ID:

dsi_23534

 Coordinate:

2l:18679212-18679409 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.8 -20.7 -20.7

Flybase annnotation

five_prime_UTR [2l_18679208_18679211_-]; CDS [2l_18678776_18679207_-]; exon [2l_18679410_18679514_-]; five_prime_UTR [2l_18679410_18679514_-]; exon [2l_18678776_18679211_-]; intron [2l_18679212_18679409_-]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCATAATTGCACAATAATATAATTTAATTGCATCCAAAAAGCTTTAATAAGTAAGTCTATGAGCGAGCCGAGCTAACTGCGTTGGAAGAACAGAAAGAGCAGGGGATAAAAACACACAAACAGCACATTGTCATTAAACCATGACGTTCTAACCTAAAAACTGATGAAATTTCCAAGTCCAGTCGGCTTTCATTTACATATATAGTTTATAGAAAAGTAACTTAATATATTACGTTTTTTATTCAAAGGATAATGGCTGCTCAGTTCTTCAATCGCATTGGCCAAATGGGCCTTGGAG
**************************************************..............(((((((.....(((..(((((((..((...((.....(((.......................((((((......))))))......))).....))..))...)))))))...))))))))))************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 M053
female body
 O002
Head
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 O001
Testis
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
........................................................................................................................................................................ATTTCCAAGTCCAGTCGGCTT............................................................................................................. 21 0 1 6.00 6 5 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................TGCTCAGTTCTTCAATCGCATTGGC................ 25 0 1 5.00 5 0 3 1 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................AATTTCCAAGTCCAGTCGGCTT............................................................................................................. 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TCCAGTCGGCTTTCATTTAC..................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................AAATTTCCAAGTCCAGTCGGC............................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
............................TGCATCCAAAAAGCTTTAATAAGA...................................................................................................................................................................................................................................................... 24 1 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................TAAGATAATGGCTGCTCAGTTCTTCA........................... 26 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................................................................................................TTAATAAGATAATGGCTGCTCAGTTC............................... 26 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TTACGTTTTTTATTCAAAGGA................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTCTATGAGCGAGCCGA................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................TTCTTCAATCGCATTGGCCAAATG.......... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................ATTCAAAGGATAATGGCTGGT..................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................AACCATGACGTTCTAACCTAA............................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................AGTTCTTCAATCGCATTGGCC............... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TACATTACGTTTTTTATTCAAAGGA................................................ 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................AAAGGATAATGGCTGCTCAGT................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................CAGTTCTTCAATCGCATTGGC................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................AATCGCATTGGCCAAATGGGC....... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................TATATTACGTTTTTTATTCAAAGGA................................................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................GCTTGACGTTCTAACCTA.............................................................................................................................................. 18 2 2 1.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................TTGGAAGAACAGAAAGAGCAG.................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TACGTTTTTTATTCAA.................................................... 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......TTGCACAATAATATAATTTAA............................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................................................AAAGGATAATGGCTGCTCAG.................................. 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................ATCCAAAAAGCTTTAATAAG....................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................................................................GTTCTTCAATCGCATTGGCC............... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................AAGGATAATGGCTGCTCAGTTC............................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
........................TAATTGCATCCAAAAAGCTTTAATAAGAA..................................................................................................................................................................................................................................................... 29 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................TGACGTTCTAACCTAGA............................................................................................................................................ 17 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................GCTTGACGTTCTAACCT............................................................................................................................................... 17 2 5 0.40 2 0 0 0 0 2 0 0 0 0 0 0 0 0
...........................................................................................AGAAAGAGCAGGGGAAAA............................................................................................................................................................................................. 18 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................CTTGACGTTCTAACC................................................................................................................................................ 15 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................TTGACTCCAACAAGCTTTAA........................................................................................................................................................................................................................................................... 20 3 11 0.18 2 0 0 0 0 0 2 0 0 0 0 0 0 0
.............................................................................................AAAGAGCAGGGGAAAAAA........................................................................................................................................................................................... 18 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................................TGGAAGAACTGAAAGA........................................................................................................................................................................................................ 16 1 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TTGACGTTCTAACCTAGG............................................................................................................................................ 18 3 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0 0
....................................................................CGAGGTAACTGGCTTGGAA................................................................................................................................................................................................................... 19 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1
...................................................................CCGAGGTAACTGGCTTGGA.................................................................................................................................................................................................................... 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................................................................................................................................TTTCGTTCTTTATTCAAA................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................AAAGTAGGTCTATGAGGG......................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................CTTGACGTTCTAACCTGG............................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................GTTGGCAGAACAGAA........................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CGTATTAACGTGTTATTATATTAAATTAACGTAGGTTTTTCGAAATTATTCATTCAGATACTCGCTCGGCTCGATTGACGCAACCTTCTTGTCTTTCTCGTCCCCTATTTTTGTGTGTTTGTCGTGTAACAGTAATTTGGTACTGCAAGATTGGATTTTTGACTACTTTAAAGGTTCAGGTCAGCCGAAAGTAAATGTATATATCAAATATCTTTTCATTGAATTATATAATGCAAAAAATAAGTTTCCTATTACCGACGAGTCAAGAAGTTAGCGTAACCGGTTTACCCGGAACCTC
*************************************************************************************************************..............(((((((.....(((..(((((((..((...((.....(((.......................((((((......))))))......))).....))..))...)))))))...))))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 O002
Head
 O001
Testis
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
..............................................................................................................................................................................................................................................................CCGACGAGTCAAGAAGTTAGC....................... 21 0 1 5.00 5 4 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TATATCAAATATCTTTTCATT.............................................................................. 21 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
................................................................................................................................................GCAAGATTGGATTTTTGACT...................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................GGTCAGCCGAAAGTAAATGTA................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.................................................................TCGGCTCGATTGACGCAACC..................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................GCAAGATTGGATTTTTGACTA..................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................................................TTTCGCTCGGTTCGATTGACGC......................................................................................................................................................................................................................... 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...................................................................................................................TGTTTGTCGTGTAACAGTAAT.................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................TCCCCTATTTTTGTGTGTTTG................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................CAAGAAGTTAGCGTAACCGGT.............. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................GATTGGATTTTTGACTACTTT................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................TACCGACGAGTCAAGAAGTT.......................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
..........................................................................................................................CGTGTAACAGTAATTTGGT............................................................................................................................................................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................CCGACGAGTCAAGAAGTTATC....................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................CGATTGACGCAACCTTCTTGTC............................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................TCAGCCGAAAGTAAATGTATA................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................CGAGTCAAGAAGTTAGCGTAA................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................CAGGCCAGCGGAAAGTCAATGT.................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................................................TACCGACGAGTCAAGAAGTTA......................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................GAGTCAAGAAGTTAGCGTAAC.................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................CGGCTCGATTGACGCAACCT.................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............TTATATTAAATTAACGTAGGT...................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................AAAATTGGATTTGTGACT...................................................................................................................................... 18 2 7 0.14 1 0 0 0 0 0 0 0 0 1 0
...............................................................................................................................................................................................................................................................CGCCGAGTCAAGGTGTTAG........................ 19 3 16 0.06 1 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................................................................AAAAATAAATTGCCTATTA............................................ 19 2 17 0.06 1 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................TGCTGCAAGATTGGGT.............................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:18679162-18679459 - dsi_23534 GCATAATTGCACAATAATATAATTTAATTGCATCCAA-AAA---------GCTTTAATAAGTAAGTCTA-TGAGCGAGC------------------------CGAGCTAACTGCGTTGGAAGAACAGAA-AGA--GCAG-GGGATA--AAA-ACA--CACAAACAGCACATTGTCATTAAACCATGACGTTCTAACCTAAAAA-CTGATGAAATTTC-CAAGTCCAGTCGGCTTT---------------------------------------C--ATTTACATAT----AT--AGTTTA---------------T--A----------------GAAAAGTAA-------------------CTTAATA-TATT-AC--GTTT--T--TTAT---T---------------CA-AA--GGATAATGGCTGCTCAGTTCTTCAATCGCATTGGCCAAATGGGCCTTGGAG
droSec2 scaffold_7:2752582-2752879 - GCATAATTGCACAATAATATAATTTAATTGCATCCAA-AAA---------GCTTTAATAAGTAAGTCTA-TGAGCGAGC------------------------CGAGCTAACTGCGTTGAAAGAACAGAA-AGA--GCAG-GAGATA--AAA-ACA--CACAAACAGCACATTGTCATTAAACCATGACGTTCTAACCTAAAAA-CTGATGAAATTTC-CAAGTCCAGTCGGCTTT---------------------------------------C--ATTTACATAT----AT--AGTTTA---------------T--A----------------GAAAAGTAA-------------------CTTAATA-CATT-AC--GTTT--T--TTAT---T---------------CA-AA--GGATAATGGCTGCTCAGTTCTTCAATCGCATTGGCCAAATGGGCCTTGGAG
dm3 chr2L:19123507-19123806 - GCAAAATTGCACAATAATTTAATTTAAGTGCAACCAA-AAA---------CCTTTAACAAGTGAGTCTA-TGAGCGAGC------------------------CGAGCTAACTGCGTTTGAAGACCAGGA-AGA--ACAG-GGGATA--AAA-ACA--CGCAAACAGCACATTGTCATTAAACCATGACGTTCTAACCTAAAAA-CTGATGAAATTTC-CAAGTCCAGTCGGCTTT---------------------------------------C--ATTTACATAT----AT--AGTTTA---------------T--A----------------GAACAGTAA-------------------CTAAATA-CATT-AC--GTTT--GTTTTAT---T---------------CA-AA--GGATAATGGCTGCTCAGTTCTTTAATCGCATTGGCCAAATGGGCCTCGGAG
droEre2 scaffold_4845:5148833-5149132 + GCAAAATTGCACAATAATTTGATCTAATTGCAAACAA-AAA---------CCATAAACAAGTAAGTCTA-TGAGCGGTC------------------------CGAGCTAACTGCGTTGGAAGA-GCCAC-AGA--ATTG-GGTATT--AAA-CCA--CTGAAACAGCACATTGTCT-CTAACCATGACGTTCTAACCTAAAAA-CTGATGAAATTTC-CAAGTCCAGTGGGCTTT-------------------------------------C-T--ATTTACATAT----AT--AGTTTA---------------T--A----------------GAACAGTAA-------------------CTAAATA-TATT-CG--GTTT--TTTTTAT---T---------------CCAAA--GGATAATGGCTGCTCAGTTCTTCAATCGCATTGGCCAAATGGGCCTCGGAG
droYak3 2R:5639110-5639408 - GCAAACTTGCACAATAATTTGATTTAATTGCAACCAA-AAA---------GCTTTAAAAAGTAAGTCTT-TGATCGGGC------------------------CGAGCTAACTGCGTTGAAGGA-CTCAC-AGA--ATGG-CGCGTT--GAA-ACA--CCGAAACAGCACATTGTCGTATAACCATGACGTTCTAACCTAAAAA-CTGATGAAATTTC-CAAGTCCAGTCGGCTTT-------------------------------------C-T--ATTTACATAT----AT--AGTTTG---------------T--A----------------GAACAGTAA-------------------CTAAATA-CATT-TC--TTTT--TT-TTAT---T---------------CC-AA--GGATAATGGCTGCTCAGTTCTTTAATCGCATTGGCCAAATGGGCCTTGGAG
droEug1 scf7180000409463:1451736-1452031 - GCGAAATTGCACAATAATTTAATCAAATTTTAAACAA-TAA---------GCTTTAATAAGTAAGTGTG-AAAGTAAGC------------------------CGACCAAAATAGATTGAAAAC-CCGTT-TGA--ATTT-GGGATA--AAA-ACG--CATAAACAGCACGTTGTTTTATAGACATGACGTTCTAACCTAAAAA-CTGATGAAATT-C-CAAGTCCAGTCGGCTTTT------------------------------------T-T--ATTTACATAT----AT--TATTTA---------------T--AA------------------GAGTAA-------------------CTAAATA-TTTT-AT---TTT--TG-TTTT---T---------------CC-AA--AGATAATGGCTGCTCAGTTCTTTAATCGTATTGGCCAGATGGGCCTCGGAG
droBia1 scf7180000302422:4516866-4517165 + GCAAAATTGCACAATAATTCAATTTAATTGAAACCAA-AAA---------GCTTTAACAAGTAAGTTTG-CAGGAGGCC------------------------CAACCTTTCTGCATTGGAAGA-CCCAC-TGA--ACTG-GTTATA--AAA-ACA--CATAAACAGCACGTTGTGCCCTGGTCATGACGATCTAACCTAAAAAGCTGATGAAATTTC-CAAGTCCAGTCGGCTTT-------------------------------------T-T--ATTTACATAC----AT--AG-TTG---------------T--AG----------------GACAGTGA-------------------CTAAATA-CCTT-AC--GTTT--TGTTCTT---T---------------CC-GT--AGATAATGGCTGCTCAGTTCTTCAATCGCATCGGCCAAATGGGCCTTGGAG
droTak1 scf7180000416007:78694-78991 + GCA-AATTGCACAATAATTTGAATTAATTCAAACTAA-AAA---------GCTTTAATAAGTAAGTGTA-AGAGTGGGC------------------------TGAGCAAACTGCATTGGAGAC-CCCAC-TGA--GCCA-GCTTTA--AAA-ACA--CAAAAACAGCACGTTC-CATCTAATCATGACGTTCTAACCTAAAAAGCTGATGAAATTTC-CAAGTCCAGTCGGCTTT-------------------------------------T-T--ATTTACATAT----AT--AG-TTA---------------T--AA---------------GATAACTAA-------------------ATAAATA-CTTT-TC--GTTT--TG-TT-CT--C---------------AA-AT--AGATAATGGCTGCTCAGTTCTTCAATCGCATTGGCCAAATGGGCCTTGGAG
droEle1 scf7180000491046:3867948-3868252 + GCAAAATTGCACAATAATTTGATTTAATTGAAACCAA-AAA---------GCTTAAATAAGTAAGTTTA-AATGCAGAC------------------------CGACGAAATTGCATTGGAATA-CCACT-CGA--AATG-GGCATA--AAA-ACA--CATAAACAGCACGTTGTCTGCCAGCCATGACGTTCTAACCTAAAAAACTAATGAAATTTCCCAAGTCCAGTCGGCTTT-------------------------------------T-T--ATTTACATATGTATAT--A-GATA---------------T--AA----------------GACAGTAA-------------------CTGAATA-CTTT-AC--GTTT--GGTTCTT---C---------------CC-AA--AGATAATGGCTGCTCAGTTCTTCAATCGAATTGGCCAAATGGGCCTCGGTG
droRho1 scf7180000778448:13093-13393 + GCAAAATTGCACAATAATTTGATTTAATTAAAACCAA-AAA---------GCTTTAATAAGTAAGTTTT-CAATCAGGC------------------------TGACTAAACTGCATTGGAAAT-CCCCG-AGA--AATG-GGTGTA--AAA-TCA--CATAAACAGCACGTTGTCGGCTAGAAGTGACGTTCTAACCTAAAAAACTGATGAAATTTCCAAAGTCCAGTCGGCTTT-------------------------------------T-T--ATTTACATAT----AT--A-TTTA---------------T--AA----------------GACAGTAA-------------------CTATATA-CTTT-CC--GTTC--TGTTGAT---T---------------CC-AA--AGATAATGGCTGCTCAGTTCTTCAACCGCATTGGCCAATTGGGCCTCGGAG
droFic1 scf7180000454144:477303-477600 + GCAAAATTGCACAATAATTTCGTTTAATTGAAACCAA-AAA---------GCTTTAATAAGTAAGTATTAAATGTTGGC------------------------AGTGG-AAATCCGTGGAAGAA-ACACT-TGA--TTTT-TGGATA--AAC-ACA--CATAAACAGCACGTTGTCGGCTAGCCATGACGTTCTAACCTAAAAAACTGACGAAATTTATCAAGTCAAGTCGGCTTT-------------------------------------T-T--ATTTACATAT----A----ACCCA---------------T--AA----------------GATAAT-A-------------------CTTAATA-CTTT-TC--GTTT--TG-TTTC---T---------------TT-GA--AGGTAATGGCTGCTCAGTTCTTCAACCGCATTGGCCAAATGGGCCTTGGCG
droKik1 scf7180000302684:740132-740441 - GCAAAATTGCACAATATTCTGATTTAATTTAACTCAA-ACA---------GCTTTAATTAGTAAGTGTT-TAAGCGCAC------------------------AGATTGGGTTTTACAAGAAAT-CCCTT-TCA--ATTA-CACCGA--AAA-TCA--TGTAAACATCACGTTGTCGGGCAGCAATGACGTTCTAACCTAAAAATCTGACGAAATTGC-TTAATCCAGTCGGCTTT-------------------------------------T-T--ATTTATGTGTA---GA--AGTCTA---------------TTGAA----------------GACACCAA-------------------CTGATTA-ATTCCATTTGTTT--T--TTATT--T-------------AACC-ACAGACACAATGGCTGCTCAATTCTTCAATCGCATCGGCCAGCTTGGTCTTGGAG
droAna3 scaffold_12916:5302408-5302713 + GCA--ATTGCACAATAATTTAAGAGTTTTAACAATAA-AAA---------GCTTTAAAAAGTAAGTGAT-TGAGGATAT-----------------------TAGTG-GCCTTTAATTGAAATG-A-AGT-TGCTAAGT--GTATTA--AAA-ACA--CACAAACAGCACGTTGTCGGCCAAGAGTGACGGCCTAACCTAAAAAGCTGGTGAAATATT-GTAATCCAGTCGGCTTT-------------------------------------T-T--ATTTACATGTT---AT--A-GATA---------------T--AG-GT-----GT--TA-GCGTACTAA-------------------TATATCA-TTTT-CTTTGTT------TTATCC-A---------------CC-AC--AGACAATGGCTGCTCAGTTCTTCAATCGCATCGGTCAGTTGGGCCTTGGCG
droBip1 scf7180000396568:1547728-1548033 - GCA--ATTGCACAATAATTTAAGAGTTTTACCAATAA-AAA---------GCTTTAAAAAGTAAGTGAT-TGAGGATAT-----------------------CAGTG-GCGTTTAATTGAAATA-CACGTCCCA--AGT--GGGTTA--AAA-ACC--CACAAACAGCACGTTGTCGGCAAAGAATGACGGCCTAACCTAAAAAGCTGATGAAATATT-GTAATCCAGTCGGCTTT-------------------------------------T-T--ATTTACATGTT---AT--A-GATA---------------T--AG-GT-----GT--TT-GCATACTAA-------------------TAGATCA-TTTT-TATTGTT------TTACTC-A---------------CC-AC--AGACAATGGCTGCTCAGTTCTTCAATCGCATCGGTCAGTTGGGCCTTGGCG
dp5 Unknown_group_454:12640-12852 - G---------------------------------------------------------------------------------------------------------------------------------------------GCATA--AAA-ACA--TGAACACTGCACGTTGTCGGCCAACTATGACGATCTAACCTAAAAAGTTGATGAAATTGA-TAAGTCTAGTCGGCTTT-------------------------------------T-T--ATTTACATAC----ATATA-GAAA---------------T--AA-ATACATAGT--TAGGCACATTAA-------------------GCCAATA-ATTT-CC--TTCT--TA-CTTT---C---------------GC-AC--AGACTATGGCTGCCCAGTTTTTCAATCGCATTGGCCAGATGGGCCTCGGAG
droPer2 scaffold_16:512533-512745 - G---------------------------------------------------------------------------------------------------------------------------------------------GCATA--AAA-ACA--TGAACACTGCACGTTGTCGGCCAACTATGACGATCTAACCTAAAAAGTTGATGAAATTGA-TAAGTCTAGTCGGCTTT-------------------------------------T-T--ATTTACATAC----ATATA-GAAA---------------T--AA-ATACATAGT--TAGGCACATTAA-------------------GCCAATA-ATTT-TC--TTCT--TA-CTTT---C---------------GC-AC--AGACTATGGCTGCCCAGTTTTTCAATCGCATTGGCCAGATGGGCCTCGGAG
droWil2 scf2_1100000004585:7102414-7102758 - TTTTGA------------------ATTTTA--CATAATAAAGTCTTATTCGTTGTAAATAGTAAGTGGT-AAAAAGTTA---------AGA------GTAT--TTTCCTAACTTAGTTAGCAAAGTGTAG-TGT--CAAATTTATTACAAAAATTAAAT-GA-------AATTGACATTTCGT-CTGACGTTCTAACCTAAAAACCTGATGAAATCTC-TC------------------GCAGACACACACACACAGATACACAGTCGGCTTTTTTCTATTCATATGG----AT--AA-CTTTGGACTCGCTAAATATTAAA---------------------T-A-------------------TATAAAA-TATT-TT--GTAA--TA-TCATTTTTCAACGTTAGAAAGGACC-AC--AAAAAATGGCTGCTCAGTTCTTCAATCGTATTGGCCAGATGGGTCTCGGAG
droVir3 scaffold_12723:3077916-3078250 - GCGATTTTGTGCAATTATAACGT--TATTA----------A---------ACATT--TAAGTAAGCGCA-CAAATAAATATAAAGTTAGTAAAACCAGTTCACTGTAAACACGGCTATGAAAAAGTACAT-TGT--GCACTTTAATA--AGA-GCA--CATACGGTGCACTTTGC-GACTTTACATGACGTTCTAACCTACAAATCTGACGAAATACA-CA-ACTTAGTCGGCTTTC-GGT--------------------------------T-C--ATTTACATAA----AC-----ACA---------------CAAT--------------ATACACATTGAATTTATAACTTATCTAAAACTACATAATTTT-TT--GT----TG-TTAT---T--------------CTT-AA--GAAAAATGGCTGCTCAGTTCTTTAATCGTATTGGCCAAATGGGTCTCGGCG
droMoj3 scaffold_6500:6780599-6780782 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGACGTTCTAACCTATAAATCTGATGAAATGT--GAAACTGAGTCGGCTTTCC-AATGATTTACATAAACATATACAC-------------------------------------AA---------------T--AG-ACATTTACT--AATTTATATAAA-------------------CTGTATAATTTT-CT--GTTT--TTGTGTT---T---------------TT-AA--GTATAATGGCTGCTCAGTTCTTTAACCGCATTGGCCAAATGGGTCTTGGCG
droGri2 scaffold_15126:404603-404791 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGACTTTCTAACCTACAAATCTGACGAAATACA-AAAACCCAGTCGGCATTTCAGT--------------------------------T-C--ATTTACATAA----AC-----ATA---------------CAAAATACACCCATAAATTTACATCTAAA------------------GCTGCATAGTTTT-TCTTGTGTTATTTTTTT---C---------------TT-GT--AGATAATGGCTGCGCAATTCTTTAATCGTATTGGCCAAATGGGTCTCGGCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCATAATTGCACAATAATATAATTTAATTGCATCCAA-AAA---------GCTTTAATAAGTAAGTCTA-TGAGCGAGC------------------------CGAGCTAACTGCGTTGGAAGAACAGAA-AGA--GCAG-GGGATA--AAA-ACA--CACAAACAGCACATTGTCATTAAACCATGACGTTCTAACCTAAAAA-CTGATGAAATTTC-CAAGTCCAGTCGGCTTT---------------------------------------C--ATTTACATAT----AT--AGTTTA---------------T--A----------------GAAAAGTAA-------------------CTTAATA-TATT-AC--GTTT--T--TTAT---T---------------CA-AA--GGATAATGGCTGCTCAGTTCTTCAATCGCATTGGCCAAATGGGCCTTGGAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................ATTTC-CAAGTCCAGTCGGCTT.............................................................................................................................................................................................................................................2116.00651000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCAGTTCTTCAATCGCATTGGC................2515.00500000031010000000
....................................................................................................................................................................................................................AATTTC-CAAGTCCAGTCGGCTT.............................................................................................................................................................................................................................................2212.00220000000000000000
...............................................................................................................................................................................................................................TCCAGTCGGCTTT---------------------------------------C--ATTTAC............................................................................................................................................................................................2012.00220000000000000000
...................................................................................................................................................................................................................AAATTTC-CAAGTCCAGTCGGC...............................................................................................................................................................................................................................................2112.00220000000000000000
............................TGCATCCAA-AAA---------GCTTTAATAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................TT-AC--GTTT--T--TTAT---T---------------CA-AA--GGA................................................2111.00110000000000000000
............................................................GTAAGTCTA-TGAGCGAGC------------------------CGA..............................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCAATCGCATTGGCCAAATG..........2411.00100000010000000000
....................................................................................................................................................................................AACCATGACGTTCTAACCTAA...............................................................................................................................................................................................................................................................................2111.00100000100000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCTTCAATCGCATTGGCC...............2111.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................A-AA--GGATAATGGCTGCTCAGT.................................2111.00100000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCTTCAATCGCATTGGC................2111.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGCATTGGCCAAATGGGC.......2111.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TA-TATT-AC--GTTT--T--TTAT---T---------------CA-AA--GGA................................................2511.00100000000100000000
....................................................................................................................TTGGAAGAACAGAA-AGA--GCAG-...........................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................T-AC--GTTT--T--TTAT---T---------------CA-A......................................................1611.00100000001000000000
......TTGCACAATAATATAATTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................A-AA--GGATAATGGCTGCTCAG..................................2011.00100000000000001000
...............................ATCCAA-AAA---------GCTTTAATAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTCAATCGCATTGGCC...............2011.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AA--GGATAATGGCTGCTCAGTTC...............................2211.00100000100000000000
droSec2
GCATAATTGCACAATAATATAATTTAATTGCATCCAA-AAA---------GCTTTAATAAGTAAGTCTA-TGAGCGAGC------------------------CGAGCTAACTGCGTTGAAAGAACAGAA-AGA--GCAG-GAGATA--AAA-ACA--CACAAACAGCACATTGTCATTAAACCATGACGTTCTAACCTAAAAA-CTGATGAAATTTC-CAAGTCCAGTCGGCTTT---------------------------------------C--ATTTACATAT----AT--AGTTTA---------------T--A----------------GAAAAGTAA-------------------CTTAATA-CATT-AC--GTTT--T--TTAT---T---------------CA-AA--GGATAATGGCTGCTCAGTTCTTCAATCGCATTGGCCAAATGGGCCTTGGAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................ATTTAATTGCATCCAA-AA................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020020
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGTTCTTCAATCGCATTGGC................2312.0020020
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAGTTCTTCAATCGCATTGGC................2411.0011000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCATTGGCCAAATGGGCCTTGG..2511.0010010
...................................................................................................................GTTGAAAGAACAGAA-AGA--GCA.............................................................................................................................................................................................................................................................................................................................................2111.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCAGTTCTTCAATCGCATTGGC................2511.0011000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAATCGCATTGGCCAAATGGGC.......2511.0010010
...........................................................................GAGC------------------------CGAGCTAACTGCGTTGAAAGA............................................................................................................................................................................................................................................................................................................................................................2511.0010100
.......................TTAATTGCATCCAA-AAA---------GCTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCAATCGCATTGGCCAAATG..........2411.0010100
...................................................CTTTAATAAGTAAGTCTA-TGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
dm3
GCAAAATTGCACAATAATTTAATTTAAGTGCAACCAA-AAA---------CCTTTAACAAGTGAGTCTA-TGAGCGAGC------------------------CGAGCTAACTGCGTTTGAAGACCAGGA-AGA--ACAG-GGGATA--AAA-ACA--CGCAAACAGCACATTGTCATTAAACCATGACGTTCTAACCTAAAAA-CTGATGAAATTTC-CAAGTCCAGTCGGCTTT---------------------------------------C--ATTTACATAT----AT--AGTTTA---------------T--A----------------GAACAGTAA-------------------CTAAATA-CATT-AC--GTTT--GTTTTAT---T---------------CA-AA--GGATAATGGCTGCTCAGTTCTTTAATCGCATTGGCCAAATGGGCCTCGGAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAATGGGCCTCGGAG1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AAGTGCAACCAA-AAA---------CCTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TTTAAGTGCAACCAA-AAA---------CCTTTAA...............................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTAATCGCATTGGCCAAATGGGC.......2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................ACCAGGA-AGA--ACAG-GGGA.......................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001000
.......TGCACAATAATTTAATTTAAGTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATCGCATTGGCCAAATGG.........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCGCATTGGCCAAATGGGCCTCGGA.2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAATCGCATTGGCCAAATGGGC.......2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................ACAG-GGGATA--AAA-ACA--CGCAAT....................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
......................TTTAAGTGCAACCAA-AAA---------CCTTTA................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
...................................................................TA-TGAGCGAGC------------------------CGAGCTAACTG......................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTTCTTTAATCGCATTGGCC...............2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTGCTCAGTTCTTTAATCGCATT...................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAATTGCACAATAATTTAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCTGCTCAGTTCTTTAATCGC......................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTAATCGCATTGGCCAAATGGGC.......2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................AGTCTA-TGAGCGAGC------------------------CGAGCT...........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.....ATTGCACAATAATTTAATTTAAGTGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GATAATGGCTGCTCAGTTCTTTA...........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................ACAAGTGAGTCTA-TGAGCG............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGCTCAGTTCTTTAAT.........................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCTTTAATCGCATTGGCCAAAT...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGGCTGCTCAGTTCTT.............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGGCTGCTCAGTTCTTTA...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATCGCATTGGCCAAATGGGCCTCGGA.2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GCACAATAATTTAATTTAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................ACGTTCTAACCTAAAAA-CTGATGAA...................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTAATCGCATTGGCCA..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................ATA-CATT-AC--GTTT--GTTTTAT---T---------------C.........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATCGCATTGGCCAAATGGGC.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ATTTAATTTAAGTGCAACCAA-AAA---------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AATTTAATTTAAGTGCAACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................ACAGCACATTGTCATTAAAC.................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..AAAATTGCACAATAATTTAATTTAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAGTTCTTTAATCGCATT...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTGCTCAGTTCTTTAATCG.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................TTTAAGTGCAACCAA-AAA---------......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................ATA-CATT-AC--GTTT--GTTTTAT---T---------------CA-.......................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTAATCGCATTGGT................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGGCTGCTCAGTTCTTTAATCGC......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTAATCGCATTGGCCAAATGG.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................TTTAACAAGTGAGTCTA-TGAG..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTAAGTGCAACCAA-AAA---------CCT...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................ATA-CATT-AC--GTTT--GTTTTAT---T---------------CA-AA--...................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................CTA-TGAGCGAGC------------------------CGAGCTAACT.......................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCATTGGCCAAATGGGCCTCGGA.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AAAATTGCACAATAATTTAATTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTGCTCAGTTCTTTAATC........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AATTTAAGTGCAACCAA-AAA---------CCTTTA................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................ACAG-GGGATA--AAA-ACA--CGCAA.....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTAATCGCATTGGCCAAATGGGCCTC....3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GATAATGGCTGCTCAGTTCTTTAATCGC......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................GCGAGC------------------------CGAGCTAACTGC.....................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTGGCCAAATGGGCCTCGG..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTAATCGCATTGGCCAA.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GATAATGGCTGCTCAGTTCTTT............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AATTTAAGTGCAACCAA-AAA---------CC....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................T---------------CA-AA--GGATAATGGCTGCT.....................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TAA-------------------CTAAATA-CATT-AC--GTTT--G...................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................TGCAACCAA-AAA---------CCTTTAACAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAGTTCTTTAATCGCA.....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...AAATTGCACAATAATTTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATCGCATTGGCCAAATGGGCCTCGG..2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCTTTAATCGCATTGGC................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGTTCTTTAATCGCATT...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TTTAATTTAAGTGCAACCAA-AAA---------CC....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCGCATTGGCCAAATGGGCCTCGG..2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AAGACCAGGA-AGA--ACAG-GGGT.......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...................................................................................................................................................................................................ACCTAAAAA-CTGATGAAATTTC-CAAG.........................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................AATA-CATT-AC--GTTT--GTTTTAT---..........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................ACCAGGA-AGA--ACAG-GGGC.......................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GCAAAATTGCACAATAATTTGATCTAATTGCAAACAA-AAA---------CCATAAACAAGTAAGTCTA-TGAGCGGTC------------------------CGAGCTAACTGCGTTGGAAGA-GCCAC-AGA--ATTG-GGTATT--AAA-CCA--CTGAAACAGCACATTGTCT-CTAACCATGACGTTCTAACCTAAAAA-CTGATGAAATTTC-CAAGTCCAGTGGGCTTT-------------------------------------C-T--ATTTACATAT----AT--AGTTTA---------------T--A----------------GAACAGTAA-------------------CTAAATA-TATT-CG--GTTT--TTTTTAT---T---------------CCAAA--GGATAATGGCTGCTCAGTTCTTCAATCGCATTGGCCAAATGGGCCTCGGAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTTCTTCAATCGCATTGGC................2212.0020200000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGTTCTTCAATCGCATTGGC................2312.0021001000
....................GATCTAATTGCAAACAA-AAA---------CC....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTCAATCGCATTGGCC...............2011.0010001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTCAGTTCTTCAATCGCATTGGC................2711.0010100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGTTCTTCAATCGCATTGG.................2211.0010001000
................................................................................................................................................ATT--AAA-CCA--CTGAAACAGCACATTGTCC-......................................................................................................................................................................................................................................................................................................2811.0010100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCTGCTCAGTTCTTCAATCGC......................2511.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAATCGCATTGGCCAAATGGGC.......2411.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCAGTTCTTCAATCGCATTGGC................2511.0010001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCTTCAATCGCATTGGC................2111.0010100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGCATTGGCCAAATGGGC.......2111.0010100000
............AATAATTTGATCTAATTGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAATCGCATTGGCCAAATGGGCCT.....2611.0011000000
.........................AATTGCAAACAA-AAA---------CCATA.................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGGCTGCTCAGTTCTT.............................2011.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAATCGCATTGGCCAAATGGGCCTC....2711.0011000000
droYak3
GCAAACTTGCACAATAATTTGATTTAATTGCAACCAA-AAA---------GCTTTAAAAAGTAAGTCTT-TGATCGGGC------------------------CGAGCTAACTGCGTTGAAGGA-CTCAC-AGA--ATGG-CGCGTT--GAA-ACA--CCGAAACAGCACATTGTCGTATAACCATGACGTTCTAACCTAAAAA-CTGATGAAATTTC-CAAGTCCAGTCGGCTTT-------------------------------------C-T--ATTTACATAT----AT--AGTTTG---------------T--A----------------GAACAGTAA-------------------CTAAATA-CATT-TC--TTTT--TT-TTAT---T---------------CC-AA--GGATAATGGCTGCTCAGTTCTTTAATCGCATTGGCCAAATGGGCCTTGGAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTAATCGCATTGGCCAAATGGGC.......2611.00101000000000
..................................................................................................................................................................AACAGCACATTGTCGTATAACCAT..............................................................................................................................................................................................................................................................................................2411.00100000010000
............AATAATTTGATTTAATTGCAACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
droEug1
GCGAAATTGCACAATAATTTAATCAAATTTTAAACAA-TAA---------GCTTTAATAAGTAAGTGTG-AAAGTAAGC------------------------CGACCAAAATAGATTGAAAAC-CCGTT-TGA--ATTT-GGGATA--AAA-ACG--CATAAACAGCACGTTGTTTTATAGACATGACGTTCTAACCTAAAAA-CTGATGAAATT-C-CAAGTCCAGTCGGCTTTT------------------------------------T-T--ATTTACATAT----AT--TATTTA---------------T--AA------------------GAGTAA-------------------CTAAATA-TTTT-AT---TTT--TG-TTTT---T---------------CC-AA--AGATAATGGCTGCTCAGTTCTTTAATCGTATTGGCCAGATGGGCCTCGGAGSizeHit CountTotal NormTotal
No Reads
droBia1
GCAAAATTGCACAATAATTCAATTTAATTGAAACCAA-AAA---------GCTTTAACAAGTAAGTTTG-CAGGAGGCC------------------------CAACCTTTCTGCATTGGAAGA-CCCAC-TGA--ACTG-GTTATA--AAA-ACA--CATAAACAGCACGTTGTGCCCTGGTCATGACGATCTAACCTAAAAAGCTGATGAAATTTC-CAAGTCCAGTCGGCTTT-------------------------------------T-T--ATTTACATAC----AT--AG-TTG---------------T--AG----------------GACAGTGA-------------------CTAAATA-CCTT-AC--GTTT--TGTTCTT---T---------------CC-GT--AGATAATGGCTGCTCAGTTCTTCAATCGCATCGGCCAAATGGGCCTTGGAGSizeHit CountTotal NormTotal
No Reads
droTak1
GCA-AATTGCACAATAATTTGAATTAATTCAAACTAA-AAA---------GCTTTAATAAGTAAGTGTA-AGAGTGGGC------------------------TGAGCAAACTGCATTGGAGAC-CCCAC-TGA--GCCA-GCTTTA--AAA-ACA--CAAAAACAGCACGTTC-CATCTAATCATGACGTTCTAACCTAAAAAGCTGATGAAATTTC-CAAGTCCAGTCGGCTTT-------------------------------------T-T--ATTTACATAT----AT--AG-TTA---------------T--AA---------------GATAACTAA-------------------ATAAATA-CTTT-TC--GTTT--TG-TT-CT--C---------------AA-AT--AGATAATGGCTGCTCAGTTCTTCAATCGCATTGGCCAAATGGGCCTTGGAGSizeHit CountTotal NormTotal
No Reads
droEle1
GCAAAATTGCACAATAATTTGATTTAATTGAAACCAA-AAA---------GCTTAAATAAGTAAGTTTA-AATGCAGAC------------------------CGACGAAATTGCATTGGAATA-CCACT-CGA--AATG-GGCATA--AAA-ACA--CATAAACAGCACGTTGTCTGCCAGCCATGACGTTCTAACCTAAAAAACTAATGAAATTTCCCAAGTCCAGTCGGCTTT-------------------------------------T-T--ATTTACATATGTATAT--A-GATA---------------T--AA----------------GACAGTAA-------------------CTGAATA-CTTT-AC--GTTT--GGTTCTT---C---------------CC-AA--AGATAATGGCTGCTCAGTTCTTCAATCGAATTGGCCAAATGGGCCTCGGTGSizeHit CountTotal NormTotal
No Reads
droRho1
GCAAAATTGCACAATAATTTGATTTAATTAAAACCAA-AAA---------GCTTTAATAAGTAAGTTTT-CAATCAGGC------------------------TGACTAAACTGCATTGGAAAT-CCCCG-AGA--AATG-GGTGTA--AAA-TCA--CATAAACAGCACGTTGTCGGCTAGAAGTGACGTTCTAACCTAAAAAACTGATGAAATTTCCAAAGTCCAGTCGGCTTT-------------------------------------T-T--ATTTACATAT----AT--A-TTTA---------------T--AA----------------GACAGTAA-------------------CTATATA-CTTT-CC--GTTC--TGTTGAT---T---------------CC-AA--AGATAATGGCTGCTCAGTTCTTCAACCGCATTGGCCAATTGGGCCTCGGAGSizeHit CountTotal NormTotal
No Reads
droFic1
GCAAAATTGCACAATAATTTCGTTTAATTGAAACCAA-AAA---------GCTTTAATAAGTAAGTATTAAATGTTGGC------------------------AGTGG-AAATCCGTGGAAGAA-ACACT-TGA--TTTT-TGGATA--AAC-ACA--CATAAACAGCACGTTGTCGGCTAGCCATGACGTTCTAACCTAAAAAACTGACGAAATTTATCAAGTCAAGTCGGCTTT-------------------------------------T-T--ATTTACATAT----A----ACCCA---------------T--AA----------------GATAAT-A-------------------CTTAATA-CTTT-TC--GTTT--TG-TTTC---T---------------TT-GA--AGGTAATGGCTGCTCAGTTCTTCAACCGCATTGGCCAAATGGGCCTTGGCGSizeHit CountTotal NormTotal
No Reads
droKik1
GCAAAATTGCACAATATTCTGATTTAATTTAACTCAA-ACA---------GCTTTAATTAGTAAGTGTT-TAAGCGCAC------------------------AGATTGGGTTTTACAAGAAAT-CCCTT-TCA--ATTA-CACCGA--AAA-TCA--TGTAAACATCACGTTGTCGGGCAGCAATGACGTTCTAACCTAAAAATCTGACGAAATTGC-TTAATCCAGTCGGCTTT-------------------------------------T-T--ATTTATGTGTA---GA--AGTCTA---------------TTGAA----------------GACACCAA-------------------CTGATTA-ATTCCATTTGTTT--T--TTATT--T-------------AACC-ACAGACACAATGGCTGCTCAATTCTTCAATCGCATCGGCCAGCTTGGTCTTGGAGSizeHit CountTotal NormTotal
No Reads
droAna3
GCA--ATTGCACAATAATTTAAGAGTTTTAACAATAA-AAA---------GCTTTAAAAAGTAAGTGAT-TGAGGATAT-----------------------TAGTG-GCCTTTAATTGAAATG-A-AGT-TGCTAAGT--GTATTA--AAA-ACA--CACAAACAGCACGTTGTCGGCCAAGAGTGACGGCCTAACCTAAAAAGCTGGTGAAATATT-GTAATCCAGTCGGCTTT-------------------------------------T-T--ATTTACATGTT---AT--A-GATA---------------T--AG-GT-----GT--TA-GCGTACTAA-------------------TATATCA-TTTT-CTTTGTT------TTATCC-A---------------CC-AC--AGACAATGGCTGCTCAGTTCTTCAATCGCATCGGTCAGTTGGGCCTTGGCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGGTCAGTTGGGCCTTGGC.2112.002011000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCTGCTCAGTTCTTCAATCGCATC...................2711.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCTGCTCAGTTCTTCAATCGCATC...................2811.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGCTCAGTTCTTCAATCGCATCGGC................2811.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGCATCGGTCAGTTGGGCCTTGGC.2711.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGCATCGGTCAGTTGGGCC......2211.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAGTTCTTCAATCGCATCGGT................2411.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCAGTTGGGCCTTGGCG1911.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATCGCATCGGTCAGTTGGGCCT.....2511.001001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATCGGTCAGTTGGGCCT.....2011.001000010
droBip1
GCA--ATTGCACAATAATTTAAGAGTTTTACCAATAA-AAA---------GCTTTAAAAAGTAAGTGAT-TGAGGATAT-----------------------CAGTG-GCGTTTAATTGAAATA-CACGTCCCA--AGT--GGGTTA--AAA-ACC--CACAAACAGCACGTTGTCGGCAAAGAATGACGGCCTAACCTAAAAAGCTGATGAAATATT-GTAATCCAGTCGGCTTT-------------------------------------T-T--ATTTACATGTT---AT--A-GATA---------------T--AG-GT-----GT--TT-GCATACTAA-------------------TAGATCA-TTTT-TATTGTT------TTACTC-A---------------CC-AC--AGACAATGGCTGCTCAGTTCTTCAATCGCATCGGTCAGTTGGGCCTTGGCGSizeHit CountTotal NormTotal
No Reads
dp5
G---------------------------------------------------------------------------------------------------------------------------------------------GCATA--AAA-ACA--TGAACACTGCACGTTGTCGGCCAACTATGACGATCTAACCTAAAAAGTTGATGAAATTGA-TAAGTCTAGTCGGCTTT-------------------------------------T-T--ATTTACATAC----ATATA-GAAA---------------T--AA-ATACATAGT--TAGGCACATTAA-------------------GCCAATA-ATTT-CC--TTCT--TA-CTTT---C---------------GC-AC--AGACTATGGCTGCCCAGTTTTTCAATCGCATTGGCCAGATGGGCCTCGGAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCAGATGGGCCTCGGAG2012.0020200000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGCATTGGCCAGATGGGC.......2112.0020200000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATCGCATTGGCCAGATGGGCCTC....2611.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGGCTGCCCAGTTTTTC............................2011.0010010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTTTTTCAATCGCATTGGC................2211.0010000100000
........................................................................................................................................................................................................................................................................................................................................................................................T-CC--TTCT--TA-CTTT---C---------------GC-AC--AG.................................................2011.0010000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGCATTGGCCAGATGGG........2011.0010100000000
droPer2
G---------------------------------------------------------------------------------------------------------------------------------------------GCATA--AAA-ACA--TGAACACTGCACGTTGTCGGCCAACTATGACGATCTAACCTAAAAAGTTGATGAAATTGA-TAAGTCTAGTCGGCTTT-------------------------------------T-T--ATTTACATAC----ATATA-GAAA---------------T--AA-ATACATAGT--TAGGCACATTAA-------------------GCCAATA-ATTT-TC--TTCT--TA-CTTT---C---------------GC-AC--AGACTATGGCTGCCCAGTTTTTCAATCGCATTGGCCAGATGGGCCTCGGAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGCATTGGCCAGATGGGC.......2113.003300000
.............................................................................................................................................................................................................................................................................................................................................................................GCCAATA-ATTT-TC--TTCT--TA-CTTT---..........................................................................2312.002200000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTTTTCAATCGCATTGGC................2112.002200000
.....................................................................................................................................................................................................................ATTGA-TAAGTCTAGTCGGCT..............................................................................................................................................................................................................................................2011.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCAATCGCATTGGC................1811.001100000
................................................................................................................................................................................................................................................................................................................................................................................................CT--TA-CTTT---C---------------GC-AC--AGACT..............................................1811.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAATCGCATTGGCCAGATG..........2311.001100000
droWil2
TTTTGA------------------ATTTTA--CATAATAAAGTCTTATTCGTTGTAAATAGTAAGTGGT-AAAAAGTTA---------AGA------GTAT--TTTCCTAACTTAGTTAGCAAAGTGTAG-TGT--CAAATTTATTACAAAAATTAAAT-GA-------AATTGACATTTCGT-CTGACGTTCTAACCTAAAAACCTGATGAAATCTC-TC------------------GCAGACACACACACACAGATACACAGTCGGCTTTTTTCTATTCATATGG----AT--AA-CTTTGGACTCGCTAAATATTAAA---------------------T-A-------------------TATAAAA-TATT-TT--GTAA--TA-TCATTTTTCAACGTTAGAAAGGACC-AC--AAAAAATGGCTGCTCAGTTCTTCAATCGTATTGGCCAGATGGGTCTCGGAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCAATCGTATTGGCCAGATGGGTC......2713.00303000
....................................ATAAAGTCTTATTCGTTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200020
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCAATCGTATTGGCCAGATGGG........2512.00202000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTCAATCGTATTGGCCAGATGGGT.......2812.00200020
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTATTGGCCAGATGGGT.......1812.00200020
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCTTCAATCGTATTGGCCAGA............2512.00200020
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGTATTGGCCAGATGGGT.......2112.00200020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTCAATCGTATTGGC................1911.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTATTGGCCAGATGGGT.......2011.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGTTCTTCAATCGTATT...................2011.00100010
.......................................................................................................................................................................................................................................................................................TTCATATGG----AT--AA-CTTTGGACT....................................................................................................................................................................2211.00110000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCAGTTCTTCAATCGT......................1911.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTCAGTTCTTCAATC........................1911.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................ACC-AC--AAAAAATGGCTGCTCA...................................2111.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCAGTTCTTCAATCGTATT...................2211.00100010
...............................................................................................................................................................................CATTTCGT-CTGACGTTCTA.....................................................................................................................................................................................................................................................................................1911.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTGGCCAGATGGGTCTCGGA.2311.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................GACC-AC--AAAAAATGGCTGCTCA...................................2211.00100010
.........................................................ATAGTAAGTGGT-AAAAAGTTA---------AGA------.......................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTGGCCAGATGGGTCTCG...2111.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTGCTCAGTTCTTCAATCGTAT....................2511.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCTTCAATCGTATTGGC................2111.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCGTATTGGCCAGATGGGT.......2211.00100100
...........................................................................GTTA---------AGA------GTAT--TTTCCTAA.........................................................................................................................................................................................................................................................................................................................................................................1911.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAGTTCTTCAATCGTATTGGC................2411.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCAATCGTATTGGCC...............1811.00110000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATCGTATTGGCCAGATGGGTCT.....2511.00101000
..........................................................................................................................................................................................................................................................................................ATATGG----AT--AA-CTTTGGACTCGCT................................................................................................................................................................2311.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGCTCAGTTCTTCAATCGT......................2211.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAATCGTATTGGCCAGATGGGT.......2511.00100010
....................................ATAAAGTCTTATTCGTTGTAAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCTTCAATCGTATTGGC................2011.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAATCGTATTGGCCAGATGGGT.......2411.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTGCTCAGTTCTTCAATCGTATT...................2611.00101000
........................................................................................................................................................................................................................................................................................TCATATGG----AT--AA-CTTTGGACTCGC.................................................................................................................................................................2411.00110000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGCTCAGTTCTTCAATCGTAT....................2411.00101000
.......................................AAGTCTTATTCGTTGTAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.......................................AAGTCTTATTCGTTGTAA...............................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATCGTATTGGCCAGATGGGT.......2311.00100010
............................................................GTAAGTGGT-AAAAAGTTA---------AGA------GT.....................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTCAATCGTATTGGCC...............2011.00110000
.............................................................................................................AACTTAGTTAGCAAAGTGTAG-TGT--C...............................................................................................................................................................................................................................................................................................................................................2511.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCAATCGTATTGGCCAGATGGGT.......2611.00101000
...................................AATAAAGTCTTATTCGTTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
......................................AAAGTCTTATTCGTTGTAAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATCGTATTGGCCAGATGGGTCTCG...2711.00101000
................................................................GTGGT-AAAAAGTTA---------AGA------G......................................................................................................................................................................................................................................................................................................................................................................................1811.00100001
.........................................................................................................................................................................................................................................................................................................................................................................................................................AAGGACC-AC--AAAAAATGGCT........................................2011.00100010
......................................AAAGTCTTATTCGTTGTAA...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCAGTTCTTCAATCGTATTGGCCA..............2711.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCAATCGTATTGGCCAGATGGGT.......2711.00100010
...................................AATAAAGTCTTATTCGTTGTAA...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGTATTGGCCAGATGG.........1911.00100010
......................................................................................................................AGCAAAGTGTAG-TGT--CAAATTT.........................................................................................................................................................................................................................................................................................................................................2211.00100010
droVir3
GCGATTTTGTGCAATTATAACGT--TATTA----------A---------ACATT--TAAGTAAGCGCA-CAAATAAATATAAAGTTAGTAAAACCAGTTCACTGTAAACACGGCTATGAAAAAGTACAT-TGT--GCACTTTAATA--AGA-GCA--CATACGGTGCACTTTGC-GACTTTACATGACGTTCTAACCTACAAATCTGACGAAATACA-CA-ACTTAGTCGGCTTTC-GGT--------------------------------T-C--ATTTACATAA----AC-----ACA---------------CAAT--------------ATACACATTGAATTTATAACTTATCTAAAACTACATAATTTT-TT--GT----TG-TTAT---T--------------CTT-AA--GAAAAATGGCTGCTCAGTTCTTTAATCGTATTGGCCAAATGGGTCTCGGCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTCAGTTCTTTAATC........................1813.003000000000000000000000000000000000000000000000000000000000000003
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTAATCGTATTGGCC...............1812.002020000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AA--GAAAAATGGCTGCTCAGTT................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................ACCTACAAATCTGACGAAATA................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCCAAATGGGTCTCGGC.2111.001000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGTATTGGCCAAATGGGTCTCGGC.2711.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGCTCAGTTCTTTAATCGT......................2211.001000000000100000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGTATTGGCCAAATGGG........2011.001000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTATTGGCCAAATGGGTCTC....2311.001001000000000000000000000000000000000000000000000000000000000000
.......TGTGCAATTATAACGT--TATTA----------................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TT-AA--GAAAAATGGCTGCTCAGTTCT..............................2511.001000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATGGCTGCTCAGTTCTTTAATC........................2611.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTATTGGCCAAATGGGTCTCGGC.2411.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCTTTAATCGTATTGGCC...............2111.001000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTATTGGCCAAATGGGT.......2011.001000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTAATCGTATTGGCCAAATGGG........2511.001000000000000000000000001000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGGCTGCTCAGTTCTTTAATC........................2511.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTAATCGTATTGGCCAAATGGGTCTC....2811.001000000000000000000000000000000000000000000000000000000000001000
.............................A----------A---------ACATT--TAAGTAAGCGCA-CA................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000010000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCTGCTCAGTTCTTTAATCGT......................2511.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................................................CATAATTTT-TT--GT----TG-.................................................................................1560.171000000000000000000000000000000000000000000000010000000000000000
droMoj3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGACGTTCTAACCTATAAATCTGATGAAATGT--GAAACTGAGTCGGCTTTCC-AATGATTTACATAAACATATACAC-------------------------------------AA---------------T--AG-ACATTTACT--AATTTATATAAA-------------------CTGTATAATTTT-CT--GTTT--TTGTGTT---T---------------TT-AA--GTATAATGGCTGCTCAGTTCTTTAACCGCATTGGCCAAATGGGTCTTGGCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................AAATCTGATGAAATGT--GAAACTGAGT...................................................................................................................................................................................................................................................261242.002428122512527
.........................................................................................................................................................................................................AAATCTGATGAAATGT--GAAACTGAGTC..................................................................................................................................................................................................................................................27130.00304001250
.........................................................................................................................................................................................................AAATCTGATGAAATGT--GAAACTGAGC...................................................................................................................................................................................................................................................26129.00291000280
........................................................................................................................................................................................................TAAATCTGATGAAATGT--GAAACTGAGT...................................................................................................................................................................................................................................................2716.006200031
..........................................................................................................................................................................................................AATCTGATGAAATGT--GAAACTGAGT...................................................................................................................................................................................................................................................2513.003300000
.........................................................................................................................................................................................................AAATCTGATGAAATGT--GAAACTGAGTCG.................................................................................................................................................................................................................................................2812.002000011
.............................................................................................................................................................................................................CTGATGAAATGT--GAAACTGAGT...................................................................................................................................................................................................................................................2212.002000020
...........................................................................................................................................................................................................ATCTGATGAAATGT--GAAACTGAGT...................................................................................................................................................................................................................................................2412.002100010
............................................................................................................................................................................................................TCTGATGAAATGT--GAAACTGAGTC..................................................................................................................................................................................................................................................2411.001100000
...........................................................................................................................................................................................................ATCTGATGAAATGT--GAAACTGAGTC..................................................................................................................................................................................................................................................2511.001000010
.....................................................................................................................................................................................................CTATAAATCTGATGAAATGT--G............................................................................................................................................................................................................................................................2111.001000100
.........................................................................................................................................................................................................AAATCTGATGAAATGT--GAAACTGAG....................................................................................................................................................................................................................................................2511.001000010
........................................................................................................................................................................................................TAAATCTGATGAAATGT--GAAACTGAGTC..................................................................................................................................................................................................................................................2811.001000010
...........................................................................................................................................................................................................ATCTGATGAAATGT--GAAACTGAGTCG.................................................................................................................................................................................................................................................2611.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCTTTAACCGCATTGGCCAA.............2411.001100000
.........................................................................................................................................................................................................AAATCTGATGAAATGT--GAAACTGAGTT..................................................................................................................................................................................................................................................2711.001000010
...............................................................................................................................................................................................................GATGAAATGT--GAAACTGAGT...................................................................................................................................................................................................................................................2011.001000100
.........................................................................................................................................................................................................AAATCTGATGAAATGT--GAAAC........................................................................................................................................................................................................................................................2111.001000010
droGri2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGACTTTCTAACCTACAAATCTGACGAAATACA-AAAACCCAGTCGGCATTTCAGT--------------------------------T-C--ATTTACATAA----AC-----ATA---------------CAAAATACACCCATAAATTTACATCTAAA------------------GCTGCATAGTTTT-TCTTGTGTTATTTTTTT---C---------------TT-GT--AGATAATGGCTGCGCAATTCTTTAATCGTATTGGCCAAATGGGTCTCGGCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 05:44 AM