ID:

dsi_23620

 Coordinate:

3r:1378251-1378425 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-25.1 -25.0 -24.9 -24.8

Flybase annnotation

exon [3r_1378426_1379556_-]; CDS [3r_1378426_1379556_-]; CDS [3r_1378032_1378250_-]; exon [3r_1377908_1378250_-]; intron [3r_1378251_1378425_-]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACAGTCACCAGTCGCAGTTGGATCACAAGTTTTCATTGTTGCAGATGTGGGTGAGTCGCAACATTGTCTCTATAAAGATAGGAAGTGTTTAAATATGGTAAAAACAGAAAGAAACATCAAGAGCTTAGGGTCGGAATTAATTATCTGAATATATTCTGTTCAGAGTAGGCTATGAAAAAGATTCGCCATATCGAAATTAAACTAATAAAACTTTATTAATTGCAGGACGACTTCGACGAATACGACGACAAAGACGAGGAGATCTATTACATTCC
**************************************************.............(((......(((((.........(((((((((((((.......(((.......(((..((((((................((((((((.....)))))))).)))))).)))......)))))))))).....))))))........))))).......)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
...........................AGTTTTCATTGTTGCAGATGTGGGA............................................................................................................................................................................................................................... 25 1 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0
.....CACCAGTCGCAGTTGGATCAC......................................................................................................................................................................................................................................................... 21 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................ATTCTGTTCAGAGTAGGCTAT...................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.........................CAAGTTTTCATTGTTGCAGAT..................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....CACCAGTCGCAGTTGGATCA.......................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....CACCAGTCGCAGTTGGAT............................................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................CTTTATTAATTGCAGGAC............................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CTATGAAAAAGATTCGCCATA..................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................AACTTTATTAATTGGAGG................................................. 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................TACGACGACAAAGACGAGGAGATCTAT........ 27 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................GGGACGACTTCGACGAATAC................................ 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................TTTCATTGTTGCAGATGTG.................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..................TGGATCACAAGTTTTCATTGTTGCAGA...................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
......................................................................................................................................................................................................................................CTTCGACGAATACGACGAC.......................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................CGACGAATACGACGACAAAGACGAGGA............... 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................ATTGTGTTCAGAGTAGGCTAT...................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TTTATTAATTGCAGGACGAC............................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................TTCATTGTTGCAGATGGG.................................................................................................................................................................................................................................. 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........AGTCGCAGTTGGATCACAAG...................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................GACGAATACGACGACAAAGACGAGGA............... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................GTAGGCTATGAAAAGGATTCGC......................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...........................AGTTTTCATTGTTGCA........................................................................................................................................................................................................................................ 16 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................CAGGACGACTTCGACGAATAC................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......ACCAGTCGCAGTTGGATCAC......................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................TGCGACGACAAAGACGAGGAGT............. 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....CACCAGTCGCAGTTGGATC........................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTGGGGTCGGAATTAATTATC.................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................GGGTGAGTCGTAACA.................................................................................................................................................................................................................... 15 1 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0
.................................CATTGTTGCAGATGTGGGAC.............................................................................................................................................................................................................................. 20 2 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................................TTCAACGGATTCGACGACAAA....................... 21 3 10 0.40 4 0 0 1 0 0 0 0 0 0 0 3
..AGTCACCAGTCGCAGT................................................................................................................................................................................................................................................................. 16 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.....................ATCACAAGTTTTCATTTCTG.......................................................................................................................................................................................................................................... 20 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CTTCAACGGATTCGACGACAAA....................... 22 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1
........................................GGAGATGTGGGTGAGT........................................................................................................................................................................................................................... 16 1 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................................................................................CTACGCCAAATACGACGAC.......................... 19 3 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0
...............................................................................................................................................................................................................................................ATACGACGACGTAGACCA.................. 18 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0
..........GTCGCAGTTGGATCAGT........................................................................................................................................................................................................................................................ 17 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

TGTCAGTGGTCAGCGTCAACCTAGTGTTCAAAAGTAACAACGTCTACACCCACTCAGCGTTGTAACAGAGATATTTCTATCCTTCACAAATTTATACCATTTTTGTCTTTCTTTGTAGTTCTCGAATCCCAGCCTTAATTAATAGACTTATATAAGACAAGTCTCATCCGATACTTTTTCTAAGCGGTATAGCTTTAATTTGATTATTTTGAAATAATTAACGTCCTGCTGAAGCTGCTTATGCTGCTGTTTCTGCTCCTCTAGATAATGTAAGG
**************************************************.............(((......(((((.........(((((((((((((.......(((.......(((..((((((................((((((((.....)))))))).)))))).)))......)))))))))).....))))))........))))).......)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 M023
head
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 M024
male body		 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
............................................................................................................TTCTTTGTAGTTCTCGAAT.................................................................................................................................................... 19 0 1 5.00 5 0 0 5 0 0 0 0 0 0 0
.....................................................CCAGCGTTGTAACAGAGATAT......................................................................................................................................................................................................... 21 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................CTGCTGTTGCTGCACCTCTGGAT......... 23 3 2 2.00 4 0 0 0 4 0 0 0 0 0 0
...................................................................................................................................................................................................................................................CTGCGGTTTCTGGTCCTATAG........... 21 3 4 1.25 5 5 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................TGCTGTTGCTGCACCTCTGGAT......... 22 3 4 1.25 5 0 0 0 5 0 0 0 0 0 0
TGTCAGTGGTCAGCGTCAACCT............................................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.........................................GTCTACACCCACTCAGCGTTGT.................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0
.........TCAGCGTCAACCTAGTGTTCA..................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........GTCAGCGTCAACCTAGTGTTC...................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
......TGGTCAGCGTCAACCTAGTGT........................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
....................................................CTCAGCGTTGTGACAGAGATA.......................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................TTATAAGATAAGTCTCATCAGAT....................................................................................................... 23 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0
.....................................................TCAGCGTTGTAACAGAGGTAT......................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................TACACCCACTCAGCGTTGTAA.................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................TCAGCGTTGTAACAGAGATA.......................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGAAATAATTAACGTCCTGCTGAAGCT....................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................AACCTAGTGTTCAAAAGTAAC............................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................TTTTCCTTGTAGTTCTCGAA..................................................................................................................................................... 20 2 3 0.67 2 0 0 0 0 2 0 0 0 0 0
...........................................................................................................TTTCCTTGTAGTTCTCGAAT.................................................................................................................................................... 20 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0
..TCAGTAGTCAGGGTCGACC.............................................................................................................................................................................................................................................................. 19 3 15 0.20 3 0 1 0 0 0 2 0 0 0 0
...................................................................................................................................................................................................................................................CTGCTGTTGCTGCACCTCTGGA.......... 22 3 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................GCTGCTTATGATACTGTGT....................... 19 3 15 0.13 2 1 0 0 1 0 0 0 0 0 0
......TGGTCAGCGTCAACA.............................................................................................................................................................................................................................................................. 15 1 14 0.07 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................CTGCTGTTGCTGCACCTCTGG........... 21 3 15 0.07 1 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................................................CTGCGGCTGTTTCTGCTCGTC.............. 21 3 15 0.07 1 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:1378201-1378475 - dsi_23620 ACAGTCACCAG---TCGCAGTTGGATCACAAGTTTTCATTGTTGCAGATGTGGGTGAGTCGCAA-CA------TTGTCTCTATAAAGATAGGAAG-------------------------------------------------TGTTTAAATATGGTAAAAA-----------------------------CAGAAAGAAA-----------------------------------------------------------------------------------------------------------------------CATCAAGAGCTTAGGGTCGGAATTAATTATCTGAATATATTCTGTTCAGAGTAGGCTATG------------------------------------------------------------AAAAAGAT------------------------------------------T--C--GCCATATCGAAAT------TAAACTAATAAAACTT-----------TATTAATTGCAGGACGACTTCGACGAATACGACGACAA------------AGA---CGAGGAGA---TCTATTACATTCC
droSec2 scaffold_6:1597144-1597418 - ACAGTCACCAG---TCGCAGTTGGATCACAAATTTTCATTGTTGCAGATGTGGGTGAGTCGCAA-CA------TTGTCTCTATAAAGATAGGAAG-------------------------------------------------TGTTTAAATATGGTAAAAA-----------------------------TAGAAAGAAA-----------------------------------------------------------------------------------------------------------------------CATCAAGAGCTTAAGGTCGGAATTAATTATTTGAAAATATTCTGTTCAGAGTAGGCTATG------------------------------------------------------------AAAAAGAT------------------------------------------T--C--GCCATATCGAAAT------TAAACTAATAAAACTT-----------TATTAATTGCAGGACGACTTCGACGAATACGACGACAA------------AGA---CGAGGAGA---TCTATTACATTCC
dm3 chr3R:1482244-1482570 - ACAGTCACCAG---TCGCAGTTGGATCACAAGTTTTCATTGTTGCAGATGTGGGTGAGTCGCAA-GA------TTGTCTCTATAAAAATAGGAAG-------------------------------------------------TGG-----------AAAAA-----------------------------TAGAAAAAGA----------------------------------------AAATTGTAAT--------TATTGT--------TTTTTAAACATAATCTAAGACTTGCGGCAAGCCCTGTCGACTCTTATCATCAAGAGCTTAGGGTCGGAATTAATTACCAGAAAATATTCTAGACAGAGTGGGCTATG------------------------------------------------------------CAAATGAT------------------------------------------T--T--GCCATATCGAAAT------TAAAGTAATAAAACTT-----------TATTAATTGCAGGACGACTTCGACGAATACGACGACAA------------AGA---CGAGGAGA---CATATTACATTCC
droEre2 scaffold_4770:1755076-1755232 - AACATCAAGAG---CATTGGGTCGAAATTAATTATTGAATTTCGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGGCTATTCA--------------------------------------------C-------------AAACATAT------------------------------------------T--C--GTCATATCAAAAT------GAAGCTAATATTACCT-----------AATTAATTGCAGGACGACTTCGACGAATACGACGACAA------------AGA---CGAGGAGA---TCTATTACATTCC
droYak3 3R:17446456-17446671 - ACAGTCATCAG---TCGCAGTTGGATCACAAGTTTTCATTGTTGCAGATGTGGGTGAGTCGCAA-TA------TTTTCACTTTAAAGATAGGAAA-------------------------------------------------TGGTTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAATAATATTTA--TATAGTTATTGTTAATGGA---------------------------------------------------------------------C--GCAATATCAAAAT------GAAACTAATATAACTT-----------AATTAATTTCAGGACGACTTCGACGAATACGACGACAA------------GGA---CGAGGAGA---TCTATTACATTCC
droEug1 scf7180000409766:450775-450856 - ATAATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACAAATCTTTA---------TTCCTATTACAGGACGACTTCGACGAATACGACGACAA------------AGA---CGAGGAGA---GCTATTACATTCC
droBia1 scf7180000302155:3278212-3278291 + TTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAAA-AATGTAAA---------TTTCTTTTGCAGGACGACTTCGACGAATACGACGACAA------------AGA---CGAGGAGA---GCTATTACATTCC
droTak1 scf7180000415754:292149-292234 + ATGGCCATCAG---TCGCAGTTGGATCACAAGTTTTCATTGTTGCAGATGTGGGTGAGTCTTG----GGAAGGA----------------------------------------------------------------GGATTATGTTTAAATATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G
droEle1 scf7180000491278:137476-137532 - A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGGACGACTTCGATGAATACGACGAAAA------------AGA---CGAGGAGA---GCTATTACATTCC
droRho1 scf7180000780094:42654-42746 + GGTTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAT-----T------TAAACTAACCAATTTTAA---------TTCCCATTGCAGGATGACTTCGACGAATACGACGACAA------------AGA---CAAGGAGA---GCTATTACATTCC
droFic1 scf7180000453850:888217-888295 - AAACTAATCAA---CCCAATCT------------G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTGCAGGACGACTTCGACGAATACGACGACAA------------AGA---CGAGGAGA---GCTATTACATTCC
droKik1 scf7180000301874:65548-65790 + ACGGCAATCAG---TCGCGATTTGAGCACAAGTTTTCGTTGCTGCAGATGTGGGTGAGTCAAG----CGAACGATGTTTTTATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCCCA-----------------------------------------------------------------------GAAAGCCATTCAGTGTTTAAAACCCAATATTCATATATATTTAC---------GATCAATGTAAATTTTGAGACTAAT------------------------------------------T--T--TCA-----------------------ACAT-------------TACTTTCGATTGTAGGACGACTTCGACGATTACGACGACAACGAGGAGGACGAGGATGAGGATGAGA---CCTATTACATTCC
droAna3 scaffold_13340:1422302-1422481 - ACGGTGACCAG---TCGCAGTTGGAACACAATTTTTCATTGTTGCAGATGTGGGTGAGTGTTG----GG-------------------------------------------------------CGCAACCAGG------AA------------------------------------------------------------------------------------------------------------GGATTTAAAAAG---TTCTATTATT----------------------------------------------------------------------------------------------------------------------------------TTATAATTG-----------------------------CTTA---------------------------------------------TTAATC-----------------------A----------TT---------TTATTCTTGCAGGACGACTTCGATGACTACGACGACAA------------AGA---GGACGAGA---GCTATTACATTCC
droBip1 scf7180000396712:2900276-2900467 + ACGGAGACCAG---TCGCAGTTGGAACACAATTTTTCATTGTTGCAGATGTGGGTGAGTACTT----GGAGGGA-----------------------------------------------------AAACAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACTTCTTTAGAATTTTGTCCTCATGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCGAATA------ATTGCTCATAATATCCGA---------TTACTCTTGCAGGACGACTTCAATGACTACGACGACAA------------AGA---GGACGAGA---GCTATTACATTCC
dp5 2:11217639-11217875 + ACTGCCACCAT---CCGCAGTTGGAGCACAAGTTTTCATTGTTGCAGATGTGGGTGAGTTCGT----TGACTGAT----CGTTGTTCGTTGGCACTGATGGCATCTGTCATCGCAAAGGATGGCCGAAAACTTAAGCAGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCTCTG------------------------------------------AACTCCATACAAATTTTTAACTCA---------------------------------------------TTTATC-----------------------TATTCG-------------TACTTTGTGTTGCAGGACGACTTTGACGACTAC---TATAA------------GGA---CGATGAAA---ACTATTACATTCC
droPer2 scaffold_0:9252662-9252897 - ACTGCCACCAT---CCGCAGTTTGAGCACAAGTTTTCATTGTTGCAGATGTGGGTGAGTTCGT----TGACTGAT----CGTTGATCGTTGGCACTGATGGCATCTGTCA-CACATAGGATGGCCGAAAACTGGAGCAGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCTCTG------------------------------------------AACTCTATACAAATTTTTAACTCA---------------------------------------------TTTATC-----------------------TATTCG-------------TACTTTGTGTTGCAGGACGACTTTGACGACTAC---GATAA------------GGA---CGATGAAA---ACTATTACATTCC
droWil2 scf2_1100000004921:3575603-3575969 + ACCGCCGTTCG---GCACAACTGGAACACAAGTTTTCATTGCTGCAGATGTGGGTGAGTTTTATC--TA--------------ACTGATATGAAG-------------------------------------------------TGTCCTA----GGTCAAAGTGCTTAATAAGGATATTCTGCGAGGCGATCAATTAAAAGCTTCAAATGCTTCAAATTTAACCGCTAAAGTAGGTCACGCAGATGCCTAG--------GAATGT--------TTTTTG-----------------------------GTAGACTCTTAT------------------------------------------------------------CT--------------------------------------------A-------------AAGCATATTTCTTATCACCAGACGAGTGGAACTATTATTAGCAATATTTCT--A--GCCCTTTTGACAATGAGAATAAA-TAACAAATTT-GATTTCT-TTTTCTAATTTCCAGGACGACTTTGACGAATACGAGA---A------AGACGAAGA---TGATGAGA---ACTGTTACATTCC
droVir3 scaffold_12855:3917122-3917182 + ATGGCCAACAG---ACGCAATTGGATCAAAAATTCTCATTGCTGCAGATGTGGGTACGTAGCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:8225234-8225398 + ATGGTCAGCAG---ACGCAATCGGACGATAAGTTCTCATTGCTGCAGATGTTGGTTAGTAGCCA-CG------ATCATGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGACTCCA--AGCTCT--------T-----------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------------------------------------------------------------------TATAATTCCCGATTTGCTTACATTCAATTCCAGGACTTTTTCGACGATGA---------------------GGA---CGATGAGAACTGCTGTTACATTCC
droGri2 scaffold_14906:6541024-6541203 + ACGGCCGCCAGCAGACGCAATTCGATCCGAATTTCTCATTGCTGCAGATGTGGGTGAGTTGAAA-T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACACAGATGAGATGATCAGA--TGCGGT--------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAAATA------TATAATAATACTGCCC-----------GCTTTCTTCCAGGACTATTTCGACGACTATGATCAGGA------------CGA---TGAGAACT---GTTGTTACATTCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACAGTCACCAG---TCGCAGTTGGATCACAAGTTTTCATTGTTGCAGATGTGGGTGAGTCGCAA-CA------TTGTCTCTATAAAGATAGGAAG-------------------------------------------------TGTTTAAATATGGTAAAAA-----------------------------CAGAAAGAAA-----------------------------------------------------------------------------------------------------------------------CATCAAGAGCTTAGGGTCGGAATTAATTATCTGAATATATTCTGTTCAGAGTAGGCTATG------------------------------------------------------------AAAAAGAT------------------------------------------T--C--GCCATATCGAAAT------TAAACTAATAAAACTT-----------TATTAATTGCAGGACGACTTCGACGAATACGACGACAA------------AGA---CGAGGAGA---TCTATTACATTCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................AGTTTTCATTGTTGCAGATGTGGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000002000000000
.....CACCAG---TCGCAGTTGGATCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00211000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................ATTCTGTTCAGAGTAGGCTAT...................................................................................................................................................................................................................................................2111.00100000000000001000
............................CAAGTTTTCATTGTTGCAGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.....CACCAG---TCGCAGTTGGATCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
.....CACCAG---TCGCAGTTGGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTT-----------TATTAATTGCAGGAC.................................................................1811.00110000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................CTATG------------------------------------------------------------AAAAAGAT------------------------------------------T--C--GCCATA........................................................................................................................2111.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACGACAA------------AGA---CGAGGAGA---TCTAT........2711.00100000000001000000
.................................TTTCATTGTTGCAGATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.....................TGGATCACAAGTTTTCATTGTTGCAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGACGAATACGACGAC............................................1911.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAATACGACGACAA------------AGA---CGAGGA..................2711.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----------TATTAATTGCAGGACGAC..............................................................2011.00110000000000000000
.........AG---TCGCAGTTGGATCACAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAATACGACGACAA------------AGA---CGAGGA..................2611.00100010000000000000
..............................AGTTTTCATTGTTGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACGACTTCGACGAATAC..................................................2111.00100000001000000000
......ACCAG---TCGCAGTTGGATCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
.....CACCAG---TCGCAGTTGGATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
....................................CATTGTTGCAGATGTGGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100100000000000000
..AGTCACCAG---TCGCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1630.33100000001000000000
..........G---TCGCAGTTGGATCAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
droSec2
ACAGTCACCAG---TCGCAGTTGGATCACAAATTTTCATTGTTGCAGATGTGGGTGAGTCGCAA-CA------TTGTCTCTATAAAGATAGGAAG-------------------------------------------------TGTTTAAATATGGTAAAAA-----------------------------TAGAAAGAAA-----------------------------------------------------------------------------------------------------------------------CATCAAGAGCTTAAGGTCGGAATTAATTATTTGAAAATATTCTGTTCAGAGTAGGCTATG------------------------------------------------------------AAAAAGAT------------------------------------------T--C--GCCATATCGAAAT------TAAACTAATAAAACTT-----------TATTAATTGCAGGACGACTTCGACGAATACGACGACAA------------AGA---CGAGGAGA---TCTATTACATTCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAATACGACGACAA------------AGA---CGAGGA..................2611.0010010
............................................CAGATGTGGGTGAGTCGCAA-CA------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
......................................TTGTTGCAGATGTGGGTGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..................AGTTGGATCACAAATTTTCATTGTTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGACGACAA------------AGA---CGAGGA..................2111.0010010
.......CCAG---TCGCAGTTGGATCACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAATACGACGACAA------------AGA---CGAG....................2411.0010100
dm3
ACAGTCACCAG---TCGCAGTTGGATCACAAGTTTTCATTGTTGCAGATGTGGGTGAGTCGCAA-GA------TTGTCTCTATAAAAATAGGAAG-------------------------------------------------TGG-----------AAAAA-----------------------------TAGAAAAAGA----------------------------------------AAATTGTAAT--------TATTGT--------TTTTTAAACATAATCTAAGACTTGCGGCAAGCCCTGTCGACTCTTATCATCAAGAGCTTAGGGTCGGAATTAATTACCAGAAAATATTCTAGACAGAGTGGGCTATG------------------------------------------------------------CAAATGAT------------------------------------------T--T--GCCATATCGAAAT------TAAAGTAATAAAACTT-----------TATTAATTGCAGGACGACTTCGACGAATACGACGACAA------------AGA---CGAGGAGA---CATATTACATTCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------AGA---CGAGGAGA---CATATTAC.....2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000402000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTTCGACGAATACGACGACAA------------AGA---........................2718.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTTCGACGAATACGACGACA...........................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ACAAGTTTTCATTGTTGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AG---TCGCAGTTGGATCACAAGTTTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGACAA------------AGA---CGAGGAGA---C............2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACGACAA------------AGA---CGAGGAGA---CA...........2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000200000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGACGAATACGACGACAA------------AGA---........................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAA------------AGA---CGAGGAGA---CATA.........2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000200000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACGACAA------------AGA---CGAGGAGA---CATAT........2712.0020000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CATTGTTGCAGATGTGGGTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTAATTGCAGGACGACTTC...........................................................2112.0020000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTTCGACGAATACGACGACAA------------AGA---CG......................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------AGA---CGAGGAGA---CATATTACATTCC2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
.....CACCAG---TCGCAGTTGGATCACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.........AG---TCGCAGTTGGATCACAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACGACAA------------AGA---CGAGGAGA---CA...........2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................................................................................................................................................................................................................................................................AGACTTGCGGCAAGCCCTGTC.......................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................ATG------------------------------------------------------------CAAATGAT------------------------------------------T--T--GCCATATCG.....................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACAGTCACCAG---TCGCAGTTGGATCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TCGCAGTTGGATCACAAGTTTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACGACGACAA------------AGA---CGAGGAGA---CA...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCACCAG---TCGCAGTTGGATCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATGAT------------------------------------------T--T--GCCATATCGAA...................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GTGAGTCGCAA-GA------TTGTCTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TTCATTGTTGCAGATGTGGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACTTCGACGAATACGA................................................1911.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................GCTTAGGGTCGGAATTAATT..................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
......................................TTGTTGCAGATGTGGGTGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................................................................................................................................................................................................AAATATTCTAGACAGAGTGGG.......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGAAAT------TAAAGTAATAAAACTT-----------T...............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................GGGCTATG------------------------------------------------------------CAAATGAT------------------------------------------T--T--GCC...........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............CGCAGTTGGATCACAAGTTTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGCAGTTGGATCACAAGTTTTCAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................ATTGTTGCAGATGTGGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TATCATCAAGAGCTTAGGGTC............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...................GTTGGATCACAAGTTTTCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAT------------------------------------------T--T--GCCATATCGAAAT------TAAAGT.....................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGACGAATACGACGACAA------------AGA---CGA.....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------------------------T--T--GCCATATCGAAAT------TAAAG......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.....................................................GTGAGTCGCAA-GA------TTGTCTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TCTAAGACTTGCGGCAAGCC............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CAG---TCGCAGTTGGATCACAAGTTTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGACGAATACGACGACAA------------AGA---CGA.....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AGTTTTCATTGTTGCAGATGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------AGA---CGAGGAGA---CATATT.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---CGAGGAGA---CATATTACA....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TCAAGAGCTTAGGGTCGGAAT.......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGGATCACAAGTTTTCATTGTTGCAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................GTGGGCTATG------------------------------------------------------------CAAATGAT------------------------------------------T--T--GC............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAA------------AGA---CGAGGAGA---CATA.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....................................................................................AAATAGGAAG-------------------------------------------------TGG-----------AAAAA-----------------------------TAGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAATACGACGACAA------------AGA---........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
............................CAAGTTTTCATTGTTGCAGATGTGGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................AAGAGCTTAGGGTCGGAATTA.....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...GTCACCAG---TCGCAGTTGGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAATACGACGACAA------------AGA---CGAGGAGA---.............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........G---TCGCAGTTGGATCACAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAATACGACGACAA------------AGA---CGAGG...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................GTGGGCTATG------------------------------------------------------------CAAATGAT------------------------------------------T--T--GCC...........................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CAGATGTGGGTGAGTCGCAA-G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.........................................TTGCAGATGTGGGTGAGTCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------AGA---CGAGGAGA---CATATTACA....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATACGACGACAA------------AGA---CGAG....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------TAAAGTAATAAAACTT-----------TATTA...........................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACGACAA------------AGA---CGAGGAGA---CAT..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................ATTCTAGACAGAGTGGGC......................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTTCGACGAATACGACGACAA------------..............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------TAAAGTAATAAAACTT-----------TA..............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................ACTTGCGGCAAGCCCTGTCGACTCT.................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TAAGACTTGCGGCAAGCCCTG.........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCGACGAATACGACGAC............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AACATAATCTAAGACTTGCGGC.................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCAGGACGACTTCGACG.......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TTAGGGTCGGAATTAATTACC...............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................TTATCATCAAGAGCTTAGGGT.............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTTCGACGAATACGACGA.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................ACAGAGTGGGCTATG------------------------------------------------------------CAAATG................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTTCGACGAATACGACGAC............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAATACGACGACAA------------AGA---CGA.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGACAA------------AGA---CGAGGAG.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................AAGACTTGCGGCAAGCCCTGT........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...............................GTTTTCATTGTTGCAGATGTGGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................G-------------------------------------------------TGG-----------AAAAA-----------------------------TAGAAAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------AGA---CGAGGAGA---CATATTA......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................GAGTGGGCTATG------------------------------------------------------------CAAATG................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................TTGGATCACAAGTTTTCATTGTTGCAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......CCAG---TCGCAGTTGGATCACAAGTTTTCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CACAAGTTTTCATTGTTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TCGCAGTTGGATCACAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGACTTCGACGAATACGA................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
................................TTTTCATTGTTGCAGATGTGGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AAAATATTCTAGACAGAGTGGGG......................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGACGAATACGACGACAA------------AGA---CG......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AG---TCGCAGTTGGATCACAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................GCTATG------------------------------------------------------------CAAATGAT------------------------------------------T--T--GCCAT.........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................CATAATCTAAGACTTGCGGCAAGCCCTG.........................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTTCGACGAATACGACGACAA------------AGA---C.......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ACCAG---TCGCAGTTGGATCACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AGTTGGATCACAAGTTTTCAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
........CAG---TCGCAGTTGGATCATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AACATCAAGAG---CATTGGGTCGAAATTAATTATTGAATTTCGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGGCTATTCA--------------------------------------------C-------------AAACATAT------------------------------------------T--C--GTCATATCAAAAT------GAAGCTAATATTACCT-----------AATTAATTGCAGGACGACTTCGACGAATACGACGACAA------------AGA---CGAGGAGA---TCTATTACATTCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACGACAA------------AGA---CGAGGAGA---TCT..........2411.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACGACAA------------AGA---CGAGGA..................2011.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGACGACAA------------AGA---CGAGGA..................2111.0010000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGACGAATACGACGACAA------------AGA---CGAG....................2711.0010000001
droYak3
ACAGTCATCAG---TCGCAGTTGGATCACAAGTTTTCATTGTTGCAGATGTGGGTGAGTCGCAA-TA------TTTTCACTTTAAAGATAGGAAA-------------------------------------------------TGGTTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAATAATATTTA--TATAGTTATTGTTAATGGA---------------------------------------------------------------------C--GCAATATCAAAAT------GAAACTAATATAACTT-----------AATTAATTTCAGGACGACTTCGACGAATACGACGACAA------------GGA---CGAGGAGA---TCTATTACATTCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGACGAATACGACGACAA------------GGA---CGAGGA..................2911.00100000010000
ACAGTCATCAG---TCGCAGTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAATACGACGACAA------------GGA---CGA.....................2111.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAA------------GGA---CGAGGAGA---TCT..........2011.00110000000000
...................................TCATTGTTGCAGATGTGGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGACAA------------GGA---CGAGGAGA---TC...........2111.00100100000000
......ATCAG---TCGCAGTTGGATCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
droEug1
ATAATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACAAATCTTTA---------TTCCTATTACAGGACGACTTCGACGAATACGACGACAA------------AGA---CGAGGAGA---GCTATTACATTCCSizeHit CountTotal NormTotal
No Reads
droBia1
TTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAAA-AATGTAAA---------TTTCTTTTGCAGGACGACTTCGACGAATACGACGACAA------------AGA---CGAGGAGA---GCTATTACATTCCSizeHit CountTotal NormTotal
No Reads
droTak1
ATGGCCATCAG---TCGCAGTTGGATCACAAGTTTTCATTGTTGCAGATGTGGGTGAGTCTTG----GGAAGGA----------------------------------------------------------------GGATTATGTTTAAATATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSizeHit CountTotal NormTotal
No Reads
droEle1
A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGGACGACTTCGATGAATACGACGAAAA------------AGA---CGAGGAGA---GCTATTACATTCCSizeHit CountTotal NormTotal
No Reads
droRho1
GGTTCGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAT-----T------TAAACTAACCAATTTTAA---------TTCCCATTGCAGGATGACTTCGACGAATACGACGACAA------------AGA---CAAGGAGA---GCTATTACATTCCSizeHit CountTotal NormTotal
No Reads
droFic1
AAACTAATCAA---CCCAATCT------------G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTGCAGGACGACTTCGACGAATACGACGACAA------------AGA---CGAGGAGA---GCTATTACATTCCSizeHit CountTotal NormTotal
No Reads
droKik1
ACGGCAATCAG---TCGCGATTTGAGCACAAGTTTTCGTTGCTGCAGATGTGGGTGAGTCAAG----CGAACGATGTTTTTATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCCCA-----------------------------------------------------------------------GAAAGCCATTCAGTGTTTAAAACCCAATATTCATATATATTTAC---------GATCAATGTAAATTTTGAGACTAAT------------------------------------------T--T--TCA-----------------------ACAT-------------TACTTTCGATTGTAGGACGACTTCGACGATTACGACGACAACGAGGAGGACGAGGATGAGGATGAGA---CCTATTACATTCCSizeHit CountTotal NormTotal
No Reads
droAna3
ACGGTGACCAG---TCGCAGTTGGAACACAATTTTTCATTGTTGCAGATGTGGGTGAGTGTTG----GG-------------------------------------------------------CGCAACCAGG------AA------------------------------------------------------------------------------------------------------------GGATTTAAAAAG---TTCTATTATT----------------------------------------------------------------------------------------------------------------------------------TTATAATTG-----------------------------CTTA---------------------------------------------TTAATC-----------------------A----------TT---------TTATTCTTGCAGGACGACTTCGATGACTACGACGACAA------------AGA---GGACGAGA---GCTATTACATTCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGACAA------------AGA---GGACGAGA---GCT..........2211.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACGACAA------------AGA---GGACGAGA---GCTAT........2711.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTACGACGACAA------------AGA---GGACGA..................2311.001000001
..................................TTCATTGTTGCAGATGTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAA------------AGA---GGACGAGA---GCT..........2011.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGACAA------------AGA---GGACGAGA---GC...........2111.001000010
droBip1
ACGGAGACCAG---TCGCAGTTGGAACACAATTTTTCATTGTTGCAGATGTGGGTGAGTACTT----GGAGGGA-----------------------------------------------------AAACAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACTTCTTTAGAATTTTGTCCTCATGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCGAATA------ATTGCTCATAATATCCGA---------TTACTCTTGCAGGACGACTTCAATGACTACGACGACAA------------AGA---GGACGAGA---GCTATTACATTCCSizeHit CountTotal NormTotal
No Reads
dp5
ACTGCCACCAT---CCGCAGTTGGAGCACAAGTTTTCATTGTTGCAGATGTGGGTGAGTTCGT----TGACTGAT----CGTTGTTCGTTGGCACTGATGGCATCTGTCATCGCAAAGGATGGCCGAAAACTTAAGCAGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCTCTG------------------------------------------AACTCCATACAAATTTTTAACTCA---------------------------------------------TTTATC-----------------------TATTCG-------------TACTTTGTGTTGCAGGACGACTTTGACGACTAC---TATAA------------GGA---CGATGAAA---ACTATTACATTCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................CATTGTTGCAGATGTGGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
...................................TCATTGTTGCAGATGTGGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTAC---TATAA------------GGA---CGATGAAA---ACT..........2511.0010010000000
...............................GTTTTCATTGTTGCAGATGTGGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
droPer2
ACTGCCACCAT---CCGCAGTTTGAGCACAAGTTTTCATTGTTGCAGATGTGGGTGAGTTCGT----TGACTGAT----CGTTGATCGTTGGCACTGATGGCATCTGTCA-CACATAGGATGGCCGAAAACTGGAGCAGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCTCTG------------------------------------------AACTCTATACAAATTTTTAACTCA---------------------------------------------TTTATC-----------------------TATTCG-------------TACTTTGTGTTGCAGGACGACTTTGACGACTAC---GATAA------------GGA---CGATGAAA---ACTATTACATTCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---GATAA------------GGA---CGATGAAA---ACTATT.......2411.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAA------------GGA---CGATGAAA---ACT..........1911.001100000
droWil2
ACCGCCGTTCG---GCACAACTGGAACACAAGTTTTCATTGCTGCAGATGTGGGTGAGTTTTATC--TA--------------ACTGATATGAAG-------------------------------------------------TGTCCTA----GGTCAAAGTGCTTAATAAGGATATTCTGCGAGGCGATCAATTAAAAGCTTCAAATGCTTCAAATTTAACCGCTAAAGTAGGTCACGCAGATGCCTAG--------GAATGT--------TTTTTG-----------------------------GTAGACTCTTAT------------------------------------------------------------CT--------------------------------------------A-------------AAGCATATTTCTTATCACCAGACGAGTGGAACTATTATTAGCAATATTTCT--A--GCCCTTTTGACAATGAGAATAAA-TAACAAATTT-GATTTCT-TTTTCTAATTTCCAGGACGACTTTGACGAATACGAGA---A------AGACGAAGA---TGATGAGA---ACTGTTACATTCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA---A------AGACGAAGA---TGATGAGA---ACT..........2312.00220000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGACTTTGACGAATACGAGA---A------....................................2312.00220000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------AGACGAAGA---TGATGAGA---.............1811.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGAGA---A------AGACGAAGA---TGATGA..................2411.00100100
.......................................................................................................................................................................................................................AAATTTAACCGCTAAAGTAGGT..................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
................................TTTTCATTGCTGCAGATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAATACGAGA---A------AGACGAAGA---TGATGA..................2711.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGACTTTGACGAATACGAGA---A------AGA.................................2611.00100100
................ACAACTGGAACACAAGTTTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
droVir3
ATGGCCAACAG---ACGCAATTGGATCAAAAATTCTCATTGCTGCAGATGTGGGTACGTAGCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................AAAAATTCTCATTGCTGCAGATGTGGGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.001000000000000000000000000000000000000000000000000000000010000000
.....................................ATTGCTGCAGATGTGGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
ATGGTCAGCAG---ACGCAATCGGACGATAAGTTCTCATTGCTGCAGATGTTGGTTAGTAGCCA-CG------ATCATGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGACTCCA--AGCTCT--------T-----------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------------------------------------------------------------------TATAATTCCCGATTTGCTTACATTCAATTCCAGGACTTTTTCGACGATGA---------------------GGA---CGATGAGAACTGCTGTTACATTCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................CATTGCTGCAGATGTTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.......................GACGATAAGTTCTCATTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------GGA---CGATGAGAACTGCTGT........2011.001100000
droGri2
ACGGCCGCCAGCAGACGCAATTCGATCCGAATTTCTCATTGCTGCAGATGTGGGTGAGTTGAAA-T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACACAGATGAGATGATCAGA--TGCGGT--------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAAATA------TATAATAATACTGCCC-----------GCTTTCTTCCAGGACTATTTCGACGACTATGATCAGGA------------CGA---TGAGAACT---GTTGTTACATTCCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGGA------------CGA---TGAGAACT---.............2011.00110

Generated: 05/18/2015 at 01:39 PM