ID:

dsi_23748

 Coordinate:

3l:9749043-9749192 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.0

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
(TTTA)nSimple_repeatSimple_repeat+
I_DMLINEI-
mature
  1. 2l:17797600-17797626 -
  2. 2l:22013938-22013964 -
  3. 2l:22203190-22203216 +
  4. 2r:9679379-9679405 +
  5. dsi_23748  3l:9749160-9749186 +
  6. 3l:20285934-20285960 +
  7. 3l:21916508-21916534 -
  8. 3l:22412897-22412923 -
  9. 3l:23604922-23604948 -
  10. 3l:23979512-23979538 +
  11. 3l:24067193-24067219 -
  12. 3r:3077767-3077793 -
  13. 3r:12907819-12907845 -
  14. 3r:21457304-21457330 -
  15. x:9358392-9358418 -
  16. x:20838731-20838757 +
  17. node_76189:8-34 -
  18. node_53270:4-30 -
  19. node_59901:1795-1821 +
  20. node_41755:3003-3029 +
  21. 2r:7847-7873 -
  22. 3l:753653-753679 -
  23. 3l:23412237-23412263 -
  24. x:20783883-20783909 -
  25. node_99675:19-45 -
star
  1. 2l:11193514-11193537 -
  2. 2l:17797632-17797655 -
  3. 2l:22013970-22013993 -
  4. 2l:23115081-23115104 -
  5. 3l:12706683-12706706 +
  6. 3l:22412929-22412952 -
  7. 3l:23412269-23412292 -
  8. 3l:23604954-23604977 -
  9. 3l:24067225-24067248 -
  10. 3r:3077799-3077822 -
  11. 3r:14113527-14113550 -
  12. 3r:21457336-21457359 -
  13. x:9358424-9358447 -
  14. x:16336832-16336855 -
  15. x:20838702-20838725 +
  16. node_76189:40-63 -
  17. node_53270:36-59 -
  18. node_11516:3844-3867 +
  19. node_123855:37-60 -
  20. node_41949:85-108 -
  21. 2r:9679350-9679373 +
  22. 2r:19073304-19073327 +
  23. dsi_23748  3l:9749131-9749154 +
  24. 3l:20285905-20285928 +
  25. 3l:23979483-23979506 +
  26. dsi_2495  node_59901:1766-1789 +
  27. node_41755:2974-2997 +

Sense Strand Reads

ATTTTCCCCCGAAAGCCCAGCTTAAAATGCGACATAATATTTTGCCTAAATATTTTTCCACAACCGACCGAGTTTGGTTGCAAAATATTTTAGCAGAAAGCGGTCAATTCAATGGGTAAATGCGACAAATTAAGTATTTATTTATTTATTTATTATGATAGATAGAATAGTTTACAAAACTAGACTAACTTAGATAGTAGGAGCTAGATTGTTTCGGAGGTGAGGACGGATGAATATGGGGGCAGTATGC
******************************************************************************************************************************************..........((((.......((.(((..((((((...))))))..))).))))))******************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 O001
Testis
 SRR902009
testis
 M053
female body
 M025
embryo
 M024
male body		 M023
head
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGCAG..... 25 0 3 14.00 42 20 6 2 0 0 12 0 2 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATGAA................ 25 0 9 13.11 118 13 5 27 27 20 14 11 0 1 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGCAGTA... 27 0 2 10.50 21 10 7 0 0 0 3 0 1 0 0 0 0
.......................................................................................................................................................................TAGTTTACAAAACTAGACTAACTTAGA........................................................ 27 0 20 10.35 207 0 28 105 0 74 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGCAGT.... 26 0 3 9.67 29 14 7 1 0 0 6 0 0 1 0 0 0
.....................................................................................................................................................................................................................TCGGAGGTGAGGACGGATGAATATGGG.......... 27 0 3 9.00 27 6 3 11 0 5 1 0 0 1 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATGAATA.............. 27 0 9 7.56 68 3 3 28 6 16 7 0 0 5 0 0 0
....................................................................................................................................................................................................................................GATGAATATGGGGGCAGTAT.. 20 0 2 7.00 14 0 0 0 0 0 0 14 0 0 0 0 0
.............................................................................................................................................................................................................................GAGGACGGATGAATATGGGGGCAGTA... 26 0 2 6.50 13 3 8 0 0 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCGGAGGTGAGGACGGATGAATA.............. 24 0 9 4.44 40 7 1 12 3 6 0 11 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGCA...... 24 0 3 4.33 13 2 6 1 0 0 3 0 1 0 0 0 0
..................................................................................................................................................................................................................................CGGATGAATATGGGGGCAGTA... 21 0 2 4.00 8 0 0 0 0 0 1 7 0 0 0 0 0
.................................................................................................................................................................................................................................ACGGATGAATATGGGGGCAGTATGC 25 0 2 3.50 7 1 5 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GACGGATGAATATGGGGGCAGTATGC 26 0 2 3.00 6 0 5 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGA.................... 21 0 11 3.00 33 2 1 6 6 0 2 14 0 0 2 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATG.................. 23 0 9 2.44 22 0 0 1 8 1 12 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATGA................. 24 0 9 2.33 21 0 0 0 5 0 5 11 0 0 0 0 0
.............................................................................................................................................................................................................................GAGGACGGATGAATATGGGGGCAGT.... 25 0 3 2.33 7 3 3 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGGATGAA................ 26 0 9 2.22 20 4 0 2 8 4 0 0 0 2 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATGAAT............... 26 0 9 2.11 19 4 1 7 6 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCGGAGGTGAGGACGGATGAATATGGG.......... 28 0 3 2.00 6 0 1 2 0 2 0 0 0 1 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGG........ 22 0 3 2.00 6 2 3 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGC....... 23 0 3 1.67 5 1 2 0 0 1 1 0 0 0 0 0 0
...........................................................................................................................................................TGATAGATAGAATAGTTTACAAAACT..................................................................... 26 0 20 1.55 31 27 0 3 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCGGAGGTGAGGACGGATGAATAT............. 25 0 8 1.50 12 0 0 2 4 4 2 0 0 0 0 0 0
...............................................................................................................................................................................................................ATTGTTTCGGAGGTGAGGAC....................... 20 0 12 1.33 16 0 0 0 0 0 0 15 0 0 0 1 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATGAAA............... 26 1 9 1.33 12 5 0 2 2 0 1 0 1 0 1 0 0
....................................................................................................................................................................................................................................GATGAATATGGGGGCAGT.... 18 0 3 1.33 4 0 0 0 4 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCGGAGGTGAGGACGCACGAATATGGG.......... 27 2 3 1.33 4 0 0 0 0 4 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GATTGTTTCGGAGGTGAGGAC....................... 21 0 12 1.25 15 0 0 0 0 0 0 15 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGAT................... 22 0 10 1.20 12 0 0 0 7 1 4 0 0 0 0 0 0
........................................................................................................................................................................................................CAGGTAGATTGTTTCGGAAGT............................. 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGCACGAATATGGGGGCAGTA... 27 2 2 1.00 2 0 0 0 0 2 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGGG......... 21 0 3 1.00 3 1 1 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGAAGTA... 27 1 3 1.00 3 0 2 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGTGAGGACGGATGAATATGGGGGCAG..... 27 0 3 1.00 3 2 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCGGAGGTGAGGACGGATGAATATGG........... 27 0 8 1.00 8 2 1 2 0 1 1 0 0 1 0 0 0
..............................................................................................................................................................................................................................AGGACGGATGAATATGGGGGCAGTAA.. 26 1 2 1.00 2 0 0 0 0 0 0 0 2 0 0 0 0
.....................................................................................................................................................................................................................TCGGAGGTGAGGACGGATGAATATGGGG......... 28 0 3 1.00 3 0 0 1 0 1 0 0 0 1 0 0 0
....................................................................................................................................................................................................................................GATGAATATGGGGGCAGTATGC 22 0 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GATTGTTTCGGAGGTGAGGACGGA.................... 24 0 10 0.90 9 1 1 3 1 2 1 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGGATGA................. 25 0 9 0.89 8 0 0 1 4 1 0 0 0 0 2 0 0
..........................................................................................................................................TATTTATTTATTTATTATGATAGATAGA.................................................................................... 28 0 20 0.85 17 0 0 12 0 5 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGGA.................... 22 0 11 0.82 9 1 2 3 2 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGGATG.................. 24 0 9 0.78 7 0 0 0 4 1 2 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGAAGT.... 26 1 4 0.75 3 1 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCGGAGGTGAGGACGGATGAATATGG........... 26 0 8 0.75 6 2 0 0 0 1 3 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGG......................... 16 0 14 0.71 10 0 0 0 10 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAAT............... 15 0 10 0.70 7 0 6 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GGACGGATGAATATGGGGGCAG..... 22 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AGGACGGATGAATATGGGGGC....... 21 0 3 0.67 2 0 0 0 1 0 0 0 0 0 0 1 0
..........................................................................................................................................................................................................................GGTGAGGACGGATGAATATGGGGGC....... 25 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GTGAGGACGGATGAATATGGG.......... 21 0 3 0.67 2 0 0 0 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GAGGACGGATGAATATGGGGGCAG..... 24 0 3 0.67 2 0 1 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGG..................... 20 0 11 0.64 7 0 0 0 5 2 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATGAATAT............. 28 0 8 0.63 5 0 0 2 1 2 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACG...................... 19 0 13 0.62 8 0 0 0 8 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGGAT................... 23 0 10 0.60 6 1 0 2 3 0 0 0 0 0 0 0 0
..........................................................................................................................................TATTTATTTATTTATTATGATAGA........................................................................................ 24 0 20 0.55 11 3 1 7 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................GATGAATATGGGGGCAGTATG. 21 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGCAGTAC.. 28 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................GAGTATGGTTGCAAA...................................................................................................................................................................... 15 1 6 0.50 3 0 0 3 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CGGATGAATATGGGGGCAGTATGC 24 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGCAA..... 25 1 4 0.50 2 0 0 0 0 0 1 0 1 0 0 0 0
.............................................................................................................................................................................................................................GAGGACGCACGAATATGGGGGCAGTA... 26 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CGGATGAATATGGGGGCAGTATG. 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGAAG..... 25 1 4 0.50 2 0 0 0 0 0 2 0 0 0 0 0 0
....................................................................................................................................................................................................................................GATGAATACGGGGGCAGTATGC 22 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GGACGGATGAATATGGGGGCAGTATGC 27 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................TGAATATGGGGGCAGTATG. 19 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................AATATGGGGGCAGTATGC 18 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCGGAGGTGAGGACGGATGAATAT............. 24 0 8 0.38 3 0 0 0 0 2 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCGGAGGTGAGGACGGATGAATATG............ 26 0 8 0.38 3 1 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGG..................... 21 0 11 0.36 4 1 0 0 3 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TTTACAAAACTAGACTAACTTAGA........................................................ 24 0 20 0.35 7 0 0 3 0 4 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCGGAGGTGAGGACGGATGAAT............... 23 0 9 0.33 3 0 0 1 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CGAGGACGGATGAATATGGGG......... 21 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGTGAGGACGGATGAATATGGG.......... 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TAGATTGTTTCGGAGGC............................. 17 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AGGACGGATGAATATGGGG......... 19 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGCAGTT... 27 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AGAGGACGGATGAATATGGGGGC....... 23 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GAGGACGGATGAATATGGGGGC....... 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................ACGGATGAATATGGGGGCAGTT... 22 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................GGACGGATGAATATGGGGG........ 19 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................AGGACGGATGAATATGGGGGCAGTATT. 27 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGATGACGGATGAATATGGGGGCAG..... 25 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................................GACGGATGAATATGGGGGCAG..... 21 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................TTCGGAGGTAAGGACGGATGAATATGGG.......... 28 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................AAGGACGGATGAATATGGGGGCAGTA... 26 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ATGAATATGGGGGCAGT.... 17 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGTGAGGACGGATGAATATGGGGG........ 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................GATGAATATGGGGGCA...... 16 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATGAAAA.............. 27 1 9 0.33 3 2 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................GAATATGGGGGCAGT.... 15 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GTTGAGGACGGATGAATATGGG.......... 22 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................ACGGATGAATATGGGGGCAG..... 20 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................GTGAGGACGGATGAATATGGGGGCAG..... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCGGAGGTGAGGACGGATGAATATGGGGT........ 29 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCGGAGGTAAGGACGGATGAATATGGG.......... 27 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCGGAGGTGACGACGGATGAATATGGG.......... 27 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CGGATGAATATGGGG......... 15 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CGGATGAATATGGGGGCAGTTA.. 22 2 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGCCG..... 25 1 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGG.......... 20 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCGGAGGTGAGGACGGATGAATA.............. 23 0 9 0.33 3 1 0 0 0 0 2 0 0 0 0 0 0
......................................................................................................................................................................................................................................TGAATATGGGGGCAGT.... 16 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATCTGGGGGCAGT.... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TAAGGACGGATGAATATGGGGGCAGTA... 27 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................................GACGGATGAATATGGGGGAAGTATGC 26 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGC........ 22 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTAGGACGGATGAATATGGGGGCAGT.... 26 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGAC....................... 18 0 13 0.31 4 0 1 0 3 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTAAGGACGGATGAATA.............. 27 1 10 0.30 3 1 0 0 0 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTGGGAGGTGAGGACGGATGAA................ 25 1 10 0.30 3 0 0 0 0 0 3 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTAAGGACGGATGAA................ 25 1 10 0.30 3 0 0 0 1 2 0 0 0 0 0 0 0
.......................................................................................................................................................................TAGTTTACAAAACTAGACTAACTTAGAA....................................................... 28 1 20 0.30 6 2 1 3 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTGAGG......................... 17 0 14 0.29 4 0 0 0 4 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGTGAGGACGGATGAATATGGGGGA....... 26 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................CGGATGAATGTGGGGGCGGT.... 20 2 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATG............ 18 0 8 0.25 2 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TAGTTTACAAAACTAGA.................................................................. 17 0 20 0.25 5 2 0 3 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TAAGGACGGATGAATATGGGG......... 21 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGCA....... 23 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGTAAGGACGGATGAATATGGGGGCA...... 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGTGAGGACGGATGAATATGGGGCAG...... 26 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGTGAGGACGGATGAATATGG........... 21 0 8 0.25 2 0 0 0 2 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TAAGGACGGATGAATATGGGGGCAG..... 25 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATAAATATGGGGGCA...... 24 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGCAG...... 24 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCGGAGGTGAGGACGGATGAATATG............ 25 0 8 0.25 2 0 0 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCGGAGGTGAGGACGGACGAATA.............. 24 1 9 0.22 2 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TTTCGGAGGTGAGGACGGATG.................. 21 0 9 0.22 2 0 0 0 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCGGAGGTGAGGACGGATGAA................ 22 0 9 0.22 2 0 0 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GTGAGGACGGATGAATA.............. 17 0 9 0.22 2 0 0 0 2 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGGATGAAA............... 27 1 9 0.22 2 0 0 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGGATGAATA.............. 28 0 9 0.22 2 0 0 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGTGAGGACGGATGAATA.............. 18 0 9 0.22 2 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGA........................ 17 0 14 0.21 3 0 0 0 3 0 0 0 0 0 0 0 0
..................................................................................................................................................TATTTATTATGATAGATAGAATAGTT.............................................................................. 26 0 20 0.20 4 1 1 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGTGAGGACGGATGAA................ 16 0 10 0.20 2 0 0 0 2 0 0 0 0 0 0 0 0
..............................................................................................................................................TATTTATTTATTATGATAGATAGA.................................................................................... 24 0 20 0.20 4 0 0 4 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGCAT..... 25 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................TTACAAAACTAGACTAACTTAGA........................................................ 23 0 20 0.20 4 0 0 2 0 2 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGCACGAA................ 25 2 11 0.18 2 0 0 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGCACGAAT............... 27 2 11 0.18 2 0 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGCAAA.... 26 2 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TATTATGATAGATAGAGTAGTTTACA.......................................................................... 26 1 20 0.15 3 0 0 1 0 2 0 0 0 0 0 0 0
.........................................................................................................................................TTATTTATTTATTTATTATGATAGA........................................................................................ 25 0 20 0.15 3 2 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................TATTATGATAGATAGAATAGTTTACAAA........................................................................ 28 0 20 0.15 3 0 0 1 0 2 0 0 0 0 0 0 0
............................................................................................................................................................................TACAAAACTAGACTAACTTAGA........................................................ 22 0 20 0.15 3 0 2 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TGATAGATAGAATAGTTTACAAAA....................................................................... 24 0 20 0.15 3 2 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TATGATAGATAGAATAGTTTACAAAA....................................................................... 26 0 20 0.15 3 1 0 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAG.......................... 15 0 14 0.14 2 0 0 0 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TAGATAGTCGGACCTTGAT......................................... 19 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGA........................ 18 0 14 0.14 2 0 0 0 2 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCGGATGTGAGGACGGATGAATAT............. 24 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TGGGAGGTGAGGACGGATGAATATGG........... 26 1 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................GAGGGGAGGACGGATGAATAT............. 21 1 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATATA............ 18 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGTGAGGACGGATGAATATG............ 20 0 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GGAGGTGAGGACGGATGAATATGG........... 24 0 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GGAGGTGAGGACGGATGAATATG............ 23 0 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TGCGGAGGTGAGGACGGATGAATA.............. 24 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGGGAGGACGGATGAATA.............. 27 1 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATGGT................ 25 2 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATGAC................ 25 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GGAGGTGAGGACGGATGAATA.............. 21 0 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CCTGTTTCGGAGGTAAGGACGGATGA................. 26 3 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCGGAGGTGAGGACGGATG.................. 20 0 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCGGAGGTAAGGACGGATGAATAA............. 25 2 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCGGAGGTAAGGACGGATGAATAT............. 25 1 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................TTTAGCGGAAAGCGGT.................................................................................................................................................. 16 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TAGATTGTTCCGTAGGT............................. 17 2 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TCGATTGTTTCGGAGGTGAGGACGGAT................... 27 1 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GGTTTCGGAGGTGAGGACGGATGAA................ 25 1 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GAGGTGAGGACGGATGAATA.............. 20 0 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TTTTTCGGAGGTGAGGACGGATGAATA.............. 27 1 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GTTTCGGAGGTGAGGACGGATGAA................ 24 0 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGGTGAA................ 25 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATGAAC............... 26 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACTGATGAA................ 25 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAAGACGGATGAATA.............. 27 1 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAATAAA............ 18 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGAAGA................. 24 1 9 0.11 1 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................GAGGACGGATGAATA.............. 15 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GTTTCGGAGGTGAGGACGGATGAATA.............. 26 0 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGAACGGATGAA................ 25 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGCGAGGACGGATGAATA.............. 27 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CGTTTCGGAGGTGAGGACGGATG.................. 23 1 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCGGAGGTGAGGACGGATGA................. 21 0 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCGGAGGTAAGGACGGATGAATAT............. 24 1 9 0.11 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................TTATTTATTTATTTATTATGATAGATAGA.................................................................................... 29 0 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTGGGAGGTGAGGACGGATGA................. 25 1 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTAAGGACGGATGAAT............... 26 1 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................ATTGTTTCGGAGGTGAGGACGGA.................... 23 0 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTAAGGACGGATG.................. 23 1 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCGGAGGTGAGGACGGAT................... 19 0 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................TATTTATTATGATAGATAGAATAGT............................................................................... 25 0 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TGATAGATAGAATAGTTTACAAAAC...................................................................... 25 0 20 0.10 2 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGTGAGGACGGATGAA................ 17 0 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TAGTTTACAAAACTAGACT................................................................ 19 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCGGAGGTGAGGACGCACGAATATGG........... 27 2 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TTATTTATTATGATAGATAGAATAGTT.............................................................................. 27 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TATTATGATAGATAGAATAGTTTACA.......................................................................... 26 0 20 0.10 2 0 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTAAGGACGGATGAATA.............. 28 1 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTAAGGACGGAT................... 22 1 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................GGACAGATGATTAGGGGGG........ 19 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................................................TTGTTTGGGAGGTGAGGACGGAT................... 23 1 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................GTTTCGGAGGTGAGGACGCACGAATA.............. 26 2 11 0.09 1 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................................TTCGGAGGTGAGGACGCACGAATA.............. 24 2 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGATGTGAGGACGGA.................... 21 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGCATGAA................ 25 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTGGGAGGTGAGGACGGAT................... 22 1 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGTATGAA................ 25 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCGGAGGTGAGGACGGA.................... 18 0 11 0.09 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGCACGAAT............... 26 2 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGAAC.................. 23 2 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGGAA................... 23 1 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GGAGGTGAGGACGGAT................... 16 0 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GATTGTTTGGGAGGTGAGGACGG..................... 23 1 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTGGGAGGTGAGGACGGA.................... 22 1 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................GGTGTTTCGGAGGTGAGGAC....................... 20 2 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGCACG.................. 23 2 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................ATTGTTTCGGAGGTGAGGACG...................... 21 0 12 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGC..................... 20 1 13 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACA...................... 19 1 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACG...................... 20 0 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCGGAGGTGAGGAC....................... 15 0 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GATTGTTTCGGAGGTG............................ 16 0 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGCAC................... 22 2 13 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACT...................... 20 1 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGAC....................... 19 0 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGCA.................... 22 1 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGCAC................... 23 2 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACT...................... 19 1 13 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGCGGACGGATGAAT............... 15 1 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTGGGG......................... 17 1 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TTGTTTCGGAGGTGAG.......................... 16 0 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................AGTATGGTTGCAAAA..................................................................................................................................................................... 15 1 16 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GAGGTGAGGACGCACGAA................ 18 2 18 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................TTATGATAGATAGAGTAGTTTACAAA........................................................................ 26 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TATGATAGATAGAATAGTTTACAAAAC...................................................................... 27 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................TATTTATTATGATAGATAGAGTAGT............................................................................... 25 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................TAGTTTACAAAACTACACTAACTTAGA........................................................ 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GTCTGAATATGGGGGC....... 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................CACAACCGACCGATCCTG.............................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
..............................................................................................................................................TATTTATTTATTATGATAGAT....................................................................................... 21 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................TTATGATAGATAGAATAGTTTACAA......................................................................... 25 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................TAGAGTAGTTTACAAAACTAGACTAACT............................................................ 28 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................TATTTATTTATTTATTATGATAGAT....................................................................................... 25 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TATTTATTATGATAGGTAGAATAGT............................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TATTATGATAGATAGA.................................................................................... 16 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGGATGAAAAA............. 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TACAAAACTAGACTAACT............................................................ 18 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................TTATTTATTTATTATGATAGATAGA.................................................................................... 25 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................TATTATGATAGATAGAGTAGTTTACAAA........................................................................ 28 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................TGATAGATAGAATAGTTTACAAAACA..................................................................... 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TAGTTTACAAAACTAGACTAACTT........................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................ATCTGGGGGGAGTATG. 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................TATTGTGATAGATAGAATTTTT.............................................................................. 22 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TAGTTTACAAAACTAGACTAACT............................................................ 23 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TTATGATAGATAGGATAGTTTT............................................................................ 22 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TATGATAGATAGAATAGTTTAC........................................................................... 22 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................TTATTATGATAGATAGAATAGTTTACAA......................................................................... 28 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................TTTATTATGATAGATAGAATAGTTT............................................................................. 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TATTATGATAGATAGAATAGTTTACAAAA....................................................................... 29 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................AGTTTACAAAACTAGACTAACTTAGAT....................................................... 27 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................TGATAGATAGAATAGT............................................................................... 16 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................TACAAAACTAGACTAACTTAGAT....................................................... 23 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TATTATGATAGATAGAATAGTTTAC........................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TAGTTTACAAAACTAGACTAACTTAG......................................................... 26 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................TATTTATTTATTATGATAGATAGAGTA................................................................................. 27 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TTTACAAAACTAGACTAACT............................................................ 20 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TAGTTTACAAAACTAGACTAACTTAGAT....................................................... 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TTATTATGATAGATAGAGTAGTTTACAAAA....................................................................... 30 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TATTATGAGAGATAGAGTAGTTTACA.......................................................................... 26 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................TAGTTTACAAAACTAGAATAACTTAGA........................................................ 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TTATAGATAGAATAGTTTACAAAACT..................................................................... 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TATTATGATAGATAGAGTAGTTTACAAAA....................................................................... 29 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................ATAGATAGAATAGTTTACAAAACTAGA.................................................................. 27 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AAGTTTACAAAACTAGACTAACTTAGA........................................................ 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TTATTATGATAGATAGA.................................................................................... 17 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................AGTTTACAAAACTAGACTAACTTAGA........................................................ 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TAAAAGGGGGCTTTCGGGTCGAATTTTACGCTGTATTATAAAACGGATTTATAAAAAGGTGTTGGCTGGCTCAAACCAACGTTTTATAAAATCGTCTTTCGCCAGTTAAGTTACCCATTTACGCTGTTTAATTCATAAATAAATAAATAAATAATACTATCTATCTTATCAAATGTTTTGATCTGATTGAATCTATCATCCTCGATCTAACAAAGCCTCCACTCCTGCCTACTTATACCCCCGTCATACG
********************************************************..........((((.......((.(((..((((((...))))))..))).))))))****************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 O002
Head
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 GSM343915
embryo
 M025
embryo
 M024
male body
..................................................................................................................................................................................................................................GCCTACTTATACCCCCGTCATAC. 23 0 2 3.00 6 6 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................ATACTATCTATCTTATCAAATGTT......................................................................... 24 0 20 1.55 31 0 0 12 19 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CTCCTGCCTACTTATACCCCCGTCAT... 26 0 2 1.50 3 0 1 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................CCTCCACTCCTGCCTACTTATAC............ 23 0 8 1.38 11 11 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CACTCCTGCCTACTTATAC............ 19 0 8 1.38 11 11 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................AACAAAGCCTCCACTCCTGCCT.................... 22 0 11 1.27 14 0 0 0 0 0 14 0 0 0 0 0 0
.................................................................................................................................................................................................................ACAAAGCCTCCACTCCTGCCTAC.................. 23 0 9 1.22 11 11 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GCCTCCACTCCTGCCTAC.................. 18 0 9 1.22 11 11 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CCTCCACTCCTGCCTACTT................ 19 0 10 1.20 12 12 0 0 0 0 0 0 0 0 0 0 0
........................................................AGGTGTAGGCTGGCTC.................................................................................................................................................................................. 16 1 2 1.00 2 0 1 1 0 0 0 0 0 0 0 0 0
........................................................AGGTGTTGGCTGGCTC.................................................................................................................................................................................. 16 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................GGTGTAGGCTGGCTC.................................................................................................................................................................................. 15 1 4 0.75 3 0 3 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CTCCACTCCTGCCTACTTATACCC.......... 24 0 3 0.67 2 0 0 1 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................................................................................CCACTCCTGCCTACTTATACCCCCGT...... 26 0 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGCCTCCACTCCTGCCTACTTATAC............ 25 0 8 0.63 5 0 0 2 1 2 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CTGCCTACTTATACCCCCGTCAT... 23 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................TATTAAATCGTATTACGCCAGT................................................................................................................................................ 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................CCTGCCTACTTATACCCCCGTCAT... 24 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................AATGCCTACTTATACCCCCGTCAT... 24 2 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0
......................................................................................................................TTACGCGGTTTAATACGTAAAT.............................................................................................................. 22 3 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0 0
.......................................................AAGGTGTAGGCTGGC.................................................................................................................................................................................... 15 1 10 0.40 4 0 1 3 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CTCCACTCCTGCCTACTTATACCCCCGT...... 28 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CTGCCTACTTATACCCCCGT...... 20 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................CCACTCCTGCCTACTTATACCCCCG....... 25 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................CCCTGCCTACTTATACCC.......... 18 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................ACTCCTGCCTACTTATACCCCCGT...... 24 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CTCCTGCCTACTTATACCCCCGT...... 23 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................CTCCTGCCTACTTATACCCCCTTCAT... 26 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................CAAGGTGTAGGCTGGCTC.................................................................................................................................................................................. 18 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................AGGTGTAGGCTGGCTCT................................................................................................................................................................................. 17 2 13 0.31 4 0 3 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................ATAATACTATCTATCTTATCAAATGT.......................................................................... 26 0 20 0.25 5 0 5 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TCCTGCCTACTTATACCCCCTT...... 22 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................AAGGCGTAGGCTGGCTCCA................................................................................................................................................................................ 19 3 13 0.15 2 0 0 1 0 0 0 0 0 0 0 0 1
......................................................................................................................................................ATAATACTATCTATCTTATCAAATGTTT........................................................................ 28 0 20 0.15 3 0 0 0 3 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................ACAAAGCCTCCACTCCT........................ 17 0 14 0.14 2 0 0 0 0 2 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CTAACAAAGCCTCCACTCCTGCCTACTT................ 28 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................AAAGCCTCCACTCCTGCCTACTTATAC............ 27 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CTCCTGCCTACTTATACC........... 18 0 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................GCCTCCACTCCTGCCTACTTATAC............ 24 0 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CTCCACTCCTGCCTACTTATA............. 21 0 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................AAGGCGTAGGCTGGCTC.................................................................................................................................................................................. 17 2 16 0.13 2 0 0 2 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CAAAGCCTCCACTCCTGCCTACTTAT.............. 26 0 9 0.11 1 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................AATACTATCTATCTTATCAAATGTTT........................................................................ 26 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0
.........................................................................................................................................................ATACTATCTATCTCATCAAATGTT......................................................................... 24 1 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0
.................................................................................................................................................................................................................ACAAAGCCTCCACTCCTGCGTGCTT................ 25 2 11 0.09 1 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................GCAAGGTGTAGGCTGGCTC.................................................................................................................................................................................. 19 3 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0
....AGGGGGGTTCCGGGTCG..................................................................................................................................................................................................................................... 17 2 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AGCTAACAAAGCCTCCATTCCT........................ 22 2 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TTGATCTCATTGAAGCT........................................................ 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CAAATGGGTTGATCTGAT............................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
..............................................................................................................................................................................GTTTTGATCTGATTGAATCGAT...................................................... 22 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TCTAATGTTTTGATCTGATTGAATCT........................................................ 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................ATAAATAAATAAATAATACTATCTATCT.................................................................................... 28 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CAAATGTTTTGATCTGATTGAATCTAT...................................................... 27 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:9748993-9749242 + dsi_23748 ATT--------TTCCCC------CGAAAGC-CCAGCTTAAAAT-GCGA---------CATAATATTTTGCCTAAATA--TTTTTCCACAACCGACCG-AGTTTGGTTG-CAAAATATTTTAGCAGAAAGCGGTCA-----------ATTC--------------------AATGGGTAAATGCGACAAATTAAGTATTTATTTATTTATTTATTATGATAGATAG--AATAGTTTACAAAACTAGACTAACTTAGATAGTAGGAGCTAGATTGTTTCGGAGGTGAGGACGGATGAATATGGGGGCAGTATGC
droSec2 scaffold_0:2221216-2221351 + ATT--------TTCCCC------C-AAAGC-CCAGCTTAAAAT-GCGA---------CATAATATTTTGCCTATATA--TTTTTCCACAACCGACCG-AGTTTGGTTG-CAAAATATTTTAGCAGAAAGCGGTCA-----------ATTT--------------------AATGGGTAAATGCGACAAATTAAGTAT-------------------------------------------------------------------------------------------------------------------
dm3 chr3L:9997955-9998091 + ATT--------TTTCCC------CCAAAGC-CCAGCTTAAAAT-GCGA---------CATAATATTTTGCCTAAATA--TTTTTCCACAACCGACCG-AGTTTGGTTG-CAAAATATTTTAGCAGAAAGCGGTCA-----------ATTC--------------------AATGGGTAAATGCGACAAATTAAGTAT-------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4784:9983292-9983428 + ATT--------TTC-CC--------AAAGG-CCAGCTTAAAAT-GCGG---------CAAAATATTTTGCCAAAACACATTTTTCCACAACCGACCA-AGTTAGGTTTGCAAAATATTTTAGCAGAAAGCGGCCA-----------GTTC--------------------AACGGGTAAATGCGACAAATTAAGTAT-------------------------------------------------------------------------------------------------------------------
droYak3 3L:9974455-9974647 + ATT--------TTC-CC--------AAAGG-CCAGCTTAAAAT-GCGG---------CAAAATATTTTGCCAAAATA--TTTTTCCACTGCCGGCCG-TGTTCGGTTG-CAAAATATTTTAGCAGAAAGCGGCCA--AT--TGCCAATTC--------------------AACGGGTAAATGCGACAAATTAAGTATA-----AAGCACGTGCGGCAAGCGATTGAATGATGTTTTCAACGCGAGATTAACACA----------------------------------------------------------
droEug1 scf7180000409711:1850323-1850436 + ATT--------TGC-CC------T-TAAGC-TCAGCTTAAACT-ACTATGTCTGA--CCAAATATTATGCCAAAATA--TTCTATCATAGCTGACCG-AATTCAATGG-CAAAAC----------------------------------------------------------AAGGCAATGCCACAAATTAAGTA--------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302428:7766601-7766745 - ATT--------TGC-CC------T-AAAGC-CAGGCTTAAAAACATTGTATACAG--GCAAAGAATATGCAATAATAT-TTATTCCATAACTGACCGGAATTATGTTG-TAAAACATTTCGACAGCCGGTGGTCG-----------TATC--------------------AACGAGTAAATGCAACAAATTAGGGAT-------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415269:24545-24692 - ATT--------TGC-CTGTAGGGCAAATGC-CCGGCTTAAAAC-ACTGAATTTGA--GCCAATATTATGCAAAAATA--TTTTATCATAACTGACCG-AATTATGTTG-TAAAACATTTCGACTGCCAGCGGTCA-----------ACTC--------------------AACGGGTAAATGCGACAAATTAAGTA--------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490564:802496-802630 + ATG--------TGC-CC------T-GAAGC-CAGGCTTAAAAT-GCTG------A--CCAAATATTATTCAAAAATA--TTTTTCCATAACTGCCAA-AATTTTGTTG-CTAAACATTTCAACAGCAAGCGGTCA-----------TATC--------------------AACGGGAAAATTCGACTAATTAAGTA--------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000776514:206518-206649 + AAA--------CTGCCC------T-GAAGC-TGGGCTTAAAAT-GCTGTATATGT--CGAAATATTATGCAAAAATA--TGTTACCACAGCAACCAA-AATTA-----------TATTTCAACAGCAAGTGGTCA-----------TATC--------------------AACGAGTTTATTCGACAAATTAAGTA--------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453807:1162815-1162963 + ATT--------TGC-CT------T-TAAGC-CCAGTTTAAAAT-C-TGTGTACTT--TCAAATATTATGGGAAAATA--GCTCACCACAACAGCCCG-AATTATGTTGCCAAAACATTTTAGTTGAAAGCGGTGGAAAATGTTCTAATT-----------------------CAGGTTAATACGGCAAATTTAGTA--------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302486:2609555-2609720 + AGT--------TTGGCC------C-GAAGCATCGACTTAAAAT-TCTGGCTATAACCACAAATATTATGCGAAAATA--TTCAACAATAATTTGCGA-AATTGTGTTG-TCAAACATGGAAGCAGCCAGCGGTCA-----------TATCACTGCACCGCCACCAAATAAAGTGGGTAAATCGAACAAATTAAGTAT-------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12943:1820131-1820238 + AAA--------AAG-CA------------------------------G---------ACAATCATTATTCAATGTCA--ATACATAATAGTTAAATT----TATTT-------------------------------------------------------------------------------------------------ATTTATTTATTATTAAAGATAG--AGAAGTTTACAAAACTAGACTAACTTAGTTGGTA---------------------------------------------------
droBip1 scf7180000396663:21654-21767 + GCAAAATGGATTAC-CCACAAAATATTAAT-TTAACTTAGATT-AATTTAT---------------TTATTTATTTA--TTTATTTA-----------------------------------------------------------------------------------------------------------------------------TTATTAAAGATAG--AGAAGTTTGCAAAACTAGACTAACTTAGTTGGTA---------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATT--------TTCCCC------CGAAAGC-CCAGCTTAAAAT-GCGA---------CATAATATTTTGCCTAAATA--TTTTTCCACAACCGACCG-AGTTTGGTTG-CAAAATATTTTAGCAGAAAGCGGTCA-----------ATTC--------------------AATGGGTAAATGCGACAAATTAAGTATTTATTTATTTATTTATTATGATAGATAG--AATAGTTTACAAAACTAGACTAACTTAGATAGTAGGAGCTAGATTGTTTCGGAGGTGAGGACGGATGAATATGGGGGCAGTATGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGCAG.....25314.00420000000622000122000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATGAA................25913.1111800011102052713270140000
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGCAGTA...27210.5021000000070100031000
.....................................................................................................................................................................................................................................TAGTTTACAAAACTAGACTAACTTAGA........................................................272010.35207000000742810500000000
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGCAGT....2639.6729000100071140060000
...................................................................................................................................................................................................................................................................................TCGGAGGTGAGGACGGATGAATATGGG..........2739.0027000100531160010000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATGAATA..............2797.56680005001632836070000
..................................................................................................................................................................................................................................................................................................GATGAATATGGGGGCAGTAT..2027.0014000014000000000000
...........................................................................................................................................................................................................................................................................................GAGGACGGATGAATATGGGGGCAGTA...2626.501300000028030000000
..................................................................................................................................................................................................................................................................................TTCGGAGGTGAGGACGGATGAATA..............2494.44400000110611273000000
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGCA......2434.331300000006120031000
................................................................................................................................................................................................................................................................................................CGGATGAATATGGGGGCAGTA...2124.00800007000000010000
...............................................................................................................................................................................................................................................................................................ACGGATGAATATGGGGGCAGTATGC2523.50700000005110000000
..............................................................................................................................................................................................................................................................................................GACGGATGAATATGGGGGCAGTATGC2623.00600000005000010000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGA....................21113.0033002014001626020000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATG..................2392.4422000000101080120000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATGA.................2492.3321000011000005050000
...........................................................................................................................................................................................................................................................................................GAGGACGGATGAATATGGGGGCAGT....2532.33700000003030010000
..............................................................................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGGATGAA................2692.222000020040248000000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATGAAT...............2692.111900000001746010000
..................................................................................................................................................................................................................................................................................TTCGGAGGTGAGGACGGATGAATATGGG..........2832.00600010021200000000
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGG........2232.00600000013020000000
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGC.......2331.67500000012010010000
.......................................................................................................................................................................................................................TGATAGATAG--AATAGTTTACAAAACT.....................................................................26201.5531000000103270000000
..................................................................................................................................................................................................................................................................................TTCGGAGGTGAGGACGGATGAATAT.............2581.501200000040204020000
.............................................................................................................................................................................................................................................................................ATTGTTTCGGAGGTGAGGAC.......................20121.3316010015000000000000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATGAAA...............2691.331200100000252011000
..................................................................................................................................................................................................................................................................................................GATGAATATGGGGGCAGT....1831.33400000000004000000
............................................................................................................................................................................................................................................................................GATTGTTTCGGAGGTGAGGAC.......................21121.2515000015000000000000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGAT...................22101.201200000010007040000
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAATATGGGG.........2131.00301000001010000000
........................................................................................................................................................................................................................................................................................GGTGAGGACGGATGAATATGGGGGCAG.....2731.00300000010020000000
..................................................................................................................................................................................................................................................................................TTCGGAGGTGAGGACGGATGAATATGG...........2781.00800010011220010000
............................................................................................................................................................................................................................................................................................AGGACGGATGAATATGGGGGCAGTAA..2621.00200000000000002000
...................................................................................................................................................................................................................................................................................TCGGAGGTGAGGACGGATGAATATGGGG.........2831.00300010010100000000
..................................................................................................................................................................................................................................................................................................GATGAATATGGGGGCAGTATGC2221.00200000000002000000
............................................................................................................................................................................................................................................................................GATTGTTTCGGAGGTGAGGACGGA....................24100.90900000021311010000
..............................................................................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGGATGA.................2590.89800200010104000000
......................................................................................................................................................................................................TATTTATTTATTTATTATGATAGATAG--A....................................................................................28200.8517000000501200000000
..............................................................................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGGA....................22110.82900000012312000000
..............................................................................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGGATG..................2490.78700000010004020000
...................................................................................................................................................................................................................................................................................TCGGAGGTGAGGACGGATGAATATGG...........2680.75600000010020030000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGG.........................16140.7110000000000010000000
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAAT...............15100.70700000006100000000
.............................................................................................................................................................................................................................................................................................GGACGGATGAATATGGGGGCAG.....2230.67200000002000000000
............................................................................................................................................................................................................................................................................................AGGACGGATGAATATGGGGGC.......2130.67201000000001000000
........................................................................................................................................................................................................................................................................................GGTGAGGACGGATGAATATGGGGGC.......2530.67200000001010000000
.........................................................................................................................................................................................................................................................................................GTGAGGACGGATGAATATGGG..........2130.67200000010001000000
...........................................................................................................................................................................................................................................................................................GAGGACGGATGAATATGGGGGCAG.....2430.67200000001000010000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGG.....................20110.64700000020005000000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATGAATAT.............2880.63500000020201000000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACG......................19130.62800000000008000000
..............................................................................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGGAT...................23100.60600000000213000000
......................................................................................................................................................................................................TATTTATTTATTTATTATGATAGA..........................................................................................24200.551100000001730000000
..................................................................................................................................................................................................................................................................................................GATGAATATGGGGGCAGTATG.2120.50100000000001000000
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGCAGTAC..2820.50100000001000000000
................................................................................................................................................................................................................................................................................................CGGATGAATATGGGGGCAGTATGC2420.50100000010000000000
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGCAA.....2540.50200000000000011000
................................................................................................................................................................................................................................................................................................CGGATGAATATGGGGGCAGTATG.2320.50100000000010000000
.............................................................................................................................................................................................................................................................................................GGACGGATGAATATGGGGGCAGTATGC2720.50100000000000010000
....................................................................................................................................................................................................................................................................................................TGAATATGGGGGCAGTATG.1920.50100000000001000000
......................................................................................................................................................................................................................................................................................................AATATGGGGGCAGTATGC1820.50100000000001000000
...................................................................................................................................................................................................................................................................................TCGGAGGTGAGGACGGATGAATAT.............2480.38300000020000010000
..................................................................................................................................................................................................................................................................................TTCGGAGGTGAGGACGGATGAATATG............2680.38300000011010000000
..............................................................................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGG.....................21110.36400000000013000000
........................................................................................................................................................................................................................................TTTACAAAACTAGACTAACTTAGA........................................................24200.35700000040300000000
..................................................................................................................................................................................................................................................................................TTCGGAGGTGAGGACGGATGAAT...............2390.33300000010101000000
........................................................................................................................................................................................................................................................................................GGTGAGGACGGATGAATATGGG..........2230.33100000000010000000
..........................................................................................................................................................................................................................................................................TAGATTGTTTCGGAGGC.............................1730.33100000000001000000
............................................................................................................................................................................................................................................................................................AGGACGGATGAATATGGGG.........1930.33100000000001000000
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGCAGTT...2730.33100000000100000000
...........................................................................................................................................................................................................................................................................................GAGGACGGATGAATATGGGGGC.......2230.33100000000010000000
...............................................................................................................................................................................................................................................................................................ACGGATGAATATGGGGGCAGTT...2230.33100000000000001000
.............................................................................................................................................................................................................................................................................................GGACGGATGAATATGGGGG........1930.33100000000000001000
............................................................................................................................................................................................................................................................................................AGGACGGATGAATATGGGGGCAGTATT.2730.33100000010000000000
..............................................................................................................................................................................................................................................................................................GACGGATGAATATGGGGGCAG.....2130.33100000000000001000
...................................................................................................................................................................................................................................................................................................ATGAATATGGGGGCAGT....1730.33100000000001000000
........................................................................................................................................................................................................................................................................................GGTGAGGACGGATGAATATGGGGG........2430.33100000000010000000
..................................................................................................................................................................................................................................................................................................GATGAATATGGGGGCA......1630.33100000000001000000
.....................................................................................................................................................................................................................................................................................................GAATATGGGGGCAGT....1530.33100000000001000000
...............................................................................................................................................................................................................................................................................................ACGGATGAATATGGGGGCAG.....2030.33100000000000001000
.........................................................................................................................................................................................................................................................................................GTGAGGACGGATGAATATGGGGGCAG.....2630.33100000000010000000
...................................................................................................................................................................................................................................................................................TCGGAGGTGAGGACGGATGAATATGGGGT........2930.33100000010000000000
................................................................................................................................................................................................................................................................................................CGGATGAATATGGGG.........1530.33100000000010000000
................................................................................................................................................................................................................................................................................................CGGATGAATATGGGGGCAGTTA..2230.33100000000000001000
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAATATGGG..........2030.33100000001000000000
...................................................................................................................................................................................................................................................................................TCGGAGGTGAGGACGGATGAATA..............2390.33300000000010020000
....................................................................................................................................................................................................................................................................................................TGAATATGGGGGCAGT....1630.33100000000001000000
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGC........2230.33100000001000000000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGAC.......................18130.31400000001003000000
.....................................................................................................................................................................................................................................TAGTTTACAAAACTAGACTAACTTAGAA.......................................................28200.30600000001320000000
..............................................................................................................................................................................................................................................................................TTGTTTCGGAGGTGAGG.........................17140.29400000000004000000
.......................................................................................................................................................................................................................................................................................AGGTGAGGACGGATGAATATGGGGGA.......2640.25100000000000010000
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAATATG............1880.25200000000011000000
.....................................................................................................................................................................................................................................TAGTTTACAAAACTAGA..................................................................17200.25500000000320000000
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGCA.......2340.25100000000000010000
........................................................................................................................................................................................................................................................................................GGTGAGGACGGATGAATATGGGGCAG......2640.25100000001000000000
........................................................................................................................................................................................................................................................................................GGTGAGGACGGATGAATATGG...........2180.25200000000002000000
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGCAG......2440.25100000000010000000
...................................................................................................................................................................................................................................................................................TCGGAGGTGAGGACGGATGAATATG............2580.25200000000100010000
.................................................................................................................................................................................................................................................................................TTTCGGAGGTGAGGACGGATG..................2190.22200000010001000000
..................................................................................................................................................................................................................................................................................TTCGGAGGTGAGGACGGATGAA................2290.22200000000101000000
.........................................................................................................................................................................................................................................................................................GTGAGGACGGATGAATA..............1790.22200000000002000000
..............................................................................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGGATGAAA...............2790.22200000010100000000
..............................................................................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGGATGAATA..............2890.22200000000200000000
........................................................................................................................................................................................................................................................................................GGTGAGGACGGATGAATA..............1890.22200000000002000000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGA........................17140.21300000000003000000
..............................................................................................................................................................................................................TATTTATTATGATAGATAG--AATAGTT..............................................................................26200.20400000001111000000
........................................................................................................................................................................................................................................................................................GGTGAGGACGGATGAA................16100.20200000000002000000
..........................................................................................................................................................................................................TATTTATTTATTATGATAGATAG--A....................................................................................24200.20400000000400000000
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGCAT.....2550.20100000000000010000
.........................................................................................................................................................................................................................................TTACAAAACTAGACTAACTTAGA........................................................23200.20400000020200000000
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAATATGGGGGCAAA....2660.17100000000100000000
.....................................................................................................................................................................................................TTATTTATTTATTTATTATGATAGA..........................................................................................25200.15300000010020000000
..................................................................................................................................................................................................................TATTATGATAGATAG--AATAGTTTACAAA........................................................................28200.15300000020100000000
..........................................................................................................................................................................................................................................TACAAAACTAGACTAACTTAGA........................................................22200.15300000002100000000
.......................................................................................................................................................................................................................TGATAGATAG--AATAGTTTACAAAA.......................................................................24200.15300000001020000000
.....................................................................................................................................................................................................................TATGATAGATAG--AATAGTTTACAAAA.......................................................................26200.15300000000210000000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAG..........................15140.14200000000002000000
..............................................................................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGA........................18140.14200000000002000000
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAATATA............1880.13100000001000000000
........................................................................................................................................................................................................................................................................................GGTGAGGACGGATGAATATG............2080.13100000000001000000
.....................................................................................................................................................................................................................................................................................GGAGGTGAGGACGGATGAATATGG...........2480.13100000000001000000
.....................................................................................................................................................................................................................................................................................GGAGGTGAGGACGGATGAATATG............2380.13100000000000010000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATGGT................2590.11100000000001000000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATGAC................2590.11100000000010000000
.....................................................................................................................................................................................................................................................................................GGAGGTGAGGACGGATGAATA..............2190.11100000000001000000
..................................................................................................................................................................................................................................................................................TTCGGAGGTGAGGACGGATG..................2090.11100000000001000000
......................................................................................................................................................................................................................................................................................GAGGTGAGGACGGATGAATA..............2090.11100000000001000000
................................................................................................................................................................................................................................................................................GTTTCGGAGGTGAGGACGGATGAA................2490.11100010000000000000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGATGAAC...............2690.11100000000010000000
..........................................................................................................................................................................................................................................................................................TGAGGACGGATGAATAAA............1890.11100000001000000000
...........................................................................................................................................................................................................................................................................................GAGGACGGATGAATA..............1590.11100000001000000000
................................................................................................................................................................................................................................................................................GTTTCGGAGGTGAGGACGGATGAATA..............2690.11100010000000000000
..................................................................................................................................................................................................................................................................................TTCGGAGGTGAGGACGGATGA.................2190.11100000000100000000
.....................................................................................................................................................................................................TTATTTATTTATTTATTATGATAGATAG--A....................................................................................29200.10200000000200000000
.............................................................................................................................................................................................................................................................................ATTGTTTCGGAGGTGAGGACGGA....................23100.10100000000100000000
..................................................................................................................................................................................................................................................................................TTCGGAGGTGAGGACGGAT...................19100.10100000000000010000
..............................................................................................................................................................................................................TATTTATTATGATAGATAG--AATAGT...............................................................................25200.10200000000200000000
.......................................................................................................................................................................................................................TGATAGATAG--AATAGTTTACAAAAC......................................................................25200.10200000001010000000
.......................................................................................................................................................................................................................................................................................AGGTGAGGACGGATGAA................17100.10100000000001000000
.....................................................................................................................................................................................................................................TAGTTTACAAAACTAGACT................................................................19200.10200000000002000000
.............................................................................................................................................................................................................TTATTTATTATGATAGATAG--AATAGTT..............................................................................27200.10200000000020000000
..................................................................................................................................................................................................................TATTATGATAGATAG--AATAGTTTACA..........................................................................26200.10200000011000000000
..................................................................................................................................................................................................................................................................................TTCGGAGGTGAGGACGGA....................18110.09100000010000000000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGGAAC..................23110.09100000000001000000
..............................................................................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACGGAA...................23110.09100000000001000000
.....................................................................................................................................................................................................................................................................................GGAGGTGAGGACGGAT...................16110.09100000000001000000
.............................................................................................................................................................................................................................................................................ATTGTTTCGGAGGTGAGGACG......................21120.08100000010000000000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACGC.....................20130.08100000010000000000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACA......................19130.08100000000001000000
..............................................................................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACG......................20130.08100000000001000000
..................................................................................................................................................................................................................................................................................TTCGGAGGTGAGGAC.......................15130.08100000000001000000
............................................................................................................................................................................................................................................................................GATTGTTTCGGAGGTG............................16130.08100000000001000000
..............................................................................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGACT......................20130.08100000000100000000
..............................................................................................................................................................................................................................................................................TTGTTTCGGAGGTGAGGAC.......................19130.08100000000001000000
...............................................................................................................................................................................................................................................................................TGTTTCGGAGGTGAGGACT......................19130.08100000010000000000
..............................................................................................................................................................................................................................................................................TTGTTTCGGAGGTGAG..........................16140.07100000000001000000
.....................................................................................................................................................................................................................TATGATAGATAG--AATAGTTTACAAAAC......................................................................27200.05100000000000010000
..........................................................................................................................................................................................................TATTTATTTATTATGATAGAT.........................................................................................21200.05100000000001000000
....................................................................................................................................................................................................................TTATGATAGATAG--AATAGTTTACAA.........................................................................25200.05100000000000010000
......................................................................................................................................................................................................TATTTATTTATTTATTATGATAGAT.........................................................................................25200.05100000000100000000
..................................................................................................................................................................................................................TATTATGATAGATAG--A....................................................................................16200.05100000000001000000
..........................................................................................................................................................................................................................................TACAAAACTAGACTAACT............................................................18200.05100000010000000000
.........................................................................................................................................................................................................TTATTTATTTATTATGATAGATAG--A....................................................................................25200.05100000000001000000
.......................................................................................................................................................................................................................TGATAGATAG--AATAGTTTACAAAACA.....................................................................26200.05100000001000000000
.....................................................................................................................................................................................................................................TAGTTTACAAAACTAGACTAACTT...........................................................24200.05100000000010000000
.....................................................................................................................................................................................................................................TAGTTTACAAAACTAGACTAACT............................................................23200.05100000000100000000
.....................................................................................................................................................................................................................TATGATAGATAG--AATAGTTTAC...........................................................................22200.05100000010000000000
.................................................................................................................................................................................................................TTATTATGATAGATAG--AATAGTTTACAA.........................................................................28200.05100000010000000000
................................................................................................................................................................................................................TTTATTATGATAGATAG--AATAGTTT.............................................................................25200.05100000000010000000
..................................................................................................................................................................................................................TATTATGATAGATAG--AATAGTTTACAAAA.......................................................................29200.05100000001000000000
......................................................................................................................................................................................................................................AGTTTACAAAACTAGACTAACTTAGAT.......................................................27200.05100010000000000000
.......................................................................................................................................................................................................................TGATAGATAG--AATAGT...............................................................................16200.05100000000001000000
..........................................................................................................................................................................................................................................TACAAAACTAGACTAACTTAGAT.......................................................23200.05100000000100000000
..................................................................................................................................................................................................................TATTATGATAGATAG--AATAGTTTAC...........................................................................25200.05100000000010000000
.....................................................................................................................................................................................................................................TAGTTTACAAAACTAGACTAACTTAG.........................................................26200.05100010000000000000
........................................................................................................................................................................................................................................TTTACAAAACTAGACTAACT............................................................20200.05100000000001000000
.....................................................................................................................................................................................................................................TAGTTTACAAAACTAGACTAACTTAGAT.......................................................28200.05100000000010000000
.........................................................................................................................................................................................................................ATAGATAG--AATAGTTTACAAAACTAGA..................................................................27200.05100000001000000000
.................................................................................................................................................................................................................TTATTATGATAGATAG--A....................................................................................17200.05100000000001000000
......................................................................................................................................................................................................................................AGTTTACAAAACTAGACTAACTTAGA........................................................26200.05100000000010000000
droSec2
ATT--------TTCCCC------C-AAAGC-CCAGCTTAAAAT-GCGA---------CATAATATTTTGCCTATATA--TTTTTCCACAACCGACCG-AGTTTGGTTG-CAAAATATTTTAGCAGAAAGCGGTCA-----------ATTT--------------------AATGGGTAAATGCGACAAATTAAGTAT-------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
ATT--------TTTCCC------CCAAAGC-CCAGCTTAAAAT-GCGA---------CATAATATTTTGCCTAAATA--TTTTTCCACAACCGACCG-AGTTTGGTTG-CAAAATATTTTAGCAGAAAGCGGTCA-----------ATTC--------------------AATGGGTAAATGCGACAAATTAAGTAT-------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
No Reads
droEre2
ATT--------TTC-CC--------AAAGG-CCAGCTTAAAAT-GCGG---------CAAAATATTTTGCCAAAACACATTTTTCCACAACCGACCA-AGTTAGGTTTGCAAAATATTTTAGCAGAAAGCGGCCA-----------GTTC--------------------AACGGGTAAATGCGACAAATTAAGTAT-------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
ATT--------TTC-CC--------AAAGG-CCAGCTTAAAAT-GCGG---------CAAAATATTTTGCCAAAATA--TTTTTCCACTGCCGGCCG-TGTTCGGTTG-CAAAATATTTTAGCAGAAAGCGGCCA--AT--TGCCAATTC--------------------AACGGGTAAATGCGACAAATTAAGTATA-----AAGCACGTGCGGCAAGCGATTGAATGATGTTTTCAACGCGAGATTAACACA----------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
ATT--------TGC-CC------T-TAAGC-TCAGCTTAAACT-ACTATGTCTGA--CCAAATATTATGCCAAAATA--TTCTATCATAGCTGACCG-AATTCAATGG-CAAAAC----------------------------------------------------------AAGGCAATGCCACAAATTAAGTA--------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ATT--------TGC-CC------T-AAAGC-CAGGCTTAAAAACATTGTATACAG--GCAAAGAATATGCAATAATAT-TTATTCCATAACTGACCGGAATTATGTTG-TAAAACATTTCGACAGCCGGTGGTCG-----------TATC--------------------AACGAGTAAATGCAACAAATTAGGGAT-------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATT--------TGC-CTGTAGGGCAAATGC-CCGGCTTAAAAC-ACTGAATTTGA--GCCAATATTATGCAAAAATA--TTTTATCATAACTGACCG-AATTATGTTG-TAAAACATTTCGACTGCCAGCGGTCA-----------ACTC--------------------AACGGGTAAATGCGACAAATTAAGTA--------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ATG--------TGC-CC------T-GAAGC-CAGGCTTAAAAT-GCTG------A--CCAAATATTATTCAAAAATA--TTTTTCCATAACTGCCAA-AATTTTGTTG-CTAAACATTTCAACAGCAAGCGGTCA-----------TATC--------------------AACGGGAAAATTCGACTAATTAAGTA--------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAA--------CTGCCC------T-GAAGC-TGGGCTTAAAAT-GCTGTATATGT--CGAAATATTATGCAAAAATA--TGTTACCACAGCAACCAA-AATTA-----------TATTTCAACAGCAAGTGGTCA-----------TATC--------------------AACGAGTTTATTCGACAAATTAAGTA--------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
ATT--------TGC-CT------T-TAAGC-CCAGTTTAAAAT-C-TGTGTACTT--TCAAATATTATGGGAAAATA--GCTCACCACAACAGCCCG-AATTATGTTGCCAAAACATTTTAGTTGAAAGCGGTGGAAAATGTTCTAATT-----------------------CAGGTTAATACGGCAAATTTAGTA--------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AGT--------TTGGCC------C-GAAGCATCGACTTAAAAT-TCTGGCTATAACCACAAATATTATGCGAAAATA--TTCAACAATAATTTGCGA-AATTGTGTTG-TCAAACATGGAAGCAGCCAGCGGTCA-----------TATCACTGCACCGCCACCAAATAAAGTGGGTAAATCGAACAAATTAAGTAT-------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
AAA--------AAG-CA------------------------------G---------ACAATCATTATTCAATGTCA--ATACATAATAGTTAAATT----TATTT-------------------------------------------------------------------------------------------------ATTTATTTATTATTAAAGATAG--AGAAGTTTACAAAACTAGACTAACTTAGTTGGTA---------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................TACAAAACTAGACTAACTTAGTTGGT....................................................2690.898142010
..........................................................................................................................................................................................................................................TACAAAACTAGACTAACTTAGTTGG.....................................................2590.333210000
........................................................................................................................................................................................................................TAAAGATAG--AGAAGTTTACAAAACTAGA..................................................................2890.111010000
.........................................................................................................................................................................................................................AAAGATAG--AGAAGTTTACAAAACTAGAC.................................................................28100.101010000
droBip1
GCAAAATGGATTAC-CCACAAAATATTAAT-TTAACTTAGATT-AATTTAT---------------TTATTTATTTA--TTTATTTA-----------------------------------------------------------------------------------------------------------------------------TTATTAAAGATAG--AGAAGTTTGCAAAACTAGACTAACTTAGTTGGTA---------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/19/2015 at 02:17 PM