ID:

dsi_23541

 Coordinate:

x:5793191-5793520 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.2 -28.0 -27.7

Flybase annnotation

five_prime_UTR [x_5793106_5793744_-]; exon [x_5792921_5793744_-]

Repeatable elements

NameClassFamilyStrand
(CAA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##############################################################################################################################################################################################################################################################################################################################################################################################################################################
AGATTGTCAGGGAACTTCACTTCATTTACGCTCCCAAACAAACGGCAAAGGTAGCCTTTCAAAAGCGAATTAAATCGAAATCCAAAAAGAAATAGAAATAGAATTAGAAAAGCCATAAGCGCAAGTTAACGAGACAAGACAACAACAATTCGATTCGGCGGTTTTTGTTTTTTGCCAGTGTGTGTTTGTGCTACGCTGTGAGTGTGCATTAGTGTGTGTCCGGTGCTCCTGTTGTTGTTGTTCTTGTTGCTGTTGTTTTCGCTTATTGTTGTTCTTGCTGTTATTGTTGCTGTTGTTCGCAAGGCACAATAACACAGGCTCATACAATTGCGAATATTTAGAAAAAGCAAAGCATATACATATGTGACAACAAACGCCAGGGAAAAACAGGAAAGCTGAGCAAAGGAAAACCAAATAAGAAAACAAGCAA
******************************************************************************************************************************************(((((((((((..((..((.(((.......((..((((((((((.((....))))))))).......)))..)).......))).)).))..))))))))))).....................************************************************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M053
female body
 SRR902009
testis
 M024
male body		 M023
head
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
...............................................................................................................................................................................................................................................GTTCTTGTTGCTGTTGTTTTCGC........................................................................................................................................................................ 23 0 1 5.00 5 3 0 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................GTTGTTCTTGTTGCTGTTGTTTTCGC........................................................................................................................................................................ 26 0 1 3.00 3 0 0 0 2 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................TTGTTGTTCTTGCTGTTATTGTTGC............................................................................................................................................ 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................ACAACAACAATTCGATTCGGC............................................................................................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................TTGTTGTTGTTCTTGTTGC.................................................................................................................................................................................... 19 0 7 1.14 8 0 0 0 0 0 0 8 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................TGTTGTTCGCAAGGCACAATAACA.................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................CGAAATCCAAAAAGAAATAGA.............................................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................CAAGGCACAATAACACAGGCTC............................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................TATACATATGTGACAACAAACGCCAGGGG............................................... 29 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................TCGCAAGGCACAATAACACAGGCTCATA.......................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...TTGTCAGGGAACTTCACTT........................................................................................................................................................................................................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................TTTACGCTCCCAAACAAACGG................................................................................................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................ATATACATATGTGACAACAAACGCCAGG................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TTTTTGCCAGTGTGTGTTTGTG................................................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................TGTTTGTGCTACGCTGTGAGTGT................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................AGACAACAACAATTCGATTCGGCGGTT........................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AACAATTCGATTCGGCGGG............................................................................................................................................................................................................................................................................ 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................AAGGCACAATAACACAGGCTC............................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.........................TTACGCTCCCAAACAAACGG................................................................................................................................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................ACAACAATTCGATTCGGCGGG............................................................................................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................GTTCTTGTTGCTGTTGTTTTCG......................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AACAATTCGATTCGGCGGTTTT......................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................................CAACAACAATTCGATTCGGCGG............................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................................ATATGTGACAACAAACGC..................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................GACAACAACAATTCGATTCGGCG.............................................................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......................CATTTACGCTCCCAAACAAACGGCAAAG............................................................................................................................................................................................................................................................................................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................ACAACAATTCGATTCGGCGG............................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................................TACATATGTGACAACAAACGCCAGGGA............................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................ATTAAATCGAAATCCAAAAAG..................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................................................................CTTATTGTTGTTCTTGCTGTT.................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................................................ACAGGAAAGCTGAGCAAAGGA....................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................AATTCGATTCGGCGGTTTT......................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TCCGGTGCTCCTGTTGTTGTTGTTC........................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................AACAATTCGATTCGGCGGTTT.......................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TGTGTTTGTGCTACGCTGTGA..................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................TAAATCGAAATCCAAAAAGAAATAGA.............................................................................................................................................................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................................TGTGACAGCAAGCGCCAGGGA............................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................TGTTCTTGTTGCTGTTGTTTTCGC........................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................................CAAACGCCAGGGAAAAACAGGA...................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................ACAATTCGATTCGGCGGTTTTT........................................................................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................ACAACAATTCGATTCGGC............................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................TTCTTGTTGCTGTTGTTTTCGA........................................................................................................................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
......................................................................................................................................................................................................................................................................TTATTGTTGTTCTTGCTGTTAT.................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................CTTGTTGCTGTTGTTTTCGC........................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................GTTCTTGTTGCTGTTGTTTTTGC........................................................................................................................................................................ 23 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0
...........................................................................CGAAATCCAAAAAGAAAT................................................................................................................................................................................................................................................................................................................................................. 18 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................ATTGTTGTTCTTGCTGTTATA................................................................................................................................................. 21 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................CGCTTATTGTGGGTCTTGCTTTT.................................................................................................................................................... 23 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................TCGCTTATTGTGGGTCTTGCTTTT.................................................................................................................................................... 24 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................CTTATTGTGGGTCTTGCTGTT.................................................................................................................................................... 21 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................TTATTGTTGTTCTTGCTGTT.................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................TGCTGTTATTTTAGGTTATTGTT................................................................................................................................................................ 23 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................ATTGGATTCGGTGGTTTTT........................................................................................................................................................................................................................................................................ 19 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................TGTTACGGTTGTTCGCA................................................................................................................................. 17 2 12 0.17 2 0 0 0 0 0 1 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................................................TGCTGTTATTTTAGGTTATTGT................................................................................................................................................................. 22 3 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................................................................AAGCTGAGCAAAAGAAACC................... 19 2 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................CAAGACAGCAACAATT........................................................................................................................................................................................................................................................................................ 16 1 15 0.07 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................................GAAAAACTGGGAAGCTAAGC............................. 20 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................................GCCGTAAGCGCAAGGT............................................................................................................................................................................................................................................................................................................... 16 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................................TAGCCGTAAGCGCAAG................................................................................................................................................................................................................................................................................................................. 16 2 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................................................................................GCGGTTTTGGTTGTTAGCC.............................................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TCTAACAGTCCCTTGAAGTGAAGTAAATGCGAGGGTTTGTTTGCCGTTTCCATCGGAAAGTTTTCGCTTAATTTAGCTTTAGGTTTTTCTTTATCTTTATCTTAATCTTTTCGGTATTCGCGTTCAATTGCTCTGTTCTGTTGTTGTTAAGCTAAGCCGCCAAAAACAAAAAACGGTCACACACAAACACGATGCGACACTCACACGTAATCACACACAGGCCACGAGGACAACAACAACAAGAACAACGACAACAAAAGCGAATAACAACAAGAACGACAATAACAACGACAACAAGCGTTCCGTGTTATTGTGTCCGAGTATGTTAACGCTTATAAATCTTTTTCGTTTCGTATATGTATACACTGTTGTTTGCGGTCCCTTTTTGTCCTTTCGACTCGTTTCCTTTTGGTTTATTCTTTTGTTCGTT
************************************************************************************************************************************************************************(((((((((((..((..((.(((.......((..((((((((((.((....))))))))).......)))..)).......))).)).))..))))))))))).....................****************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 O002
Head
 SRR553487
NRT_0-2 hours eggs
.......................................................................................................................................................................................................................................................................................................................TGTGTCCGAGTATGTTAAC.................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................TGTTATTGTGTCCGAGTA........................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................CAGGCCACGAGGACAACAACA................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................GTGTTATTGTGTCCGAGTATGTTA...................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................................................................................................................TTATTGTGTCCGAGTATGTTA...................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................CTGTTGTTTGCGGTCC................................................. 16 0 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................TTCCGTGTTATTGTGTCCGAGT............................................................................................................ 22 0 1 1.00 1 0 0 0 0 1 0 0 0
.................................................................GCTTAATTTAGCTTTAGG........................................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0
.......................................................................................................................................AAATGTTGTTGTTAAGCTAAGCCG............................................................................................................................................................................................................................................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0 0
.................GTGAAGTAAATGCGAGGGTTT........................................................................................................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................CTGTTGGTTGCGGTCC................................................. 16 1 2 0.50 1 0 0 0 0 0 0 0 1
...............................................................................................................................................................................................................................................................................................................CCTGTTATTGAGTCCGAG............................................................................................................. 18 2 4 0.50 2 0 0 0 2 0 0 0 0
................................................................................................................................TGCTGTGTTCTGCTGTTGT........................................................................................................................................................................................................................................................................................... 19 2 3 0.33 1 0 1 0 0 0 0 0 0
................................................................................................................................................TGTTAAGCTAGGCCGCGA............................................................................................................................................................................................................................................................................ 18 2 3 0.33 1 1 0 0 0 0 0 0 0
.......................TTTATGCGAGGGTTTGTTT.................................................................................................................................................................................................................................................................................................................................................................................................... 19 2 7 0.29 2 0 0 0 0 2 0 0 0
...........................................................................................................................TCAATTGCTACGTTCTGTT................................................................................................................................................................................................................................................................................................ 19 2 4 0.25 1 0 0 0 1 0 0 0 0
..........................................................................AGGGTTAGGTTTTTCTTTATTTTT............................................................................................................................................................................................................................................................................................................................................ 24 3 5 0.20 1 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................................................................................................................................................................................CTGTTGGTTGCGGTC.................................................. 15 1 17 0.12 2 2 0 0 0 0 0 0 0
.................................................CCATCATAAAGTTGTCGCT.......................................................................................................................................................................................................................................................................................................................................................................... 19 3 12 0.08 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................CGTATATGTATACAC................................................................ 15 0 12 0.08 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................CTGTTGGTTGCGGTCCG................................................ 17 2 18 0.06 1 0 0 0 1 0 0 0 0
......................................................................................................................................GTTCTGTTGATGTTA......................................................................................................................................................................................................................................................................................... 15 1 20 0.05 1 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:5793141-5793570 - dsi_23541 AGAT------------TGTCAGGGAACTTCACTTCATTTACGCTCCCAAA---------------C-AAACGGCAAAG---GT--A---------------------G--CCT--TTC-AAAAGCGAATT-AAA----------------------------------------TCGAAATC------------------CAAAAAGAAATAGAAATAGAATTAGAAAAGCCATAAGCGC-A-----AG-------------------------TTAA-----CGAGACAAGA-CAACAACAATTCGA--T----------------------TCGGCGGTTTTT------G---TT-T--TTTGCCAGTGTGTGTTTGTGCTACG-------CTG----------------------------TGAGTG---------------------TGCATTAGTG-----------TGTG--T------CCGGT------------------------------------------GCTCCTGTTGTTGTTGTTCTTGTTGCTGTTGTTTTCGCTTATTGTTGTTCTTGCTGTTATT--GTTGCTGTTG-----------------TT-----CGCAAGGCAC-----------------------------AA-TAA----------------------CAC-----------AG---------------------G--CTCAT---------ACAATTGCG--AAT-ATTTAGAAAAAG------------------------------CAAAGCATAT------------ACATATGT------------GA----------------CAACA-AACGCCAGGGAA----------------------------------AA-ACAGGAAAGCTG---------AGCAAAGGAAAACCA---------------------------------------A----ATAAGAAAA-CAAGCAA
droSec2 scaffold_4:608754-609178 + AGAT------------TGTCAGGGAACTTGACTTCATTTACGCTCCCAAA---------------C-AAACGGCAAAG---GT--A---------------------G--CCT--TTC-AAAAACGAATT-AAA----------------------------------------TCGAAATC------------------CA------AATAGAAATAGAATTAGAAAAGCCATAAGCGC-A-----AG-------------------------TTAA-----CGAGACAAGA-CAACAACAATTCGA--T----------------------TCGGCGGTTTTT------G---TTTT--TTTGCCAGTGTGTGTTTGTGCTACG-------CTG----------------------------TGAGTG---------------------TGCATTAGTG-----------TGTG--T------CCGGT------------------------------------------GCTCCTGTTGTTGTTGTTCTTGTTGCTGTTGTTGTCGCTTATTGTTGTTCTTGCTGTTATT--GTTGCTGTTG-----------------TT-----CGCAAGGCAC-----------------------------AA-TAA----------------------CAC-----------AG---------------------G--CTCAT---------ACAATTGCG--AAT-ATTTAGAAAAAG------------------------------CAAAGCATAT------------ACATATGT------------GA----------------CAACA-AACGCCAGGGAA----------------------------------AA-ACAGGAAAGCTG---------AGCAAAGGAAAACCA---------------------------------------A----ATAAGAAAA-CAAGCAA
dm3 chrX:6160660-6161086 - AGAT------------TGTCAGGGAACTTCACTTCATTTACGCTCCCAAA---------------C-AAACGGCAAAG---GT--A---------------------G--CAT--TTCCAAAAACGAATT-AAA----------------------------------------TCGAAATC------------------CAAATAGAAATAGAAGTAGAATTAGAAAAGCCATAAGCGC-A-----AG-------------------------TTAA-----CGAGACAAGA-CAACAACAATTCGA--T----------------------TCGGCGGTTTTT------G---TTTT--TTTGCCAGTGTGTGTTTGTGCTACG-------CTG----------------------------TGAGTG---------------------TGCATTA---------------GTG--T------CCGGT------------------------------------------GCTCCTGTTGT---TGTTCTTGTTGCTGTTGTTGTCGCTTATTGTTGTTCTTGCTGTTATT--GTTGCTGTTG-----------------TT-----CGCAAGGCAC-----------------------------AA-TAA----------------------CAC-----------AG---------------------G--CTCAT---------ACAATTGCG--AAT-ATTTAGAAAAAG------------------------------CAAAGCATAT------------ACATATGT------------GA----------------CAACA-AACGCCAAGGAA----------------------------------AA-ACTGGAAAGCTA---------AGCAAAGGAAAACCA---------------------------------------A--GAAAAAGAAAA-CAAACAA
droEre2 scaffold_4690:15130981-15131422 - AGTT------------TGTCAGGGAACTTCACTTTATAAACGC--------------------TCCGAAGCGACAAAA---GT--A---------------------G--CAT--TTCTCAATACGAATTAAAA----------------------------------------TCGAAATCCTACGCCAAATTCATATTCA------AATAGAAATTGAAATAGAAAACCCATAAGCCG-A-----AG-------------------------TTAA-----CGAGACGAGC-CAACAACAATTCGA--T----------------------TCGGCGGTTT--------TTTGTT-T--TTTGCCAGTGTGTGTTTGTGTTACG-------CTG----------------------------TGAGTGTGCATTACGTGCATTAGTGT-----------------------GTG--TGGCGG-CCGGT------------------------------------------GCTCCTGTTGT---TGTTCTTGCTGCTGTCGTTGTCGCCTATTGTTGTTCTTGCTGTTGTT--G---T---TG--------------TTGCT-----CGCAAGGCAC-----------------------------AA-AAA--C--AGAAGCACACACGGAAAC--ACAC--AAC----ACGCAG-GTC-----------G--CTCAC---------ACA---------------------------------------------------------AGCA----------------TATATGT------------GA----------------CAACA-AACGCCAGCGAA----------------------------------AA-AACAGAAATCTGAG-------AGCAAAGGAAA------------------------------------------------------TAA-AAAACAA
droYak3 X:2164749-2165213 - AGTT------------TGTCAGGGAACTTCATTTCATTTACGC--------------------TCCGAAGCGGCAAAA---GT--A---------------------G--GAT--TTCCAAAAACGAATA-AAA----------------------------------------TCTAAATT------CAAATTCAAATCCA------AATAGAAATAGAAATATAAGAGCCATAAGCTG-A-----AG-------------------------TTAA-----CGAGACGAGA-C---AACAATTCGA--T----------------------TCAGCGGTTTTT------G---TTTTTTTTTGCCAGTGTGTGTTTGTGCTACG-------CTG----------------------------TGAGTGTGCATTACGTGCATTAGTGTA---------------------TGTG--T------CCAGT------------------------------------------GCTCCTGTTGT------TCTTGTTGCTGTTGTTATAGTTTATTGTTGTTCTTGCTGTTCTT--GTTGTTGTTG--------------CTGCT-----CGCAAGGCAC-----------------------------AA-AAA--CATAGAAACACACAGACAATC--ACAC--AAC----ACGCAG-ATC-----------G--TTCAC---------ACAATTGCG--AAT-ATTTAGAA-AAG------------------------------CAAAGCA----------------TATATGT------------GA----------------CAACAAAACGCCAGGGAA----------------------------------AA-ACTGAAAATCCG---------AGCAAAGGAGA--CAAA----------------------------------------------CCAAAAAAGCCAA
droEug1 scf7180000409033:491305-491701 - ATTT------------TCTCAGT-AACTT----------------------------CTTTCTTCAGAAGCGGCAAAA---AA--A---------------------G--CAT--ATACAAAAGC---------------------------------------AA-TAA--AATAGA----------------------------------------------------------GCGTTA-----GG-------------------------TTAA-----C-----AAGA-CAACAACAATTCGA--T----------------------TCGGCGGTTT--------G---TT-T--TTTGACAGTGTGTGCCTCTG---TG-------CTGTG--TGTGTGTTTTTGTACGTTCCGTTG---------------TGCGA--GTGTGTGTG------TGTGAACCGC-----------GGTCCGGT------------------------------------------ACTCCTGTTGT------TCTAGTTGCTGTTGTT----------------------------GT--------TG--------------CTGTT-----TCCAAGGCAC-----------------------------AA-AAAA-CA-------AGACACGAAAACAC-----------AGGCGCAG-GTCGCATGCAAAAGTCGCTCAC---------ACAATTGCG--AAT-ATTTAGAA--AG-----CATATATAAACT------ACGAA------A------CATATATATACATATATGT------------GA----------------CAACA-AACGCCAAGAAA----------------------------------AAAACTGGAAAGCCG---------AGCAA----------------------------------------------------------------AAAACAA
droBia1 scf7180000302421:953966-954319 - GGTT------------CTCCAGCAAACACCAAGCA---------------------CCTTCCTTCCG-AGCGGCAAAC---AA---GCAG------------ATGAAG--CACATAG-CCAAAGC---------------------------------------AA-TAA--AGTAGA----------------------------------------------------------GCGCTA-----AG-------------------------TTA-------GAGACAACAACAACAGCGATTCAATAT----------------------TCGGCGGTTT--------G---TT-T--TTTGCCAGTGTGTGTGTGT------------------------------------------TG---------------TGCGA--GAGTGTGTGTGA---------CCGC-----------GGACCGGC------------------------------------------GCTCCAGTTGT------TCCTGTTGTTGTT-------------------------------GT--------GG--------------CTGCT-----C-CAAGA--------------------------------------------------------------------------AG---------------------G--CTCAC---------CCAGTCGCG--AAT-TTTTGGCA-GGG-----CATATATACACCG---AAAGGAA------A----CACATCCCCATACATATATGT------------GA----------------CAACA-AACGCCAGGGGA----------------------------------AA-ACTGGAAAGGAA---------CGGAAAGGAAAGCCGAG-------------------------------------------------CG-AAAACAA
droTak1 scf7180000414425:176968-177305 - GGAA------CGGTTTCTCCAGTAAACAACACACAACT----------TAAACACT-CTCCCTTTCGAGGCGGCACGA---AT--A---------------------G--CAT--AGC-AAATACAACCT-G----------------------------------------CATAGA----------------------------------------------------------------------------------------------------------GAGACACAA-CAACAACAATTCAATAT----------------------TCGGCGGTTT--------G---TT-T--TTTGCCAGTGTGTGTGTGAGT-------------GT-----------------------GTTG---------------TGCGA--GTGTGTG--------TATGAGCCGC-----------GGCCCGGT------------------------------------------GCTCCGGTTGTT---------GTTGTTGTT-------------------------------GT--------TG--------------CTGTT-----C-CAAGGAGC-----------------------------AG-AAAGA-------ACACATAAATAAAT--AT------------------------------------------------------------------------------------------A---------------CCAAAAATATACATATATATATATTTATGTGACAA-------GA----------------CAACA-AACGCCAGGGAA----------------------------------AA-ACTGGAAAG--------------GAAAGGAAAGCCGAG-------------------------------------------------CG-AAAACAA
droEle1 scf7180000490141:894895-895253 - AGAT---TTCCG---------T----CTTCTC-TCA------------TACTCACT-CTTCCTTTCGAAGCGGCAAAA---AT---ACGG------------GTGAAAA-AAAATAG-TCAAA----------------------------------------------------------------------------------------------------------------------A-----AA-------------------------TTAA-----CTA---AGGA-CAACAACAA-------T----------------------TCGGCGGTTC--------G---TT-T--TTTGCCAGTGTGTGTGCG----------------GTG--TG--TG-------------TG---TGTGTGCGTA----GTGCGA--GAGTGT---------------------GT-------GGACCGGT------------------------------------------GCTCCTGTTTTT---------GTTGTTG-T-------------------------------GT--------TG--------------CTGTT-----TCCAAGACAC-----------------------------AA-AACAC-------GCA----------T-----------ACAAACGCAGGGTCGCATGCAAGAGACTCGCAC---------ACAATTGCG--AAT-ATTAAGTAAAAA-----------------------------------------CATATACACAAATATATGT------------GA----------------CAACA-AACGCCAGGGAA----------------------------------AA-ACTAAAAAGCGG---------AGAAA------AACA---------------------------------------ATTGAGAAATAAAA-TCAGCAG
droRho1 scf7180000779986:850608-850924 + TTTC------CG---------ATAATC--------A------------TAATCATTCCTTCCTTCCAAAGCGGCGAAA---AA--TACG------------------AA-AAAATAA-TCAAA---------------------------------------------------T---AAT------------------------------------------------------------------------------------------------------CTA---AAGA-CAACAACAA-------T----------------------TCGGCGGTTC--------G---TT-T--TTTGCCAGTGTGTGTGAGTGT-----------ATG----------------------------TGAGCGCGCAG----TGCGA--GTGTGT-----------------------G--T---GGACCGGT------------------------------------------GCTCCTGTTCTT---------GT------T-------------------------------GT--------TG--------------CTGTT-----TCCAAGACTC-----------------------------AA-AAA----------------------CACAC-------ACTAACGCAGGGTCGCATGCAAGAGACTCGCAC---------ACAATTGCG--AAT-ATTAAGTAAAAA-----------------------------------------CATATATACATATATATGT------------GA----------------CAACA-AACGCCAGGGAA----------------------------------AA-ACTGGAAAGCGG---------AGA------------------------------------------------------------------AAAACAA
droFic1 scf7180000454072:1211091-1211398 + CGGCAGTTTCCG---------TT--------------------TCCCGAA--CTCTCATTCATTCCGAAGCGGCGAAA---AA--A---------------------A--ACT--AAAATAAACC---------------------------------------CA-TTA--AACAGA----------------------------------------------------------GTGCTA----------------------------------------------AAGGA-CAACAACGA-------T----------------------TCGGCGGTAC--------A---TT-T--TTTGCCAGTGTGTGCTTGTGT---------------------------------------------GTG---------------------TGTGTTCG--TGTGAACCGC-----------GGTCCGGT------------------------------------------GCTCCTGTTGT------------------T-------------------------------GT--------TG--------------CTGTT-----TCCAAGCCAC-----------------------------AA-GAAAA-------ACA----------CAC-----------AGGCGCAGGGTCGCATGCAA----------------------------G--AAT-ATTTGGTT-AAG-----CACATA-----------A----A------A------CAT---CGTACCTATATGT------------GA----------------CAACA-AACGCCAGGGAA----------------------------------AA-ACTGTAAAGCGG---------A----------------------------------------------------------------AAG-AAAATAA
droKik1 scf7180000302698:455532-455945 + ATAC------------TGT--------TTTCCCCCA---------------------TTTCCTTTCGAGGCGGCATAACGGATA---GAG------------GTGAAAAGAGAAAAG-TT-----------G-----------------------AAAAA--------------TATAAATT------A----------------------------------------------------AAACTGAATTGAAGCGAGGAA----------------------AATACAAAA-CAACAGCAATACGA--CCGACACTTACTACAATAAAACAACAGCGGTTT--------GTTATTTT--TTTTCCAGTGTGCTCTTGTG---------------------------------------------AGTG---------------------T---------------------GTG--AACCGT-ACGGT--------GTTCTTTTT-------TTCGCGGCGCGGTGCGGCT------------------CTGTTGTTGTT-------------------------------GT--------TG--------------CTGCC-----T-CAAATCGC-----------------------------AC-ACCGACACCGAAAAACACACACACAC--ACATATAATACAATTGCAGTGTCGTATCGAAGG--------------------------G--AAT-AAAAAGAAAAAT------------------------------ATAAATAAAT------------TAATGTGT------------GA----------------CAACA-AACGCCAAGCTA----------------------------------AC-GCTCGA-GTCTGAAATAAAAACGGAAC--------------------------------------------------------GGAAAG-CCAGCAG
droAna3 scaffold_13417:827025-827393 - TAAT------------T----------------------------------------CTTCCTTCCAAAGCTGCTTATCGAATAA-GCAAACCAAGCAAT--------------AAT-AC-AAAAAAATA-AAATATTAAAAAAAAACCGAAATTAAAAGAACACCACC-ACCAT----------------------------------------ATAGC-ATATAAAAGCGAGCAGCGG-A-----GT-CGA-----AGAAAACGCATAAAATTCGACAAGT-----GAAGA-AAAC-ACAA-------T----------------------TCGGCGGCGTTTAGGTTCC---TT-T--TTTTTTGTTGTTTTTTAT---TTTT-------ATG----------------------------TGAGTG---------------------TGTGCCAACA----TATCGCGTGTG--T--------------GCT--GTTTT--TT-------TTGGCGGTGCGGT------------------------------------------------------------GTTATT--GTTGTTGTTG-----------------CTCGAT-CGCATC-C-----------A------------------CCC-GGCA---------------------------------------------------------------TAT---------ATACTGGGA--TAT-AGTTCGA-----------------------------------------------------------------------------GG----------------CAACA-A---------------------------------------------------GGACAAGCG---------AGAAAAAAAAA---A---------------------------------------A----AT--------AAGAGAA
droBip1 scf7180000396362:363999-364425 + CTGC--------------------------ATTTTATT-------------------CTTCCTTCCAAAGCTGCTTATTCAATAA-GCTA----AGCGATATATAAAAACAAAAAAA-TC-----------A-----------------------AAAAGAACACA-CCGTGCGTAGA--GC------A----------------------------------------------------AAACTATATCAAAGACTAGAAAACGCATAAAATTCGACAAGT-----GA--------AACAA-------T----------------------TTGGCGGCGTTTA-----GTTATT-T--TTTTTTCGTTTTTGTTTTTAAT------------G----------------------------TGAG---------------A--GAGTGTGTG------CCTAAATCGCGTGTG--T------GCTGTTTTCTT--TTTTT--TTTTGTCATTTGGCGGTGCGGT-----------------------------GTTGTT---------------------------------GT------TG--------------CGGCTTGTT-TCCATTCCACTATCCATCCACTCGGTAGGAGTGGACAACCC-GGCA------------------------------------T----TC-A-----------------TCGT---------ATGAC-GCC--GAT-ATATG--C-AAGCAGGACATTTATATAGCACAAAA----A------G------GAT---A--------ATCT------------AA----------------CA--A-AACTCTA--TAA----------------------------------AA-GCTTAAAAA------------------------CCA---------------------------------------A----AAAAAAAAA-AAAAAAA
dp5 XL_group1e:10330466-10330763 - T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGGCCGTTC--------GTTTTTTT--TTGGCCAAAGTGATTGAGGGA-----------GAGTGAATG--TG--------------------TGTG------------------------------------------TGTG--T------CTCGCTCTCGG--GTTCG--TT-------TCCGCGGCGTGCT--------------------------------GT---------TTG------------------TT--GT------TGCACATAATTCCCTGCTGTTCTGCTC-CAAA---------------------------------------------------------------------------------------------------TTCGCATCCAATCCAGAGAATAGCG--TAT-ATA----------------------------------------------------TATATATATATGTATATGACAACTTTCATGACGACAAACAACAAATTCATCA-AACGCCGAGCGAACAACAACAGAAGCAGCA---------------------------------------------------GTCGAGTGAAAACGGAGAGAAGAATTTCTCATTGAAGCCGGAA----------AAAA-AGAAAAG
droPer2 scaffold_69:189974-190297 + AAAA------------AAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGA-AAATAACTAACTA---T---------------------TCCGGCCGTTG--------G---TT-TTTTTGGCCAAAGTGATTGAGGGA-----------GAGTGAATG--TG--------------------TGTG------------------------------------------TGTG--T------CTCGCTCTCGG--GTTCG--TT-------TCCGCGGCGTGCT--------------------------------GT---------TTG------------------TT--GT------TGCACATAATTCCCTGCTGCTCTGCTC-CAAA---------------------------------------------------------------------------------------------------TTCCCATCCAATCCAGAGAATAGCG--TAT-ATA--------------------------------------------------TATATATATATATGTATATGACAACTTTCATGACGACAAACAACAAATTCATCA-AACGCCGAGCGAACAACAACAGAAGCAGCA---------------------------------------------------GTCGAGTGAAAACGGAGAAAAGAATTTCTCATTGAAGCCGGAA----------AAAA-AGAAAAG
droWil2 scf2_1100000004540:850577-850782 + CTGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------------------GCTCCTGCTGC---TGCTGTTGTTGTTGTTGTTGTTGTGTATTGTTGATTTAGTTGTTGTT--GTTGTTGTTG-----------------TT-----GTCATTGCTT----------------------------TGCCTAA----------------------TGC-----------GT---------------------G--CTCAA----G----ACGACTATCTAAATGGTTTAGTCTAAG----------------------A----AAGT---AGTTGT------------TCAAATGT------------TG----------------CTACA-TCTGCGAGGAAA---------------------AGATAACG---AAAA---------------------------AGATAAACCA---------------------------------------G---AG-AA--ACA-AAAATGA
droVir3 scaffold_13047:14589985-14590137 - TTGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTGTT------G---TTCA--ATTTCAAT--TATGTTTGT--TGCGCAATGCGTTG----------------------------AAATTG-----------------------------CG-----------CGTACTT------TTTGCT-----A--------------------------------------TTTGCTGTTGTTGTTGTTGTTGTTGTTGTTGATG-TTGTTGTTGATGTTGCTGTTGCT--GTTGCTGTTG-----------------TT-----AGCTGGCCAA-----------------------------AA-TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6473:3299065-3299243 - TGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGTTT--------G---TT-T--GTT---------------------------------------------------------------------------------------------------------------------------TGCT-----CA---------TT-----------------------GTTATTGTTGT------TGTTGTTGTTGTT---------------------------------------GTTG--------------CTGCCTAGT-CGCAACGCATTT---------------------------------------------------------C-----------AA---------------------A------C---------TCAATTATT--ATA-ATTGGCAAGAAG------------------------------CGACGCTGA--------------------T------------GA----------------CAACA-ACAGC------------------AGCAACAACAAGAAACCCTGCCAAA---------------------------ACTGAAACCA---------------------------------------A---AGCAAAAAAA-AAAAAAG
droGri2 scaffold_14853:5530258-5530406 + CAAT------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------G---TT-T--TTGAAT--TCTGTGTTCGA---------------------------------TCGGTCCGACGTGAAAG-----------------CGAGAG-------------------TGTT--G------CCGGT------------------------------------------GCCACAGTTGCTGTTGTTGTTGTTGCTGTAGCTGTTGCTGA-TGGTGTGTTTGCTGTTGG-----------TG--------------CTG-----TCC-CAGT-T-----------A------------------CGCGCCA----------------------AGC-----------AT---------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGAT------------TGTCAGGGAACTTCACTTCATTTACGCTCCCAAA---------------C-AAACGGCAAAG---GT--A---------------------G--CCT--TTC-AAAAGCGAATT-AAA----------------------------------------TCGAAATC------------------CAAAAAGAAATAGAAATAGAATTAGAAAAGCCATAAGCGC-A-----AG-------------------------TTAA-----CGAGACAAGA-CAACAACAATTCGA--T----------------------TCGGCGGTTTTT------G---TT-T--TTTGCCAGTGTGTGTTTGTGCTACG-------CTG----------------------------TGAGTG---------------------TGCATTAGTG-----------TGTG--T------CCGGT------------------------------------------GCTCCTGTTGTTGTTGTTCTTGTTGCTGTTGTTTTCGCTTATTGTTGTTCTTGCTGTTATT--GTTGCTGTTG-----------------TT-----CGCAAGGCAC-----------------------------AA-TAA----------------------CAC-----------AG---------------------G--CTCAT---------ACAATTGCG--AAT-ATTTAGAAAAAG------------------------------CAAAGCATAT------------ACATATGT------------GA----------------CAACA-AACGCCAGGGAA----------------------------------AA-ACAGGAAAGCTG---------AGCAAAGGAAAACCA---------------------------------------A----ATAAGAAAA-CAAGCAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTGTTGCTGTTGTTTTCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.00502300000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTCTTGTTGCTGTTGTTTTCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00312000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGTTCTTGCTGTTATT--GTTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200110000000000000
....................................................................................................................................................................................................................................................................................................A-CAACAACAATTCGA--T----------------------TCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGTTGTTCTTGTTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1971.14800008000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTG-----------------TT-----CGCAAGGCAC-----------------------------AA-TAA----------------------CA.................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
...............................................................................................................................................................................CGAAATC------------------CAAAAAGAAATAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGCAC-----------------------------AA-TAA----------------------CAC-----------AG---------------------G--CTC........................................................................................................................................................................................................................................................................................2211.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT------------ACATATGT------------GA----------------CAACA-AACGCCAGGGG.......................................................................................................................................2911.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----CGCAAGGCAC-----------------------------AA-TAA----------------------CAC-----------AG---------------------G--CTCAT---------A............................................................................................................................................................................................................................................................................2811.00100000000000010000
...T------------TGTCAGGGAACTTCACTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
....................................TTTACGCTCCCAAA---------------C-AAACGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT------------ACATATGT------------GA----------------CAACA-AACGCCAGG.........................................................................................................................................2811.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................T-T--TTTGCCAGTGTGTGTTTGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TGTTTGTGCTACG-------CTG----------------------------TGAGTG---------------------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
..................................................................................................................................................................................................................................................................................................AGA-CAACAACAATTCGA--T----------------------TCGGCGGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
..........................................................................................................................................................................................................................................................................................................AACAATTCGA--T----------------------TCGGCGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCAC-----------------------------AA-TAA----------------------CAC-----------AG---------------------G--CTC........................................................................................................................................................................................................................................................................................2111.00100000000001000000
.....................................TTACGCTCCCAAA---------------C-AAACGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
........................................................................................................................................................................................................................................................................................................ACAACAATTCGA--T----------------------TCGGCGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTGTTGCTGTTGTTTTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
..........................................................................................................................................................................................................................................................................................................AACAATTCGA--T----------------------TCGGCGGTTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000010000
......................................................................................................................................................................................................................................................................................................CAACAACAATTCGA--T----------------------TCGGCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGT------------GA----------------CAACA-AACGC.............................................................................................................................................1811.00100100000000000000
...................................................................................................................................................................................................................................................................................................GA-CAACAACAATTCGA--T----------------------TCGGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001000000000000
..................................CATTTACGCTCCCAAA---------------C-AAACGGCAAAG---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
........................................................................................................................................................................................................................................................................................................ACAACAATTCGA--T----------------------TCGGCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------ACATATGT------------GA----------------CAACA-AACGCCAGGGA.......................................................................................................................................2711.00100000001000000000
...............................................................................................................................ATT-AAA----------------------------------------TCGAAATC------------------CAAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTATTGTTGTTCTTGCTGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGAAAGCTG---------AGCAAAGGA...................................................................2111.00110000000000000000
.............................................................................................................................................................................................................................................................................................................AATTCGA--T----------------------TCGGCGGTTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------CCGGT------------------------------------------GCTCCTGTTGTTGTTGTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
..........................................................................................................................................................................................................................................................................................................AACAATTCGA--T----------------------TCGGCGGTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................TGTGTTTGTGCTACG-------CTG----------------------------TGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
.................................................................................................................................T-AAA----------------------------------------TCGAAATC------------------CAAAAAGAAATAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCTTGTTGCTGTTGTTTTCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-AACGCCAGGGAA----------------------------------AA-ACAGGA...........................................................................................2211.00100000000000100000
...........................................................................................................................................................................................................................................................................................................ACAATTCGA--T----------------------TCGGCGGTTTTT------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
........................................................................................................................................................................................................................................................................................................ACAACAATTCGA--T----------------------TCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGTTGCTGTTGTTTTCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTGTTGTTCTTGCTGTTAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTTGCTGTTGTTTTCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
...............................................................................................................................................................................CGAAATC------------------CAAAAAGAAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50100010000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTGTTCTTGCTGTTATA--........................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTGTTGTTCTTGCTGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2030.33100100000000000000
droSec2
AGAT------------TGTCAGGGAACTTGACTTCATTTACGCTCCCAAA---------------C-AAACGGCAAAG---GT--A---------------------G--CCT--TTC-AAAAACGAATT-AAA----------------------------------------TCGAAATC------------------CA------AATAGAAATAGAATTAGAAAAGCCATAAGCGC-A-----AG-------------------------TTAA-----CGAGACAAGA-CAACAACAATTCGA--T----------------------TCGGCGGTTTTT------G---TTTT--TTTGCCAGTGTGTGTTTGTGCTACG-------CTG----------------------------TGAGTG---------------------TGCATTAGTG-----------TGTG--T------CCGGT------------------------------------------GCTCCTGTTGTTGTTGTTCTTGTTGCTGTTGTTGTCGCTTATTGTTGTTCTTGCTGTTATT--GTTGCTGTTG-----------------TT-----CGCAAGGCAC-----------------------------AA-TAA----------------------CAC-----------AG---------------------G--CTCAT---------ACAATTGCG--AAT-ATTTAGAAAAAG------------------------------CAAAGCATAT------------ACATATGT------------GA----------------CAACA-AACGCCAGGGAA----------------------------------AA-ACAGGAAAGCTG---------AGCAAAGGAAAACCA---------------------------------------A----ATAAGAAAA-CAAGCAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTGTTGCTGTTGTTGTCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030120
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTGTTGCTGTTGTTGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020020
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----CGCAAGGCAC-----------------------------AA-TAA----------------------CAC-----------AG---------------------G--...........................................................................................................................................................................................................................................................................................2311.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTGTTGTTCTTGTTGCTGTTGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-ACAGGAAAGCTG---------AGCAAAGGA...................................................................2211.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------AA-ACAGGAAAGCTG---------AGCAAAGG....................................................................2311.0010010
..............................................CAAA---------------C-AAACGGCAAAG---GT--A---------------------G--C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA----------------------------------AA-ACAGGAAAGCTG---------AGC.........................................................................2011.0010100
......................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGCTACG-------CTG----------------------------TGAGTG---------------------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-ATTTAGAAAAAG------------------------------CAAAGC..............................................................................................................................................................................................................2011.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------ACATATGT------------GA----------------CAACA-AACGCCAG..........................................................................................................................................2411.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTGTTGCTGTTGTTGTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.........................................................................................................................................................................................................................................................................................................................................................................TTTGCCAGTGTGTGTTTGTGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--GTTGCTGTTG-----------------TT-----CGCAAGGC..............................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGCTTATTGTTGTTCTTGCTGTTAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-ACAGGAAAGCTG---------AGCAAAGGAAAACC..............................................................2711.0010100
.........................................................................................................................................................................................................................................................................................................................................................................................TGTGCTACG-------CTG----------------------------TGAGTG---------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
...............................................................................................................................................................................................................................................................................................................................................................G---TTTT--TTTGCCAGTGTGTGTTTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
......................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGCTACG-------CTG----------------------------TGAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCTTGTTGCTGTTGTTGTCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-ATTTAGAAAAAG------------------------------CAAAGC..............................................................................................................................................................................................................1911.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------AA-ACAGGAAAGCTG---------AGC.........................................................................1811.0010010
......................................................................................................................................................................................................................................................................................................................................................................T--TTTGCCAGTGTGTGTTTGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC-----------AG---------------------G--CTCAT---------ACAATTGC.....................................................................................................................................................................................................................................................................1911.0011000
................................................AA---------------C-AAACGGCAAAG---GT--A---------------------G--CCT--........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC-----------AG---------------------G--CTCAT---------ACAATTGCG--A.................................................................................................................................................................................................................................................................2111.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAGGAAAACCA---------------------------------------A----ATAAGA...........2111.0010010
............................................................................................................................................................................................................................................................................................................................................................................................GCTACG-------CTG----------------------------TGAGTG---------------------TGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
dm3
AGAT------------TGTCAGGGAACTTCACTTCATTTACGCTCCCAAA---------------C-AAACGGCAAAG---GT--A---------------------G--CAT--TTCCAAAAACGAATT-AAA----------------------------------------TCGAAATC------------------CAAATAGAAATAGAAGTAGAATTAGAAAAGCCATAAGCGC-A-----AG-------------------------TTAA-----CGAGACAAGA-CAACAACAATTCGA--T----------------------TCGGCGGTTTTT------G---TTTT--TTTGCCAGTGTGTGTTTGTGCTACG-------CTG----------------------------TGAGTG---------------------TGCATTA---------------GTG--T------CCGGT------------------------------------------GCTCCTGTTGT---TGTTCTTGTTGCTGTTGTTGTCGCTTATTGTTGTTCTTGCTGTTATT--GTTGCTGTTG-----------------TT-----CGCAAGGCAC-----------------------------AA-TAA----------------------CAC-----------AG---------------------G--CTCAT---------ACAATTGCG--AAT-ATTTAGAAAAAG------------------------------CAAAGCATAT------------ACATATGT------------GA----------------CAACA-AACGCCAAGGAA----------------------------------AA-ACTGGAAAGCTA---------AGCAAAGGAAAACCA---------------------------------------A--GAAAAAGAAAA-CAAACAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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............................................CCCAAA---------------C-AAACGGCAAAG---GT--A---------------------G--CAT--T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGT---TGTTCTTGTTGCTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2141.0040000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGCTGTTATT--GTTGCTGTTG-----------------TT-----C.....................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-AACGCCAAGGAA----------------------------------AA-ACTGGAAAG........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAAAACCA---------------------------------------A--GAAAAAGAAAA-CA.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAAAACCA---------------------------------------A--GAAAAAGA...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................TGTCAGGGAACTTCACTTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CTG----------------------------TGAGTG---------------------TGCATTA---------------GTG--T------CCGGT------------------------------------------GC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................AGTGTGTGTTTGTGCTACG-------CT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTGTCGCTTATTGTTGTTCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ATTTACGCTCCCAAA---------------C-AAACGGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TCGAAATC------------------CAAATAGAAATAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------TGCATTA---------------GTG--T------CCGGT------------------------------------------GCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG--T------CCGGT------------------------------------------GCTCCTGTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTA---------AGCAAAGGAAAACCA---------------------------------------A--GAAA...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATGT------------GA----------------CAACA-AACG..............................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TTGTGCTACG-------CTG----------------------------TGAGTG---------------------TG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGTTGTTGTCGCTTATTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CTG----------------------------TGAGTG---------------------TGCATTA---------------GTG--T------CCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTGTTCTTGCTGTTATT--........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GTAGAATTAGAAAAGCCATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AACAATTCGA--T----------------------TCGGCGGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGT---TGTTCTTGTTGCTGTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2131.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000020000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TGCTACG-------CTG----------------------------TGAGTG---------------------TGCATTA---------------GTG--.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................GT--A---------------------G--CAT--TTCCAAAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA---------AGCAAAGGAAAACCA---------------------------------------A--GAAAAAGAA..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCTTATTGTTGTTCTTGCTGTTAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTA---------AGCAAAGGAAAACCA---------------------------------------A--GAA................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTA---------------GTG--T------CCGGT------------------------------------------GCTCCTGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................GAGACAAGA-CAACAACAATTCGA--T----------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TCAGGGAACTTCACTTCATTTACGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTATTGTTGTTCTTGCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTTATTGTTGTTCTTGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA-AACGCCAAGGAA----------------------------------AA-ACTG.............................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGGAA----------------------------------AA-ACTGGAAAGCTA---------AG..........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TCACTTCATTTACGCTCCCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................GAAGTAGAATTAGAAAAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGT------------------------------------------GCTCCTGTTGT---TGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................AAACGGCAAAG---GT--A---------------------G--CAT--TTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT--GTTGCTGTTG-----------------TT-----CGC...................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACCA---------------------------------------A--GAAAAAGAAAA-C......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTTTGTGCTACG-------CTG----------------------------TGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................AGTAGAATTAGAAAAGCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCTGTTGT---TGTTCTTGTTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGTT------------TGTCAGGGAACTTCACTTTATAAACGC--------------------TCCGAAGCGACAAAA---GT--A---------------------G--CAT--TTCTCAATACGAATTAAAA----------------------------------------TCGAAATCCTACGCCAAATTCATATTCA------AATAGAAATTGAAATAGAAAACCCATAAGCCG-A-----AG-------------------------TTAA-----CGAGACGAGC-CAACAACAATTCGA--T----------------------TCGGCGGTTT--------TTTGTT-T--TTTGCCAGTGTGTGTTTGTGTTACG-------CTG----------------------------TGAGTGTGCATTACGTGCATTAGTGT-----------------------GTG--TGGCGG-CCGGT------------------------------------------GCTCCTGTTGT---TGTTCTTGCTGCTGTCGTTGTCGCCTATTGTTGTTCTTGCTGTTGTT--G---T---TG--------------TTGCT-----CGCAAGGCAC-----------------------------AA-AAA--C--AGAAGCACACACGGAAAC--ACAC--AAC----ACGCAG-GTC-----------G--CTCAC---------ACA---------------------------------------------------------AGCA----------------TATATGT------------GA----------------CAACA-AACGCCAGCGAA----------------------------------AA-AACAGAAATCTGAG-------AGCAAAGGAAA------------------------------------------------------TAA-AAAACAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACGTGCATTAGTGT-----------------------GTG--TGGCGG-C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020100100
............................................................................................................................................................................................................................................................................................................................................................................................GTTACG-------CTG----------------------------TGAGTGTGCATTACGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0021000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA----------------------------------AA-AACAGAAATCTGAG-------AG..........................................................................2111.0010000100
..................................................................................................................................................................................................................................................................................................................................................................GTT-T--TTTGCCAGTGTGTGTTTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACACGGAAAC--ACAC--AAC----A..................................................................................................................................................................................................................................................................................................................2011.0010000100
....................................................................................................................................................................................................................................................................................................................................................................T-T--TTTGCCAGTGTGTGTTTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--C--AGAAGCACACACGGAAAC--ACAC--AAC----...................................................................................................................................................................................................................................................................................................................2811.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................CG-------CTG----------------------------TGAGTGTGCATTACGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTT--G---T---TG--------------TTGCT-----CGCAA.................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
.............................................................................................................................................................................................................................................................................................................AATTCGA--T----------------------TCGGCGGTTT--------TTTGTT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGTGT-----------------------GTG--TGGCGG-CC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010000
.........................................GC--------------------TCCGAAGCGACAAAA---GT--A---------------------G--.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................GTGTGTTTGTGTTACG-------CTG----------------------------TGAGTGTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------TATATGT------------GA----------------CAACA-AACGCCAGC.........................................................................................................................................2411.0010100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATCTGAG-------AGCAAAGGAA..................................................................2111.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA----------------------------------AA-AACAGAAATCTGAG-------AGC.........................................................................2211.0010100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACACGGAAAC--ACAC--AAC----ACGCA..............................................................................................................................................................................................................................................................................................................2411.0010001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AACAGAAATCTGAG-------AGCAAAG.....................................................................2211.0010100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACACACGGAAAC--ACAC--AAC----ACGCA..............................................................................................................................................................................................................................................................................................................2711.0010000100
......................................................................................................................................................................................................................................................................................................................................................................T--TTTGCCAGTGTGTGTTTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AACGCCAGCGAA----------------------------------AA-AACAGAAATCT......................................................................................2611.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGAAAC--ACAC--AAC----ACGCAG-GTC-----------G--CT.........................................................................................................................................................................................................................................................................................2811.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCT-----CGCAAGGCAC-----------------------------AA-AAA--C--AGAAGC..............................................................................................................................................................................................................................................................................................................................................2511.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATTAGTGT-----------------------GTG--TGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGTTACG-------CTG----------------------------TGAGTGTGCATTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
..........................................C--------------------TCCGAAGCGACAAAA---GT--A---------------------G--C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACACACGGAAAC--ACAC--AAC----AC.................................................................................................................................................................................................................................................................................................................2411.0010100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTT--G---T---TG--------------TTGCT-----CGCAAG................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
...............................................................................................................................................................................................................................................G-A-----AG-------------------------TTAA-----CGAGACGAGC-CAACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT---TGTTCTTGCTGCTGTCGTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
..................................................................................................................................................................................................................................AAACCCATAAGCCG-A-----AG-------------------------TTAA-----CGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGAAATCTGAG-------AGCAAAGGA...................................................................2311.0010000010
.........................................................................................................................................................................................................................................................................................................................................................................TTTGCCAGTGTGTGTTTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................TGTGTTACG-------CTG----------------------------TGAGTGTGCATTACGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATCTGAG-------AGCAAAGGA...................................................................1911.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGTTGTTCTTGCTGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010001000
droYak3
AGTT------------TGTCAGGGAACTTCATTTCATTTACGC--------------------TCCGAAGCGGCAAAA---GT--A---------------------G--GAT--TTCCAAAAACGAATA-AAA----------------------------------------TCTAAATT------CAAATTCAAATCCA------AATAGAAATAGAAATATAAGAGCCATAAGCTG-A-----AG-------------------------TTAA-----CGAGACGAGA-C---AACAATTCGA--T----------------------TCAGCGGTTTTT------G---TTTTTTTTTGCCAGTGTGTGTTTGTGCTACG-------CTG----------------------------TGAGTGTGCATTACGTGCATTAGTGTA---------------------TGTG--T------CCAGT------------------------------------------GCTCCTGTTGT------TCTTGTTGCTGTTGTTATAGTTTATTGTTGTTCTTGCTGTTCTT--GTTGTTGTTG--------------CTGCT-----CGCAAGGCAC-----------------------------AA-AAA--CATAGAAACACACAGACAATC--ACAC--AAC----ACGCAG-ATC-----------G--TTCAC---------ACAATTGCG--AAT-ATTTAGAA-AAG------------------------------CAAAGCA----------------TATATGT------------GA----------------CAACAAAACGCCAGGGAA----------------------------------AA-ACTGAAAATCCG---------AGCAAAGGAGA--CAAA----------------------------------------------CCAAAAAAGCCAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................AAA---GT--A---------------------G--GAT--TTCCAAAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000000000
......................................................................................................................................................................................................................................................................................................................................................................TTTTTTGCCAGTGTGTGTTTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
............................................................................AA---GT--A---------------------G--GAT--TTCCAAAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
......................................................................................................................................................................................................................................................................................................C---AACAATTCGA--T----------------------TCAGCGGTTTTT------G---T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.....................................................................................................................................................................................................................................GCCATAAGCTG-A-----AG-------------------------TTAA-----CGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------TATATGT------------GA----------------CAACAAAACGCCAGGGAA----------------------------------....................................................................................................2811.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------TATATGT------------GA----------------CAACAAAACGCCAGGGA.......................................................................................................................................2711.00110000000000
......................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGCTACG-------CTG----------------------------TGAGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCATTACGTGCATTAGTGTA---------------------TGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTCTT--GTTGTTGTTG--------------CTG.............................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA----------------CAACAAAACGCCAGGGA.......................................................................................................................................1911.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT-ATTTAGAA-AAG------------------------------CAAAGC..............................................................................................................................................................................................................2011.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTTTATTGTTGTTCTTGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................G----------------------------TGAGTGTGCATTACGTGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTG--------------CTGCT-----CGCAAGGCAC-----------------------------...............................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................TGTTTGTGCTACG-------CTG----------------------------TGAGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
.................................................................................................................................................................................................................ATAGAAATAGAAATATAAGAGCCATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTGTTGTTCTTGCTGTTCTT--GTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.............................CATTTCATTTACGC--------------------TCCGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTGTTG--------------CTGCT-----CGCAAG................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.................................................................................................................................................................................................................................AAGAGCCATAAGCTG-A-----AG-------------------------TTAA-----CGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................TTGTGCTACG-------CTG----------------------------TGAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000
......................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGCTACG-------CTG----------------------------TGAGTGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
......................................................................CGGCAAAA---GT--A---------------------G--GAT--TTCCAAAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC--AAC----ACGCAG-ATC-----------G--TTCAC---------ACAATT.......................................................................................................................................................................................................................................................................2711.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGTGTA---------------------TGTG--T------CCAGT------------------------------------------G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................................................................................................................................................................................ATTCGA--T----------------------TCAGCGGTTTTT------G---TTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGCTACG-------CTG----------------------------TGAGTGTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA----------------CAACAAAACGCCAGGGAA----------------------------------AA-ACTGA............................................................................................2711.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT------------GA----------------CAACAAAACGCCAGGGA.......................................................................................................................................2111.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................TTTTTTTGCCAGTGTGTGTTTGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
AGTT------------TGTCAGGGAACTTCATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.....................................................................................................................................................................................................................AAATAGAAATATAAGAGCCATAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAAACGCCAGGGAA----------------------------------A...................................................................................................1911.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC----ACGCAG-ATC-----------G--TTCAC---------ACAA.........................................................................................................................................................................................................................................................................2211.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACACAGACAATC--ACAC--AAC----ACGCA..............................................................................................................................................................................................................................................................................................................2711.00101000000000
...........................................................................................................................................................................................................................................................................................CGAGACGAGA-C---AACAATTCGA--T----------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
...........................................................................AAA---GT--A---------------------G--GAT--TTCCAAAAACGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAGAAACACACAGACAATC--................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA----------------CAACAAAACGCCAGGGAA----------------------------------....................................................................................................2011.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAGTGTA---------------------TGTG--T------CCAGT------------------------------------------G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCATTAGTGTA---------------------TGTG--T------CCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.............................................................................................................................................................................................................................ATATAAGAGCCATAAGCTG-A-----AG-------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
........................AACTTCATTTCATTTACGC--------------------TCCGAAGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
...................................ATTTACGC--------------------TCCGAAGCGGCAAAA---GT--A---------------------G--G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
............................................................................................................................................................................................................................AATATAAGAGCCATAAGCTG-A-----AG-------------------------T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
AGTT------------TGTCAGGGAACTTCATTTCATTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACAATC--ACAC--AAC----ACGCAG-............................................................................................................................................................................................................................................................................................................2111.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGTGCATTAGTGTA---------------------TGTG--T------CCAGT------------------------------------------G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
........................................................................................................................................................................................................................................ATAAGCTG-A-----AG-------------------------TTAA-----CGAGACGAGA-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.......................................................................................................................................................................................................................................CATAAGCTG-A-----AG-------------------------TTAA-----CGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................TGTGCTACG-------CTG----------------------------TGAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAG-ATC-----------G--TTCAC---------ACAATTGC.....................................................................................................................................................................................................................................................................2211.00110000000000
..............................................................................................................................................................................................................................................................................................GACGAGA-C---AACAATTCGA--T----------------------TCAGCGGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
.....................................................................GCGGCAAAA---GT--A---------------------G--GAT--TTCCAAAAACGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTCTTGCTGTTCTT--GTTGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGCTGTTCTT--GTTGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................1860.17100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGCTGTTCTT--GTTGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................18150.07100100000000
droEug1
ATTT------------TCTCAGT-AACTT----------------------------CTTTCTTCAGAAGCGGCAAAA---AA--A---------------------G--CAT--ATACAAAAGC---------------------------------------AA-TAA--AATAGA----------------------------------------------------------GCGTTA-----GG-------------------------TTAA-----C-----AAGA-CAACAACAATTCGA--T----------------------TCGGCGGTTT--------G---TT-T--TTTGACAGTGTGTGCCTCTG---TG-------CTGTG--TGTGTGTTTTTGTACGTTCCGTTG---------------TGCGA--GTGTGTGTG------TGTGAACCGC-----------GGTCCGGT------------------------------------------ACTCCTGTTGT------TCTAGTTGCTGTTGTT----------------------------GT--------TG--------------CTGTT-----TCCAAGGCAC-----------------------------AA-AAAA-CA-------AGACACGAAAACAC-----------AGGCGCAG-GTCGCATGCAAAAGTCGCTCAC---------ACAATTGCG--AAT-ATTTAGAA--AG-----CATATATAAACT------ACGAA------A------CATATATATACATATATGT------------GA----------------CAACA-AACGCCAAGAAA----------------------------------AAAACTGGAAAGCCG---------AGCAA----------------------------------------------------------------AAAACAASizeHit CountTotal NormTotal
No Reads
droBia1
GGTT------------CTCCAGCAAACACCAAGCA---------------------CCTTCCTTCCG-AGCGGCAAAC---AA---GCAG------------ATGAAG--CACATAG-CCAAAGC---------------------------------------AA-TAA--AGTAGA----------------------------------------------------------GCGCTA-----AG-------------------------TTA-------GAGACAACAACAACAGCGATTCAATAT----------------------TCGGCGGTTT--------G---TT-T--TTTGCCAGTGTGTGTGTGT------------------------------------------TG---------------TGCGA--GAGTGTGTGTGA---------CCGC-----------GGACCGGC------------------------------------------GCTCCAGTTGT------TCCTGTTGTTGTT-------------------------------GT--------GG--------------CTGCT-----C-CAAGA--------------------------------------------------------------------------AG---------------------G--CTCAC---------CCAGTCGCG--AAT-TTTTGGCA-GGG-----CATATATACACCG---AAAGGAA------A----CACATCCCCATACATATATGT------------GA----------------CAACA-AACGCCAGGGGA----------------------------------AA-ACTGGAAAGGAA---------CGGAAAGGAAAGCCGAG-------------------------------------------------CG-AAAACAASizeHit CountTotal NormTotal
No Reads
droTak1
GGAA------CGGTTTCTCCAGTAAACAACACACAACT----------TAAACACT-CTCCCTTTCGAGGCGGCACGA---AT--A---------------------G--CAT--AGC-AAATACAACCT-G----------------------------------------CATAGA----------------------------------------------------------------------------------------------------------GAGACACAA-CAACAACAATTCAATAT----------------------TCGGCGGTTT--------G---TT-T--TTTGCCAGTGTGTGTGTGAGT-------------GT-----------------------GTTG---------------TGCGA--GTGTGTG--------TATGAGCCGC-----------GGCCCGGT------------------------------------------GCTCCGGTTGTT---------GTTGTTGTT-------------------------------GT--------TG--------------CTGTT-----C-CAAGGAGC-----------------------------AG-AAAGA-------ACACATAAATAAAT--AT------------------------------------------------------------------------------------------A---------------CCAAAAATATACATATATATATATTTATGTGACAA-------GA----------------CAACA-AACGCCAGGGAA----------------------------------AA-ACTGGAAAG--------------GAAAGGAAAGCCGAG-------------------------------------------------CG-AAAACAASizeHit CountTotal NormTotal
No Reads
droEle1
AGAT---TTCCG---------T----CTTCTC-TCA------------TACTCACT-CTTCCTTTCGAAGCGGCAAAA---AT---ACGG------------GTGAAAA-AAAATAG-TCAAA----------------------------------------------------------------------------------------------------------------------A-----AA-------------------------TTAA-----CTA---AGGA-CAACAACAA-------T----------------------TCGGCGGTTC--------G---TT-T--TTTGCCAGTGTGTGTGCG----------------GTG--TG--TG-------------TG---TGTGTGCGTA----GTGCGA--GAGTGT---------------------GT-------GGACCGGT------------------------------------------GCTCCTGTTTTT---------GTTGTTG-T-------------------------------GT--------TG--------------CTGTT-----TCCAAGACAC-----------------------------AA-AACAC-------GCA----------T-----------ACAAACGCAGGGTCGCATGCAAGAGACTCGCAC---------ACAATTGCG--AAT-ATTAAGTAAAAA-----------------------------------------CATATACACAAATATATGT------------GA----------------CAACA-AACGCCAGGGAA----------------------------------AA-ACTAAAAAGCGG---------AGAAA------AACA---------------------------------------ATTGAGAAATAAAA-TCAGCAGSizeHit CountTotal NormTotal
No Reads
droRho1
TTTC------CG---------ATAATC--------A------------TAATCATTCCTTCCTTCCAAAGCGGCGAAA---AA--TACG------------------AA-AAAATAA-TCAAA---------------------------------------------------T---AAT------------------------------------------------------------------------------------------------------CTA---AAGA-CAACAACAA-------T----------------------TCGGCGGTTC--------G---TT-T--TTTGCCAGTGTGTGTGAGTGT-----------ATG----------------------------TGAGCGCGCAG----TGCGA--GTGTGT-----------------------G--T---GGACCGGT------------------------------------------GCTCCTGTTCTT---------GT------T-------------------------------GT--------TG--------------CTGTT-----TCCAAGACTC-----------------------------AA-AAA----------------------CACAC-------ACTAACGCAGGGTCGCATGCAAGAGACTCGCAC---------ACAATTGCG--AAT-ATTAAGTAAAAA-----------------------------------------CATATATACATATATATGT------------GA----------------CAACA-AACGCCAGGGAA----------------------------------AA-ACTGGAAAGCGG---------AGA------------------------------------------------------------------AAAACAASizeHit CountTotal NormTotal
No Reads
droFic1
CGGCAGTTTCCG---------TT--------------------TCCCGAA--CTCTCATTCATTCCGAAGCGGCGAAA---AA--A---------------------A--ACT--AAAATAAACC---------------------------------------CA-TTA--AACAGA----------------------------------------------------------GTGCTA----------------------------------------------AAGGA-CAACAACGA-------T----------------------TCGGCGGTAC--------A---TT-T--TTTGCCAGTGTGTGCTTGTGT---------------------------------------------GTG---------------------TGTGTTCG--TGTGAACCGC-----------GGTCCGGT------------------------------------------GCTCCTGTTGT------------------T-------------------------------GT--------TG--------------CTGTT-----TCCAAGCCAC-----------------------------AA-GAAAA-------ACA----------CAC-----------AGGCGCAGGGTCGCATGCAA----------------------------G--AAT-ATTTGGTT-AAG-----CACATA-----------A----A------A------CAT---CGTACCTATATGT------------GA----------------CAACA-AACGCCAGGGAA----------------------------------AA-ACTGTAAAGCGG---------A----------------------------------------------------------------AAG-AAAATAASizeHit CountTotal NormTotal
No Reads
droKik1
ATAC------------TGT--------TTTCCCCCA---------------------TTTCCTTTCGAGGCGGCATAACGGATA---GAG------------GTGAAAAGAGAAAAG-TT-----------G-----------------------AAAAA--------------TATAAATT------A----------------------------------------------------AAACTGAATTGAAGCGAGGAA----------------------AATACAAAA-CAACAGCAATACGA--CCGACACTTACTACAATAAAACAACAGCGGTTT--------GTTATTTT--TTTTCCAGTGTGCTCTTGTG---------------------------------------------AGTG---------------------T---------------------GTG--AACCGT-ACGGT--------GTTCTTTTT-------TTCGCGGCGCGGTGCGGCT------------------CTGTTGTTGTT-------------------------------GT--------TG--------------CTGCC-----T-CAAATCGC-----------------------------AC-ACCGACACCGAAAAACACACACACAC--ACATATAATACAATTGCAGTGTCGTATCGAAGG--------------------------G--AAT-AAAAAGAAAAAT------------------------------ATAAATAAAT------------TAATGTGT------------GA----------------CAACA-AACGCCAAGCTA----------------------------------AC-GCTCGA-GTCTGAAATAAAAACGGAAC--------------------------------------------------------GGAAAG-CCAGCAGSizeHit CountTotal NormTotal
No Reads
droAna3
TAAT------------T----------------------------------------CTTCCTTCCAAAGCTGCTTATCGAATAA-GCAAACCAAGCAAT--------------AAT-AC-AAAAAAATA-AAATATTAAAAAAAAACCGAAATTAAAAGAACACCACC-ACCAT----------------------------------------ATAGC-ATATAAAAGCGAGCAGCGG-A-----GT-CGA-----AGAAAACGCATAAAATTCGACAAGT-----GAAGA-AAAC-ACAA-------T----------------------TCGGCGGCGTTTAGGTTCC---TT-T--TTTTTTGTTGTTTTTTAT---TTTT-------ATG----------------------------TGAGTG---------------------TGTGCCAACA----TATCGCGTGTG--T--------------GCT--GTTTT--TT-------TTGGCGGTGCGGT------------------------------------------------------------GTTATT--GTTGTTGTTG-----------------CTCGAT-CGCATC-C-----------A------------------CCC-GGCA---------------------------------------------------------------TAT---------ATACTGGGA--TAT-AGTTCGA-----------------------------------------------------------------------------GG----------------CAACA-A---------------------------------------------------GGACAAGCG---------AGAAAAAAAAA---A---------------------------------------A----AT--------AAGAGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTGTTG-----------------CTCGAT-CGCATC-C-----------A------------------CCC-............................................................................................................................................................................................................................................................................................................................................................2712.002110000
......................................................................................................................................................................................................................................................................................CAAGT-----GAAGA-AAAC-ACAA-------T----------------------TCGGCGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002020000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--TAT-AGTTCGA-----------------------------------------------------------------------------GG----------------CAACA-A---------------------------------------------------GGAC..........................................................................................2312.002020000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATT--GTTGTTGTTG-----------------CTCGAT-CGC...................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-----------------CTCGAT-CGCATC-C-----------A------------------CCC-............................................................................................................................................................................................................................................................................................................................................................1911.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-GGCA---------------------------------------------------------------TAT---------ATACTGGGA--TAT-AG............................................................................................................................................................................................................................................................2211.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGA-----------------------------------------------------------------------------GG----------------CAACA-A---------------------------------------------------GGACAAGCG---------AG..........................................................................2211.001100000
........................................................................................................................................................ATTAAAAGAACACCACC-ACCAT----------------------------------------ATAGC-..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----TATCGCGTGTG--T--------------GCT--GTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.........................................................................................................................................................TTAAAAGAACACCACC-ACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GTG---------------------TGTGCCAACA----TATCGCGTGTG--T--------------GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCGA-----------------------------------------------------------------------------GG----------------CAACA-A---------------------------------------------------GGA...........................................................................................1811.001100000
............................................................................................................................................................................CAT----------------------------------------ATAGC-ATATAAAAGCGAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-----------------CTCGAT-CGCATC-C-----------A------------------CCC-GGA.........................................................................................................................................................................................................................................................................................................................................................2211.001010000
...............................................................................................................................................................................................................................ATAAAAGCGAGCAGCGG-A-----GT-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....................................................................AGCTGCTTATCGAATAA-GCAAACCAAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------------CTCGAT-CGCATC-C-----------A------------------CCC-GGC.........................................................................................................................................................................................................................................................................................................................................................2111.001010000
.....................................................................................................................................................................................................................................................................................................................................................GTTTAGGTTCC---TT-T--TTTTTTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTT--TT-------TTGGCGGTGCGGT------------------------------------------------------------................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGA--TAT-AGTTCGA-----------------------------------------------------------------------------GG----------------CAACA-A---------------------------------------------------GGAC..........................................................................................2611.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGGA--TAT-AGTTCGA-----------------------------------------------------------------------------GG----------------CAAC....................................................................................................................................................2311.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGGTGCGGT------------------------------------------------------------GTTATT--GT......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
..................................................................................................................................................................................................................................................................................................AGA-AAAC-ACAA-------T----------------------TCGGCGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-AGTTCGA-----------------------------------------------------------------------------GG----------------CAACA-A---------------------------------------------------GGACAAGCG---------AGA.........................................................................2911.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATC-C-----------A------------------CCC-GGCA---------------------------------------------------------------TAT---------ATAC.........................................................................................................................................................................................................................................................................2111.001010000
....................................................................AGCTGCTTATCGAATAA-GC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-AGTTCGA-----------------------------------------------------------------------------GG----------------CAACA-A---------------------------------------------------GGAC..........................................................................................2111.001010000
................................................................................................................................................................................................................................................................................................GAAGA-AAAC-ACAA-------T----------------------TCGGCGGCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGA--TAT-AGTTCGA-----------------------------------------------------------------------------GG----------------C.......................................................................................................................................................1811.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................G----------------------------TGAGTG---------------------TGTGCCAACA----TAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
......................................................................................................................................................................................................................................................................................CAAGT-----GAAGA-AAAC-ACAA-------T----------------------TCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCGGT------------------------------------------------------------GTTATT--GTTGTTGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
droBip1
CTGC--------------------------ATTTTATT-------------------CTTCCTTCCAAAGCTGCTTATTCAATAA-GCTA----AGCGATATATAAAAACAAAAAAA-TC-----------A-----------------------AAAAGAACACA-CCGTGCGTAGA--GC------A----------------------------------------------------AAACTATATCAAAGACTAGAAAACGCATAAAATTCGACAAGT-----GA--------AACAA-------T----------------------TTGGCGGCGTTTA-----GTTATT-T--TTTTTTCGTTTTTGTTTTTAAT------------G----------------------------TGAG---------------A--GAGTGTGTG------CCTAAATCGCGTGTG--T------GCTGTTTTCTT--TTTTT--TTTTGTCATTTGGCGGTGCGGT-----------------------------GTTGTT---------------------------------GT------TG--------------CGGCTTGTT-TCCATTCCACTATCCATCCACTCGGTAGGAGTGGACAACCC-GGCA------------------------------------T----TC-A-----------------TCGT---------ATGAC-GCC--GAT-ATATG--C-AAGCAGGACATTTATATAGCACAAAA----A------G------GAT---A--------ATCT------------AA----------------CA--A-AACTCTA--TAA----------------------------------AA-GCTTAAAAA------------------------CCA---------------------------------------A----AAAAAAAAA-AAAAAAASizeHit CountTotal NormTotal
No Reads
dp5
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGGCCGTTC--------GTTTTTTT--TTGGCCAAAGTGATTGAGGGA-----------GAGTGAATG--TG--------------------TGTG------------------------------------------TGTG--T------CTCGCTCTCGG--GTTCG--TT-------TCCGCGGCGTGCT--------------------------------GT---------TTG------------------TT--GT------TGCACATAATTCCCTGCTGTTCTGCTC-CAAA---------------------------------------------------------------------------------------------------TTCGCATCCAATCCAGAGAATAGCG--TAT-ATA----------------------------------------------------TATATATATATGTATATGACAACTTTCATGACGACAAACAACAAATTCATCA-AACGCCGAGCGAACAACAACAGAAGCAGCA---------------------------------------------------GTCGAGTGAAAACGGAGAGAAGAATTTCTCATTGAAGCCGGAA----------AAAA-AGAAAAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGACAACTTTCATGAC.......................................................................................................................................................................1912.0020110000000
......................................................................................................................................................................................................................................................................................................................................................................T--TTGGCCAAAGTGATTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACAACTTTCATGACGACAAAC................................................................................................................................................................2411.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTGCTGTTCTGCTC-CAAA---------------------------------------------------------------------------------------------------T............................................................................................................................................................................................................................................................................................2211.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................A-----------GAGTGAATG--TG--------------------TGTG------------------------------------------TGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCT--------------------------------GT---------TTG------------------TT--GT------TGCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGAAAACGGAGAGAAGA..........................................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------TT--GT------TGCACATAATTCCCTGC...............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA---------------------------------------------------GTCGAGTGAAAACGGAGA...............................................2511.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATAATTCCCTGCTGTTCT.........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACAACTTTCATGACGACAAACAACAA...........................................................................................................................................................2911.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------TT--GT------TGCACATAATTCCCTGCTGT............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTCCCTGCTGTTCTGCT......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------TGTG------------------------------------------TGTG--T------CTCGCTCTCGG--GTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT---------TTG------------------TT--GT------TGCACATAATTCCC..................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACAACTTTCATGACGA.....................................................................................................................................................................1911.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGAAGCAGCA---------------------------------------------------GTC..............................................................2011.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTCGG--GTTCG--TT-------TCCGCGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTCCCTGCTGTTCTG........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCA-AACGCCGAGCGAACAACAAC..............................................................................................................................2411.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGAAGCAGCA---------------------------------------------------GTCGA............................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAATTTCTCATTGAAGCCGGA.......................2411.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG------------------TT--GT------TGCACATAATTCCCTGCT..............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................AGGGA-----------GAGTGAATG--TG--------------------TGTG------------------------------------------T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGGAGAGAAGAATTTC.....................................1911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAGTGAAAACGGAGAGA.............................................2011.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGAGCGAACAACAACAGAAGCAGC.....................................................................................................................2711.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................T--TTGGCCAAAGTGATTGAGGGA-----------GA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGAAGCAGCA---------------------------------------------------GTCGAGTGA........................................................2311.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGAAGCCGGAA----------AAAA-AGA....2111.0010000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCGTGCT--------------------------------GT---------TTG------------------TT--GT------................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACTTTCATGACGACAAACA...............................................................................................................................................................2311.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TG------------------------------------------TGTG--T------CTCGCTCTCGG--GTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------TGTG------------------------------------------TGTG--T------CTCGCTCTCGG--.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATTTCTCATTGAAGC...........................1811.0010010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATTGAAGCCGGAA----------AAAA-AGA....2311.0010010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA---------------------------------------------------GTCGAGTGAAAACGGA.................................................2311.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGG--GTTCG--TT-------TCCGCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTGCT--------------------------------GT---------TTG------------------TT--GT------TGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAATCCAGAGAATAGC.....................................................................................................................................................................................................................................................................1911.0010010000000
......................................................................................................................................................................................................................................................................................................................................................................T--TTGGCCAAAGTGATTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................GAATG--TG--------------------TGTG------------------------------------------TGTG--T------CT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.2510000100000
droPer2
AAAA------------AAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGA-AAATAACTAACTA---T---------------------TCCGGCCGTTG--------G---TT-TTTTTGGCCAAAGTGATTGAGGGA-----------GAGTGAATG--TG--------------------TGTG------------------------------------------TGTG--T------CTCGCTCTCGG--GTTCG--TT-------TCCGCGGCGTGCT--------------------------------GT---------TTG------------------TT--GT------TGCACATAATTCCCTGCTGCTCTGCTC-CAAA---------------------------------------------------------------------------------------------------TTCCCATCCAATCCAGAGAATAGCG--TAT-ATA--------------------------------------------------TATATATATATATGTATATGACAACTTTCATGACGACAAACAACAAATTCATCA-AACGCCGAGCGAACAACAACAGAAGCAGCA---------------------------------------------------GTCGAGTGAAAACGGAGAAAAGAATTTCTCATTGAAGCCGGAA----------AAAA-AGAAAAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATTTCTCATTGAAGCCGGA.......................2314.004400000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGGAGAAAAGAATTTCT....................................2013.003300000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAACAACAGAAGCAGCA---------------------------------------------------GTCGAGT..........................................................2713.003000003
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCCCTGCTGCTCTGCTC-C...................................................................................................................................................................................................................................................................................................................................................................................................2113.003300000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGACAACTTTCATGACGAC....................................................................................................................................................................2212.002200000
........................................................................................................................................................................................................................................................................................................ATAACTAACTA---T---------------------TCCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTCCCTGCTGCTCTGCTC-CAAA---------------------------------------------------------------------------------------------------.............................................................................................................................................................................................................................................................................................2611.001100000
..............................................................................................................................................................................................................................................................................................................................................................................CAAAGTGATTGAGGGA-----------GAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCATCA-AACGCCGAGC........................................................................................................................................2011.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTGCTGCTCTGCTC-C...................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAACAACAGAAGCAGCA---------------------------------------------------GT...............................................................2211.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT--------------------------------GT---------TTG------------------TT--GT------TGCACATAATTCCCTGC...............................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAGAGAATAGCG--TAT-ATA--------------------------------------------------T........................................................................................................................................................................................................2211.001001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTCGG--GTTCG--TT-------TCCGCGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGACAACTTTCATGAC.......................................................................................................................................................................1911.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................AATG--TG--------------------TGTG------------------------------------------TGTG--T------CTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGAAGCAGCA---------------------------------------------------GTCGAGC..........................................................2411.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAGAAGCAGCA---------------------------------------------------GTCGA............................................................2311.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGAAGCCGGAA----------AAAA-AG.....2011.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA---------------------------------------------------GTCGAGTGAAAACGGAGA...............................................2511.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGGAGAAAAGAATTT......................................1811.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA---------------------------------------------------GTCGAGTGAAAACGGA.................................................2311.001010000
......................................................................................................................................................................................................................................................................................................................................................................TTTTTGGCCAAAGTGATTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCAGCA---------------------------------------------------GTCGAGTGAAAACGGAG................................................2611.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAATTTCTCATTGAAGCCGGA.......................2411.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................GTGAATG--TG--------------------TGTG------------------------------------------TGTG--T------CTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATCCAGAGAATAGCG--TAT-..............................................................................................................................................................................................................................................................2111.001001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---------------------------------------------------GTCGAGTGAAAACG...................................................1811.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCCTGCTGCTCTGCTC-CAA.................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
droWil2
CTGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------------------GCTCCTGCTGC---TGCTGTTGTTGTTGTTGTTGTTGTGTATTGTTGATTTAGTTGTTGTT--GTTGTTGTTG-----------------TT-----GTCATTGCTT----------------------------TGCCTAA----------------------TGC-----------GT---------------------G--CTCAA----G----ACGACTATCTAAATGGTTTAGTCTAAG----------------------A----AAGT---AGTTGT------------TCAAATGT------------TG----------------CTACA-TCTGCGAGGAAA---------------------AGATAACG---AAAA---------------------------AGATAAACCA---------------------------------------G---AG-AA--ACA-AAAATGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGTTGTTGTTGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGTTGTTGTTGTTGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
droVir3
TTGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTGTT------G---TTCA--ATTTCAAT--TATGTTTGT--TGCGCAATGCGTTG----------------------------AAATTG-----------------------------CG-----------CGTACTT------TTTGCT-----A--------------------------------------TTTGCTGTTGTTGTTGTTGTTGTTGTTGTTGATG-TTGTTGTTGATGTTGCTGTTGCT--GTTGCTGTTG-----------------TT-----AGCTGGCCAA-----------------------------AA-TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTGTTGTTGTTGATG-T................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000000000000000000200000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTTGATGTTGCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000100000000000000000000000000000000000000000000000000000
droMoj3
TGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGTTT--------G---TT-T--GTT---------------------------------------------------------------------------------------------------------------------------TGCT-----CA---------TT-----------------------GTTATTGTTGT------TGTTGTTGTTGTT---------------------------------------GTTG--------------CTGCCTAGT-CGCAACGCATTT---------------------------------------------------------C-----------AA---------------------A------C---------TCAATTATT--ATA-ATTGGCAAGAAG------------------------------CGACGCTGA--------------------T------------GA----------------CAACA-ACAGC------------------AGCAACAACAAGAAACCCTGCCAAA---------------------------ACTGAAACCA---------------------------------------A---AGCAAAAAAA-AAAAAAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CAAT------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------G---TT-T--TTGAAT--TCTGTGTTCGA---------------------------------TCGGTCCGACGTGAAAG-----------------CGAGAG-------------------TGTT--G------CCGGT------------------------------------------GCCACAGTTGCTGTTGTTGTTGTTGCTGTAGCTGTTGCTGA-TGGTGTGTTTGCTGTTGG-----------TG--------------CTG-----TCC-CAGT-T-----------A------------------CGCGCCA----------------------AGC-----------AT---------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 09:45 AM