ID:

dsi_23482

 Coordinate:

x:17498686-17498835 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.8 -6.6 -6.5 -6.4

Flybase annnotation

CDS [x_17498836_17498840_-]; five_prime_UTR [x_17498841_17499116_-]; exon [x_17498836_17499116_-]; intron [x_17495459_17498835_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGCTCGCCGATATTATACCAAATTCGCCATAGCAAAACGAGGACAATGAGGTAAGAATGGACAAGAAAGCAACGGTAGATGCAATCGGTGTACAGTGGGGACTCTGTAACTCGAACCAACAGGATCTTGCATGTAAAGTAGCAGAGTTCCCACACATTTTTTAGATATCCAATTCTAGGATCATATTAATCCATAACATTGGCTTCGAGTTTAGAGTATATACAGGGTATAGTATACCACTAATTTAATA
***************************************************.......................((..............(((((........)))))))******************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 M023
head
 GSM343915
embryo
....................................................................................TCGGTGTACAGTGGGGACTCTGTAAC............................................................................................................................................ 26 0 1 3.00 3 1 0 1 1 0 0 0 0 0 0
......................TTCGCCATAGCAAAACGAGGACAATGAGG....................................................................................................................................................................................................... 29 0 1 3.00 3 1 0 0 1 1 0 0 0 0 0
..............................................................................ATGCAGTCGGTGTACAGTGGG....................................................................................................................................................... 21 1 1 2.00 2 0 0 0 0 0 0 0 2 0 0
...............................................................................................................................................................................TAGGATCATATTAATCCATAACATTGGC............................................... 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...................................................TAAGAATGGACAAGAAAGCAACGGT.............................................................................................................................................................................. 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
...................................................TAAGAATGGACAAGAAAGCAACGGTA............................................................................................................................................................................. 26 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.........................................................TGGACAAGAAAGCAACGGTAGATGCAA...................................................................................................................................................................... 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
...................................................................................................................................TGTTTAGTAGCAGAGTTTCCACA................................................................................................ 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............TTATACCAAATTCGCCATAGCAAAACGAGG................................................................................................................................................................................................................ 30 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
....................................................................................TCGGTGTACAGTGGGGACTCTGTAACT........................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................TGGACAAGAAAGCAACGGTAGATGC........................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................AATCCATAACATTGGCTTCGA.......................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...............................................................................................TGGGCACTCTGTAACTCGAACCAACAGGA.............................................................................................................................. 29 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
....................................................................................TCGGTGTACAGTGGGCACTCTGTAA............................................................................................................................................. 25 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.....................................................................CAACGGTAGATGCAATCGGT................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.......................TCGCCATAGCAAAACGAGGACAATGAGG....................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...............................................................................................TGGGGACTCTGTAACTCGAACCAAC.................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................TCGGTGTACAGTGGGCACTCTGTA.............................................................................................................................................. 24 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0
..............................................TGAGGTAAGAATGGACAAGAAAGCA................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................AATGGACAAGAAAGCAACGGTAGA........................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................ATGGACAAGAAAGCAACGG............................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGAGTATATACAGGGTATAGTATACCAC.......... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................TGTAAAGTAGCAGAGTTCCCACACATTT........................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................TGAGGTAAGAATGGACAAGAAAGCAAC................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................AACGAGGACAATGAGGTAAGAATGGA............................................................................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................TTCGCCATAGCAAAACGAGGACAATGAGGA...................................................................................................................................................................................................... 30 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................TACAGTGGGGACTCTGTAACTCGAACCAA................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................TGTAACTCGAACCAACAGGATCTTGCA....................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................TGGACAAGAAAGCAACGGTAGATGCAAT..................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................................................TGCAATCGGTGTACAGTGGGGAC.................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................GGGATCATATTAAACCATAACATTGGC............................................... 27 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0
...................................................TAAGAATGGACAAGAAAGCAACGG............................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.....................ATTCGCCATAGCAAAACG................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................TTCTAGGATCATCGTAAT............................................................ 18 2 2 0.50 1 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................................................TTCTAGGACCATCTTAAT............................................................ 18 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0
...............................................................................................TGGGGACTCCGTAAC............................................................................................................................................ 15 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................TCGAATGTAAAGTAGAAGAG........................................................................................................ 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 1
.........................................................................................................................................................................................................GCTTCGAGGTTAGAGTACT.............................. 19 3 8 0.13 1 0 0 0 0 1 0 0 0 0 0
...............................................................................TCGAATCGGTGTACAG........................................................................................................................................................... 16 2 20 0.10 2 2 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TCGAGCGGCTATAATATGGTTTAAGCGGTATCGTTTTGCTCCTGTTACTCCATTCTTACCTGTTCTTTCGTTGCCATCTACGTTAGCCACATGTCACCCCTGAGACATTGAGCTTGGTTGTCCTAGAACGTACATTTCATCGTCTCAAGGGTGTGTAAAAAATCTATAGGTTAAGATCCTAGTATAATTAGGTATTGTAACCGAAGCTCAAATCTCATATATGTCCCATATCATATGGTGATTAAATTAT
********************************************************************************************************************************************.......................((..............(((((........)))))))*************************************************** 		Read size # Mismatch Hit Count Total Norm Total O002
Head
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
....................................................................................................................................................................................................GTAACCGAAGCTCAAATC.................................... 18 0 1 1.00 1 1 0 0 0
.............................................................................CTACGTTAGCCACATGTCACC........................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0
..................................................................................................................................................AAGGGTGTGTGAAAAAT....................................................................................... 17 1 5 0.20 1 0 0 1 0
...............ATGGTTAAAGCGGTGTC.......................................................................................................................................................................................................................... 17 2 19 0.05 1 0 0 0 1
............................................................................................................TGAGCTTGGATGTGCT.............................................................................................................................. 16 2 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:17498636-17498885 - dsi_23482 AGCTCG---------CCGATATT-------------------------ATACCAAATTCGCCATAGCAAAACGAGGACAATGAGGTAAGAATGGACAA-----GAAAGC-AACGGTAGATGCAATCG--GTGTACAGTGGGGACTCTGTAACTCGAACCAAC----AGGATC-TTGCATGT-----AAAGTAG----------------------------------------------------------------------------------------------------------------------------------------------------------CA--GAGTTCCCACACATTTTTTAGAT-----------ATCCAATTCTAGGATCATATT---------------AATCCATAAC------------ATTGGCTTCGAGTTTAGAG------TATATA--CAGGGTATAGTATACCACTAATTTAATA
droSec2 scaffold_8:712053-712273 - AGCTCG---------CCGATATT-------------------------ATACCAAATTCGCCATAGCAAAACGAGGACAATGAGGTAAGAATGGACAA----------G-AAAGGTAGATGCAATCG--GTGTACAGTGGTGACTCTGTAACTCGAACCAAC----AGGATC-TTGCATGT-----AAAGTAG----------------------------------------------------------------------------------------------------------------------------------------------------------CA--GAGTTCCCACACATTTTCTAGAT--ATCTCCGATATCCAACTCTA-------------------------------------------------------GGAGTTAAGAG------TATATACC-------CTGTATACCACTAATTTAATA
dm3 chrX:18405932-18406134 - AGCTCCAATAGTCAACCAATATT-------------------------ATACGAAATTCGCCATAGC-AAACGGGGACAATGAGGTAAGAGTGGACTA-------AAGC-AACGGTAGATGCAATCG--GTGTACAGTGGAGACTCTGTAACTCGAACCGCC----AGGATA-T-------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGACCATAACCGCCATAAT------------------------------------------------------------------------------------------------ATTGGCTTCGAGTTAAGAG------AGTTATTG-------CAGTATACAACTAATTTAATA
droEre2 scaffold_4690:8723017-8723236 - ATATCG---------CAAATATA-------------------------ACCTTCAATTCGCCATAGC-AAACGCGTGCAATGAGGTAAGAATGGACAA-------AAGC-AACGGGATATGCAATCC--GTGTACAGTGGGCACTCAGTAACTCGAACCAAC----AGAATT-AGGAAGGC-----AAAGCA-AATGTAC---------------------------------------------------------------------------------------------------------------------------------------------------CAAAGAGTTTCCA------------------------TATC---------------------------------AAACCGTAAC------------A--GTGTTCGAGTTATGAG------AGTTCTC-CCGCC--CCTTATACCATTAAT-TAATA
droYak3 X:17036939-17037165 - AGCTCG---------CAAATAAT-------------------------CTACCGAATTCACCACAGC-AAGCGCCTGCAATGAGGTAAGAATGGGCAA-------AAGC-AACGGGACATGCAATCGCGATGTACAGTGGGAACTCTCTAGCACGAACCACA----AGGATCGTAGGAAGT-----CAAG---------------------------------------------------------------------------------------------------------------------------------------------------CCAAAATAAGCA--GAGTTTCCA----ATTTTTGGAAATAACTTTG-TAACAA----------------------------------------------------------GTTATAATTAAGAG------AGTTCCTC-------ATGTATATCATTAATTTAATA
droEug1 scf7180000409528:594756-595033 - AAAACA---------T------T--AAATAACTCTGTAAATATATA--TAACAAAATCCGGCAAAGC-AATCACGTAAAATGAGGTAAGAATGGTAAAAAAAATAAAAC-AACGGGAGATAC----------TACAGTTGGACTTCTGTAAAAGGAACTAAGACCAAAGACT-TTAAAAATTTATAAATAC----------------------------------------------------------------------------------TTAAAAATCAAAAGTAATTCTAAGAAAAAAACTGAAAACGATGACAATATTTCTT---CAACAAATATCACATT------------------------------------------------------------------------------------------------CCAAAGTTCGTCTTACAAA------AGTCCACC-------CCGTATATCATTAATTTAATA
droBia1 scf7180000302432:828014-828138 + AAATA----------------TT--GAA--TCACTGTGAATACGCCGAATTGGAAATTGGAACCACCAAACCACGTAAGATGAGGTAAGATCGGTCGG-------AAAC-AACGGCAAAT-------------ACAGTCGGGCTTCTGCAAGTCGAACCAAG----AAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415395:444196-444514 - CGCTCT---------TGAATATT--ATA--TCGCTGTAAATAC--------------TGGACCCATC-GATCACGTAAAATGAGGTAAGAATGGTCAG-------AAAC-AACGGGAGATATAATGC--ATATACAGTCGGGCTTCTATAAGTCGAACTGAGT---ACAATC-CTAGCTTT-----AAAATAAAAAGATATAGTCGGTTTCGGAACGAAATAAATTTTAAAAATAG--TAATCAAACATTTTTAACAATCTATTACTAAATATCTAAA-------TATCATTCTAAGCTCAAGTCTACCAA--------GTGCTCTTTGAACCATAATTT--------------------------------------------------------------------------------------------------------CTCAGTTCGAGTCAGAAAATCGAATTTATT--GAAGACCAACTAT---------------
droEle1 scf7180000491006:661027-661146 - ACCTCT---------T------------------TGTAAATACAC---CTATATCATTCGCTGCGGC-AATCACGTAAAATGAGGTAAGAATGGTGAC-------AAAC-AACGGTAGATATAA-------ATACAGTCGGACTTCTGTAACTTGAAACACT----AAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779985:1146191-1146326 - CGCTCA---------TAAATATT--ACC--TCCTTGTAAATA-------TATACAAATCGCTGTGCC-AATCACGTAAAATGAGGTAAGAATGGTGAC-------AAAC-AACGGGAGATACAATACC-GATTACTGTCGAACTTCTGTAATTCGAACCACT----AGGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453829:1200827-1201139 + CGCTCC---------CCAATATT--AAT--TTGGTGTAAATAT---------ACCACTCGCTGCCCA-AATCACGTAAAATGAGGTAAGAATGGTCAC-------AAGT-AACGGGAGATATTTTGC--ATATACAGTTGGGCTTCCGTAACTCGAGTTATT----AAGAGTGAAACTTGT-----AAAAAAAAATGTTATCAACA------------ATTAA------ATAATAATATGTTTGAATATTTTGAATAATTTACTACTTAAATTTTAAT---------TCATTCAAAAACCAAA-----------------------------------------------------------------------------------------------------TTAAATTACTTTTAATCACTATATAAGAATAGTATAATTATAGGCTTCTC--------------CGTTGTAG-------CTTTTCAATACCTATATAGTA
droKik1 scf7180000302230:613796-613983 - TGCTCCGCAAAAAT-T------TCAATA--TCGGTGTAAATATTA---GTATTCGATTCGCGGCGAC-AATCACGTAAAATGAGGTAAGAATGGCCAG-------GCGCCAAGGGGAGCCAT---T----TATCCAGTGGCGGATCTGTAATTCCTGGGGGGCGCTGAAACT-TTATATATTTATAAAGGGAG----------------------------------------------------------------------------------------------------------------------------------------------------------CA--AAGATTTTCTATATTTTCTAG------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGCTCG---------CCGATATT-------------------------ATACCAAATTCGCCATAGCAAAACGAGGACAATGAGGTAAGAATGGACAA-----GAAAGC-AACGGTAGATGCAATCG--GTGTACAGTGGGGACTCTGTAACTCGAACCAAC----AGGATC-TTGCATGT-----AAAGTAG----------------------------------------------------------------------------------------------------------------------------------------------------------CA--GAGTTCCCACACATTTTTTAGAT-----------ATCCAATTCTAGGATCATATT---------------AATCCATAAC------------ATTGGCTTCGAGTTTAGAG------TATATA--CAGGGTATAGTATACCACTAATTTAATASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................TCG--GTGTACAGTGGGGACTCTGTAAC................................................................................................................................................................................................................................................................................................................................................................2613.00300000010101000000
........................................................TTCGCCATAGCAAAACGAGGACAATGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................2913.00300000011100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TAGGATCATATT---------------AATCCATAAC------------ATTGGC.......................................................2812.00200000000200000000
.....................................................................................TAAGAATGGACAA-----GAAAGC-AACGGT....................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000000100010000
.....................................................................................TAAGAATGGACAA-----GAAAGC-AACGGTA...................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000000100010000
...........................................................................................TGGACAA-----GAAAGC-AACGGTAGATGCAA............................................................................................................................................................................................................................................................................................................................................................................................2712.00200000000000020000
.....................TT-------------------------ATACCAAATTCGCCATAGCAAAACGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000001000000000
............................................................................................................................TCG--GTGTACAGTGGGGACTCTGTAACT...............................................................................................................................................................................................................................................................................................................................................................2711.00100000000100000000
...........................................................................................TGGACAA-----GAAAGC-AACGGTAGATGC..............................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCATAAC------------ATTGGCTTCGA..................................................2111.00100001000000000000
............................................................................................................C-AACGGTAGATGCAATCG--GT.....................................................................................................................................................................................................................................................................................................................................................................................2011.00100001000000000000
.........................................................TCGCCATAGCAAAACGAGGACAATGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
.........................................................................................................................................TGGGGACTCTGTAACTCGAACCAAC----..................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
................................................................................TGAGGTAAGAATGGACAA-----GAAAGC-A.........................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
.........................................................................................AATGGACAA-----GAAAGC-AACGGTAGA.................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000010000
..........................................................................................ATGGACAA-----GAAAGC-AACGG.....................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAG------TATATA--CAGGGTATAGTATACCAC..........2811.00100000000001000000
..................................................................................................................................................................................TGT-----AAAGTAG----------------------------------------------------------------------------------------------------------------------------------------------------------CA--GAGTTCCCACACATTT.........................................................................................................................................2811.00100000000000010000
................................................................................TGAGGTAAGAATGGACAA-----GAAAGC-AAC.......................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000100000000
.....................................................................AACGAGGACAATGAGGTAAGAATGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
........................................................TTCGCCATAGCAAAACGAGGACAATGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000000000
....................................................................................................................................TACAGTGGGGACTCTGTAACTCGAACCAA.......................................................................................................................................................................................................................................................................................................................................................2911.00100000000100000000
..................................................................................................................................................TGTAACTCGAACCAAC----AGGATC-TTGCA......................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
...........................................................................................TGGACAA-----GAAAGC-AACGGTAGATGCAAT...........................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000010000
.......................................................................................................................TGCAATCG--GTGTACAGTGGGGAC........................................................................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
.....................................................................................TAAGAATGGACAA-----GAAAGC-AACGG.....................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
.......................................................ATTCGCCATAGCAAAACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
droSec2
AGCTCG---------CCGATATT-------------------------ATACCAAATTCGCCATAGCAAAACGAGGACAATGAGGTAAGAATGGACAA----------G-AAAGGTAGATGCAATCG--GTGTACAGTGGTGACTCTGTAACTCGAACCAAC----AGGATC-TTGCATGT-----AAAGTAG----------------------------------------------------------------------------------------------------------------------------------------------------------CA--GAGTTCCCACACATTTTCTAGAT--ATCTCCGATATCCAACTCTA-------------------------------------------------------GGAGTTAAGAG------TATATACC-------CTGTATACCACTAATTTAATASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................AAAGGTAGATGCAATCG--GTGT...................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
............................................................................ACAATGAGGTAAGAATGGACA.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.................................................................GCAAAACGAGGACAATGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
....................................................................AAACGAGGACAATGAGGATT................................................................................................................................................................................................................................................................................................................................................................................................................................20110.0910100
dm3
AGCTCCAATAGTCAACCAATATT-------------------------ATACGAAATTCGCCATAGC-AAACGGGGACAATGAGGTAAGAGTGGACTA-------AAGC-AACGGTAGATGCAATCG--GTGTACAGTGGAGACTCTGTAACTCGAACCGCC----AGGATA-T-------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGACCATAACCGCCATAAT------------------------------------------------------------------------------------------------ATTGGCTTCGAGTTAAGAG------AGTTATTG-------CAGTATACAACTAATTTAATASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................GACAATGAGGTAAGAGTGGACTA-------AAGC-..........................................................................................................................................................................................................................................................................................................................................................................................................27112.001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................GTAAGAGTGGACTA-------AAGC-AACGGTA...................................................................................................................................................................................................................................................................................................................................................................................................2519.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TAAGAGTGGACTA-------AAGC-AACGGT....................................................................................................................................................................................................................................................................................................................................................................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TAGC-AAACGGGGACAATGAGGTAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TA-------AAGC-AACGGTAGATGCAATCG--GTG....................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000
..........................................................................................GTGGACTA-------AAGC-AACGGTA...................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GC-AAACGGGGACAATGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000
.....................................................................................TAAGAGTGGACTA-------AAGC-AACGGTAGA.................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................GATGCAATCG--GTGTACAGTGGAGACTC......................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TAGC-AAACGGGGACAATGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GAAATTCGCCATAGC-AAACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CCATAGC-AAACGGGGACAATGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................TAGC-AAACGGGGACAATGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................CGCCATAGC-AAACGGGGACAATGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................CGCCATAGC-AAACGGGGACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................GATGCAATCG--GTGTACAGTGGAGAC........................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................ATCG--GTGTACAGTGGAGACTC......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...........................................................................................................................ATCG--GTGTACAGTGGAGACTCT.....................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............ACCAATATT-------------------------ATACGAAATTCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................TGCAATCG--GTGTACAGTGGAG..........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................CAATCG--GTGTACAGTGGAGACT.......................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TAAT------------------------------------------------------------------------------------------------ATTGGCTTCGAGTTAAG............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...TCCAATAGTCAACCAATATT-------------------------A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................................................AATTCGCCATAGC-AAACGGGGACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCTCCAATAGTCAACCAATATT-------------------------ATACGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................GCC----AGGATA-T-------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGACCATAACCGC...................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TATT-------------------------ATACGAAATTCGCCATAGC-AAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TCGAACCGCC----AGGATA-T-------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGACCA..........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TTCGCCATAGC-AAACGGGGACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................ACAATGAGGTAAGAGTGGACTA-------AAGC-..........................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CCATAGC-AAACGGGGACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CCATAGC-AAACGGGGACAATGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................AAT------------------------------------------------------------------------------------------------ATTGGCTTCGAGTTAAGAG------AGTTA...............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................ATCG--GTGTACAGTGGAGACTCTGTAACTC..............................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGTCAACCAATATT-------------------------ATACGAAATTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................AATCG--GTGTACAGTGGAGACTCTG....................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................ACCGCCATAAT------------------------------------------------------------------------------------------------ATTGGCTTCGAGTTAA.............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................AGATGCAATCG--GTGTACAGTGGA...........................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TAAGAGTGGACTA-------AAGC-AAC.......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TT-------------------------ATACGAAATTCGCCATAGC-AAACGGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................CGCCATAGC-AAACGGGGACAATGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CATAGC-AAACGGGGACAATGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TA-------AAGC-AACGGTAGATGCAATCG--.......................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................ATAGC-AAACGGGGACAATGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................GATGCAATCG--GTGTACAGTGGAGACTCATC...................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................GTGGACTA-------AAGC-AACGGTAGA.................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.......................................................................................AGAGTGGACTA-------AAGC-AACGGT....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GAAATTCGCCATAGC-AAACGGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CCATAGC-AAACGGGGACAATG......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATT-------------------------ATACGAAATTCGCCATAGC-AAACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TGAGGTAAGAGTGGACTA-------AAGC-AACGG.....................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GC-AAACGGGGACAATGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................TT-------------------------ATACGAAATTCGCCATAGC-AAACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCTTCGAGTTAAGAG------A...................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCTTCGAGTTAAGAG------....................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................C----AGGATA-T-------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGACCATAACCGCCATA...............................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TGAGGTAAGAGTGGACTA-------AA.............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................GAGTGGACTA-------AAGC-AACGGTAGATGC..............................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TAAT------------------------------------------------------------------------------------------------ATTGGCTTCGAGTTAAGAG------AGT.................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................ACGAAATTCGCCATAGC-AAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................A-------AAGC-AACGGTAGATGCAATC..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................AGTGGACTA-------AAGC-AACGGTAGATGC..............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................TGGACTA-------AAGC-AACGGTAGATGCAATC..........................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................T-------------------------ATACGAAATTCGCCATAGC-AAACGGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CG--GTGTACAGTGGAGACTCT.....................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................CAATCG--GTGTACAGTGGAGAC........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................CCATAGC-AAACGGGGACAATGAGGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TCGCCATAGC-AAACGGGGACAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CATAGC-AAACGGGGACAATGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................................................................TGAGGTAAGAGTGGACTA-------AAGC-AAC.......................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CATAGC-AAACGGGGACAATGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................GTAAGAGTGGACTA-------AAGC-..........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AT------------------------------------------------------------------------------------------------ATTGGCTTCGAGTTAAGAG------....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................................................TAGC-AAACGGGGACAATGAGGTAAGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................AAGAGTGGACTA-------AAGC-AACGGTAGA.................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................AAACGGGGACAATGAGGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................................................................AAACGGGGACAATGAGGATT................................................................................................................................................................................................................................................................................................................................................................................................................................20150.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAG------AGTTATTG-------CAGGCC...............19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
droEre2
ATATCG---------CAAATATA-------------------------ACCTTCAATTCGCCATAGC-AAACGCGTGCAATGAGGTAAGAATGGACAA-------AAGC-AACGGGATATGCAATCC--GTGTACAGTGGGCACTCAGTAACTCGAACCAAC----AGAATT-AGGAAGGC-----AAAGCA-AATGTAC---------------------------------------------------------------------------------------------------------------------------------------------------CAAAGAGTTTCCA------------------------TATC---------------------------------AAACCGTAAC------------A--GTGTTCGAGTTATGAG------AGTTCTC-CCGCC--CCTTATACCATTAAT-TAATASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................ATATA-------------------------ACCTTCAATTCGCCATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
....................................................................AAACGCGTGCAATGAGGATT................................................................................................................................................................................................................................................................................................................................................................................................................................2080.1311000000
droYak3
AGCTCG---------CAAATAAT-------------------------CTACCGAATTCACCACAGC-AAGCGCCTGCAATGAGGTAAGAATGGGCAA-------AAGC-AACGGGACATGCAATCGCGATGTACAGTGGGAACTCTCTAGCACGAACCACA----AGGATCGTAGGAAGT-----CAAG---------------------------------------------------------------------------------------------------------------------------------------------------CCAAAATAAGCA--GAGTTTCCA----ATTTTTGGAAATAACTTTG-TAACAA----------------------------------------------------------GTTATAATTAAGAG------AGTTCCTC-------ATGTATATCATTAATTTAATASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................G-TAACAA----------------------------------------------------------GTTATAATTAAGAG------AGT.................................2411.00100000010000
.......................................................ATTCACCACAGC-AAGCGCCTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.............................................................CACAGC-AAGCGCCTGCAATGAGGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
droEug1
AAAACA---------T------T--AAATAACTCTGTAAATATATA--TAACAAAATCCGGCAAAGC-AATCACGTAAAATGAGGTAAGAATGGTAAAAAAAATAAAAC-AACGGGAGATAC----------TACAGTTGGACTTCTGTAAAAGGAACTAAGACCAAAGACT-TTAAAAATTTATAAATAC----------------------------------------------------------------------------------TTAAAAATCAAAAGTAATTCTAAGAAAAAAACTGAAAACGATGACAATATTTCTT---CAACAAATATCACATT------------------------------------------------------------------------------------------------CCAAAGTTCGTCTTACAAA------AGTCCACC-------CCGTATATCATTAATTTAATASizeHit CountTotal NormTotal
No Reads
droBia1
AAATA----------------TT--GAA--TCACTGTGAATACGCCGAATTGGAAATTGGAACCACCAAACCACGTAAGATGAGGTAAGATCGGTCGG-------AAAC-AACGGCAAAT-------------ACAGTCGGGCTTCTGCAAGTCGAACCAAG----AAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CGCTCT---------TGAATATT--ATA--TCGCTGTAAATAC--------------TGGACCCATC-GATCACGTAAAATGAGGTAAGAATGGTCAG-------AAAC-AACGGGAGATATAATGC--ATATACAGTCGGGCTTCTATAAGTCGAACTGAGT---ACAATC-CTAGCTTT-----AAAATAAAAAGATATAGTCGGTTTCGGAACGAAATAAATTTTAAAAATAG--TAATCAAACATTTTTAACAATCTATTACTAAATATCTAAA-------TATCATTCTAAGCTCAAGTCTACCAA--------GTGCTCTTTGAACCATAATTT--------------------------------------------------------------------------------------------------------CTCAGTTCGAGTCAGAAAATCGAATTTATT--GAAGACCAACTAT---------------SizeHit CountTotal NormTotal
No Reads
droEle1
ACCTCT---------T------------------TGTAAATACAC---CTATATCATTCGCTGCGGC-AATCACGTAAAATGAGGTAAGAATGGTGAC-------AAAC-AACGGTAGATATAA-------ATACAGTCGGACTTCTGTAACTTGAAACACT----AAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CGCTCA---------TAAATATT--ACC--TCCTTGTAAATA-------TATACAAATCGCTGTGCC-AATCACGTAAAATGAGGTAAGAATGGTGAC-------AAAC-AACGGGAGATACAATACC-GATTACTGTCGAACTTCTGTAATTCGAACCACT----AGGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CGCTCC---------CCAATATT--AAT--TTGGTGTAAATAT---------ACCACTCGCTGCCCA-AATCACGTAAAATGAGGTAAGAATGGTCAC-------AAGT-AACGGGAGATATTTTGC--ATATACAGTTGGGCTTCCGTAACTCGAGTTATT----AAGAGTGAAACTTGT-----AAAAAAAAATGTTATCAACA------------ATTAA------ATAATAATATGTTTGAATATTTTGAATAATTTACTACTTAAATTTTAAT---------TCATTCAAAAACCAAA-----------------------------------------------------------------------------------------------------TTAAATTACTTTTAATCACTATATAAGAATAGTATAATTATAGGCTTCTC--------------CGTTGTAG-------CTTTTCAATACCTATATAGTASizeHit CountTotal NormTotal
No Reads
droKik1
TGCTCCGCAAAAAT-T------TCAATA--TCGGTGTAAATATTA---GTATTCGATTCGCGGCGAC-AATCACGTAAAATGAGGTAAGAATGGCCAG-------GCGCCAAGGGGAGCCAT---T----TATCCAGTGGCGGATCTGTAATTCCTGGGGGGCGCTGAAACT-TTATATATTTATAAAGGGAG----------------------------------------------------------------------------------------------------------------------------------------------------------CA--AAGATTTTCTATATTTTCTAG------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 10:47 PM