTTAAAACTT----ACAAA------------TGCGCTCCTAATA------CTATCAGCTGAGAGC-----------------GAAGAATATTTCTAAA-GG-------------------------------------------------------------------------------------------------------------------------ATAATC---------CATATATCTTATATCTTTTATCCCACAGGCTGCTCAAGCCATGGGTGCGTCTGAGATCCTCATTACGGATCTTGTGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATTACGGATCTTGTGCA2016.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTCATTACGGATCTTGTGCA2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGGTGCGTCTGAG.......................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCATGGGTGCGTCTGAGATCCTC.................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGCCATGGGTGCGTCTGAG.......................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCATGGGTGCGTCTGAG.......................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGGTGCGTCTGAGATCCTC.................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGGGTGCGTCTGAGATC....................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCAAGCCATGGGTGCGTCTGAG.......................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCATGGGTGCGTCTGAGAT.....................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGCCATGGGTGCGTCTGA........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ACCCATTGGCCTGGTCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTATGTTAGCTTTACTT---AAT-------------------------------------------------------------------------------------------------------------------CGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGCCATGGGTGCGTCTG.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTGCGTCTGAGATCCT..................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAA------------TGCGCTCCTAATA------CT.......................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TGGCCTGGTCACTTTAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGCCATGGGTGCGTCTGAG.......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCTGAGAGC-----------------GAAGAATATTTCTAAA-........................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTGAGATCCTCATTACGGAT........2311.0010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCATGGGTGCGTCTGAGATCCT..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGCCATGGGTGCGTCTGA........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTGCGTCTGAGATCC...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................................................GTTAGCTTTACTT---AAT-------------------------------------------------------------------------------------------------------------------CGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTGCGTCTGAGATCC...................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............CCTGGGAGCAGGACCCATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TTAATGGTATGTTAGCTTTAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCAAGCCATGGGTGCGTCTG.........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGC-----------------GAAGAATATTTCTAAA-GG-------------------------------------------------------------------------------------------------------------------------.............................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCATGGGTGCGTCTGAGATC....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCATGGGTGCGTCTGAGATCCTCATT..............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...............TGGGAGCAGGACCCATTGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGGTGCGTCTGAGATCC...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTCTGAGATCCTCATTACGGA.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAAAGTTCTCATCCTGGGAGCAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
............TCCTGGGAGCAGGACCCATTGGCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AAAGTTCTCATCCTGGGAGCAGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCAAGCCATGGGTGCAAT...........................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................CAAA--AAAGGATGTTAGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CCAAGGTTCTCATCCTGGGAGCAGGACCCATCGGCCTGGTCACTCTGATGGTATGTTCACCTTATTCGAAAAT-------------------------------------------------------------------------------------------------------------------CATTTACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTAGATCCATACAAAAACAA--AAACGCTTTTTAATC----CGGTAGCGTTATTTACTAGGTTAACAA-------------------AGTATATTTTTGAAGTTTCTCTCC--A---ACAC-----AAAATTCTGCC---------------------------------------------------------AAGACTTAATACCTCCAA----GTA------------------------------------CAGGGAAC-----------------GAAGACTATTTTTAAAAAGATATTTTTTGTTTATAGGGTGCCTTATTAACTTTAGGTGAAAGCCAAGTATTTATCATTTTATAATGCAGGTTATTTGGGAAACTTTTTAAAATCGTATTTTTAAATAAGACAAATTGT-----------------------TTTTATTCCTTTTA-ACTACAGGCTGCTCAAGCCATGGGTGCGTCGGAGATCCTGATTACGGATCTAGTGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGATTACGGATCTAGTGCA2311.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCATGGGTGCGTCGGA........................1911.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCATGGGTGCGTCGGAGA......................2111.0010000010
.............CCTGGGAGCAGGACCCATCGGCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCATGGGTGCGTCGGAGATCCT..................2511.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGATTACGGATCTAGTGC.2011.0010000010
...........................CCATCGGCCTGGTCACTCTGATGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGCCATGGGTGCGTCGGAGATCC...................2611.0010000100
droYak3
CCAAAGTTCTCATCCTGGGAGCTGGACCCATCGGCCTGGTCACTCTGATGGTATGTTAGTTATAAAA-----GAAATAATTTT-------------------------------------------------------------------------------------------------------AT------------------------------------------------------------------------------------------------------------------------TATC---------------------CATAAAGGGTAA----CT--------------AA--AAAGGATGCTAGGTCCATACAAAAACGCTT---------------TGGATAGTGGCTTTAATTAAAAGGTTAACAA-------------------AGTATATTTTTCAAAGTTCTCTCCCCCAAAAAAGAACCCAAAATGTTGTC---------------------------------------------------------AAGATTAGTTATCTCAAA----ATATAGGGTAAATTCCGCTCGTAATATACCTATTATTTATTGAGAAT-----------------AAAGACTCATTTTAAAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................AA----CT--------------AA--AAAGGATGCTAGGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50101000000000
.CAAAGTTCTCATCCTGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50101000000000
............................CATCGGCCTGGTCACTCTGATGGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100100000000
...........ATCCTGGGAGCTGGACCCATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100000010000
.............................ATCGGCCTGGTCACTCTGATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50101000000000
........CTCATCCTGGGAGCTGGACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100100000000
...........ATCCTGGGAGCTGGACCCATCGGCCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000010000
........CTCATCCTGGGAGCTGGACCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50101000000000
...........ATCCTGGGAGCTGGACCCATCGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100010000000
droEug1
CCAAGGTTCTCATCCTGGGAGCAGGACCTATCGGCCTGGTCACTCTGATGGTAAGTTTATGTTAGCA---TGT-------------------------------------------------------------------------------------------------------------------GTAGTGTT----------------------------------------------------------------------------------------------------------------TAACCCTTCGACTTGCAGAAAGTTTCTTGATTAGCT-----CTAAAATCTTAAGTCAACTTAAAGG----------------------------------------------------------------TT---------------------------------------------------TATAAACAT---AGGTCTTGTTT---------------------------------------------------------TGTACTTCAT------------------------------------TA------CTTTCT---T-----AAATCTATAAATATATA------------------------------TAATATATATCTTGATAAACTCAAGGTTAAACTGGCTGATAAAGCTTTTTATAATACAGCTTATATTAG---CTTTCTAC---------------------------AGCAGATACCATAAAC------GACTCATGATTTTACTCTTCACAGGCTGCTCAAGCAATGGGCGCCTCTGAAATCCTGATCACAGACCTGCTGCASizeHit CountTotal NormTotal
No Reads
droBia1
CCAAGGTGCTCATCCTGGGAGCAGGACCCATCGGCCTGGTCACTCTAATGGTATGTTGACCTCGTTA---AAGAAAATATTTTAACTTTCTGGTGTTCATCGCGTAACATTTGAGTCTAACAATGGTATCTAACTGAGGGAGAATTTTAAAAAAATAAAATAGAAAATAAACCATGAGACATAGGTAT------------------------------------------------------------------------------------------------------------------------CATC---------------------CTTAAAGGCCAT----CT--------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTCTTATGCTAACAAAAAATAAGTTTC-----------------------ATGTAATCCT---------------------------AATATCTCTGAGATCCTGATCACGGATCTGCTGCASizeHit CountTotal NormTotal
No Reads
droTak1
AATATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAAAATTCGAAATTAAGA--------------------------------TCATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTTTTCCACCTTGCAGGCTGCTCAAGCCATGGGTGCCTCTGAGATTCTGATCACGGATCTGCTGCASizeHit CountTotal NormTotal
No Reads
droEle1
CCAAAGTGCTCATCCTGGGAGCAGGACCCATCGGACTGGTTACCCTGATGGTAAGTTAAATTAAATA---GGT-------------------------------------------------------------------------------------------------------------------AAATTAAA----------------------------------------------------------------------------------------------------------------TTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGACTCACAGGAAGTTAA------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TATAAGC-----------------------------AGAATACCATAAAAGTATTTTGAAGTGAATA---AAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTGTCTTATACTTTGCAGGCTGCTCAAGCCATGGGTGCCTCCGAGATCCTGATCACGGATTTGCTACASizeHit CountTotal NormTotal
No Reads
droFic1
GGAAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAGTTATTTTTAACAAA-------------------------------------------------------------------------------------------------------------------------TAATAA---------CTTATACTTTCTACTTTTCTCTTAACAGGCTGCTCAGGCCATGGGTGCATCAGAGATCCTGATCACGGACTTGCTGCASizeHit CountTotal NormTotal
No Reads
droKik1
CCAAGGTGCTCATCCTGGGAGCGGGACCCATTGGCTTGGTCACTCTGCTGGTGAGTTATCATTGGAA-----T-------------------------------------------------------------------------------------------------------------------TGCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATAATATTAAATTGAGATTCATAAAGAAATTATAGGTATTAATATTACTTCATAAACATTTTAAACTA----ACTAA------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGACTTTGCAGGCTGCTCAATCCATGGGTGCCTCTGAGATCCTGATTACTGATCTGCTACASizeHit CountTotal NormTotal
No Reads
droAna3
ATATATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTTACCTTTCTAACAGGCGGCTCAAGCCATGGGTGCTTCTGAGATTCTCATCACTGACTTGGTGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGCTCAAGCCATGGGTGCTTCT..........................2511.001100000
droBip1
TTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTTGGCTGCCCAATCCATGGGTGCCTCAGAGATCTTGATCACGGATCTTCTTCASizeHit CountTotal NormTotal
No Reads
dp5
TTCAGAAGGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTATAGGA-------AACTTATCTTGCCCGCTTTTTAGGTTGCTCAATCCATGGGCGCCTCAGAGATTCTCATCACGGACTTGGAACASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGGA-------AACTTATCTTGCCCGCTTTTTAG..................................................2911.0010010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGATTCTCATCACGGACTTG.....2311.0010000100000
droPer2
GAAACCC----------------------ATTAGTTTTATTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG------------TGGACTTGTATTTAATATTTTCCCTCACCTAGGTCGCTCAAGCCTTGGGAGCTTCTGAGATTTTGATCACAGATTTGGTGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
CAAAGGTTGCCATTCTGGGAGCCGGACCTATTGGATTGGTGACGTTGTTGGTGAGTGAAAAT------------------------------------------------------------------------------------------------------------------------------AGATTACAATTATTAAAGGCAAACGAGACCCAATTTTTGACAAAGTGATAAGAAACTCTAATCACAAGGGGCCCCTACTGAATGAACCGAATCTATGAGTTTCTCAATTATTTTATGTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAAAACCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGTTGATCTTAAAGATATTTAC------------T----------TTACTCTTATTTGTCTTTCAGACTGCCCAATCGATGGGAGCTTCCGAGATATTGATTACAGATCTGGTACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....GTTGCCATTCTGGGAGCCGGACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
.....GTTGCCATTCTGGGAGCCGGACCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATTACAGATCTGGT...1811.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATATTGATTACAGATCTGGTA..2411.00100010
...........................CTATTGGATTGGTGACGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.AAAGGTTGCCATTCTGGGAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGATTACAGATCTGGT...2011.00100010
.......................GGACCTATTGGATTGGTGACGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..................GAGCCGGACCTATTGGATTGGTGACGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
..................GAGCCGGACCTATTGGATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
droVir3
ATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATTTTAAGTGTTTAAGGTCGCACAATCTATGGGTGCTACAAAGATTTTAATTACGGACTTGGTGCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTATGGGTGCTACAAAGATT....................2211.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAATTACGGACTTGGTGC.2011.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATTTTAATTACGGACTTGGT...2411.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCTATGGGTGCTACAAAG.......................2111.001000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTTTAATTACGGACTTGGT...2211.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATCTATGGGTGCTACAAAGATTTT..................2711.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATTTTAATTACGGACTTGGTG..2511.001100000000000000000000000000000000000000000000000000000000000000
droMoj3
TCAATTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAATTTGTT-TTATTTATAGGTAGCACAATCTTTGGGAGCCACGGAGATTCTGATTACGGATTTAGTACASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGAGCCACGGAGATTCTGATTAC............2711.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATCTTTGGGAGCCACG..........................1911.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCACAATCTTTGGGAGC..............................2011.001000001
droGri2
CGTATAT---------------------------------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAG------------TAA-------ACTTTTATTCA-ATGCTTTAAGGTTGCGCAATCAATGGGTGCCACTGAGATTTTAATTACGGATTTAGTGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAATCAATGGGTGCCACTGAGATTTT..................2811.00110

Generated: 05/18/2015 at 05:49 PM