ID:dsi_23705 |
Coordinate:2r:5617271-5617333 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [2r_5617169_5617270_-]; CDS [2r_5617169_5617270_-]; CDS [2r_5617334_5618056_-]; exon [2r_5617334_5618056_-]; intron [2r_5617271_5617333_-]
No Repeatable elements found
| ##################################################---------------------------------------------------------------################################################## CTTGGACATTAAATCGGAAAAGACAAAACCCAATGGAAATGTGCTGAGAAGTAAGTCGGCTGATGTTTAGATAAATGTAGAAAGATTACCAAAGTTATGAATGCTATTTACAGGGGAAAGTTTACGGACTGTCATGTTCAAGCGGCAGAATATAGCCGAAAGC **************************************************((((((.(((....(((((.......((((.....))))........))))))))))))))..************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
SRR902009 testis |
M053 female body |
M024 male body |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................TAAAAGTAGAAAGACTACCAAAGCT................................................................... | 25 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ........................................................................................................TATTTACAGGGGAAAGTTTACGGAC.................................. | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............................................TAAGAAGTGAGTCGGCTGAAGT................................................................................................. | 22 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 |
| ....................................AAATGTACTGAGAGGTTAG............................................................................................................ | 19 | 3 | 18 | 0.06 | 1 | 0 | 0 | 1 | 0 | 0 |
| ............ATCGGGAAAGGCAAAACCT.................................................................................................................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 |
| ...............................................................................GCAAGATTCCCAAAGTT................................................................... | 17 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
|
GAACCTGTAATTTAGCCTTTTCTGTTTTGGGTTACCTTTACACGACTCTTCATTCAGCCGACTACAAATCTATTTACATCTTTCTAATGGTTTCAATACTTACGATAAATGTCCCCTTTCAAATGCCTGACAGTACAAGTTCGCCGTCTTATATCGGCTTTCG
**************************************************((((((.(((....(((((.......((((.....))))........))))))))))))))..************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM343915 embryo |
SRR553487 NRT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................TTACTTCGTTCTATTGGTTTCA.................................................................... | 22 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........................................................................GTACGTCGTTCTAATGGTTTCA.................................................................... | 22 | 3 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..........................TAGGGTTACCTTTAAACGGCT.................................................................................................................... | 21 | 3 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 |
| ..........................................................................................................GAATGTCCCGTTGCAAATG...................................... | 19 | 3 | 9 | 0.11 | 1 | 0 | 0 | 1 | 0 | 0 |
| ..........................................................................................TTTCAATACCTACGATA........................................................ | 17 | 1 | 10 | 0.10 | 1 | 0 | 0 | 0 | 1 | 0 |
| ..................................................................................TCTAATGGTGTCAAT.................................................................. | 15 | 1 | 10 | 0.10 | 1 | 0 | 0 | 1 | 0 | 0 |
| ..........................................CGAGTCTTCATTCAACC........................................................................................................ | 17 | 2 | 12 | 0.08 | 1 | 0 | 0 | 0 | 1 | 0 |
| ....................................................................................TAATGGTGTCAATAC................................................................ | 15 | 1 | 14 | 0.07 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...................................................................................TTAATGGTTTCAATA................................................................. | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
Generated: 04/23/2015 at 07:41 PM