ID:dsi_23666 |
Coordinate:3l:11456160-11456309 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
five_prime_UTR [3l_11455943_11456159_-]; exon [3l_11455672_11456159_-]; intron [3l_11456160_11462014_-]
No Repeatable elements found
| --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## AAAATATAGTTTTGATATATATGGCAGCATATTTCCTCGGCTTCTTTAAATTAAAGTGTCAAAGCAGTGGAAAATTAATTTCCCCAACCATTATCCAATATCATTCGTTGGCCGCAAGCTGTTGCCAATTGCTTTGGCAATTTTGTCAGACACCAAATAGCACATTTTTTTTCTTACCAAATGCACTTTTTTGCTTGCAGAGTGAAATTGGAACGCTGGCCGAAGCCCGTTAATCTCCGATGAGGCGACA **************************************************......(((((((((((((((((.....)))))(((((..................)))))..((((....))))..))))))))))))...((((.((.((..(((.((..(((((...........)))))..)).))))))).))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553488 RT_0-2 hours eggs |
M053 female body |
SRR553487 NRT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................................................................................................TGGCCGAAGCCCGTTAATCTCCGATGA....... | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................................................TGCTATGGTAATTTTGTCACA.................................................................................................... | 21 | 3 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 | 0 |
| ................................................GATTAGAGTGTCCAAGCAGT...................................................................................................................................................................................... | 20 | 3 | 7 | 0.14 | 1 | 0 | 0 | 1 | 0 | 0 |
| ...............................................AAATTAGAGTCTCAAAG.......................................................................................................................................................................................... | 17 | 2 | 20 | 0.10 | 2 | 0 | 0 | 0 | 2 | 0 |
| .............................................TTGAGTTAAAGTGTCAAA........................................................................................................................................................................................... | 18 | 2 | 13 | 0.08 | 1 | 0 | 0 | 0 | 0 | 1 |
|
TTTTATATCAAAACTATATATACCGTCGTATAAAGGAGCCGAAGAAATTTAATTTCACAGTTTCGTCACCTTTTAATTAAAGGGGTTGGTAATAGGTTATAGTAAGCAACCGGCGTTCGACAACGGTTAACGAAACCGTTAAAACAGTCTGTGGTTTATCGTGTAAAAAAAAGAATGGTTTACGTGAAAAAACGAACGTCTCACTTTAACCTTGCGACCGGCTTCGGGCAATTAGAGGCTACTCCGCTGT
**************************************************......(((((((((((((((((.....)))))(((((..................)))))..((((....))))..))))))))))))...((((.((.((..(((.((..(((((...........)))))..)).))))))).))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553488 RT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................................................................GTGAAAGCACAAACGTCTCAC.............................................. | 21 | 3 | 3 | 1.33 | 4 | 1 | 2 | 1 | 0 | 0 |
| ........................................................................................................................................................................................TGAAAGCACAAACGTCTCAC.............................................. | 20 | 3 | 7 | 0.43 | 3 | 1 | 0 | 2 | 0 | 0 |
| ......................................................TCAAAGTTTCGTCTCCTT.................................................................................................................................................................................. | 18 | 2 | 7 | 0.14 | 1 | 0 | 0 | 0 | 1 | 0 |
| ................................................................................................................................................................................GGTGTACGTGAATAAGCGAAC..................................................... | 21 | 3 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................................................................................................................................................................................CTGGGCAATTAGAAGCTAC........ | 19 | 3 | 8 | 0.13 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..........................CGTAAAAAAGAGCCGAAG.............................................................................................................................................................................................................. | 18 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
| ...........................................................................................................................................................................AAAATGGTTTGCGTAAAAAAA.......................................................... | 21 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 |
Generated: 04/24/2015 at 08:23 AM