ID:

dsi_23492

 Coordinate:

3r:15133514-15133663 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.9 -35.7 -35.7

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CTTGCTCGACCCCTGCACCCACCCACCACCACCACCCACTTGGGCACGAAGTGGGCAAGGGGAAGGAGGAGATTTCGTTGATTTTTGCATGACGACAGCAAAAAGCGAAAAGGCGGAACAACAATCGAAATGCAACTGCACGGGTGTGTGGGTGTGCGAGCAAGGCAGCCTATGTGAACCAGACATGCGCGCTCTCTCTCAGCGACTTGAACTTGAAAACTTTTTACTGCCGGCAAAACGAAAGAGAGCT
**************************************************..............(((((((.((((((...(((((((.((....)))))))))))))))..((((...................)))).((.((((((.(((..(((.((......))...)))..)))..)))))).))))).)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
.................................................................................................................................................................................................CTCTCTCAGCGACTTGAACTTGAAA................................ 25 0 1 2.00 2 0 2 0 0 0 0 0 0
.................................................................................................................CGGAACAACAATCGAAATG...................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0
...................................................................................................AAAAAGCGAAAAGGCGGAAC................................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TACTGCCGGCAAACTGAAAGACA... 23 3 1 1.00 1 0 0 0 1 0 0 0 0
.................................................AGTGGGCAAGGGGAAGGAGGAGA.................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 1 0 0 0
.....................................................................................................AAAGCGAAAAGGCGGAAC................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................CTCTCAGCGACTTGAACTTGAAAACT............................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0
.................................................................GAGGAGATTTCGTCTATT....................................................................................................................................................................... 18 2 2 0.50 1 0 0 0 0 0 1 0 0
..............................................................................................................................................................AGCAAGGAAGCCAATGTGAAC....................................................................... 21 2 2 0.50 1 0 0 0 0 0 0 1 0
........................................TGGGAACGAAGTGGG................................................................................................................................................................................................... 15 1 14 0.07 1 0 0 0 0 0 1 0 0
...................................................................GGAGATTTTGTTGAT........................................................................................................................................................................ 15 1 20 0.05 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

GAACGAGCTGGGGACGTGGGTGGGTGGTGGTGGTGGGTGAACCCGTGCTTCACCCGTTCCCCTTCCTCCTCTAAAGCAACTAAAAACGTACTGCTGTCGTTTTTCGCTTTTCCGCCTTGTTGTTAGCTTTACGTTGACGTGCCCACACACCCACACGCTCGTTCCGTCGGATACACTTGGTCTGTACGCGCGAGAGAGAGTCGCTGAACTTGAACTTTTGAAAAATGACGGCCGTTTTGCTTTCTCTCGA
**************************************************..............(((((((.((((((...(((((((.((....)))))))))))))))..((((...................)))).((.((((((.(((..(((.((......))...)))..)))..)))))).))))).)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
.......................................................................................................................TTGTTAGCTTTACGTTGACGT.............................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0
................TGGGTGGGTGGTGGTGGTGG...................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................................................................................GTTTTGCTTTATCTCGA 17 1 3 0.33 1 0 0 1 0 0 0
....GAGCTGGGAACGTGGG...................................................................................................................................................................................................................................... 16 1 3 0.33 1 0 0 1 0 0 0
.......................................................................................................................................................................................................................................CCGTTTTGCTTTCTCCC.. 17 1 4 0.25 1 0 0 0 1 0 0
...............GTGGGTGGGTGGTGGTG.......................................................................................................................................................................................................................... 17 0 8 0.25 2 2 0 0 0 0 0
...........................TGGTGGTGGGTGACCCCG............................................................................................................................................................................................................. 18 1 5 0.20 1 1 0 0 0 0 0
...............GTGGGTGGGTGGTGGTGG......................................................................................................................................................................................................................... 18 0 5 0.20 1 1 0 0 0 0 0
.....................GGGTGGTGGTGGTGGGTG................................................................................................................................................................................................................... 18 0 7 0.14 1 1 0 0 0 0 0
.............AGGTGGGTGGGTGGTGGTG.......................................................................................................................................................................................................................... 19 1 8 0.13 1 1 0 0 0 0 0
.............................................................................................................................................................................................GCTATAGAGAGTCGCTG............................................ 17 2 9 0.11 1 1 0 0 0 0 0
................TGGGTGGGTGGTGGTG.......................................................................................................................................................................................................................... 16 0 9 0.11 1 1 0 0 0 0 0
................AGAGTGGGAGGTGGTGGTGGGTG................................................................................................................................................................................................................... 23 3 10 0.10 1 0 0 0 0 1 0
.......................................................................................................................................................................................................................................CCGTCTTGCTTTCTC.... 15 1 20 0.10 2 0 0 0 2 0 0
...............................................................................................................................................................................................GAGAGTGACTCGCTGTACT........................................ 19 3 11 0.09 1 0 0 0 0 0 1
.................GGGTGGGTGGTGGTG.......................................................................................................................................................................................................................... 15 0 19 0.05 1 1 0 0 0 0 0
...........................TGGTGGTGGGAGAAC................................................................................................................................................................................................................ 15 1 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................CCGTCTTGCTTTCTCCC.. 17 2 20 0.05 1 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:15133464-15133713 - dsi_23492 CTTGCTCGACCCCTGCACCCACCCA---CCAC-CACCACCCACTTGG----------------------------------------------------------GCA-------------CGAA---GTGGG-----------------CAAGGGGAAGGAGG------------AGATTTC---GTTGA-TTTTTGCATGACGACAGCAAAAAGCGAAAAGGCGG----------------AAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------GG------G--------TGTGT--GGGTGTGCG----------------AGCAAGGCAGCCT-------------ATGTGAACCA-GACATGCGCGCT--CTCT---CTCAGC--GACTTGAACTTGAAAACT--TTTTACTGC----------------------------------------------------------------------------CGGCAAAA---C--GAAAGAGA--------------GCT
droSec2 scaffold_0:15998412-15998654 - CTTGCTCGGCCCCTGCAGCCATCCA------C-CACCACCCACTGGG----------------------------------------------------------CCA-------------CGAT---GAG-----------------------GGGAAGGAGG------------AGATTTC---GTTGA-TTTTTGCATGACGACAGCAAAAAGCGAAAAGGCGG----------------AAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------GG------T--------TGTGT--GGGTGTGCG----------------AGCGAGGCAGCCT-------------ATGTGAACCA-GACATGCGCGCT--CTCT---CTCAGC--GACTTGAACTTGAAAACT--TTTTACTGC----------------------------------------------------------------------------CGGCAAAA---CAAGAGAGAGA--------------ACG
dm3 chr3R:5914885-5915131 + CTTGCCCGACCCCTGCAGCCACCCA------C-CACCACCCACCGCG----------------------------------------------------------GCA-------------CGAT---GAGGG-----------------CAAGGGGATGGAGG------------AGATTTC---GTTGA-TTTTTGCATGACGACAGCAAAAAGCGAAAATGCGG----------------AAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------GG------G--------TGTGT--TGGTGTGCG----------------AGCGAGTCAGCCT-------------ATATGAACCA-GACATGCGCGCT--CTCT---CTTATC--GACTTGAACTTGAAAACT--TTTTACTGC----------------------------------------------------------------------------CGGCAAAA---C--GAGAGAGA--------------GCG
droEre2 scaffold_4770:15685251-15685498 - ATGACCCACCCCCTGCAGCCACCCA------C-AACCACCCAGTGGG----------------------------------------------------------CCACGCGATGGGGCCA-----G---------------------------GGGGAGGAGG------------AGGTTTC---GTTGA-TTTTTGCATGACGACAGCAAAAAGCGAAAAGGCGA----------------AAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------GA------A--------TGTGT--GGGTGTGCG----------------AGCGAAGCAGCCT-------------ATCTGAACCA-GACATGCGCTCT--CTCT---CTCACC--GACTTGAACTTGAAAATT--TTTTAGTGC----------------------------------------------------------------------------CGGCAAAA---C--GAGAGAGA--------------GCG
droYak3 3R:9962042-9962300 + CTGACCCGCCGCCTGCAGCCACCCACCACCAC-CACCACCCACTGGG----------------------------------------------------------CCACCCGAGCGGGCC-----AGAGG------------------------GGGTAAAAGG------------AGATTTC---GTTGA-TTTTTGCATGACGACAGCAAAAAGCGAAAAGGCGG----------------AAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------GG------G------AGTGTGT--GGGTGCGCG----------------AGCGAGGCAGCCT-------------ATCTGAACCA-GACATGCGCTCT--CGCT---CTCAGC--GACTTGAACTTGAAAACT--TTTTACTGC----------------------------------------------------------------------------CGGCAAAA---C--GAGAGAGA--------------GCG
droEug1 scf7180000409470:247773-248006 + CTTGCAAAAT------------------------ACCACCCACCAAA----------------------------------------------------------GGA--------------GAA---GAAGA-----------------AAAGTGGGTTGAGG------------AGATTTC---GTTGA-TTTTTGCATGACGACAGCAAAAAGCGAAAAGGCGG---------------AAAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------AA------G--------TGTGTGGGTGTGTGGG----------------AGCAGGACAGACT-------------ATATAATACA-GACATGCGCTCCCTCTCT---CTCAGC--GACTTGAACTTGAAAACT--TTTTACTGC----------------------------------------------------------------------------CGGCAAAT---T--GAAAGAGA--------------GAG
droBia1 scf7180000302402:3411639-3411854 + CTGGCAGCACCC-ACCACC----CA---CCACCCACCGCCCACC--------------------------------------------------------------------------------------------------------------------------------------GCTTC---GTTGA-TTTTTGCATGACGACAGCAAA-AGCGAAAAGGCGG----------------AAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------GC------C------TGAGTGT--GGGTGTGCG----------------AGCGAGGCAGCCT-------------GTGCGA-GCA-GACATGCGCTCT--CTCGCGGCGCAGC--GACTTGAACTTGAAAACG--TTTTACCGC----------------------------------------------------------------------------CGGCTAAA---T--GGGAGAGG----------------G
droTak1 scf7180000415245:191010-191247 - CG------CCCCCCGCAACC-----------------ACCCAGC--G------------------------------------------------------------------------------AAAGGAGGTGGGAGGTAAATGGAA-----AGGGGTGGTG------------CGATTTC---GTTGA-TTTTTGCATGACGACAGCAAAAAGCGAAAAGGCGG----------------AAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------GA------G--------AGTGT--GGGTGTGCG----------------AGCGAGGCAGCCT-------------GTATGAAGCA-GACATGCGCTCT--CTCTCGGCGCAGC--GACTTGAACTTGAAAACT--TTTTACTGC----------------------------------------------------------------------------CGTCAAAA---C--GAGAGAGA----------------G
droEle1 scf7180000490967:815745-815982 - CTGACCCGCCCTCTAAATTCACCCA------CCCACATCCCACTCGG----------------------------------------------------------TC------------GA----AAAG-------------------------GGGG--TGGG------------AGATTTC---GTTGA-TTTTTGCATGACGACAGCAAAAAGCGAAAAGGCGG----------------AAC------AACAATCGAAATGC-AACTGAAC---------------------------------------------------------------GT------G------CGTGTGT--TGGTGTGCA----------------AGCGAGGCGGCCT-------------ATATACAGCA-GACATGCGCTCT--CA-----CTCAGA--GACTTGAACTTGAAAACT--CTTTACTGC----------------------------------------------------------------------------CGGCAAAA---A--TCGAGAGA--------------AAC
droRho1 scf7180000779228:14060-14287 + CTGCCCCGACCCCC---------CAAAACCACCCACCACCCACTCGA----------------------------------------------------------C------------------------------------------------AGAAAAGGGG------------AGATTTC---GTTGA-CTTTTGCATGACGACAGCAAAAAGCGAAAAGGCGG----------------AAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------GA------G--------TGTGT--GGGTGTGCG----------------AGCGAGGCGGCCT-------------ACATAAAGTA-GACATGCGCTCT--CG-----CTCAGC--GACTTGAACTTGAAAACT--CTTTACTGC----------------------------------------------------------------------------CGGCAAAA---A--ACGAGAGA--------------GAT
droFic1 scf7180000454104:913125-913352 - CCGGCGGAACCCC----------CA------C-CA-CGCCCACTTGG------------------------------------------------------------------------------------------------------------AGAGAGGGG------------AGATTTC---GTTGA-TTTTTGCATGACGACAGCAAAAAGCGAAAAGGCGG----------------AAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------GC------G------TGTGTGT--GGGTGAGCG----------------AGCGAGGAGGCCT-------------GTATTAAGCA-GACATGCGCTCT--TG-----CTCAGC--GACTTGAACTTGAAAACT--TTTTACTGC----------------------------------------------------------------------------CGGCAAAA---A--AAAA-TGTGAGTGGGAG----AGCG
droKik1 scf7180000302706:2166437-2166705 + CAGCCCCGCCCCCT----------------------------CTGGA------------------------------------------------------------A-------------CGAA---GGGGGTAAGAAATGGG-----------CGGAAGGCG------------AAATTTC---GTTGA-TTTCTGCATGACGACAGCAAAAAGCGAAAAGGCGAAAGGAAACGA-GAAACAACAACAACAATAGTCGGAGTGC-AGC------GCACA--CACACACAAACGCCCACACATTGCA-CT--------------GCTGCTG--------------C--------TGCAT--AGGAGT--G----------------AACGAGAAGGCGA-------------ACATGGCGCG-GACATGCGCTCT--CGCT-------------CTTGAACTTGAAAAC----------------------------------------------------------------------------------------CGGCAAACGAAC--GAGAGAGG-------AG----AGCG
droAna3 scaffold_13340:6478368-6478646 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTT---GTTGATTTTTTGCATGACGACAGCAAAAAGC-AAGAGGCGG----------------AAC------AACAAACGAAG--CAAAGTGCACCACAATACC--------------TCACACTGCATCT--------------------GC-----GGGTGTGCGGGTGTGCGTGTGT--GGGTGAGTG--------AGAGTATG-------------TGCGAGCAAACAAATATGGCGCA-GACATGCGCACT--CT-----GCCACC--AACTTGAACTTGAAAACT---TTTACTGC------------------CGCCGTCGCCGTCGCCGCCGCTGCCCTTTCCAACAGCGACGTCGACAGCGCAGCCAACCGGCAAAC------CAGAGAGA------G-------ACT
droBip1 scf7180000396708:2370618-2370907 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT---GTTGA-TTTTTGCATGACGACAGCAAA-AGCCAAGAGGCGG----------------AAC------AACAAACGAAG--CAAAGTGCACCACAAAACC--------------TCACACTGCATCT-------CG---------CTGCAGGCT-C------G------CGTGTGT--GGGTGAGAG----AGTGAGAGTATG-------------TACGAGCAAACAAATATGGCGCA-GACATGCGCACT--CT-----GCCACC--AACTTGAACTTGAAAACT---TTTACTGCTGCTGCTTCTGCCGCTGTCGCTGTCGCAGTCGCAGTCGCTGCCCATTCCCTTACCGAC---GGCAGCGCAGCCAACCGGCAAAC------CAGAGAGA---------------CT
dp5 2:5031632-5031895 - CAAGCGGGACGCC------------------------A--CGCTGGG----------------------------------------------------------------------TGGA-----G---------------------------AGGGAGGAGGAGCACAAGAAACAAATTTT---GTTGA-TTTTTGCATGACGACAGCAAAAAGCA-AGCGACGA----------------GAA------AACAATG-------------CACCACGGA--C--------------CCACACTGCAACT-------GAG-TTTGTTCGTGC-----GA------G--------TATGTGTGTGTGTGAGAGAGAGGGAGAGCGCG-------------AGCGGACAAACAAATATGGCGCA-GTCATGCGCATT--CT-----CTGAGA--AACTTGAACTTGAAAAC----------------------------------------------------------------------------------------CGGCAAAC---C--GAGAGAGG------GAGAAGCAGCC
droPer2 scaffold_19:737143-737417 - CAAGCGGGACGCC------------------------A--CACTGGG----------------------------------------------------------------------AGTA-----G---------------------------AGGGCGGAGGAGCACAAGAAACAAATTTT---GTTGA-TTTTTGCATGACGACAGCAAAAAGCA-AGCGACGA----------------GAA------AACAATCGAAGTGC-A------CCACGGA--C--------------CCACACTGCAACT-------GGGCTTTGCTCGTGC-----GAGTATGTG--------TGTGT--GTGTGTGTGAGAGAGGGAGAGCGCG-------------AGCGGACAAACAAATATGGCGCA-GTCATGCGCACT--CT-----CTGAGA--AACTTGAACTTGAAAAC----------------------------------------------------------------------------------------CGGCAAAC---C--GAGAGAGG------GAGAAGCAGCC
droWil2 scf2_1100000004902:11181704-11181938 - AAGGA------------------------------------------------------------------------------------------------------------------------------AATAAA-----------------GCATAGGCAA------------AAATTTCAGTGTTGA-TTTTTGCATGACGACAGCAAAAAGCA-GCAGACGA----------------AAG------AGACAGCGATATGG-AAGTGCACCACAGAACC-------------CACACACTGCAATTTCTGGATGAA--TCCCTTGTGT-----ATGTATGTA--------TGTGT--GTGTGTGTG----------------TGTGTGGAG----AACTGGCAAACAAATATGGCGCA-GACCTGCGCACT--GT-----GAGGGC--AACTTGAACTTGAAAATG--TTTT------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12855:2700947-2701039 - AAGAG-----------------------------------------------------------------------------------------------------------------------------------------------G-----AAGAGCCACA------------AAATGTG---TTCAG-CTTTCGCATGACGACAGCAAAAAGCAGCAG--CGACAG---------CGGCAGC------AACAAGAACAATGA-AAGTGCAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:3055058-3055081 + CTGCCTAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA---A--CAGAGAGA--------------GCG
droGri2 scaffold_14624:2250673-2250986 + CACACTCGCCCCT-AC-------------------------ACACGAACAGAAAGGCCTGCGAAATGAAAGTAAACACAAAGAACGAAAAGAAAAAATAAATAAATCATGCGAGCGATTA-CGAT---AAGAG---------------GAAGAGTTGAAAAAAA------------ATGTGTC---CACAA-TTTTCGCATGACGACAGCAAAAAGCAGCAA--CAGCAG---GCAGTACAACAACAACAACGACAATTAAAGTGC-AGTGCTGC-------------------------------------------------------TGCTGCAT-C----------------------GCGTGTGCG----------------AGCGAGAGAGCG-AGCGGGCAAACAAAAATGGCGCATGGCATGCGCACT--GA-----G-CAGCAGAACTTGAACTTGAAAATTGCTTTTATTGT----------------------------------------------------------------------------TG-------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CTTGCTCGACCCCTGCACCCACCCA---CCAC-CACCACCCACTTGG----------------------------------------------------------GCA-------------CGAA---GTGGG-----------------CAAGGGGAAGGAGG------------AGATTTC---GTTGA-TTTTTGCATGACGACAGCAAAAAGCGAAAAGGCGG----------------AAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------GG------G--------TGTGT--GGGTGTGCG----------------AGCAAGGCAGCCT-------------ATGTGAACCA-GACATGCGCGCT--CTCT---CTCAGC--GACTTGAACTTGAAAACT--TTTTACTGC----------------------------------------------------------------------------CGGCAAAA---C--GAAAGAGA--------------GCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCT---CTCAGC--GACTTGAACTTGAAA.................................................................................................................................2512.00202000000000000000
................................................................................................................................................................................................................................CGG----------------AAC------AACAATCGAAATG............................................................................................................................................................................................................................................................................................................................................1912.00220000000000000000
..................................................................................................................................................................................................................AAAAAGCGAAAAGGCGG----------------AAC------.........................................................................................................................................................................................................................................................................................................................................................2012.00220000000000000000
............................................................................................................................A---GTGGG-----------------CAAGGGGAAGGAGG------------AGA..................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000001000
....................................................................................................................................................................................................................AAAGCGAAAAGGCGG----------------AAC------.........................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CT---CTCAGC--GACTTGAACTTGAAAACT--............................................................................................................................2611.00100100000000000000
droSec2
CTTGCTCGGCCCCTGCAGCCATCCA------C-CACCACCCACTGGG----------------------------------------------------------CCA-------------CGAT---GAG-----------------------GGGAAGGAGG------------AGATTTC---GTTGA-TTTTTGCATGACGACAGCAAAAAGCGAAAAGGCGG----------------AAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------GG------T--------TGTGT--GGGTGTGCG----------------AGCGAGGCAGCCT-------------ATGTGAACCA-GACATGCGCGCT--CTCT---CTCAGC--GACTTGAACTTGAAAACT--TTTTACTGC----------------------------------------------------------------------------CGGCAAAA---CAAGAGAGAGA--------------ACGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC--GACTTGAACTTGAAAAC...............................................................................................................................2111.0011000
....................................................................................................................................................................................................TGCATGACGACAGCAAAAAGCGAAAAG......................................................................................................................................................................................................................................................................................................................................................................................2711.0010001
.......................................CCACTGGG----------------------------------------------------------CCA-------------CGAT---GAG-----------------------GG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..........................................................................................................CA-------------CGAT---GAG-----------------------GGGAAGGAGG------------AGA..................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
dm3
CTTGCCCGACCCCTGCAGCCACCCA------C-CACCACCCACCGCG----------------------------------------------------------GCA-------------CGAT---GAGGG-----------------CAAGGGGATGGAGG------------AGATTTC---GTTGA-TTTTTGCATGACGACAGCAAAAAGCGAAAATGCGG----------------AAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------GG------G--------TGTGT--TGGTGTGCG----------------AGCGAGTCAGCCT-------------ATATGAACCA-GACATGCGCGCT--CTCT---CTTATC--GACTTGAACTTGAAAACT--TTTTACTGC----------------------------------------------------------------------------CGGCAAAA---C--GAGAGAGA--------------GCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC--GACTTGAACTTGAAAACT--............................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................GAAAATGCGG----------------AAC------AACAATCG.................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
................................................................................................................................................................................................................................................................................CAC---------------------------------------------------------------GG------G--------TGTGT--TGGTGTGCG----------------A.................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010
............................................................................................................................................................................................................................................................................ACTGCAC---------------------------------------------------------------GG------G--------TGTGT--TGGT.......................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000000000
..................................................................................................................................................................................................................................................................................C---------------------------------------------------------------GG------G--------TGTGT--TGGTGTGCG----------------AG................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
..............................................G----------------------------------------------------------GCA-------------CGAT---GAGGG-----------------CAAGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
.............................................................................................................................................................................................................................................................................CTGCAC---------------------------------------------------------------GG------G--------TGTGT--TGGTGT.....................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CT-------------ATATGAACCA-GACATGCGC....................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CACCGCG----------------------------------------------------------GCA-------------CGAT---GAGGG-----------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................................................................................................................................................................................................................................TGC-AACTGCAC---------------------------------------------------------------GG------G--------TGTGT--TGGTG......................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TGT--TGGTGTGCG----------------AGCGAGTCAGCC......................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................AC---------------------------------------------------------------GG------G--------TGTGT--TGGTGTGCG----------------AGC...............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGCGCT--CTCT---CTTATC--G...............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
........................................................................................................................................................AGGGGATGGAGG------------AGATTTC---GTTGA-T....................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................CCCACCGCG----------------------------------------------------------GCA-------------CGAT---GAGGG-----------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................G------G--------TGTGT--TGGTGTGCG----------------AGCGA.............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................AAATGC-AACTGCAC---------------------------------------------------------------GG------G--------TGT...............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.........................................................................................................................CGAT---GAGGG-----------------CAAGGGGATGGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................TGGAGG------------AGATTTC---GTTGA-TTT..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................AAGCGAAAATGCGG----------------AAC------AAC......................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAAACT--TTTTACTGC----------------------------------------------------------------------------CGGC...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................T--CTCT---CTTATC--GACTTGAACTTGAAAA................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................GAT---GAGGG-----------------CAAGGGGATGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............................................................................................................................................................GATGGAGG------------AGATTTC---GTTGA-TT...................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATC--GACTTGAACTTGAAAACT--TTTTAC......................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................ATGACGACAGCAAAAAGCGAA.........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--GACTTGAACTTGAAAA................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................GCATGACGACAGCAAAAAGCGAA.........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................ATTTC---GTTGA-TTTTTGCATGACG........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................AT---GAGGG-----------------CAAGGGGATGGAGG------------AG...................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................................................................................................................................................................................C---------------------------------------------------------------GG------G--------TGTGT--TGGTGTGCG----------------AGC...............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACCA-GACATGCGCGC..................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................AAAAAGCGAAAATGCGG----------------AAC------.........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACCA-GACATGCGCGCT--CT.............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTGC----------------------------------------------------------------------------CGGCAAAA---C--GAGAGAGA--------------G..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC--GACTTGAACTTGAAAACT--T...........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................T--TGGTGTGCG----------------AGCGAGTCAGC.......................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................GTGCG----------------AGCGAGTCAGCCT-------------ATATG...................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCA-GACATGCGCGCT--CTCT---CTTAT...................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................C------AACAATCGAAATGC-AACTG.....................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...................................................................................................................................................................................................................AAAAGCGAAAATGCGG----------------AAC------AACAATCGAA...............................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................G----------------AAC------AACAATCGAAATGC-AACTGC....................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................AGGG-----------------CAAGGGGATGGAGG------------G....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CCCACCGCG----------------------------------------------------------GCA-------------CGAT---GAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GGTGTGCG----------------AGCGAGTCAGCCT-------------AT......................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................GC-AACTGCAC---------------------------------------------------------------GG------G--------TGTGT--TGG........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
....................................................................................................................................................................................................................AAAGCGAAAATGCGG----------------AAC------AACAATCGAAA..............................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................GT--TGGTGTGCG----------------AGCGAGTCAG........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.....................................................................................................................................................................................................................................................................AATGC-AACTGCAC---------------------------------------------------------------GG------G--------TGTGT--...........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................ACGACAGCAAAAAGCGAAAATGCGG----------------A.................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................ATGC-AACTGCAC---------------------------------------------------------------GG------G--------TGTGT--T..........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGCGCT--CTCT---CTTATC--GAC.............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................ATGC-AACTGCAC---------------------------------------------------------------GG------G--------TGTGT--...........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................GAGGG-----------------CAAGGGGATGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CCGCG----------------------------------------------------------GCA-------------CGAT---GAGGG-----------------CAAGGGGATGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.............................................................................................................................................................................................................................................................................CTGCAC---------------------------------------------------------------GG------G--------TGTGT--TGGTG......................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................AGG------------AGATTTC---GTTGA-TTTTTGCATG...........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................C-AACTGCAC---------------------------------------------------------------GG------G--------TGTGT--TGGT.......................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................ACCA-GACATGCGCGCT--CTCT---CT......................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGAACTTGAAAACT--T...........................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCT---CTTATC--GACTTGAACT......................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................ATGACGACAGCAAAAAGCGT..........................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................................................................................................................................................................................................................................................................................................CGAGTCAGCCT-------------ATATGAACCA-GAC..........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................AAAATGCGG----------------AAC------AACAATCGAA...............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................AC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------GG------G--------..................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TGTGT--TGGTGTGCG----------------AGCGAG............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
................................................................................................................................................................................................................................................................................CAC---------------------------------------------------------------GG------G--------TGTGT--TGGTGTGCG----------------AGCGAGT...........................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
................................................................................................................................GAGGG-----------------CAAGGGGATGGAGG------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAA---C--GAGAGAGA--------------GCC1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATGACCCACCCCCTGCAGCCACCCA------C-AACCACCCAGTGGG----------------------------------------------------------CCACGCGATGGGGCCA-----G---------------------------GGGGAGGAGG------------AGGTTTC---GTTGA-TTTTTGCATGACGACAGCAAAAAGCGAAAAGGCGA----------------AAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------GA------A--------TGTGT--GGGTGTGCG----------------AGCGAAGCAGCCT-------------ATCTGAACCA-GACATGCGCTCT--CTCT---CTCACC--GACTTGAACTTGAAAATT--TTTTAGTGC----------------------------------------------------------------------------CGGCAAAA---C--GAGAGAGA--------------GCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC----------------------------------------------------------------------------CGGCAAAA---C--GAGAGAGA--------------GC.2113.0030000120
......................................................................................................................................................................................................................................................................................................................................................................GT--GGGTGTGCG----------------AGCGAAGC..........................................................................................................................................................................................................1912.0021000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC----------------------------------------------------------------------------CGGCAAAA---C--GAGAGAGA--------------...1911.0010000100
....................................................................................................................................................................................................................AAAGCGAAAAGGCGA----------------AAC------AACA.....................................................................................................................................................................................................................................................................................................................................................2211.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAAATT--TTTTAGTGC----------------------------------------------------------------------------CGGC...................................2211.0011000000
......................................................................................................................................................................................................................................................................ATGC-AACTGCAC---------------------------------------------------------------GA------A--------TGTGT--...........................................................................................................................................................................................................................................2011.0011000000
........................................CAGTGGG----------------------------------------------------------CCACGCGATGGGGCCA-----G---------------------------GG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAACCA-GACATGCGCTCT--CT.............................................................................................................................................................2411.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAAA---C--GAGAGAGA--------------GC.1811.0010000010
....................................................................................................................................................................................................................................................................................................................................................................GTGT--GGGTGTGCG----------------AGCGAAGCAGC.......................................................................................................................................................................................................2411.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGC----------------------------------------------------------------------------CGGCAAAA---C--GAGAGAG..................2111.0010000010
................................................................................................................ATGGGGCCA-----G---------------------------GGGGAGGAGG------------AGGTT................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
.....................................................................................................................................................................................................GCATGACGACAGCAAAAAGC............................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
..................................................................................................................................................................................................................................................................................C---------------------------------------------------------------GA------A--------TGTGT--GGGTGTGCG----------------AGC...............................................................................................................................................................................................................2111.0011000000
....................................................................................................................................................................................................TGCATGACGACAGCAAAAAGC............................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
....................................................................................................................GGCCA-----G---------------------------GGGGAGGAGG------------AGGTTTC---...........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGTGC----------------------------------------------------------------------------CGGCAAAA---C--GAGAGAGA--------------GC.2611.0010000010
.....................................................................................................................................................................................................................................................................AATGC-AACTGCAC---------------------------------------------------------------GA------A--------TGTGT--GGGTG......................................................................................................................................................................................................................................2611.0010000010
droYak3
CTGACCCGCCGCCTGCAGCCACCCACCACCAC-CACCACCCACTGGG----------------------------------------------------------CCACCCGAGCGGGCC-----AGAGG------------------------GGGTAAAAGG------------AGATTTC---GTTGA-TTTTTGCATGACGACAGCAAAAAGCGAAAAGGCGG----------------AAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------GG------G------AGTGTGT--GGGTGCGCG----------------AGCGAGGCAGCCT-------------ATCTGAACCA-GACATGCGCTCT--CGCT---CTCAGC--GACTTGAACTTGAAAACT--TTTTACTGC----------------------------------------------------------------------------CGGCAAAA---C--GAGAGAGA--------------GCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................GG------------------------GGGTAAAAGG------------AGATTTC---...........................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................T-------------ATCTGAACCA-GACATGCGCTCT--CG.............................................................................................................................................................2511.00100000010000
................................................................................................................................................................................................................................................................ATCGAAATGC-AACTGCAC---------------------------------------------------------------GG------G------AGTGTGT--...........................................................................................................................................................................................................................................2811.00100000010000
...............................................................................................................................................................................................................................................................AATCGAAATGC-AACTGCAC---------------------------------------------------------------GG------G------AGTGTGT--...........................................................................................................................................................................................................................................2911.00100000010000
...................................................................................................................................................................................................................................................................................................................................................G------G------AGTGTGT--GGGTGCGCG----------------AGCGAGGCA.........................................................................................................................................................................................................2711.00100000010000
........................................................................................................................................................................................................................................................................GC-AACTGCAC---------------------------------------------------------------GG------G------AGTGTGT--...........................................................................................................................................................................................................................................2011.00100000100000
............................................GGG----------------------------------------------------------CCACCCGAGCGGGCC-----AGAGG------------------------GGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
..................................................................................................................................................................................................................AAAAAGCGAAAAGGCGG----------------AAC------AACAATC..................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
............................................................................................................CCCGAGCGGGCC-----AGAGG------------------------GGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..........................................................................................................................................................................................GTTGA-TTTTTGCATGACGACAGCA..................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.........................................................................................................................................................................................................................GAAAAGGCGG----------------AAC------AACAATCGAAA..............................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.........................................................................................................................................................................................................................GAAAAGGCGG----------------AAC------AACAATCGAAATG............................................................................................................................................................................................................................................................................................................................................2611.00100000010000
droEug1
CTTGCAAAAT------------------------ACCACCCACCAAA----------------------------------------------------------GGA--------------GAA---GAAGA-----------------AAAGTGGGTTGAGG------------AGATTTC---GTTGA-TTTTTGCATGACGACAGCAAAAAGCGAAAAGGCGG---------------AAAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------AA------G--------TGTGTGGGTGTGTGGG----------------AGCAGGACAGACT-------------ATATAATACA-GACATGCGCTCCCTCTCT---CTCAGC--GACTTGAACTTGAAAACT--TTTTACTGC----------------------------------------------------------------------------CGGCAAAT---T--GAAAGAGA--------------GAGSizeHit CountTotal NormTotal
No Reads
droBia1
CTGGCAGCACCC-ACCACC----CA---CCACCCACCGCCCACC--------------------------------------------------------------------------------------------------------------------------------------GCTTC---GTTGA-TTTTTGCATGACGACAGCAAA-AGCGAAAAGGCGG----------------AAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------GC------C------TGAGTGT--GGGTGTGCG----------------AGCGAGGCAGCCT-------------GTGCGA-GCA-GACATGCGCTCT--CTCGCGGCGCAGC--GACTTGAACTTGAAAACG--TTTTACCGC----------------------------------------------------------------------------CGGCTAAA---T--GGGAGAGG----------------GSizeHit CountTotal NormTotal
No Reads
droTak1
CG------CCCCCCGCAACC-----------------ACCCAGC--G------------------------------------------------------------------------------AAAGGAGGTGGGAGGTAAATGGAA-----AGGGGTGGTG------------CGATTTC---GTTGA-TTTTTGCATGACGACAGCAAAAAGCGAAAAGGCGG----------------AAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------GA------G--------AGTGT--GGGTGTGCG----------------AGCGAGGCAGCCT-------------GTATGAAGCA-GACATGCGCTCT--CTCTCGGCGCAGC--GACTTGAACTTGAAAACT--TTTTACTGC----------------------------------------------------------------------------CGTCAAAA---C--GAGAGAGA----------------GSizeHit CountTotal NormTotal
No Reads
droEle1
CTGACCCGCCCTCTAAATTCACCCA------CCCACATCCCACTCGG----------------------------------------------------------TC------------GA----AAAG-------------------------GGGG--TGGG------------AGATTTC---GTTGA-TTTTTGCATGACGACAGCAAAAAGCGAAAAGGCGG----------------AAC------AACAATCGAAATGC-AACTGAAC---------------------------------------------------------------GT------G------CGTGTGT--TGGTGTGCA----------------AGCGAGGCGGCCT-------------ATATACAGCA-GACATGCGCTCT--CA-----CTCAGA--GACTTGAACTTGAAAACT--CTTTACTGC----------------------------------------------------------------------------CGGCAAAA---A--TCGAGAGA--------------AACSizeHit CountTotal NormTotal
No Reads
droRho1
CTGCCCCGACCCCC---------CAAAACCACCCACCACCCACTCGA----------------------------------------------------------C------------------------------------------------AGAAAAGGGG------------AGATTTC---GTTGA-CTTTTGCATGACGACAGCAAAAAGCGAAAAGGCGG----------------AAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------GA------G--------TGTGT--GGGTGTGCG----------------AGCGAGGCGGCCT-------------ACATAAAGTA-GACATGCGCTCT--CG-----CTCAGC--GACTTGAACTTGAAAACT--CTTTACTGC----------------------------------------------------------------------------CGGCAAAA---A--ACGAGAGA--------------GATSizeHit CountTotal NormTotal
No Reads
droFic1
CCGGCGGAACCCC----------CA------C-CA-CGCCCACTTGG------------------------------------------------------------------------------------------------------------AGAGAGGGG------------AGATTTC---GTTGA-TTTTTGCATGACGACAGCAAAAAGCGAAAAGGCGG----------------AAC------AACAATCGAAATGC-AACTGCAC---------------------------------------------------------------GC------G------TGTGTGT--GGGTGAGCG----------------AGCGAGGAGGCCT-------------GTATTAAGCA-GACATGCGCTCT--TG-----CTCAGC--GACTTGAACTTGAAAACT--TTTTACTGC----------------------------------------------------------------------------CGGCAAAA---A--AAAA-TGTGAGTGGGAG----AGCGSizeHit CountTotal NormTotal
No Reads
droKik1
CAGCCCCGCCCCCT----------------------------CTGGA------------------------------------------------------------A-------------CGAA---GGGGGTAAGAAATGGG-----------CGGAAGGCG------------AAATTTC---GTTGA-TTTCTGCATGACGACAGCAAAAAGCGAAAAGGCGAAAGGAAACGA-GAAACAACAACAACAATAGTCGGAGTGC-AGC------GCACA--CACACACAAACGCCCACACATTGCA-CT--------------GCTGCTG--------------C--------TGCAT--AGGAGT--G----------------AACGAGAAGGCGA-------------ACATGGCGCG-GACATGCGCTCT--CGCT-------------CTTGAACTTGAAAAC----------------------------------------------------------------------------------------CGGCAAACGAAC--GAGAGAGG-------AG----AGCGSizeHit CountTotal NormTotal
No Reads
droAna3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTT---GTTGATTTTTTGCATGACGACAGCAAAAAGC-AAGAGGCGG----------------AAC------AACAAACGAAG--CAAAGTGCACCACAATACC--------------TCACACTGCATCT--------------------GC-----GGGTGTGCGGGTGTGCGTGTGT--GGGTGAGTG--------AGAGTATG-------------TGCGAGCAAACAAATATGGCGCA-GACATGCGCACT--CT-----GCCACC--AACTTGAACTTGAAAACT---TTTACTGC------------------CGCCGTCGCCGTCGCCGCCGCTGCCCTTTCCAACAGCGACGTCGACAGCGCAGCCAACCGGCAAAC------CAGAGAGA------G-------ACTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................GTGCGTGTGT--GGGTGAGTG--------AG........................................................................................................................................................................................................................2112.002000002
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GCACT--CT-----GCCACC--AACTTGAA........................................................................................................................................2111.001010000
.......................................................................................................................................................................................................................................................................................................................................................TGCGGGTGTGCGTGTGT--GGGTGAGTG--------..........................................................................................................................................................................................................................2611.001000001
......................................................................................................................................................................................................................................................................................................................T--------------------GC-----GGGTGTGCGGGTGTGCG..................................................................................................................................................................................................................................................2040.251000001
droBip1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT---GTTGA-TTTTTGCATGACGACAGCAAA-AGCCAAGAGGCGG----------------AAC------AACAAACGAAG--CAAAGTGCACCACAAAACC--------------TCACACTGCATCT-------CG---------CTGCAGGCT-C------G------CGTGTGT--GGGTGAGAG----AGTGAGAGTATG-------------TACGAGCAAACAAATATGGCGCA-GACATGCGCACT--CT-----GCCACC--AACTTGAACTTGAAAACT---TTTACTGCTGCTGCTTCTGCCGCTGTCGCTGTCGCAGTCGCAGTCGCTGCCCATTCCCTTACCGAC---GGCAGCGCAGCCAACCGGCAAAC------CAGAGAGA---------------CTSizeHit CountTotal NormTotal
No Reads
dp5
CAAGCGGGACGCC------------------------A--CGCTGGG----------------------------------------------------------------------TGGA-----G---------------------------AGGGAGGAGGAGCACAAGAAACAAATTTT---GTTGA-TTTTTGCATGACGACAGCAAAAAGCA-AGCGACGA----------------GAA------AACAATG-------------CACCACGGA--C--------------CCACACTGCAACT-------GAG-TTTGTTCGTGC-----GA------G--------TATGTGTGTGTGTGAGAGAGAGGGAGAGCGCG-------------AGCGGACAAACAAATATGGCGCA-GTCATGCGCATT--CT-----CTGAGA--AACTTGAACTTGAAAAC----------------------------------------------------------------------------------------CGGCAAAC---C--GAGAGAGG------GAGAAGCAGCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................CTGGG----------------------------------------------------------------------TGGA-----G---------------------------AGGGAGGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................211203.0020301160301168032
..........................................CTGGG----------------------------------------------------------------------TGGA-----G---------------------------AGGGAGGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................201109.00109064010830024
...........................................TGGG----------------------------------------------------------------------TGGA-----G---------------------------AGGGAGGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................19126.002601300029002
...........................................TGGG----------------------------------------------------------------------TGGA-----G---------------------------AGGGAGGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................20125.002501401018001
..........................................CTGGG----------------------------------------------------------------------TGGA-----G---------------------------AGGGAGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................1917.0070600001000
..........................................CTGGG----------------------------------------------------------------------TGGA-----G---------------------------AGGGAGGAGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2216.0060400011000
...........................................TGGG----------------------------------------------------------------------TGGA-----G---------------------------AGGGAGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050400010000
..........................................CTGGG----------------------------------------------------------------------TGGA-----G---------------------------AGGGAGGAGGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000002000
..........................................CTGGG----------------------------------------------------------------------TGGA-----G---------------------------AGGGAGGAGGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020100001000
...........................................TGGG----------------------------------------------------------------------TGGA-----G---------------------------AGGGAGGAGGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000002000
.........................................GCTGGG----------------------------------------------------------------------TGGA-----G---------------------------AGGGAGGAGGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
............................................GGG----------------------------------------------------------------------TGGA-----G---------------------------AGGGAGGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................TGTGAGAGAGAGGGAGAGCGCG-------------AGC..................................................................................................................................................................................................2511.0010000001000
...............................................................................................................................................................................................................................................................................................................................................................................TGAGAGAGAGGGAGAGCGCG-------------AGCGG................................................................................................................................................................................................2511.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GCA-GTCATGCGCATT--CT-----CTGAGA--................................................................................................................................................2311.0010100000000
..........................................CTGGG----------------------------------------------------------------------TGGA-----G---------------------------AGGGAGGAGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................GCTGGG----------------------------------------------------------------------TGGA-----G---------------------------AGGGAGGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
............................................GGG----------------------------------------------------------------------TGGA-----G---------------------------AGGGAGGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
........................................................................................................................................................................................................................CA-AGCGACGA----------------GAA------AACAATG-------------CACCACG..............................................................................................................................................................................................................................................................................................................................2711.0010100000000
................................................................................................................................................................................................................................................................ATG-------------CACCACGGA--C--------------CCACACTGCAACT-------G......................................................................................................................................................................................................................................................................................2711.0010100000000
.............................................GG----------------------------------------------------------------------TGGA-----G---------------------------AGGGAGGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010100000000
...........................................................................................................................................................................................................................................................................................................................................................................TGTGTGAGAGAGAGGGAGAG......................................................................................................................................................................................................................2040.2510100000000
droPer2
CAAGCGGGACGCC------------------------A--CACTGGG----------------------------------------------------------------------AGTA-----G---------------------------AGGGCGGAGGAGCACAAGAAACAAATTTT---GTTGA-TTTTTGCATGACGACAGCAAAAAGCA-AGCGACGA----------------GAA------AACAATCGAAGTGC-A------CCACGGA--C--------------CCACACTGCAACT-------GGGCTTTGCTCGTGC-----GAGTATGTG--------TGTGT--GTGTGTGTGAGAGAGGGAGAGCGCG-------------AGCGGACAAACAAATATGGCGCA-GTCATGCGCACT--CT-----CTGAGA--AACTTGAACTTGAAAAC----------------------------------------------------------------------------------------CGGCAAAC---C--GAGAGAGG------GAGAAGCAGCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................CAGCAAAAAGCA-AGCGACGA----------------GA................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAC----------------------------------------------------------------------------------------CGGCAAAC---C--GAGAGAGG------GAG........2511.001000001
...........................................TGGG----------------------------------------------------------------------AGTA-----G---------------------------AGGGCGGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100
droWil2
AAGGA------------------------------------------------------------------------------------------------------------------------------AATAAA-----------------GCATAGGCAA------------AAATTTCAGTGTTGA-TTTTTGCATGACGACAGCAAAAAGCA-GCAGACGA----------------AAG------AGACAGCGATATGG-AAGTGCACCACAGAACC-------------CACACACTGCAATTTCTGGATGAA--TCCCTTGTGT-----ATGTATGTA--------TGTGT--GTGTGTGTG----------------TGTGTGGAG----AACTGGCAAACAAATATGGCGCA-GACCTGCGCACT--GT-----GAGGGC--AACTTGAACTTGAAAATG--TTTT------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................CACT--GT-----GAGGGC--AACTTGAACTT.....................................................................................................................................2311.00100100
............................................................................................................................................................ATAGGCAA------------AAATTTCAGTGTTGA-TTTT.................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
..............................................................................................................................................................................................................................................................................................................................................................................GTGTG----------------TGTGTGGAG----AACT.................................................................................................................................................................................................1820.50100100
........................................................................................................................................................................................................................................................................................................................................TGTGT-----ATGTATGTA--------TGTGT--GTGTGTG....................................................................................................................................................................................................................................2680.13101000
......................................................................................................................................................................................................................................................................................................................................................................GT--GTGTGTGTG----------------TGTGTGG...........................................................................................................................................................................................................18200.05101000
droVir3
AAGAG-----------------------------------------------------------------------------------------------------------------------------------------------G-----AAGAGCCACA------------AAATGTG---TTCAG-CTTTCGCATGACGACAGCAAAAAGCAGCAG--CGACAG---------CGGCAGC------AACAAGAACAATGA-AAGTGCAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................GACAG---------CGGCAGC------AACAAG...................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................AGCAAAAAGCAGCAG--CGACAG---------CGGCA.................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................GACGACAGCAAAAAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................GCCACA------------AAATGTG---TTCAG-CT...................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CAAAAAGCAGCAG--CGACAG---------CG....................................................................................................................................................................................................................................................................................................................................................................2120.501001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................AGCAGCAG--CGACAG---------CGGCAGC------.........................................................................................................................................................................................................................................................................................................................................................21130.081001000000000000000000000000000000000000000000000000000000000000
droMoj3
CTGCCTAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA---A--CAGAGAGA--------------GCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CACACTCGCCCCT-AC-------------------------ACACGAACAGAAAGGCCTGCGAAATGAAAGTAAACACAAAGAACGAAAAGAAAAAATAAATAAATCATGCGAGCGATTA-CGAT---AAGAG---------------GAAGAGTTGAAAAAAA------------ATGTGTC---CACAA-TTTTCGCATGACGACAGCAAAAAGCAGCAA--CAGCAG---GCAGTACAACAACAACAACGACAATTAAAGTGC-AGTGCTGC-------------------------------------------------------TGCTGCAT-C----------------------GCGTGTGCG----------------AGCGAGAGAGCG-AGCGGGCAAACAAAAATGGCGCATGGCATGCGCACT--GA-----G-CAGCAGAACTTGAACTTGAAAATTGCTTTTATTGT----------------------------------------------------------------------------TG-------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAAATGGCGCATGGCATG.......................................................................................................................................................................2111.00110

Generated: 05/18/2015 at 09:14 AM