ID:

dsi_23413

Coordinate:

2r:8565488-8565637 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [2r_8564169_8565487_+]; CDS [2r_8564169_8565487_+]; intron [2r_8565488_8567801_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GGGCTTCAAGAATGACGCCAACAGTCTGGAGAATGGTCAACTAGCTGCTGGTGAGTTACGAAATTTACTATGTTTAAAGAATAATTATTGGACATAGGGGGAAATATGTCAGATCTATAATTGATTAAATATAATACTTAATAATTTACATGGTTGGAAAGCATATAGAAATATATTTGCTAAAACAATAATATGTTAGATTAAGATTCAGGTGGAGCTGGCAAAAAGCTGTCTTCACTTGGAGGCCAAA
**************************************************(((((((....)))))))(((((((((..(((.((.(((.((((((........)))))).)))..)).)))..)))))))))..............(((((((((...((((.(((......))).))))....))))..)))))....**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
SRR553486
Makindu_3 day-old ovaries
M024
male body
SRR553487
NRT_0-2 hours eggs
SRR553485
Chicharo_3 day-old ovaries
............TGACGCCAACAGTCTGGAGAATGGT..................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.................................................................................TAATTTTTGGACAGAGGGGA..................................................................................................................................................... 20 3 15 0.53 8 0 8 0 0 0
.................................................................................TAATTTTTGGACAGAGGGG...................................................................................................................................................... 19 2 4 0.50 2 0 2 0 0 0
.......................................................................................TCGGACATAGGGGGAA................................................................................................................................................... 16 1 3 0.33 1 1 0 0 0 0
.............................AGAATGGTCATTTAGCTG........................................................................................................................................................................................................... 18 2 5 0.20 1 0 0 1 0 0
.......................................................................................TCGGACATAGGGGAAAAT................................................................................................................................................. 18 2 5 0.20 1 0 0 0 0 1
............................................................................................................TCTGATCTATACTTGATT............................................................................................................................ 18 2 5 0.20 1 0 0 1 0 0
.......................................................................................TCGGACATAGGGGAAAA.................................................................................................................................................. 17 2 16 0.19 3 0 1 0 2 0
.................................................................................TAATTTTTGGACAGAGGG....................................................................................................................................................... 18 2 12 0.17 2 0 2 0 0 0
.............................................................................................................................................................................................................ATTCAGGTCGAGGTGGC............................ 17 2 20 0.15 3 3 0 0 0 0
...................................................................................................................................................ACATGGTTGGAAATC........................................................................................ 15 1 13 0.08 1 0 0 0 1 0
.....................................................................................................................................................ATGGTTGGAAATCAT...................................................................................... 15 1 18 0.06 1 0 0 0 1 0
.....................................................................................TAGTAGACATAGGGGG..................................................................................................................................................... 16 2 20 0.05 1 0 1 0 0 0
.......................................................................................TCGGACATAGGGGTAA................................................................................................................................................... 16 2 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

CCCGAAGTTCTTACTGCGGTTGTCAGACCTCTTACCAGTTGATCGACGACCACTCAATGCTTTAAATGATACAAATTTCTTATTAATAACCTGTATCCCCCTTTATACAGTCTAGATATTAACTAATTTATATTATGAATTATTAAATGTACCAACCTTTCGTATATCTTTATATAAACGATTTTGTTATTATACAATCTAATTCTAAGTCCACCTCGACCGTTTTTCGACAGAAGTGAACCTCCGGTTT
**************************************************(((((((....)))))))(((((((((..(((.((.(((.((((((........)))))).)))..)).)))..)))))))))..............(((((((((...((((.(((......))).))))....))))..)))))....**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
SRR553487
NRT_0-2 hours eggs
SRR553485
Chicharo_3 day-old ovaries
SRR618934
dsim w501 ovaries
.....AGTTCTTACTGCGGTTGTCAGA............................................................................................................................................................................................................................... 22 0 1 2.00 2 2 0 0 0
..............................................................................................................................................................................................................AAGTCCAACTCGACCGTTTTGCGT.................... 24 3 1 1.00 1 0 1 0 0
........................................................ATGCTTTAAATGATAC.................................................................................................................................................................................. 16 0 2 0.50 1 0 0 1 0
.............CTGCTGTTGTGAGACCTC........................................................................................................................................................................................................................... 18 2 11 0.09 1 0 0 0 1
....................................................................................................................................................................................................................................GCCAGAAGGGAACCTCTGG... 19 3 13 0.08 1 0 0 0 1
......................................................................................................................................................................................TTTGTGATTAGACAATC................................................... 17 2 19 0.05 1 0 0 0 1
..............................................................................................................................................................................................................AAGTCCACCGCGACC............................. 15 1 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:8565438-8565687 + dsi_23413 GGGCTTCAAGAATGACGCCAACAGTCTGGAGAATGGTCAACTAGCTGCTGGTGAGTTACGAAATTTAC-------------------TATG--------TT--TAAAG---------------------------AATAATTATTGGA--------------------CA--------------------------------TAGGGGGAAATATGTCAGATCTAT----------------------------AAT-------TGAT----------TAAATATAATACT---TAATAATTTACATGGT-------------------------------------TGGAAAGC---ATATAGAAATATATTTGCTAAAACAATAATA--------------------------------------------------------------------------TG--------------------------------------------------------------------------------------------TTAG--AT---------------------------------------------------------------------------------------------------------------------TAA---------------------------GA-TTCAGGTGGAGCTGGCAA-------------------------------------------------AAAGCTGTCT--T---CAC----------------------TTGGAGGC-------CA-----------------------AA
droSec2 scaffold_1:5411699-5411923 + GGGCTTTAAGAATGACGCCAACAGTCTGGAGAATGGTCAACTAGCTGCTGGTGAGTTACGAAATTTAC-------------------TATG--------TT--TAAAG---------------------------AATAATTATTGTATATA----------------------------------------------------------------------------------------------------------------TGAT----------TAAATATAAAACC---TAATAATTTTCATGGT-------------------------------------TGGAAAGC---GTATAGAAATATATATGCTAAAACAATAATA--------------------------------------------------------------------------TG--------------------------------------------------------------------------------------------TTAG--AT---------------------------------------------------------------------------------------------------------------------TAA---------------------------GA-TTCAGGTGGAGCTGGCAA-------------------------------------------------AAAGCTGTCT--C---CAC----------------------TTGGAGGC-------CA-----------------------AA
dm3 chr2R:7860496-7860754 + GGGCTTCAAGAATGACGCCAACAGTCTGGAGAATGGTCAACTAGCTGCTGGTGAGTTACGAAATTTAC-------------------TATG--------TTT-TTAAG---------------------------AAGAATTATTGTATATA----TGG--------ACA--------------------------------TAAGGGGAAATATGTCAGATCTAC----------------------------AAT-------TTAT----------TTAATATAATATT---TAATATTATTAATGTT-------------------------------------TGGAAAGC---GTATAGAAATATATTTGCTAAAACAATAATA--------------------------------------------------------------------------TG--------------------------------------------------------------------------------------------TTAG--AT---------------------------------------------------------------------------------------------------------------------TAA---------------------------GA-TTCAGGTGGAGCTAACAA-------------------------------------------------AAAGCTGTCT--C---CAC----------------------TTGGAGGC-------CA-----------------------AA
droEre2 scaffold_4845:17935439-17935671 - GGGCTTCAAGAATGACGCCAACAGTCTGGAGAATGGTCAACTAGCTGCTGGTGAGTTACAAAATTTGC-------------------TATA--------TT--TAAAG---------------------------AATTTTTTT--------------------------------------------------------------GGGTAATAAG---------C----------------------------CAT-------AGAT----------TTAATATAATTTT---AAATATTATTCAGGGGT-------------------------------------------------TTCAAAAGATATATTCTAACA-AAAAAAA--------------------------------------------------------------------------AG--------------------------------------------------------------------------------------------TTAG--AT---------------------------------------------------------------------------------------------------------------------T---------------AAGGGAAAATCATAGTTTTTAGGTGGAGTTGACAA-------------------------------------------------AAAGGTGCCT--CCACCAC----------------------TTGGAGT----------------------------------A
droYak3 2R:9092901-9093118 - GGGTTTTAAGAACGACGCCAACAGTCTGGAGAATGGTCAATTAGCTGCTGGTGAGTTACAAAATGTGT-------------------TATG--------TT--TAAAG---------------------------AGTGATTTTTTTA----------------------------------------------TATAGACTT--AGGGTAATA-GTAAGATCTAC----------------------------AAT-------AGAT----------TTA----------------------------------------------------------------------------------GAAAGATAC----------AA--CTA--------------------------------------------------------------------------AG--------------------------------------------------------------------------------------------TTAG--AT---------------------------------------------------------------------------------------------------------------------T---------------AAGGGAAAATCATAGCTTTTAGGTGGAGTTGACTA-------------------------------------------------AAAGTTGCCT--CTAACAC----------------------TTGGAGGC-------CA-----------------------AA
droEug1 scf7180000409462:615033-615280 - AGGCTTCAAGAACGATGCGAACAGCCTGGAGAACGGTCAATTGGCAGCCGGTAAGTTCAAACAATATA-------------------TA---A----------T----T-----------------------------------C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATAACTGTGCATACTTTAAATTGTGCCGAGGCATTTAAATCTAAAATCC--ATAATTGGATAAATGCTAAG---------------------------------------------------------TAATCGTTTATTAGCATGTGAC----------------------T-----AAAGATTAGAATGAGTCTAGAATAGATTTTAGAGGGCATTGT-GA-------------------------------------------------AATGTTAACT--CTTTTTT----------------------TTGGTGGGCATCATTCA-----------------------GA
droBia1 scf7180000302292:657284-657622 + GGGCTTCAAGAACGACGCCAACAGTCTCGAGAACGGTCAACTGGCTGCCGGTGAGTTGGAACACATA------------------TTC---AT----------T----TGGAACACATATTTGTTTTGGTCTCAAAGTGATTACTTTG----------------------------------------------TATTCT--CAAGGGAT-AATTGGCAGATCTAC----------------------------AAAATTTTAAAG-TTAA----------ATGTAAATTT---AAATTTCCTTGAGATAG-------------------------------------------------CTTAAAAGTGATATTTTAGT------TCCCTCAATTTTTCCCGTTTCCAAAAGTAAACGAACTTTTTTTTTAATAATGTATAGTTGGTA------GAACACAAAA--------------------------------------------------------------------------------------------TCAG--TG---------------------------------------------------------------------------------------------------------------------T---------------AGGGGAAAATTATAGATTTTATGTGGGATTGT-----------------------------------------------------------ACT--CCATCAT----------------------TTGGTGTC-------CA-----------------------GA
droTak1 scf7180000415820:254464-254716 + GGGCTTTAAGAACGACGCCAACAGTCTGGAGAACGGTCAACTGGCAGCCGGTGAGTTTAAAAAATATA-------------------TATA--------TT--TCAGA---------------------------AATCTTTTATGGAGAAA----TAT--------ACT--------------------------------CAAGGGAT-AATTGGCAGGTCTCC----------------------------ATATTATAGGGG-TTATAAGTAATTTAATG------------------------------------------------------------------------------------------------------TTT--------------------------------------------------------------------------TCTTAGTATAA-------------------TATTGATTAAATAGAAAATAGCAATGCACTTTCAAAAAATTCCCCTTGC-TTTAAATC-----------------------------------------------------------------------------------------------------------------------------------CAA---------------------------AT-TTC------AGTTGATAA-------------------------------------------------AAAGATATTT--T----------------------------------------------------------------------
droEle1 scf7180000491214:3374664-3374730 + GGGTTTCAAGAACGACGCCAACAGTCTGGAGAATGGCCAGTTGGCTGCCGGTGAGTTGGAATATTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779932:277969-278219 + GGGCTTCAAGAACGACGCCAACAGTCTGGAGAACGGGCAATTGGCTGCCGGTGAGTTGAAATATTTTT-------------------TA-----------------AA---------------------------ATTTTTTTT-AGCAAAAGGTTGATTCCAAAGGGAACAAGGGATCAGCTATTTGTTTGTATATCATCAT--AGAATCATT-ATAGAAGCTTC----------------------------ATT-------AAA-------------------------------------------------------------------------------------------------TA-----AACTA--------------------------------------------------------------------------TTTTGGAGAGGTCAG--------------------------------------------------------------------------------------------TTAG--TT---------------------------------------------------------------------------------------------------------------------T---------------ATAGCAATATTCTAGTTTTAAGATGGAGTTGTGAC-------------------------------------------------GATG---------GGTCAC----------------------TTAGTGGC-------CA-----------------------GA
droFic1 scf7180000453948:989437-989678 + GGGCTTCAAGAACGACGCCAACAGTCTGGAAAACGGACAATTAGCTGCTGGTGAGTTTAAC------ATAAT------------------------------------T-----------------------------------C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAAT----------------------------------------------AGAATTGAACCGGTGTTAAATCAGGTTAGATTTGTTATAAAAATACCACACATATATTCTAGAGGTTAA-------------------------------------------ATTCGAGATGACGTTTTGC----------------------------------------TAATTTATTTACAAAACTTTCATAACTTTTTATATAAAAAATAATGTTATAAATCGTACT--CCATAAC----------------------TTGGTAGT-------AG-----------------------GA
droKik1 scf7180000302385:1136915-1137119 + GGGCTTCAAGAATGATGCCAATAGTCTGGAGAACGGACAGCTGGCTGCCGGTGAGTTTTTGTTTATA----------------------------------------T---------------------------ACTTTTATT--------------------------------------------------------------AAGCACGTAG---------TCACAAGTTAGGTCTTTTAGAAATAAGTTGGT-------AGGG----------TTAATATAGATTTCTGTAATGATTTTAATGGA-------------------------------------ATTTAAGCTAGGAATAAAAATATGT------ATATAACGATA--------------------------------------------------------------------------TC--------------------------------------------------------------------------------------------TTAT--AT---------------------------------------------------------------------------------------------------------------------TAA---------------------------TA-T-----------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13266:8698565-8698631 + GGGATTTAAGAACGATGCCAATAGTTTGGAGAACGGTCAGCTGGCAGCTGGTGAGTCCCGATATATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396759:129521-129680 - GGGATTCAAGAATGATGCTAACAGCTTGGAGAATGGTCAGCTGGCAGCTGGTGAGTTCCGATATACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-------------------------------------------------------------------------------------------------CA-----------------------------------------------------------------------------------ATCT----------------------------------------------------------------------------------------------------------CCATTATAGG-----------------------------------------GAATA-----------------------TTAT------------------------------------------TGCTTAGGATT--------------------------------AGGGAT-------------------------------------------------TATGCAGAGATT-----TA----------------------TGTGATAA-------TAGAACCTGAAGATGGTTCAGGTGCTT
dp5 3:12196944-12197026 + GGGCTTCAAGAACGATGCCAACAGCCTGGAGAACGGCCAATTGGCTGCCGGTAAGTCTCTACC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-------------------------------------------------------------------------------------------------TA-----------------------------------------------------------------------------------ATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCAGAT-------TT-----------------------AA
droPer2 scaffold_44:380356-380501 + GGGCTTTAAGAACGATGCCAACAGCCTGGAGAACGGCCAATTGGCTGCCGGTAAGTCTCTACC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-------------------------------------------------------------------------------------------------TA-----------------------------------------------------------------------------------ATTTCTCAGATGTAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAC------------------------------------------CGTTCGGT---------------------------------------AG-------------------------------------------------CCACCTGGCT--C---CAAATATTCTTATAATGTAAGAAGATGGGGGGC-------GA-----------------------GA
droWil2 scf2_1100000004558:2605302-2605587 - GGGATTTAAGAATGATGCGAATAGTCTAGAAAATGGTCAACTGGCTGCCGGTAAGTTCCATCATATT--------------------A---ATTCAATACTCTTAAGA----AGCTAT------------------ATCTATGTCGGTTAAT----TTT--------ACT--------------------------TAAATTC--A-----AGTCGGTAGTAATTT----------------------------ACTTTACATTAGAT-TTTAAATATT-------------------------TGAGGATTTCAAAAGAAAGATTCGGCATTATAGATTTAATTAAAAGACTAC---ATAAAGAAATTTACTTCTTGAGACAACTTTTTGAAATT-------------------------------------------------------------------TG--------------------------------------------------------------------------------------------TCAT--AT--------------------------------------------------------------------------------------------------------TGTAAAGAAGAGTTAA---------------------------GT-TTTAGATG--------------------------------------------------------------------------------------------------------------------A-----------------------GT
droVir3 scaffold_12823:581442-581498 - GGGCTTCAAGAATGATGCTAACAGCTTGGAGAACGGTCAACTGGCAGCTGGTAAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:3401833-3402144 + GGGCTTCAAGAATGATGCCAACAGCCTGGAGAATGGACAACTGGCAGCTGGTAAGATCCTAAAATATA-------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATATAATA-------------TGCATAAT-------------------------------------AGTTAAGG---TTATATATA--TAAATTGTTATTCAACATTT--------------------------------------------------------------------------TGTTAGCCTAAGTTCTAGAAAGATGTGTAATTTAGACTCTAT------------------------------------------------AAAACT--AGAATAGAATAGTTGTTAAGCTTCTCCGG--------------TATTTGGCATATACCTTATCGTCTAAGATTTAGTTTA--------------GTCTATAGTTTATCTATAGTTCCAGCTGCTGCTTCGC-----------------------------------AGGCTG-------------------------------------------------CATGCTGCGATTT-GCCTA----------------------TGCGAAGT-------TA-----------------------GA
droGri2 scaffold_15245:9049053-9049335 + GGGCTTCAAAAACGACGCCAACAGTTTGGAGAACGGTCAATTGGCTGCCGGTAAGCGTTAT------ATAGTTGAGATCTCAATATTC---AT----------T----TAAA----------------------------------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAAT---AGATTAATATCTATTTGCTTAGACTACAATA--------------------------------------------------------------------------TA--------------------------------------------------------------------------------------------CTAA--ATTATAA-----GGCAAGATCCTCAAA--------------T-TTCGTATCACAAATGATCGCGTAAAAATTAGCTTATAATTTAGTAGCAAACTCTTAGTAAACTTATAGTGTATAGTCAA---------------------------GC-TTCACAGGATGCGGACAC-------------------------------------------------CTGTGCAAGT--C---GAC----------------------TTTTAATC-------TT-----------------------AA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GGGCTTCAAGAATGACGCCAACAGTCTGGAGAATGGTCAACTAGCTGCTGGTGAGTTACGAAATTTAC-------------------TATG--------TT--TAAAG---------------------------AATAATTATTGGA--------------------CA--------------------------------TAGGGGGAAATATGTCAGATCTAT----------------------------AAT-------TGAT----------TAAATATAATACT---TAATAATTTACATGGT-------------------------------------TGGAAAGC---ATATAGAAATATATTTGCTAAAACAATAATA--------------------------------------------------------------------------TG--------------------------------------------------------------------------------------------TTAG--AT---------------------------------------------------------------------------------------------------------------------TAA---------------------------GA-TTCAGGTGGAGCTGGCAA-------------------------------------------------AAAGCTGTCT--T---CAC----------------------TTGGAGGC-------CA-----------------------AASizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
............TGACGCCAACAGTCTGGAGAATGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
droSec2
GGGCTTTAAGAATGACGCCAACAGTCTGGAGAATGGTCAACTAGCTGCTGGTGAGTTACGAAATTTAC-------------------TATG--------TT--TAAAG---------------------------AATAATTATTGTATATA----------------------------------------------------------------------------------------------------------------TGAT----------TAAATATAAAACC---TAATAATTTTCATGGT-------------------------------------TGGAAAGC---GTATAGAAATATATATGCTAAAACAATAATA--------------------------------------------------------------------------TG--------------------------------------------------------------------------------------------TTAG--AT---------------------------------------------------------------------------------------------------------------------TAA---------------------------GA-TTCAGGTGGAGCTGGCAA-------------------------------------------------AAAGCTGTCT--C---CAC----------------------TTGGAGGC-------CA-----------------------AASizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
No Reads
dm3
GGGCTTCAAGAATGACGCCAACAGTCTGGAGAATGGTCAACTAGCTGCTGGTGAGTTACGAAATTTAC-------------------TATG--------TTT-TTAAG---------------------------AAGAATTATTGTATATA----TGG--------ACA--------------------------------TAAGGGGAAATATGTCAGATCTAC----------------------------AAT-------TTAT----------TTAATATAATATT---TAATATTATTAATGTT-------------------------------------TGGAAAGC---GTATAGAAATATATTTGCTAAAACAATAATA--------------------------------------------------------------------------TG--------------------------------------------------------------------------------------------TTAG--AT---------------------------------------------------------------------------------------------------------------------TAA---------------------------GA-TTCAGGTGGAGCTAACAA-------------------------------------------------AAAGCTGTCT--C---CAC----------------------TTGGAGGC-------CA-----------------------AASizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
....................ACAGTCTGGAGAATGGTCAACTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------------------------------------------------------------------------------------------------------------------TAA---------------------------GA-TTCAGGTGGAGC..........................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GTCTGGAGAATGGTCAACTAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ATGACGCCAACAGTCTGGAGAATGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
......................AGTCTGGAGAATGGTCAACTAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AGTCTGGAGAATGGTCAACTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA-TTCAGGTGGAGCTAACAA-------------------------------------------------A..................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG--AT---------------------------------------------------------------------------------------------------------------------TAA---------------------------GA-TTCAGGTGGAG...........................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGCCAACAGTCTGGAGAATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................AGAATGGTCAACTAGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............CGCCAACAGTCTGGAGAATGGTCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CAACAGTCTGGAGAATGGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................AACAGTCTGGAGAATGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGCCAACAGTCTGGAGAATGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AGAATGACGCCAACAGTCTGGAGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GCTTCAAGAATGACGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................AATATGTCAGATCTAC----------------------------AAT-------TTAT----------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TGACGCCAACAGTCTGGAGAATGGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TGACGCCAACAGTCTGGAGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CAACAGTCTGGAGAATGGTCAACTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TT-------------------------------------TGGAAAGC---GTATAGAAATAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.....................CAGTCTGGAGAATGGTCAACTAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AACAGTCTGGAGAATGGTCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................TCTGGAGAATGGTCAACTAGCTGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACAGTCTGGAGAATGGTCAACTAGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AACAGTCTGGAGAATGGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AACAGTCTGGAGAATGGTCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................GCCAACAGTCTGGAGAATGGTCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................TGGAGAATGGTCAACTAGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................CAACAGTCTGGAGAATGGTCAACTAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GTCTGGAGAATGGTCAACTAGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CAGTCTGGAGAATGGTCAACTAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GAATGACGCCAACAGTCTGGAGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CCAACAGTCTGGAGAATGGTCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..........AATGACGCCAACAGTCTGGAGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTCAAGAATGACGCCAAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
droEre2
GGGCTTCAAGAATGACGCCAACAGTCTGGAGAATGGTCAACTAGCTGCTGGTGAGTTACAAAATTTGC-------------------TATA--------TT--TAAAG---------------------------AATTTTTTT--------------------------------------------------------------GGGTAATAAG---------C----------------------------CAT-------AGAT----------TTAATATAATTTT---AAATATTATTCAGGGGT-------------------------------------------------TTCAAAAGATATATTCTAACA-AAAAAAA--------------------------------------------------------------------------AG--------------------------------------------------------------------------------------------TTAG--AT---------------------------------------------------------------------------------------------------------------------T---------------AAGGGAAAATCATAGTTTTTAGGTGGAGTTGACAA-------------------------------------------------AAAGGTGCCT--CCACCAC----------------------TTGGAGT----------------------------------ASizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
................GCCAACAGTCTGGAGAATGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...............CGCCAACAGTCTGGAGAATGGTCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
................GCCAACAGTCTGGAGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
droYak3
GGGTTTTAAGAACGACGCCAACAGTCTGGAGAATGGTCAATTAGCTGCTGGTGAGTTACAAAATGTGT-------------------TATG--------TT--TAAAG---------------------------AGTGATTTTTTTA----------------------------------------------TATAGACTT--AGGGTAATA-GTAAGATCTAC----------------------------AAT-------AGAT----------TTA----------------------------------------------------------------------------------GAAAGATAC----------AA--CTA--------------------------------------------------------------------------AG--------------------------------------------------------------------------------------------TTAG--AT---------------------------------------------------------------------------------------------------------------------T---------------AAGGGAAAATCATAGCTTTTAGGTGGAGTTGACTA-------------------------------------------------AAAGTTGCCT--CTAACAC----------------------TTGGAGGC-------CA-----------------------AASizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
..................CAACAGTCTGGAGAATGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
...............CGCCAACAGTCTGGAGAATGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...........ACGACGCCAACAGTCTGGAGAATGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
...................AACAGTCTGGAGAATGGTCAATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
droEug1
AGGCTTCAAGAACGATGCGAACAGCCTGGAGAACGGTCAATTGGCAGCCGGTAAGTTCAAACAATATA-------------------TA---A----------T----T-----------------------------------C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATAACTGTGCATACTTTAAATTGTGCCGAGGCATTTAAATCTAAAATCC--ATAATTGGATAAATGCTAAG---------------------------------------------------------TAATCGTTTATTAGCATGTGAC----------------------T-----AAAGATTAGAATGAGTCTAGAATAGATTTTAGAGGGCATTGT-GA-------------------------------------------------AATGTTAACT--CTTTTTT----------------------TTGGTGGGCATCATTCA-----------------------GASizeHit CountTotal NormTotal
No Reads
droBia1
GGGCTTCAAGAACGACGCCAACAGTCTCGAGAACGGTCAACTGGCTGCCGGTGAGTTGGAACACATA------------------TTC---AT----------T----TGGAACACATATTTGTTTTGGTCTCAAAGTGATTACTTTG----------------------------------------------TATTCT--CAAGGGAT-AATTGGCAGATCTAC----------------------------AAAATTTTAAAG-TTAA----------ATGTAAATTT---AAATTTCCTTGAGATAG-------------------------------------------------CTTAAAAGTGATATTTTAGT------TCCCTCAATTTTTCCCGTTTCCAAAAGTAAACGAACTTTTTTTTTAATAATGTATAGTTGGTA------GAACACAAAA--------------------------------------------------------------------------------------------TCAG--TG---------------------------------------------------------------------------------------------------------------------T---------------AGGGGAAAATTATAGATTTTATGTGGGATTGT-----------------------------------------------------------ACT--CCATCAT----------------------TTGGTGTC-------CA-----------------------GASizeHit CountTotal NormTotal
No Reads
droTak1
GGGCTTTAAGAACGACGCCAACAGTCTGGAGAACGGTCAACTGGCAGCCGGTGAGTTTAAAAAATATA-------------------TATA--------TT--TCAGA---------------------------AATCTTTTATGGAGAAA----TAT--------ACT--------------------------------CAAGGGAT-AATTGGCAGGTCTCC----------------------------ATATTATAGGGG-TTATAAGTAATTTAATG------------------------------------------------------------------------------------------------------TTT--------------------------------------------------------------------------TCTTAGTATAA-------------------TATTGATTAAATAGAAAATAGCAATGCACTTTCAAAAAATTCCCCTTGC-TTTAAATC-----------------------------------------------------------------------------------------------------------------------------------CAA---------------------------AT-TTC------AGTTGATAA-------------------------------------------------AAAGATATTT--T----------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GGGTTTCAAGAACGACGCCAACAGTCTGGAGAATGGCCAGTTGGCTGCCGGTGAGTTGGAATATTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GGGCTTCAAGAACGACGCCAACAGTCTGGAGAACGGGCAATTGGCTGCCGGTGAGTTGAAATATTTTT-------------------TA-----------------AA---------------------------ATTTTTTTT-AGCAAAAGGTTGATTCCAAAGGGAACAAGGGATCAGCTATTTGTTTGTATATCATCAT--AGAATCATT-ATAGAAGCTTC----------------------------ATT-------AAA-------------------------------------------------------------------------------------------------TA-----AACTA--------------------------------------------------------------------------TTTTGGAGAGGTCAG--------------------------------------------------------------------------------------------TTAG--TT---------------------------------------------------------------------------------------------------------------------T---------------ATAGCAATATTCTAGTTTTAAGATGGAGTTGTGAC-------------------------------------------------GATG---------GGTCAC----------------------TTAGTGGC-------CA-----------------------GASizeHit CountTotal NormTotal
No Reads
droFic1
GGGCTTCAAGAACGACGCCAACAGTCTGGAAAACGGACAATTAGCTGCTGGTGAGTTTAAC------ATAAT------------------------------------T-----------------------------------C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAAT----------------------------------------------AGAATTGAACCGGTGTTAAATCAGGTTAGATTTGTTATAAAAATACCACACATATATTCTAGAGGTTAA-------------------------------------------ATTCGAGATGACGTTTTGC----------------------------------------TAATTTATTTACAAAACTTTCATAACTTTTTATATAAAAAATAATGTTATAAATCGTACT--CCATAAC----------------------TTGGTAGT-------AG-----------------------GASizeHit CountTotal NormTotal
No Reads
droKik1
GGGCTTCAAGAATGATGCCAATAGTCTGGAGAACGGACAGCTGGCTGCCGGTGAGTTTTTGTTTATA----------------------------------------T---------------------------ACTTTTATT--------------------------------------------------------------AAGCACGTAG---------TCACAAGTTAGGTCTTTTAGAAATAAGTTGGT-------AGGG----------TTAATATAGATTTCTGTAATGATTTTAATGGA-------------------------------------ATTTAAGCTAGGAATAAAAATATGT------ATATAACGATA--------------------------------------------------------------------------TC--------------------------------------------------------------------------------------------TTAT--AT---------------------------------------------------------------------------------------------------------------------TAA---------------------------TA-T-----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
GGGATTTAAGAACGATGCCAATAGTTTGGAGAACGGTCAGCTGGCAGCTGGTGAGTCCCGATATATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
.........................TTGGAGAACGGTCAGCTGGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.........................TTGGAGAACGGTCAGCTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....................TAGTTTGGAGAACGGTCAGCTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
........................TTTGGAGAACGGTCAGCTGGCAGCTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.......................GTTTGGAGAACGGTCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
droBip1
GGGATTCAAGAATGATGCTAACAGCTTGGAGAATGGTCAGCTGGCAGCTGGTGAGTTCCGATATACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-------------------------------------------------------------------------------------------------CA-----------------------------------------------------------------------------------ATCT----------------------------------------------------------------------------------------------------------CCATTATAGG-----------------------------------------GAATA-----------------------TTAT------------------------------------------TGCTTAGGATT--------------------------------AGGGAT-------------------------------------------------TATGCAGAGATT-----TA----------------------TGTGATAA-------TAGAACCTGAAGATGGTTCAGGTGCTTSizeHit CountTotal NormTotal
No Reads
dp5
GGGCTTCAAGAACGATGCCAACAGCCTGGAGAACGGCCAATTGGCTGCCGGTAAGTCTCTACC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-------------------------------------------------------------------------------------------------TA-----------------------------------------------------------------------------------ATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCAGAT-------TT-----------------------AASizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
..........................TGGAGAACGGCCAATTGGCTGCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000001000
droPer2
GGGCTTTAAGAACGATGCCAACAGCCTGGAGAACGGCCAATTGGCTGCCGGTAAGTCTCTACC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-------------------------------------------------------------------------------------------------TA-----------------------------------------------------------------------------------ATTTCTCAGATGTAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAC------------------------------------------CGTTCGGT---------------------------------------AG-------------------------------------------------CCACCTGGCT--C---CAAATATTCTTATAATGTAAGAAGATGGGGGGC-------GA-----------------------GASizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
.....TTAAGAACGATGCCAACAGCCTGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
droWil2
GGGATTTAAGAATGATGCGAATAGTCTAGAAAATGGTCAACTGGCTGCCGGTAAGTTCCATCATATT--------------------A---ATTCAATACTCTTAAGA----AGCTAT------------------ATCTATGTCGGTTAAT----TTT--------ACT--------------------------TAAATTC--A-----AGTCGGTAGTAATTT----------------------------ACTTTACATTAGAT-TTTAAATATT-------------------------TGAGGATTTCAAAAGAAAGATTCGGCATTATAGATTTAATTAAAAGACTAC---ATAAAGAAATTTACTTCTTGAGACAACTTTTTGAAATT-------------------------------------------------------------------TG--------------------------------------------------------------------------------------------TCAT--AT--------------------------------------------------------------------------------------------------------TGTAAAGAAGAGTTAA---------------------------GT-TTTAGATG--------------------------------------------------------------------------------------------------------------------A-----------------------GTSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
No Reads
droVir3
GGGCTTCAAGAATGATGCTAACAGCTTGGAGAACGGTCAACTGGCAGCTGGTAAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
...............TGCTAACAGCTTGGAGAACGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
...........ATGATGCTAACAGCTTGGAGAACGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000010000000000000000000000000000000000000000000000000
..........................TGGAGAACGGTCAACTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000001000000000000000000000000000000000000000000000000000
droMoj3
GGGCTTCAAGAATGATGCCAACAGCCTGGAGAATGGACAACTGGCAGCTGGTAAGATCCTAAAATATA-------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATATAATA-------------TGCATAAT-------------------------------------AGTTAAGG---TTATATATA--TAAATTGTTATTCAACATTT--------------------------------------------------------------------------TGTTAGCCTAAGTTCTAGAAAGATGTGTAATTTAGACTCTAT------------------------------------------------AAAACT--AGAATAGAATAGTTGTTAAGCTTCTCCGG--------------TATTTGGCATATACCTTATCGTCTAAGATTTAGTTTA--------------GTCTATAGTTTATCTATAGTTCCAGCTGCTGCTTCGC-----------------------------------AGGCTG-------------------------------------------------CATGCTGCGATTT-GCCTA----------------------TGCGAAGT-------TA-----------------------GASizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
No Reads
droGri2
GGGCTTCAAAAACGACGCCAACAGTTTGGAGAACGGTCAATTGGCTGCCGGTAAGCGTTAT------ATAGTTGAGATCTCAATATTC---AT----------T----TAAA----------------------------------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAAT---AGATTAATATCTATTTGCTTAGACTACAATA--------------------------------------------------------------------------TA--------------------------------------------------------------------------------------------CTAA--ATTATAA-----GGCAAGATCCTCAAA--------------T-TTCGTATCACAAATGATCGCGTAAAAATTAGCTTATAATTTAGTAGCAAACTCTTAGTAAACTTATAGTGTATAGTCAA---------------------------GC-TTCACAGGATGCGGACAC-------------------------------------------------CTGTGCAAGT--C---GAC----------------------TTTTAATC-------TT-----------------------AASizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
No Reads

Generated: 05/19/2015 at 12:32 PM