ID:

dsi_23618

 Coordinate:

3l:20389219-20389368 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.8 -29.8 -29.6 -29.6

Flybase annnotation

five_prime_UTR [3l_20389300_20389794_+]; exon [3l_20389300_20390242_+]

No Repeatable elements found

Sense Strand Reads

-----------------------------------------------------------------------------------------------------------------------------------#######################################################################################################################
CATTCTTTATTGACGCGGCCAATTAAGAAGGCAGCGTTGTTGATTTGATTGCGAGGCGAATATGAATGCGACTGGAATTCCTCCATGAGTTATAAATAAAGCTGGGGTCCGAAAAGTTGCCAGATGTAAAGAGCGGCTCTCAGCGGGAGCGGGAACTCCAAGAAGTGGAGGCGCTTTTCTAATCTTGGCCCAAGTTGCAGACTCTATTGCACAAGGCGCTTATCAAAACCAAGCCAAAAACAAAAACTCA
********************************************************************************************.........((...............(((((((.....(((((.(((.((...((((......))))......))))).))))).....)))).)))...))******************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR902009
testis
 M024
male body		 M025
embryo
 SRR618934
dsim w501 ovaries
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
............................................................................................TAAATAAAGCTGGGGTCCGAA......................................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GACTCTATTGCACAAGGCGCTTATCAAA....................... 28 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
.............................................................................................................................................................................CTTTTCTAATCTTGGCCCAAG........................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................AAAACCAAGCCAAAAACAAAA..... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TTGCACAAGGCGCTTATC.......................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................ATAAATAAAGCTGGGGTCCGA.......................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................TGTTGATTTGATTGCGAG................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................GTTGATTTGATTGCGAGGCGA............................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................GTTGTTGATTTGATTGCGAGG.................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.................GCCAATTAAGAAGGCAGCG...................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................ATGCGACTGGAATTCCTCCAT.................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................................TGTTGATTTGATTGCGAGGCGTT.............................................................................................................................................................................................. 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................AGCGGGAACTCCAAGAAGTGG.................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........ATTGACGCGGCCAATTAA................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................AACTCTAAGCGGTGGAGGCGC............................................................................ 21 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0
...................................................................GAGACTGGAATTCCT........................................................................................................................................................................ 15 1 7 0.43 3 0 0 0 0 1 0 0 2 0 0
...............................................................GAAGGCGACTGGAAGTCCCC....................................................................................................................................................................... 20 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................AACTCTAAGCGGTGGAGGC.............................................................................. 19 3 8 0.25 2 0 0 0 0 2 0 0 0 0 0
................................................................ATTGCGACTGGAATGCCT........................................................................................................................................................................ 18 2 8 0.13 1 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................CTCCAAGAATTGGAGCC.............................................................................. 17 2 11 0.09 1 0 0 0 0 1 0 0 0 0 0
...............................................................GAAGGCGACTGGAAT............................................................................................................................................................................ 15 1 12 0.08 1 0 0 0 0 1 0 0 0 0 0
...............................................................................................ATAAACCTGGGGTCGG........................................................................................................................................... 16 2 17 0.06 1 0 0 0 0 0 0 0 0 0 1
..................................................................GGAGACTGGAATTCCT........................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1
..............................................................................................................................................GCGGGGGCGGGAACACC........................................................................................... 17 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0
.............................................................ATGAAGGCGACTGGAGT............................................................................................................................................................................ 17 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

GTAAGAAATAACTGCGCCGGTTAATTCTTCCGTCGCAACAACTAAACTAACGCTCCGCTTATACTTACGCTGACCTTAAGGAGGTACTCAATATTTATTTCGACCCCAGGCTTTTCAACGGTCTACATTTCTCGCCGAGAGTCGCCCTCGCCCTTGAGGTTCTTCACCTCCGCGAAAAGATTAGAACCGGGTTCAACGTCTGAGATAACGTGTTCCGCGAATAGTTTTGGTTCGGTTTTTGTTTTTGAGT
********************************************************.........((...............(((((((.....(((((.(((.((...((((......))))......))))).))))).....)))).)))...))******************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 M024
male body		 SRR553488
RT_0-2 hours eggs
 M023
head
 SRR553486
Makindu_3 day-old ovaries
..........................................................................................................................................................................................CCGGGTTCAACGTCTGAGATA........................................... 21 0 1 2.00 2 0 0 1 1 0
............................................................................TAAGGAGGTACTCAATATTTA......................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0
........................................................................................................................................................................................AACCGGGTTCAACGTCTGAG.............................................. 20 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................TCAACGTCTGAGATAACGTGT..................................... 21 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................CAACGTCTGAGATAACGTGTT.................................... 21 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................TCGCCCTCGCCCTTGAGGTT......................................................................................... 20 0 1 1.00 1 1 0 0 0 0
................................................AACGCTCCGCTTATACTTAC...................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.....................................................TCCGCTTATACTTACGCTGAC................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................................................................................................GTTCGGTTTTTGTTTTTGAGT 21 0 1 1.00 1 0 1 0 0 0
................................................................................................................................TTCTCGCCGAGAGTCGCCCTC..................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................TAGTTTTGGTTCGGTTTTTG......... 20 0 1 1.00 1 1 0 0 0 0
................................................................................GAGGTACTCAATATTTATTTC..................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
............TGGGCCGGTTAATTC............................................................................................................................................................................................................................... 15 1 5 0.20 1 0 0 0 0 1
.................................................................................................................................................................................................CAACGTCTTAGATAA.......................................... 15 1 5 0.20 1 0 0 1 0 0
........................................................................................................................................................................................TACTGGGTTCAACGTCT................................................. 17 2 20 0.05 1 0 0 1 0 0
.....................................................................GTGACCTCAAGGAGGTA.................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:20389169-20389418 + dsi_23618 CATTCTTTATTGACGCGGCCAATTAAGAAGGCAGCGTTGTT-----GATTTGATTGCGAGGC--GAA----TATGAATGCGAC--TGGAATTCCT----CCAT------------GAGTTATAA----ATAA------AGCTGGGGTCC-GA-AAAGTTG-CCAGATGTAAAGAGCGG---CTCTCAGC---G--------GGAGCGGG----AA--CTCCAAGAAGTGGA--GGCGCTTTTCTAATCTTGGCCCAAGTTGC--AGACTCT---------------------------ATTGCAC----AAG---GCGCTTATC--------------AAAA------------------C--CAAGCCAAAA--A---C---------A-AA---AACTCA
droSec2 scaffold_11:726707-726800 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTAATCTTAGCCCAAGTTGC--AGACTCT---------------------------ATTGCTTATCAAAA---CCGCTTATCAAAAGGCGCTTATCAAAA------------------C--CGAGCCAAAA--A---C---------A-AA---AACTCA
dm3 chr3L:20830867-20831111 + CATTCTTTATTGACGCGGCCAATTAAGAAGGCAGCGTTGTT-----GATTTGATTGCGAGGC--GAA----TATGAATGCGAC--TGGAATTCCT----CCAT------------GAGTTCTAA----ATAA------AGCTGGAGTCC-GA-AAAGTTG-CCAGATGTAAAGAGCGGCGGCTCTCAGTC--G--------CT---GGG----AA--CTCCAAGAAGTGGA--GGCGATTTTCTAATCTTGGCCCAAGTTAC--AGACTCT---------------------------ATTGCAC----AAG---GGGCTTATC--------------AGAA------------------C--CAAGCCA---------------------AA---AACTTA
droEre2 scaffold_4784:20518223-20518459 + CATTCTTTATTGAGGCGGCCAATTAAGAAGACAGCGTTGTT-----GATTTGATTGCGAGGC--GAA----TATGAATGCGAC--TGGAATTCCT----GCAT------------GAGTTATAA----ATAA------AGCTGGTTCCC-GA-AAAGTTG-CCAGATGTAAAGAGCGG---CTCTCAGTC--G--------AT---AGG----AA--CTCCAAAAACTGGA--GGC---TTTTTAATCTTGGCACAAATTAA--CGATTGT---------------------------ATTGCAC----AAG---AGGCCTATC--------------AAAA------------------CAAA-----A-----A---C------------A---AAGTCA
droYak3 3L:19708680-19708905 - CATTCTTTATTGACGCGGCCAATTAAGAATACAGCGTTGTT-----GATTTGATTGCGAGAC--GAA----TATGAATGCGAC--TGGAATTCCT----CCCT------------GAGTTATAA----ATA----------------------AAAGTTG-CCAGATGTAAAGAGCGG---CTCTCAGTC--G--------AA---AGA----AA--CTCCAAAAATTGTT--GGCT--TTTTTTATCTTGGCACAAGTTAC--AAATTCT---------------------------ATTGCTC----AAG---AGGCTTATC--------------AAAG------------------CAAC-----A-----A---C---------A-AA---AAGGCA
droEug1 scf7180000409711:5167045-5167296 - CATTCTTTATTGACGCGGCCAATTAAGAAGGCAGCGCTGTT-----GATTTGATTGCCAAGC--GAA----TATGAATGCGAC--TGGAATTTCT----CCAT------------GAGTTATATT--TATAA------AGCGGGTCCCCCAAAAAAGTTG-CCAGATGAGAAAAGCGGTTCCTCCCAATC--G--------AT---AGG----AA--CTCCA--AACTGGAAAAACT-TTTTCTAATCTCAGACCAAGTTAC--AGATTCT---------------------------ATTGCAC----AAG---AAGCTTATC--------------AAAA------------------CGA-------------AAACGA----AACA-AC---AA-CAA
droBia1 scf7180000302193:5217908-5218163 - CATTCTTTATTGACGCGGCCAATTAAGAAGGCAGCGCCGTT-----GATTTGATTGCAAGGC--GAC----TGTGGATGCGGC--TGGAATTCCTCCCTCCAC------------GAGTTATAA----ATAT------AGCTGCTGCTC-GA-GAAGTTG-CCAGATGTGAATGGCGG---CTACCAAGC--GA-------AT---TGG----AA--CTCCA--AACTGGA-AAACT--TTTCTAATCTCGGCCCGGGTTAC--AGACTCT---------------------------GTTGCAC----AAG---GCGCTTATC--------------AAGA------------------CGA----CCAAAA--G---CGAAGAGAGCT-G----AAATAA
droTak1 scf7180000415664:83410-83664 - CATTCTTTATTGACGCGGCCAATTAAGAAGGCAGCGTTGTTGAGTTGATTTGATTGCAAGGC--GAA----TATGAATGCGGC--TGGAATTCCT----CCAT------------GAGTTATAA----ATAT------AGCTCGTTCTC-GA-AAAGTGG-CCAGACGTGAAAATCGGT--CGCCCGATC--G--------AT---TGG----AA--CTCCA--AACTGGA-AAACT--TTTCTAACCTCGGCCCAACTCAC--AGATTCT---------------------------GTTGCAC----AAGA--AAGCTTATC--------------AAAA------------------AATA-----A-A-TAAAAA--A----AATA-AA---AACAAA
droEle1 scf7180000491193:2547223-2547463 - CGTTCTTTATTGACGCGACCAATTAAGAAGGCAACGTTGTT-----GATTTGATTGCAAGGC--GAA----TATGAATACAAC--TGGAATTCCT----ATAT------------GGGTTATAA----ATAA------AGCTGGGCCCCCGAAAGGGCTGTTCAGATGTGGAGAGCGG---CTGCCGATC--G--------AG---AGG----AA--CTCCG--AACTGAG-AAACG--TTTCTAATCTTGGCCCAAGTTAC--AGTTTCC---------------------------ATTGCAC----AAGAAGAAGCTTATC--------------AAAA------------------G--T-----G-----AAAA------------------AAATA
droRho1 scf7180000779741:105260-105472 + CGTTCTTTATTGACGCGGCCAATTAAGAAGGCAACGTTCTT-----GATTTGATTGCAAGGC--GTA----T---------------GAATTCCT----GTAT------------GAGTTATAA----ATAA------AGCTGGTCGCC-GA-AAAGTGG-TCAGACGTGGAGAGCGG---CTCCCAATC--G--------AG---AGA----AA--CTCCG--GACTGA--AAACT--TTTCTAATCTCAGCCCATGTTAC--AGATTCT---------------------------ATTGCAC----AAG---GAGCTTATC--------------AAAA------------------G--------------------------------------AAA
droFic1 scf7180000453819:84808-85045 + CATTCTTTATTGACGCGGCCAATTAAGAAGGCAGCGTTGTT-----GATTTGATTGCAAGGC--GAA----TACGAATGCGAC--TGTCATGCCT----CAAT------------AAGCTATAA----ATAA------GGCTGGATCCC-GA-AAAGTTG-CCAGATGTGGAGAGCGG---CTTCCAAAC--G--------AG---AGG----AA--CTCCA--AACTGGAAAAACT--TTTCTAATCTCGGCCCCCGTTAC--AGATTCT---------------------------ATTGCAC----AAG---AAGCTTATC--------------AGAG------------------AAAC-----G-----AAAAC------------------GGAA
droKik1 scf7180000302697:506134-506371 + CATTCTTTATTGACGCGGCCAATTAAGAAGGCAGCGCCGTT-----GCCTTGATTGCCTGGC--GAATGGGTATGAATATGACTCTGGAATTC-------CAT------------GGACTATAAA--TATAAAAATCAAGCTGGGCCCC-AA-AAAGTAG-CCAGATGCGC-----------TC--GCCC--G---------------------------TA--AGCTAGGAAAACA--TTTCTAATCTCGGCCCAAGTTACACAGATTTCA-----------------------CGAGTTGCAC----AAG---AAGCTTATC--------------ATCA----------------CAC-AC-----A-----AAAAA-----------CA---AAC--T
droAna3 scaffold_13337:8852362-8852619 - CATTCTTTATTGACGCGGCCAATTAAGACGGCAGCGTTGTT-----GATTTGATTGCAAGGC--TGG----AGCGAATATGGC--TGGAATTCCAT--ATTAT------------GAGTTAAAA----ATAA------AGCTGGGCTCT-GATCAAGTTG-CCAGATGTGGTAAACGA---CC---AA--GGGAACCA---AT---TGG----AA--GGGTG--GAGTAA--AAAAT--CATCTATTCTCGGCTAGAGCTAC--AGATTCC--------------------------CATTGCAC----AAG---ATGCTTATC--------------AGAGTCGGAGGCGC---CGTCAT-CC-----A-----AAC-----------AGAA---A--ACC
droBip1 scf7180000396541:994114-994377 - CATTCTTTATTGACGCGGCCAATTAAGACGGCAGCGTTGTT-----GATTTGATTGCAAGGC--TGG----AGCGAATGTGGC--TGGAATTCCA-------TATACCATATTACGAGTTAAAA----ATAA------AGCTGGGCTCCCGATCAAGTTG-CCAGACGGAGAAAACGA---TA---AA--GGGCATCAGAGGG---AGGAGGGATAGCTCT-------------TCC--AATTTAATCTCGTCCAGAGCTAC--AGACTCC--------------------------CATTGCAC----AAG---AAGCTTATC--------------AGAGTATTAGGCGCCGCCGCCAT-CC-----A--------------------------AACAGA
dp5 XR_group6:1317311-1317587 - CATTCTTTATTGAGGCAACCAATTAAGAAGGCGGCGCTGTT-----GATTTGATTGCAATGCTCGAG----TGAGAGTACGGC--TGGAATTC-------TAT------------GAATTATACTCTCATAAGTCGCTCGCTTGGCTCC-AGGCACGCAG-TCAGATGAAAAGCAT--TGAGCCCTGGTC--A--------AA---GGG----AAAGCTCCA----------GAACC--TGTCTAATCGCGGTCCAAGTCTC--AGATTGTACTCACAGTATTCGGATTCGGATTCGGATTGCAC----AAG---CCGCTTATC--------------AAAC-----------------AC-AC-----A-----AAAAA-----------AAAACTACTCC
droPer2 scaffold_12:2006345-2006620 - CATTCTTTATTGAGGCAACCAATTAAGAAGGCGGCGCTGTT-----GATTTGATTGCAATGCTCGAG----TGAGAGTACGGC--TGGAATTC-------TAT------------GAATTATACTCTCATAAGTCTCTCGCTTGGCTCC-AGGCACGCAG-TCAGATGAAAAGCAT--TGAGCCCTGGTC--A--------AA---GGG----AAAGCTCCA----------GAACC--TGTCTAATCGCGGTCCAAGTCTC--AGATTGTACTCACAGTATTCGGATTCGGATTCGGATTGCAC----AAG---CCTCTTATC--------------AAAA------------------CA-C-----A-----AAAAA-----------AAAACTACTCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CATTCTTTATTGACGCGGCCAATTAAGAAGGCAGCGTTGTT-----GATTTGATTGCGAGGC--GAA----TATGAATGCGAC--TGGAATTCCT----CCAT------------GAGTTATAA----ATAA------AGCTGGGGTCC-GA-AAAGTTG-CCAGATGTAAAGAGCGG---CTCTCAGC---G--------GGAGCGGG----AA--CTCCAAGAAGTGGA--GGCGCTTTTCTAATCTTGGCCCAAGTTGC--AGACTCT---------------------------ATTGCAC----AAG---GCGCTTATC--------------AAAA------------------C--CAAGCCAAAA--A---C---------A-AA---AACTCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................TAA----ATAA------AGCTGGGGTCC-GA-A........................................................................................................................................................................................................................................................2112.00200000000000002000
.........................................................................................................................................................................................................................................................................GACTCT---------------------------ATTGCAC----AAG---GCGCTTATC--------------AAA.............................................................2812.00200200000000000000
.............................................................................................................................................................................................................................................CTTTTCTAATCTTGGCCCAAG................................................................................................................................................2111.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................AAAA------------------C--CAAGCCAAAA--A---C---------A-AA---A.....2111.00100001000000000000
...........................................................................................................................................................................................................................................................................................................TTGCAC----AAG---GCGCTTATC--------------................................................................1811.00100001000000000000
........................................................................................................................ATAA----ATAA------AGCTGGGGTCC-GA-.........................................................................................................................................................................................................................................................2111.00100001000000000000
.....................................TGTT-----GATTTGATTGCGAG......................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
......................................GTT-----GATTTGATTGCGAGGC--GA................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
...................................GTTGTT-----GATTTGATTGCGAGG.....................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
.................GCCAATTAAGAAGGCAGCG..............................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000000000
............................................................................ATGCGAC--TGGAATTCCT----CCAT------------...............................................................................................................................................................................................................................................................................................2111.00101000000000000000
.....................................TGTT-----GATTTGATTGCGAGGC--GTT----...........................................................................................................................................................................................................................................................................................................................................2311.00100000000000001000
...........................................................................................................................................................................................................AGCGGG----AA--CTCCAAGAAGTGG............................................................................................................................................................................2111.00100000000000001000
........ATTGACGCGGCCAATTAA........................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
droSec2
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTAATCTTAGCCCAAGTTGC--AGACTCT---------------------------ATTGCTTATCAAAA---CCGCTTATCAAAAGGCGCTTATCAAAA------------------C--CGAGCCAAAA--A---C---------A-AA---AACTCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................TTTTTAATCTTAGCCCAAGT...............................................................................................................................................2011.0010010
dm3
CATTCTTTATTGACGCGGCCAATTAAGAAGGCAGCGTTGTT-----GATTTGATTGCGAGGC--GAA----TATGAATGCGAC--TGGAATTCCT----CCAT------------GAGTTCTAA----ATAA------AGCTGGAGTCC-GA-AAAGTTG-CCAGATGTAAAGAGCGGCGGCTCTCAGTC--G--------CT---GGG----AA--CTCCAAGAAGTGGA--GGCGATTTTCTAATCTTGGCCCAAGTTAC--AGACTCT---------------------------ATTGCAC----AAG---GGGCTTATC--------------AGAA------------------C--CAAGCCA---------------------AA---AACTTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................GTTGTT-----GATTTGATTGCGAGG.....................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001010000000000
..................................CGTTGTT-----GATTTGATTGCG........................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.......................................................................TATGAATGCGAC--TGGAATTCCT----CCAT------------...............................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................TTGTT-----GATTTGATTGCGAGGC--..................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................GTT-----GATTTGATTGCGAGGC--GA................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TGAATGCGAC--TGGAATTCCT----CCAT------------GAGT...........................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................CGGCTCTCAGTC--G--------CT---GGG----AA--C........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................CGGCTCTCAGTC--G--------CT---GGG----AA--.........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CAATTAAGAAGGCAGCGT.............................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TTGCAC----AAG---GGGCTTATC--------------AGAA------------------C--CAA....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TTTTCTAATCTTGGCCCAAGTTAC--A.........................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................T---------------------------ATTGCAC----AAG---GGGCTTATC--------------A...............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................CAGATGTAAAGAGCGGCGGCT...........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TGCGAGGC--GAA----TATGAATGCGAC--TGGA.........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TTAC--AGACTCT---------------------------ATTGCAC----AAG---GGGCT..................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
........................................................................ATGAATGCGAC--TGGAATTCCT----CCAT------------GAGT...........................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................A------AGCTGGAGTCC-GA-AAAGTTG-CC...............................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................TGTT-----GATTTGATTGCGAGGC--GA................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AGGCAGCGTTGTT-----GATTTGA.............................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ATTCTTTATTGACGCGGCCA.............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
..............................................GATTTGATTGCGAGGC--GA................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...........GACGCGGCCAATTAAGAAGGC..................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGAAGGCAGCGTTGTT-----GAT.................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................................................................................................................................................TAAAGAGCGGCGGCTCTCAGTC--G--------CT---G...................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................GTT-----GATTTGATTGCGAGGC--..................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................................................................................................................................................TTG-CCAGATGTAAAGAGCGGC...............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATTAAGAAGGCAGCGTTGTT-----GATTT...............................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................CAGCGTTGTT-----GATTTGATTGC.........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.......TATTGACGCGGCCAATTAAGAAGGCAG................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................G-CCAGATGTAAAGAGCGG................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................TTCCT----CCAT------------GAGTTCTAA----ATAA------AGCTGGAG................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AATTAAGAAGGCAGCGTTGTT-----GATT................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................AC--TGGAATTCCT----CCAT------------GAGTT..........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CTTGGCCCAAGTTAC--AGACTC....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................TAA----ATAA------AGCTGGAGTCC-GA-A........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................TTTGATTGCGAGGC--GAA----TATGAATGC..................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................TGCAC----AAG---GGGCTTATC--------------AGAA------------------C--CAA....................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................C--AGACTCT---------------------------ATTGCAC----AAG---GGG....................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TATTGACGCGGCCAATTAAGAAGGCA.................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TC--G--------CT---GGG----AA--CTCCAAGAAG...............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TAAGAAGGCAGCGTTGTT-----GATT................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
....................................TTGTT-----GATTTGATTGCGAGGA--..................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TCCAAGAAGTGGA--GGCGATTTTCTAA............................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................T-----GATTTGATTGCGAGGC--GAA----T..........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......................................................................................................................................................................................TCTCAGTC--G--------CT---GGG----AA--CTCCAAGAAGTGGA--.........................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GAAGGCAGCGTTGTT-----GATTTG..............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................G----AA--CTCCAAGAAGTGGA--GGCGA....................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGAAGGCAGCGTTGTT-----GATTT...............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CGATTTTCTAATCTTGGCCCA..................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TCT---------------------------ATTGCAC----AAG---GGGCTTATC--------------AGAA------------------C--.......................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TAA------AGCTGGAGTCC-GA-AAAGT....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....TTTATTGACGCGGCCAAT...........................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CATTCTTTATTGAGGCGGCCAATTAAGAAGACAGCGTTGTT-----GATTTGATTGCGAGGC--GAA----TATGAATGCGAC--TGGAATTCCT----GCAT------------GAGTTATAA----ATAA------AGCTGGTTCCC-GA-AAAGTTG-CCAGATGTAAAGAGCGG---CTCTCAGTC--G--------AT---AGG----AA--CTCCAAAAACTGGA--GGC---TTTTTAATCTTGGCACAAATTAA--CGATTGT---------------------------ATTGCAC----AAG---AGGCCTATC--------------AAAA------------------CAAA-----A-----A---C------------A---AAGTCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................GTTGTT-----GATTTGATTGCGAGGC--..................................................................................................................................................................................................................................................................................................................................................2211.0010000100
................................................................GAA----TATGAATGCGAC--TGGAATTCCT----...............................................................................................................................................................................................................................................................................................................2511.0010000100
....................................................................................................................................................................GATGTAAAGAGCGG---CTCTCAGTC--G--------AT---A...................................................................................................................................................................................................2711.0011000000
...................................................................................................................................A------AGCTGGTTCCC-GA-AAAGT....................................................................................................................................................................................................................................................1911.0010001000
droYak3
CATTCTTTATTGACGCGGCCAATTAAGAATACAGCGTTGTT-----GATTTGATTGCGAGAC--GAA----TATGAATGCGAC--TGGAATTCCT----CCCT------------GAGTTATAA----ATA----------------------AAAGTTG-CCAGATGTAAAGAGCGG---CTCTCAGTC--G--------AA---AGA----AA--CTCCAAAAATTGTT--GGCT--TTTTTTATCTTGGCACAAGTTAC--AAATTCT---------------------------ATTGCTC----AAG---AGGCTTATC--------------AAAG------------------CAAC-----A-----A---C---------A-AA---AAGGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................C--TGGAATTCCT----CCCT------------GAGTT..........................................................................................................................................................................................................................................................................................2020.50100100000000
..........................GAATACAGCGTTGTT-----GATT................................................................................................................................................................................................................................................................................................................................................................1920.50100000010000
..........................................................................................................................AA----ATA----------------------AAAGTTG-CCAGATGT.........................................................................................................................................................................................................................................2020.50101000000000
droEug1
CATTCTTTATTGACGCGGCCAATTAAGAAGGCAGCGCTGTT-----GATTTGATTGCCAAGC--GAA----TATGAATGCGAC--TGGAATTTCT----CCAT------------GAGTTATATT--TATAA------AGCGGGTCCCCCAAAAAAGTTG-CCAGATGAGAAAAGCGGTTCCTCCCAATC--G--------AT---AGG----AA--CTCCA--AACTGGAAAAACT-TTTTCTAATCTCAGACCAAGTTAC--AGATTCT---------------------------ATTGCAC----AAG---AAGCTTATC--------------AAAA------------------CGA-------------AAACGA----AACA-AC---AA-CAASizeHit CountTotal NormTotal
No Reads
droBia1
CATTCTTTATTGACGCGGCCAATTAAGAAGGCAGCGCCGTT-----GATTTGATTGCAAGGC--GAC----TGTGGATGCGGC--TGGAATTCCTCCCTCCAC------------GAGTTATAA----ATAT------AGCTGCTGCTC-GA-GAAGTTG-CCAGATGTGAATGGCGG---CTACCAAGC--GA-------AT---TGG----AA--CTCCA--AACTGGA-AAACT--TTTCTAATCTCGGCCCGGGTTAC--AGACTCT---------------------------GTTGCAC----AAG---GCGCTTATC--------------AAGA------------------CGA----CCAAAA--G---CGAAGAGAGCT-G----AAATAASizeHit CountTotal NormTotal
No Reads
droTak1
CATTCTTTATTGACGCGGCCAATTAAGAAGGCAGCGTTGTTGAGTTGATTTGATTGCAAGGC--GAA----TATGAATGCGGC--TGGAATTCCT----CCAT------------GAGTTATAA----ATAT------AGCTCGTTCTC-GA-AAAGTGG-CCAGACGTGAAAATCGGT--CGCCCGATC--G--------AT---TGG----AA--CTCCA--AACTGGA-AAACT--TTTCTAACCTCGGCCCAACTCAC--AGATTCT---------------------------GTTGCAC----AAGA--AAGCTTATC--------------AAAA------------------AATA-----A-A-TAAAAA--A----AATA-AA---AACAAASizeHit CountTotal NormTotal
No Reads
droEle1
CGTTCTTTATTGACGCGACCAATTAAGAAGGCAACGTTGTT-----GATTTGATTGCAAGGC--GAA----TATGAATACAAC--TGGAATTCCT----ATAT------------GGGTTATAA----ATAA------AGCTGGGCCCCCGAAAGGGCTGTTCAGATGTGGAGAGCGG---CTGCCGATC--G--------AG---AGG----AA--CTCCG--AACTGAG-AAACG--TTTCTAATCTTGGCCCAAGTTAC--AGTTTCC---------------------------ATTGCAC----AAGAAGAAGCTTATC--------------AAAA------------------G--T-----G-----AAAA------------------AAATASizeHit CountTotal NormTotal
No Reads
droRho1
CGTTCTTTATTGACGCGGCCAATTAAGAAGGCAACGTTCTT-----GATTTGATTGCAAGGC--GTA----T---------------GAATTCCT----GTAT------------GAGTTATAA----ATAA------AGCTGGTCGCC-GA-AAAGTGG-TCAGACGTGGAGAGCGG---CTCCCAATC--G--------AG---AGA----AA--CTCCG--GACTGA--AAACT--TTTCTAATCTCAGCCCATGTTAC--AGATTCT---------------------------ATTGCAC----AAG---GAGCTTATC--------------AAAA------------------G--------------------------------------AAASizeHit CountTotal NormTotal
No Reads
droFic1
CATTCTTTATTGACGCGGCCAATTAAGAAGGCAGCGTTGTT-----GATTTGATTGCAAGGC--GAA----TACGAATGCGAC--TGTCATGCCT----CAAT------------AAGCTATAA----ATAA------GGCTGGATCCC-GA-AAAGTTG-CCAGATGTGGAGAGCGG---CTTCCAAAC--G--------AG---AGG----AA--CTCCA--AACTGGAAAAACT--TTTCTAATCTCGGCCCCCGTTAC--AGATTCT---------------------------ATTGCAC----AAG---AAGCTTATC--------------AGAG------------------AAAC-----G-----AAAAC------------------GGAASizeHit CountTotal NormTotal
No Reads
droKik1
CATTCTTTATTGACGCGGCCAATTAAGAAGGCAGCGCCGTT-----GCCTTGATTGCCTGGC--GAATGGGTATGAATATGACTCTGGAATTC-------CAT------------GGACTATAAA--TATAAAAATCAAGCTGGGCCCC-AA-AAAGTAG-CCAGATGCGC-----------TC--GCCC--G---------------------------TA--AGCTAGGAAAACA--TTTCTAATCTCGGCCCAAGTTACACAGATTTCA-----------------------CGAGTTGCAC----AAG---AAGCTTATC--------------ATCA----------------CAC-AC-----A-----AAAAA-----------CA---AAC--TSizeHit CountTotal NormTotal
No Reads
droAna3
CATTCTTTATTGACGCGGCCAATTAAGACGGCAGCGTTGTT-----GATTTGATTGCAAGGC--TGG----AGCGAATATGGC--TGGAATTCCAT--ATTAT------------GAGTTAAAA----ATAA------AGCTGGGCTCT-GATCAAGTTG-CCAGATGTGGTAAACGA---CC---AA--GGGAACCA---AT---TGG----AA--GGGTG--GAGTAA--AAAAT--CATCTATTCTCGGCTAGAGCTAC--AGATTCC--------------------------CATTGCAC----AAG---ATGCTTATC--------------AGAGTCGGAGGCGC---CGTCAT-CC-----A-----AAC-----------AGAA---A--ACCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.ATTCTTTATTGACGCGGCCA.............................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...............................................................................................................................................................................................................................................................................................................AC----AAG---ATGCTTATC--------------AGAGTCGGAGGCGC---...............................................2811.001000010
...............................................................................................................................................................................CGA---CC---AA--GGGAACCA---AT---TGG----AA--GGGT.....................................................................................................................................................................................2611.001000010
..............................................................................................................................................................................................................................................................................................................CAC----AAG---ATGCTTATC--------------AGAGT...........................................................2011.001000010
.......................................................................................................................................................................................................................................................................................................................G---ATGCTTATC--------------AGAGTCGGAGG.....................................................2111.001100000
......................................................................................................T------------GAGTTAAAA----ATAA------AGCTGGG.................................................................................................................................................................................................................................................................2111.001010000
droBip1
CATTCTTTATTGACGCGGCCAATTAAGACGGCAGCGTTGTT-----GATTTGATTGCAAGGC--TGG----AGCGAATGTGGC--TGGAATTCCA-------TATACCATATTACGAGTTAAAA----ATAA------AGCTGGGCTCCCGATCAAGTTG-CCAGACGGAGAAAACGA---TA---AA--GGGCATCAGAGGG---AGGAGGGATAGCTCT-------------TCC--AATTTAATCTCGTCCAGAGCTAC--AGACTCC--------------------------CATTGCAC----AAG---AAGCTTATC--------------AGAGTATTAGGCGCCGCCGCCAT-CC-----A--------------------------AACAGASizeHit CountTotal NormTotal
No Reads
dp5
CATTCTTTATTGAGGCAACCAATTAAGAAGGCGGCGCTGTT-----GATTTGATTGCAATGCTCGAG----TGAGAGTACGGC--TGGAATTC-------TAT------------GAATTATACTCTCATAAGTCGCTCGCTTGGCTCC-AGGCACGCAG-TCAGATGAAAAGCAT--TGAGCCCTGGTC--A--------AA---GGG----AAAGCTCCA----------GAACC--TGTCTAATCGCGGTCCAAGTCTC--AGATTGTACTCACAGTATTCGGATTCGGATTCGGATTGCAC----AAG---CCGCTTATC--------------AAAC-----------------AC-AC-----A-----AAAAA-----------AAAACTACTCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................TTGTACTCACAGTATTCGGA...................................................................................................................2011.0010100000000
....................................................................................................................................................................................................................................................AATCGCGGTCCAAGTCTC--AG........................................................................................................................................2011.0010100000000
..........TGAGGCAACCAATTAAGA......................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
............................................................................GTACGGC--TGGAATTC-------TAT------------GA.............................................................................................................................................................................................................................................................................................2011.0010100000000
..........................................................................................................................................................................................................................TCCA----------GAACC--TGTCTAATCGCG.......................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................................AA---GGG----AAAGCTCCA----------GAACC--TG.................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................CTAATCGCGGTCCAAGTCTC--AGATTG....................................................................................................................................2611.0010100000000
droPer2
CATTCTTTATTGAGGCAACCAATTAAGAAGGCGGCGCTGTT-----GATTTGATTGCAATGCTCGAG----TGAGAGTACGGC--TGGAATTC-------TAT------------GAATTATACTCTCATAAGTCTCTCGCTTGGCTCC-AGGCACGCAG-TCAGATGAAAAGCAT--TGAGCCCTGGTC--A--------AA---GGG----AAAGCTCCA----------GAACC--TGTCTAATCGCGGTCCAAGTCTC--AGATTGTACTCACAGTATTCGGATTCGGATTCGGATTGCAC----AAG---CCTCTTATC--------------AAAA------------------CA-C-----A-----AAAAA-----------AAAACTACTCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................GTACGGC--TGGAATTC-------TAT------------G..............................................................................................................................................................................................................................................................................................1911.001010000
......................................................................................................................................................................................................................AAGCTCCA----------GAACC--TGTCTC.............................................................................................................................................................1911.001001000
.................................................TTGATTGCAATGCTCGAG----TGA........................................................................................................................................................................................................................................................................................................................................2111.001000001

Generated: 05/19/2015 at 01:43 AM