ID:

dsi_23401

 Coordinate:

2r:14717567-14717828 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.8 -23.5 -23.4

Flybase annnotation

three_prime_UTR [2r_14716897_14718082_-]; exon [2r_14716897_14719794_-]

No Repeatable elements found

Sense Strand Reads

##########################################################################################################################################################################################################################################################################################################################################################################
ACTCCAGCAAAAGTCGGAGGATACAGCTCGAACGCGGGCGGCTTGGTTATGTATGTATGCTTAAGAGGAAAAAACCCACAAACAAAATTGCAATTTTCACTATTAGGATGGAATCCCATATTCTCGCTGTCCAAATTCAAATTAGACGCTCTGAAAATTGCAATTTTACATTTACGTTTTGTTATGTACTGTATTTGTTTTTAATCGCCTCCGCAAGGCGGGTCATTACTTAGTAGTATTTATTAAGCACAGGCTCGTCATTTTCCACAGCCCGAGTGAATGAATCACTTCAACTTCAAATGGTGTTTTCAGATTGCTACCCTATTTGGTGGGGTGCGGTCCCAAAACAGCTGCTCCACTGG
*********************************************************************************************************************************************...((((.((((......((((...((((..(((((......))))).)))).))))......((((((.....)))))).......(((((((.....)))))))..))))..))))......************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 M024
male body		 M023
head
 SRR553488
RT_0-2 hours eggs
 M025
embryo
.............................................................................................................................................................................................................................................................................................................................TACCCTATTTGGTGGGGTGCGGTC..................... 24 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................TATTAAGCACAGGCTCGTCATTTTC................................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................TCAACTTCAAATGGTGTTTTCAAGA................................................ 25 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................GTGCGGTCCCAAAACAGC........... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................ATTGCTACCCTATTTGGT................................ 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CGGGTCATTACTTAGTAGTATT.......................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................CACAGGCTCGTCATTTTCCA............................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................TTAAGCACAGGCTCGTCATTTTCCACA............................................................................................. 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................................................TATTAAGCACAGGCTCCTCATTTTC................................................................................................. 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................................TACTTAGTAGTATTTATTAAGCACAGGC............................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TTAGACGCTCTGAAAATTGCAATTTT................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................CACTATTAGGATGGAATCCC..................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................TTATTAAGCACAGGCTCGTCATTTTC................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................TTAAGCACAGGCTCGTCATTTTCC................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................TTAAGCACAGGCTCGTCATTTT.................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................CAGGACGAACGCTGGCGGCT............................................................................................................................................................................................................................................................................................................................... 20 3 10 0.70 7 0 0 0 0 0 0 0 4 2 0 1
........................AGGACGAACGCGGGCGGCGT.............................................................................................................................................................................................................................................................................................................................. 20 3 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
............................CGAACGCTGGCGGCGTGCTT.......................................................................................................................................................................................................................................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0
......................TCAGGACGAACGCGGGCGGC................................................................................................................................................................................................................................................................................................................................ 20 3 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................TAGACGCTCTGAAAG............................................................................................................................................................................................................. 15 1 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0
............................CGAACGCTGGCGGCGTG............................................................................................................................................................................................................................................................................................................................. 17 2 16 0.13 2 0 0 0 1 0 0 0 0 0 1 0
.........................................................TGCTTAAAAGGAAAAAA................................................................................................................................................................................................................................................................................................ 17 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0
...........................ACGAACGCTGGCGGCATGG............................................................................................................................................................................................................................................................................................................................ 19 3 18 0.06 1 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................................TTGTTGTGTCCTGTATTTATT................................................................................................................................................................... 21 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
.......................CAGGGCGAACGCTGGCGGC................................................................................................................................................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0
............................CGAACGCTGGCGGCGTGCT........................................................................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

TGAGGTCGTTTTCAGCCTCCTATGTCGAGCTTGCGCCCGCCGAACCAATACATACATACGAATTCTCCTTTTTTGGGTGTTTGTTTTAACGTTAAAAGTGATAATCCTACCTTAGGGTATAAGAGCGACAGGTTTAAGTTTAATCTGCGAGACTTTTAACGTTAAAATGTAAATGCAAAACAATACATGACATAAACAAAAATTAGCGGAGGCGTTCCGCCCAGTAATGAATCATCATAAATAATTCGTGTCCGAGCAGTAAAAGGTGTCGGGCTCACTTACTTAGTGAAGTTGAAGTTTACCACAAAAGTCTAACGATGGGATAAACCACCCCACGCCAGGGTTTTGTCGACGAGGTGACC
*************************************************************************************************...((((.((((......((((...((((..(((((......))))).)))).))))......((((((.....)))))).......(((((((.....)))))))..))))..))))......********************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 O001
Testis
 M024
male body		 M023
head
 SRR902008
ovaries
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
.......................................................................................................................................................................................................................................................GTGTCCGAGCAGTAAAAGGTG.............................................................................................. 21 0 1 7.00 7 7 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................GTCCGAGCAGTAAAAGGTGTC............................................................................................ 21 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................TGTCCGAGCAGTAAAAGGTGT............................................................................................. 21 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................AATTCGTGTCCGAGCAGTAAAAGGTGT............................................................................................. 27 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0
........................................................................................................................................................................................................................................................TGTCCGAGCAGTAAAAGGT............................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................CCAGGGTTTGGTCCACGAGATG... 22 3 1 2.00 2 0 0 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................TTGTCCGAGCAGTAAAAGGTGT............................................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................TGTCGGGCTCACTTACTTACT........................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................TCCGAGCAGTAAAAGGTGTC............................................................................................ 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................TTGTCCGAGCAGTAAAAGGTGTC............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GTTCCGCCCAGTAATGAAT.................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................ATCATCATAAATAATTCGTGT............................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................GGGTATAAGAGGGACAGGTTT................................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................TCGGGCTCACTTACTTAGTGAA........................................................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................CGTGTCCGAGCAGTAAAAGGTGT............................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................AAAGGTGTCGGGCTCACTTAC................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................TCCGAGCAGTAAAAGGTGTCGGGCTC...................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................CAGGGTTTGGTCCACGAGATG... 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................TTTTGTCCGAGCAGTAAAAGGTGT............................................................................................. 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....TCGTTTTCAGCCTCCTATGTC................................................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................................TTTGTCCGAGCAGTAAAAGGTGTC............................................................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................TCATCATAAATAATTCGTGTC.............................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................CCGAGCAGTAAAAGGTGTCG........................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................TTGTCCGAGCAGTAAAAGGTG.............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................TTAGGGCAGTTGCAGTTTACC........................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................AGGGTATGAGATCGACTGGT..................................................................................................................................................................................................................................... 20 3 3 0.33 1 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................AAATTGGCGGCGGCGTTC................................................................................................................................................. 18 2 9 0.11 1 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................................................................AAAAGGTGGCGGGCT....................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0
............................................................................GTGTAAGTTTTAACGTTAA........................................................................................................................................................................................................................................................................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1
................................................................................................................................CAGGTTTAAATTTAAT.......................................................................................................................................................................................................................... 16 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0
.................................................................................................................AGGGTATGAGATCGAC......................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0
.................................................................................................................AGGGTAAAAGAGCGA.......................................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0
....................TATCTTGAGCGTGCGCCC.................................................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................TGGCGGCGGCGTTCCG............................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:14717517-14717878 - dsi_23401 ACTCCAGCAAAAGTCG---GAGGAT-ACAGCTCGAA--CGCGGGCGG----CT-TGGTTATGTATGTATGCTTAAGAGGAAAAAACCC-ACAA-AC-------AAAATTGCAATTTTCACTATTA-GGATG----------------------------------------------------------GAATCC--------------------------------------------CATA-TTC-------------TC-G-----C---TGTCCAAATTCAA-----A-TTAG--ACGCTCTGAAAATTGCAATTTTACATTTA----------------CGTTTTGT-TATGTACTGTATT------TGTTTT-TAATC------------GCCTCCG--------CA--A----GGCGGGT----------CATTACTTAGTAGT--ATTTAT-T--------------------AAGCACAGGCTCGTCA-TTTTCCACAGCCCGAGTGAATGAATCACT------TCAACTTCAAA-TGGTGTTT-TCAGATTGCTACCCTATTTGGTGGGGTGCGGTCCCAA---AACAGCTGCTC----CACTG----G
droSec2 scaffold_1:11526468-11526829 - ACTCCAGCAAAAGTCG---GAGGAT-ACAGCTCGAA--CGCGGGCGG----CT-TGGTTATGTATGTATGCTTAAGAGGAAAAAACCC-ACAA-AC-------AAAATTGCAATTTTCAATATTA-GGATG----------------------------------------------------------GAATCC--------------------------------------------CATA-TTC-------------TC-G-----C---TGTCCAAATCCAA-----A-TTAG--ACGCTCTGAAAATTGCAATTTTACATTTA----------------CGTTTTGT-TATGTACTGTATT------TGTTTT-TAATC------------GCCTCCG--------CA--A----GGCGGGT----------CATTACTTAGTAGT--AATTAT-T--------------------AAGCACAGGCTCGTCA-TTTTTCACAGCCCGAGTGAATGAATCACT------TCAACTTCAAA-TTATGTTT-TCAGATTGCAACCCTATTTGGTGGGGTGCGGTCCCAA---AACAGCTGCTC----CACTT----G
dm3 chr2R:14036622-14036976 - ACTCCAGCAAAAGTCG---GAGGAT-ACAGCTCGAA--CGCGGGCGG----CT-TGTTTATGTATGTATGCTTAAGAGGAAAACACCC-ACAC-AC-------AAAATTGCAATTTTCACCATGA-G---T----------------------------------------------------------GAATCC--------------------------------------------CATA-CTC-------------TC-C-----C---GGTCCAAATCCAA-----A-TTGG--ACGCTCTGAAAATTGCAATTTTACATTTA----------------CGTTTTGT-TATGTACTGTATT------TGTTTT-TAGTC------------GCCTTCG--------CA--A----GAAGGGT----------CATTACTTAGTAGT--ATTTAT-T--------------------ATGCACAGGCTCGTCA-TTTTTAACAGCCCGAG----TGAATCACA------TCAACTTCAAA-TGGTGTTT-TCAGATTGCCACCCTAATTGGTGGGGTGCGGTCCCAA---AACAGCTGCTC----CACTG----G
droEre2 scaffold_4845:8256255-8256606 - ACTCCAGCAAAAGTCG---GAGGAT-GCAGCTCGAA--C--GGGCAG----CT-TGTTTATGTATGTATGCTTAAGAGCCAAACACCC-ACAC-ACA------AAAATTGCAATTTTCACCTTTA-G---G----------------------------------------------------------GAATCT--------------------------------------------CAT--------------------------------------ATTCAA-----A-TTAG--ACGCCCTGAAAATTGCAATTTTACATTTA----------------CGTTTTGT-TATGTACTGTATT------TGTTTG-TAATT------------CCCTCCG--------CA--A----GG-GGGG----------CATTACTTAGTAGT--ATTTAT-TGTTA-GATTGAA-CAATATTCTGCACAGACTCGTCA-TTTTTAACACACCGAG----TGAATCACT------TCAACT-CGAA-TGGTGTTT-TCTGATTGCCGCCCTAT---GTGGGGTGGGGTCCCAA---AACAGCTGCTC----CATTG----G
droYak3 2R:15149267-15149638 + ACTCCAGCGAAAGTCG---GAGGAT-ACAGCTCGAA--C--GGGCGG----CT-TGTTTATGTATGTATGCTTAAGAGGAAAACACCC-ACAC-ACAA-----AAAATTGCAATTTTTATCTTTA-G---G----------------------------------------------------------GAATCG--------------------------------------------CATA-TT---------------C-G-----C---TGTCTAAATCCAA-----A-TTGG--ATGGCCTGAAAATTGCAATTTGACATTTA----------------CGTTTTGT-TATGTACTGTATT------TGTTTG-TAATC------------CCTTCCG--------CA--ATTGGGAGGGGC----------CATTACTTAGTAGT--ATTTAT-TGTTA-GATTGAA-CAACATTCTGCACAGGCTCGTCA-TTTTTCACAGACCGAG----TGAATCACT------TCAACT-CAAATTGTTGATT-TCAGATTGCCGCCCTT---AATGGGGTGGGGTTCCAA---AACAGCTGCTC----CATTG----G
droEug1 scf7180000409672:1058204-1058620 + TCTCTAGCAAAAGCCG---GAGGAT-ACTGCTCGAG--CCCGTGACG----TT-TATGTATGTATGTTTGTTTAGGAGGAAACCACCCAAAAC-TC-------AAAATTGCAATTTTCACCTTTTAG-A--AGATTCTATTTCGTGGG------AATCAACATT-TT--------------------------T---------------G-------------------------AGCTCAT--TTTT-GCA-TTTG-TT-----ACAGC---AGTCTGAACTAAA-----A-TGAG--ACGCTATGAAAATTGCAATTTAATATTTA----------------CGTTTTGT-TATGTACTGTATT------TGTTTA-TAATTA-AC-------CCCT----T---ATCCC---A-----A-GGGG----------AATTATTTCGTAGT--ATTTAT-TGTTC-GATTCAACCAACATTCTGCCCAGGCTCGTAA-CTTTTTATATCCCCAGAA--TGAATCACT------TCGAAG-TAAT-TGGTGTTTTTTAGATTGTCGCCCTAT--ATTTGGGTGGGGTCTGAA---AACAGCTGCTC----TATCG----G
droBia1 scf7180000301754:2500178-2500525 + ACTCCAGCAGAAGCCG---GAGGATTACTGCTCCAA--G-AGGGCAG----TG-GGTTTATGTATGTATGCTTAAGAGGAAACCACCC-ACAT-AC-------AAAATTGCAATTTTCACCTTTT-GGAGAGGATTCTATTTAGTAGC------CATCGAAAT------------------------------T---------------G-------------------------ATCTGATG-TTTTGGCCTTTTGGG-GC-ACACAGC---TGTCTAAATTAAA-----A-TGAG--ACGCTCTGAAAATTGCAATTTTGCATTTA----------------CGTTTTGT-TATGTACTGTATTTGTATCTGTTTG-TAACTAAGC--------CCT----T---G-C-CATCA-----A-GGGG----------TATTATTTCGTAGT--ATTTAT-TGTTA-GATTCAA-CAACATTCTGCCCAGGCTC---------------------------------------------------------------------------------------------TCGAA---ACCAGCTGCTC----CATCG----G
droTak1 scf7180000415795:396877-397190 - CT---GGCCAAGGCCGGCGGAGGATCACTGCTCCAA--AATGGGCAG----TG-TGTTTATGTATGTATGCTTAAGAGGAAACCACCC-ACAT-AC-------AAAATTGCAATTTTCACCCCTTAG-A--GGATTCTATTTATTA-----------------------------------------------------------------------------------------------------C-GCC-TTCA-AT-----GCAGC---TGTCTAAATCGAA-----A-TGAG--ACGCTCTGAAAATTGCAATTTTGCATTTA----------------CGTTTTGT-TATGTACTGTATT------TGTTTG-TAATTAAGC-------CCCC----T---TC---ACCA-----A-GGGT----------TATTATTTCGTAGT--ATTTAT-TGTTA-GATTCAA-CAACATTCTACCCAGGCTCGCC------------------------------------------------------------------------------------------CTCAA---AACAGCTGCTC----TTTCG----G
droEle1 scf7180000491214:164349-164766 + CTGCCAGCAAAAGCCG---GAGGAT-AGCGCGCAAA--C--GGGCGG----CA-TGTTTATGTATGTATGCTTAAGAGAAAATCACCC-ACAC-AT-------AAAATTGCAATTTTCACCTTTTAG-A--GGAATGTATTTATTAGC------AA-CAAAATGGCT--------------------------T---------------A-------------------------AGCTAATA-TTTT-GTGTCTTG-GT-----ACAGT---CGTTTAATTTTAA-----A-TGTA--ACGCTCCGAAAATTGCAATTTTACATTTA----------------GGTTTTGT-TATGTACTGTATT------TGTTTG-TAATTA-GC----TCCCCCT--------TTCCCA--A----AA-GGGG----------TATTATTTCGTAGTTTATTTAT-TGTTA-GATGCAA-CAACATTCTGCCCAGGCTCGCAACTTTTTCATAGCCCGAGTG--TGAATCACT------TCGGAG-TAAT-TAATGTTT-TGAGATTATCACCTTAT---GTAGGGTGGGGTCTCAA-AAAACAGCTGCTC----TA--------
droRho1 scf7180000779949:68257-68668 + CTTCCAGCAAAAGCCG---GAGGAT-ACCGCTCGAA--C--GGGCGG----CG-TGTTTATGTATGTATGCTTAAGAGGAAACCACCC-ACAC-AT-------AAAATTGCAATTTTCACCTTTTAG-A--GGAATCTATTTATCAGC------AACCAAAATT-AT--------------------------T---------------G-------------------------AGCTAATA-TTTT-GCGTTTTG-GT-----ACAGT---TGTTAAAATTAAA-----A-TGTG--ACGCTCTGAAAATTGCAATTTTACATTTA----------------CGTTTTGT-TATGTACTGTATT------TGTTTG-TATTTA-GC-------CCCC----T---TCC-CA--A-----A-GGGG----------TATTATTTTGTAGT--ATTTAT-TGTTA-GATGCAA-CAACATTCTGCCCAGGCTCGCAACTTTTTCATAACCCGAGCG--TGAATCACT------TCGGAG-TAAA-TGGTGTTT-CGAGATTGTCACCCCA-----TGGGGTGGGGTCTTAA---AACAGCTGCTC----TATCG----G
droFic1 scf7180000453948:1400300-1400706 + TCTCCAGCGATAACCG---GACGAT-ACCGCTCATA--G--GGGCCC----CG-TGTTTATGTATGTATGCTTAAGAGGAAACCACCC-ACAC-ACA------AAAATTGCAATTTTCATTA----G-A--GGAATCTATTTATTGGC------AAACCAAAT------------------------------T---------------G-------------------------AACTTTTC-TTTT-GCT-TTTG-GT-G-GCAAAGT---AGTTCAAATTTCA-----A-TGTG--AAGCTCTGAAAATTGCAATTTTACACTTA----------------CGTTTTGT-TATGTAATGTATT------TGTTTA-TAATAA-GC-----------TCTGT---TT--CT--A-----A-GGGG----------TATTTCTTCGTTGT--ATTTAT-TGTTA-GAAGCGA-CAACATTCTGCCCAGGCTCGAAACTTTTTCATAACCCCAGAG--TGAATCACT------TCTGAG-TAAG-TGGTGTTA-TGATATGCCCGCCCTA-----TGGGGAGGGGTCTAAA---AACAGCTGCAC----TATCG----G
droKik1 scf7180000302682:1219893-1220273 - GCTCGTGGG--AGTGG---AGTGAAATCTGCTCCAG--C--GAGCCCTGTGTTTTGTGTATG--TATATGTTTAAGAGGAAACCCCCA-AAAA-ACAAAAACAAAAATTGCAATTTTCAAAG---------GGTATTTATTTTAGACC------AA-AAAAAGA-GTAGA-------------------GAATCA-------------------------------------------------ATTT-GC--TTTG-CT-----GCAGATGTT-TTTTAATTCAA-----A-TGTGACACGGTCTGGAAATTGCAATTTAAG-CTTAATTTTCTTGTTGTA-------TGTATATGTAAT-----TGTATTTGTTTA-TAACTG-GTAGCATGCCCCG----TGCATC-CC---C-----A-GGGGTATTATTACGTATTATTTCATAGT--ATTTATTTGTTAAGAGGCA----------------------------------------------TAAATCACACACTTTGCGGAA-TAAG-TAAGGTCT------------------------------T--CTCGGTAGAACAGCTGCCC----C---------
droAna3 scaffold_13266:2780548-2780927 - CTCCCAGCGAAGGCCG---TAAGGA--------------------AC----CG-TGTTAATGTATGTATGTTTAGGAGGAAACAAGAA-AGAT-TCAA-----AAAATTGCAATTTTCACCCAA--G-A--GAAAAAAAAAA---------------------AC-AAGAAATTTGTCGTCAAAATTATTCTTT----G-TTTT--TT---------------------------AAATAATTATTTG-CCC-TTTGGAT---GAAAAAT---TGTTAAAATTAAA-----AATGTA--ACGCTCTGAAAATTGCAATTTTAAGCTT-----------------CGATTTGT-TATTTATTGTATT------TATTTTTTAACTA-GC-------CCTC----T---T---CG--A----TG-GGGA---TATTATGTATTAATTTTTAGT--ATTTAT-CATTA-GATGCAT-CAACATTCTGTCTGGGTTCGCACCTTCTT--------------------------------------------------------------------TCAGAGATCTGGGGTCTCAG---GGCAACTGCCCGCCCAATCGTCGTG
droBip1 scf7180000396427:1262541-1262916 - -CTCCAGCGAAGGCCG---CAA-----TCGCAA---------GGAAC----CG-TGTTAATGTATGTATGTCTAGGAGGAAACAACAA-AGAT-TCAA-----AAAATTGCAATTTTCACCCAA--G-A--GA------------------------------AC-AAG-AATTTGTCGACAAAATTATT---T----GGTCTTCATTCG-------------------------AG--TATGACTTG-GCC-TTTGGAT-----GAAAC---TGTTTAAATTAAA-----A-TGTA--ACGCTCTGAAAATTGCAATTTTAAGCTT-----------------CGATTTGT-TATTTATTGTATT------TATTTA-TATCTA-GC-------CCCC----T---T---CG--A----TG-GGGA---TATTATGTATTAATTTTTAGT--ACTTAT-CATTA-GATGCAT-CAACATTCTGTCTGGG------------------------------AATCAGT------TTGAAG-TA-------------CATATTGCCGCCTT-----GCGGGGTGGAGTCTGAG---GGCACCTGCCC----AATCA----G
dp5 3:6638933-6639193 - TCGCTGACGAAATCCC---AAA-----TTGCTCTCAAGT--TGTT-TCGCATT-TGTTTGTTTTCGTAGTTTTAAGAGAAATTTTCG--------C-------AAAATTTAAATTTGTATTATTGGC-A--GGAT-TTAAATATCCCAAAGCAA---------AC-TCT-GGTTTTGCTCCAAATTCATCCGTT----A-AGTT--GAAATCCTTAAT--TTC----------------CTTA-TTTT-CCA-TTTGGG-TC-T-----C---TTTCTAAATTAAATGATTA-AGTG--ATGCCCTGAAAATTTTAATTTTTCGCTTA----------------CGATTTGT-TATGTACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_2:6859168-6859438 - TCGCCGACGAAACCCC---AAA-----TTGCTCTCAAGT--TGTT-TCGCATT-TGTATGTTTTCGTAGTTTTAAGAGAAATTTT------TC-AC-------AAAATTTAAATTTTTATTATTGGC-A--GGAT-GTAAATATCCCAAAGCAA---------AC-TCT-GGTTTTGCTCCAAATTCATCCGTT----A-CGTT--GAAATTA----------------------AG--GATA-TTTT-CCA-TTTGGG-TC-T-----C---TTTCTAAATTAAATGATTA-AGTG--ATGCCCTGAAAATTTTAATTTTTCGCCTA----------------CGATTTGT-TATGTACTCC----------------------------------------------------T-----A-TGTATATTTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12875:8670865-8671072 - AGACCAGCCCAGCCCA---GC-----------------CCCGCCCAT----GT-TGATCATGTATGT--------------------C---ACAAG-------AAAATTGCAATTTTCACCATAA-A----------------------------------------------------------TTATCAATCAGTTA-AA--------TTATCAACGTGTCCCCATTTTAAAGAAGTCATG-TTTT-------------TGT-----T---TGTGTCAATTAAA-----T-TGTA--ACGCTCTGAAAATTGCAATTTCG-GTTTAGAAAAATTGATGAATTGAATTTGT-TATGGACTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:18531060-18531237 + CACCTTTAACCATTC----GCG-ATCCCTGCTCCCA--C--TAG--------T-TGATGATGTATGT--------------------C---ACAAG-------AAAATTGCAATTTTTACCATAA-A----------------------------------------------------------TTATCAATCAGTTA-AA--------TTATCGAAGTGTCCCGAATTTGTAGAAGT--TG-TCTT-------------TGT-----T---TTTGTCAATTAAA-----A-TGTG--ACGCTATGAAAATTGCAATTTCAGACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACTCCAGCAAAAGTCG---GAGGAT-ACAGCTCGAA--CGCGGGCGG----CT-TGGTTATGTATGTATGCTTAAGAGGAAAAAACCC-ACAA-AC-------AAAATTGCAATTTTCACTATTA-GGATG----------------------------------------------------------GAATCC--------------------------------------------CATA-TTC-------------TC-G-----C---TGTCCAAATTCAA-----A-TTAG--ACGCTCTGAAAATTGCAATTTTACATTTA----------------CGTTTTGT-TATGTACTGTATT------TGTTTT-TAATC------------GCCTCCG--------CA--A----GGCGGGT----------CATTACTTAGTAGT--ATTTAT-T--------------------AAGCACAGGCTCGTCA-TTTTCCACAGCCCGAGTGAATGAATCACT------TCAACTTCAAA-TGGTGTTT-TCAGATTGCTACCCTATTTGGTGGGGTGCGGTCCCAA---AACAGCTGCTC----CACTG----GSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCCTATTTGGTGGGGTGCGGTC................................2412.00200000000002000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-T--------------------AAGCACAGGCTCGTCA-TTTTC....................................................................................................................2511.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACTTCAAA-TGGTGTTT-TCAAGA...........................................................2511.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGGTCCCAA---AACAGC...................1811.00100001000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTACCCTATTTGGT...........................................1811.00100001000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGT----------CATTACTTAGTAGT--ATT...................................................................................................................................................................2211.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGGCTCGTCA-TTTTCCA..................................................................................................................2011.00100001000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-T--------------------AAGCACAGGCTCGTCA-TTTTCCACA................................................................................................................2711.00100000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTAGTAGT--ATTTAT-T--------------------AAGCACAGGC................................................................................................................................2811.00100000010000000000
.....................................................................................................................................................................................................................................................................................................TTAG--ACGCTCTGAAAATTGCAATTTT..........................................................................................................................................................................................................................................................................................................2611.00100000000001000000
.....................................................................................................................CACTATTA-GGATG----------------------------------------------------------GAATCC--------------------------------------------C...........................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAT-T--------------------AAGCACAGGCTCGTCA-TTTTC....................................................................................................................2611.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-T--------------------AAGCACAGGCTCGTCA-TTTTCC...................................................................................................................2411.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-T--------------------AAGCACAGGCTCGTCA-TTTT.....................................................................................................................2211.00100000010000000000
......................................................................................................................................................................................................................................................................................................TAG--ACGCTCTGAAAG....................................................................................................................................................................................................................................................................................................................1570.14100000001000000000
droSec2
ACTCCAGCAAAAGTCG---GAGGAT-ACAGCTCGAA--CGCGGGCGG----CT-TGGTTATGTATGTATGCTTAAGAGGAAAAAACCC-ACAA-AC-------AAAATTGCAATTTTCAATATTA-GGATG----------------------------------------------------------GAATCC--------------------------------------------CATA-TTC-------------TC-G-----C---TGTCCAAATCCAA-----A-TTAG--ACGCTCTGAAAATTGCAATTTTACATTTA----------------CGTTTTGT-TATGTACTGTATT------TGTTTT-TAATC------------GCCTCCG--------CA--A----GGCGGGT----------CATTACTTAGTAGT--AATTAT-T--------------------AAGCACAGGCTCGTCA-TTTTTCACAGCCCGAGTGAATGAATCACT------TCAACTTCAAA-TTATGTTT-TCAGATTGCAACCCTATTTGGTGGGGTGCGGTCCCAA---AACAGCTGCTC----CACTT----GSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
ACTCCAGCAAAAGTCG---GAGGAT-ACAGCTCGAA--CGCGGGCGG----CT-TGTTTATGTATGTATGCTTAAGAGGAAAACACCC-ACAC-AC-------AAAATTGCAATTTTCACCATGA-G---T----------------------------------------------------------GAATCC--------------------------------------------CATA-CTC-------------TC-C-----C---GGTCCAAATCCAA-----A-TTGG--ACGCTCTGAAAATTGCAATTTTACATTTA----------------CGTTTTGT-TATGTACTGTATT------TGTTTT-TAGTC------------GCCTTCG--------CA--A----GAAGGGT----------CATTACTTAGTAGT--ATTTAT-T--------------------ATGCACAGGCTCGTCA-TTTTTAACAGCCCGAG----TGAATCACA------TCAACTTCAAA-TGGTGTTT-TCAGATTGCCACCCTAATTGGTGGGGTGCGGTCCCAA---AACAGCTGCTC----CACTG----GSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-TTTTTAACAGCCCGAG----TGA..................................................................................................21112.001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................ACGCTCTGAAAATTGCAAT.............................................................................................................................................................................................................................................................................................................1917.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................ACGCTCTGAAAATTGCAATTTAC.........................................................................................................................................................................................................................................................................................................2317.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACTTCAAA-TGGTGTTT-TCA..............................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CGCGGGCGG----CT-TGTTTAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000100100100000000000100000000000000
.........................................................................................................................................................................................................................................................................................TCCAA-----A-TTGG--ACGCTCTGAAAATTGCAA..............................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TTGG--ACGCTCTGAAAATTGCAATTT...........................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGGTGGGGTGCGGTCCCA.............................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-T--------------------ATGCACAGGCTCGTCA-TT.......................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000001000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CA--A----GAAGGGT----------CATTACTTAGT...........................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................A----GAAGGGT----------CATTACTTAGTAG.........................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................G--------CA--A----GAAGGGT----------CATTACTTAG............................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000
..TCCAGCAAAAGTCG---GAGGAT-ACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
.....................................................................................................................................................................................................................................................................................CAAATCCAA-----A-TTGG--ACGCTCT.........................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................AGTC------------GCCTTCG--------CA--A----GAAGGGT----------......................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................GTTTATGTATGTATGCTTAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACAGCCCGAG----TGAATCA..............................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAG----TGAATCACA------TCAACTTCA.............................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TTT-TAGTC------------GCCTTCG--------CA--A----GAAGGGT----------......................................................................................................................................................................................2512.0020000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................T-ACAGCTCGAA--CGCGGGCGG----........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TGAAAATTGCAATTTTACA.......................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CCC-ACAC-AC-------AAAATTGCAATTTTCACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-T--------------------ATGCACAGGCTCGTCA-TTTTT....................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTCAAA-TGGTGTTT-TCAG.............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........AAAAGTCG---GAGGAT-ACAGCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGGTGGGGTGCGGTC................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGGGTGCGGTCCCAA---AACAG....................2411.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCGAG----TGAATCACA------TCAAC.................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................ACAGCTCGAA--CGCGGGCGG----CT-TG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CGGGCGG----CT-TGTTTATGTATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..............CG---GAGGAT-ACAGCTCGAA--CGCGGGCGG----CT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................T-TGTTTATGTATGTATGCTTAAGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--ATTTAT-T--------------------ATGCACAGGCTCG.............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................AA-----A-TTGG--ACGCTCTGAAAATTGCAATTT...........................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TATGTATGTATGCTTAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................GTATGTATGCTTAAGAGGAAAACACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCTCGTCA-TTTTTAACA................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................A-TTGG--ACGCTCTGAAAATTGCAATTT...........................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAACAGCCCGAG----TGAAT................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................................................TATGTATGTATGCTTAAGAGGAAAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTCG--------CA--A----GAAGGGT----------CATTAC................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGGGTGCGGTCCCAA---AACAGC...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------ATGCACAGGCTCGTCA-TT.......................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................TAAGAGGAAAACACCC-ACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TCCAA-----A-TTGG--ACGCTCTGAAA.....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................CTC-------------TC-C-----C---GGTCCAAATCCAA-----A-......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TGCTTAAGAGGAAAACACCC-ACAC-.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGGGGTGCGGTCCCAA---AACAGC...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................GAGGAT-ACAGCTCGAA--CGCGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-T--------------------ATGCACAGGCTCGTCA-TTTT.....................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAA-TGGTGTTT-TCAGATTG.........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................A-----A-TTGG--ACGCTCTGAAAATTGCAATTT...........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................................................................................................................................................TTGG--ACGCTCTGAAAATTGCAATT............................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACTTCAAA-TGGTGTTT-TCAGA............................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TAGTC------------GCCTTCG--------CA--A----GAAGGGT----------......................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................CGG----CT-TGTTTATGTATGTATGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCCCGAG----TGAATCACA------TC....................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACAGCCCGAG----TGAATCAC.............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TCAGATTGCCACCCTAATTGGTGGGG.......................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................ACGCTCTGAAAATTGCAATTTTAC........................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TCCAGCAAAAGTCG---GAGGAT-A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TCCAA-----A-TTGG--ACGCTCTGAAAATTGCAAT.............................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCACCCTAATTGGTGGGG.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AT-ACAGCTCGAA--CGCGGGCGG----C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGGTGGGGTGCGGTCCCT.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTAACAGCCCGAG----TGAAT................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
............................................................................................................................................................................................................................................................................................................CGCTCTGAAAATTGCAAT.............................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AGGAT-ACAGCTCGAA--CGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGTGCGGTCCCAA---AACAGC...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TCCAAATCCAA-----A-TTGG--ACGCTCTGAAAA....................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTAGTAGT--ATTTAT-T--------------------ATGCACAGGCT...............................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................A-G---T----------------------------------------------------------GAATCC--------------------------------------------CATA-CTC-------------TC-C-----C---G.........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGTGCGGTCCCAA---AACAG....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGGT----------CATTACTTAGTAGT--A.....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................CAGCTCGAA--CGCGGGCGG----CT-TGTTTAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGGTGGGGTGCGGTCCCAA---A........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTT-TCAGATTGCCACCCTA.................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCTCGTCA-TTTTTAACAG...............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGCCCGAG----TGAATCACA------......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................AT-ACAGCTCGAA--CGCGGGCGG----........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TGTTTATGTATGTATGCTTAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................ATTTA----------------CGTTTTGT-TATGTACTGT................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGTCCCAA---AACAGCTGCTC----CACTG----.2711.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TACTGTATT------TGTTTT-TAGTC------------GCCTT..........................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............G---GAGGAT-ACAGCTCGAA--CGCATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TCCAAATCCAA-----A-TTGG--ACGCTCTGAAAAT...................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TATGTATGCTTAAGAGGAAAACACCC-C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................C---GGTCCAAATCCAA-----A-TTGG--ACGCT...........................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CG---GAGGAT-ACAGCTCGAA--CGCGGGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................A-TTGG--ACGCTCTGAAAATTGCAATT............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCAA---AACAGCTGCTC----CC........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................A-TTGG--ACGCTCTGAAAATTGCA...............................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................................................................................................................................................................................................................................................................................................ACGCTCTGAAAATTGCAATTTTA.........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGT--ATTTAT-T--------------------ATGCACAGGCTCGTC...........................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................ATGTATGCTTAAGAGGAAAACACCC-AC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TATGTATGTATGCTTAAGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTCG--------CA--A----GAAGGGT----------CATTACTTAGTAGT--A.....................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TGG--ACGCTCTGAAAATTGCA...............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGGGTGCGGTCCCAA---AAC......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-T--------------------ATGCACAGGCTCGTCA-T........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------TCAACTTCAAA-TGGTGTTT-.................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................ATCCAA-----A-TTGG--ACGCTCTGAAAAT...................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AGCAAAAGTCG---GAGGAT-ACAGCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................T----------CATTACTTAGTAGT--ATTTAT-T--------------------ATGCACA...................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACAGCCCGAG----TGAATCACA------TCAAC.................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
...........................................................................................................................................................................................................................................................................................CAA-----A-TTGG--ACGCTCTGAAAATTGCAAT.............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AT-ACAGCTCGAA--CGCGGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................AA-----A-TTGG--ACGCTCTGAAAATTGC................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................GTATGCTTAAGAGGAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TTGG--ACGCTCTGAAAATTGCAATTTTACA.......................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CAGCTCGAA--CGCGGGCGG----CT-TG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCGTCA-TTTTTAACAGCC.............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTCG--------CA--A----GAAGGGT----------CATTACTTAGTAG.........................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................T------TGTTTT-TAGTC------------GCCTTCG--------CA--............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-T--------------------ATGCACAGGCTCGTCA-TTTTA....................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
droEre2
ACTCCAGCAAAAGTCG---GAGGAT-GCAGCTCGAA--C--GGGCAG----CT-TGTTTATGTATGTATGCTTAAGAGCCAAACACCC-ACAC-ACA------AAAATTGCAATTTTCACCTTTA-G---G----------------------------------------------------------GAATCT--------------------------------------------CAT--------------------------------------ATTCAA-----A-TTAG--ACGCCCTGAAAATTGCAATTTTACATTTA----------------CGTTTTGT-TATGTACTGTATT------TGTTTG-TAATT------------CCCTCCG--------CA--A----GG-GGGG----------CATTACTTAGTAGT--ATTTAT-TGTTA-GATTGAA-CAATATTCTGCACAGACTCGTCA-TTTTTAACACACCGAG----TGAATCACT------TCAACT-CGAA-TGGTGTTT-TCTGATTGCCGCCCTAT---GTGGGGTGGGGTCCCAA---AACAGCTGCTC----CATTG----GSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------TCAACT-CGAA-TGGTGTTT-TCTGATT..........................................................2616.0060000006
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATATTCTGCACAGACTCGTCA-TT.......................................................................................................................2514.0040000004
...CCAGCAAAAGTCG---GAGGAT-GCAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
........AAAAGTCG---GAGGAT-GCAGCTCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGTCCCAA---AACAGCTGCTC----CA........2411.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGTTT-TCTGATTGCCGCCCTAT---G............................................2611.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAA-CAATATTCTGCACAGACTCGTC...........................................................................................................................2811.0010000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGTTT-TCTGATTGCCGCCCTA.................................................2411.0011000000
.................................................................................................................................................................................................................................................................................................................TGAAAATTGCAATTTTACATTTA----------------CGTT...............................................................................................................................................................................................................................................................................2711.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-CAATATTCTGCACAGACTC..............................................................................................................................2111.0010001000
...........................................................................................................................................................................................................................................................................................................................................................TTTGT-TATGTACTGTATT------TGTTTG-TAAT............................................................................................................................................................................................................................................2811.0011000000
...............................TCGAA--C--GGGCAG----CT-TGTTTATGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACT-CGAA-TGGTGTTT-TCTGATTGCCG......................................................2811.0011000000
..................................................................TATGCTTAAGAGCCAAACACCC-ACAC-ACA------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTAGTAGT--ATTTAT-TGTTA-GATTGA...................................................................................................................................................2811.0011000000
..TCCAGCAAAAGTCG---GAGGAT-GCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTGCACAGACTCGTC...........................................................................................................................2011.0010010000
droYak3
ACTCCAGCGAAAGTCG---GAGGAT-ACAGCTCGAA--C--GGGCGG----CT-TGTTTATGTATGTATGCTTAAGAGGAAAACACCC-ACAC-ACAA-----AAAATTGCAATTTTTATCTTTA-G---G----------------------------------------------------------GAATCG--------------------------------------------CATA-TT---------------C-G-----C---TGTCTAAATCCAA-----A-TTGG--ATGGCCTGAAAATTGCAATTTGACATTTA----------------CGTTTTGT-TATGTACTGTATT------TGTTTG-TAATC------------CCTTCCG--------CA--ATTGGGAGGGGC----------CATTACTTAGTAGT--ATTTAT-TGTTA-GATTGAA-CAACATTCTGCACAGGCTCGTCA-TTTTTCACAGACCGAG----TGAATCACT------TCAACT-CAAATTGTTGATT-TCAGATTGCCGCCCTT---AATGGGGTGGGGTTCCAA---AACAGCTGCTC----CATTG----GSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....AGCGAAAGTCG---GAGGAT-ACAGCTCGAA--C--G.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACT------TCAACT-CAAATTGTT......................................................................1911.00101000000000
.....................................................................................................................................................................................................................................................................................................TTGG--ATGGCCTGAAAATTGC................................................................................................................................................................................................................................................................................................................2011.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................C----------CATTACTTAGTAGT--ATTTAT-TGTT...........................................................................................................................................................2511.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTGCACAGGCTCGTCA-T........................................................................................................................2111.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATT-TCAGATTGCCGCCCTT---AATGG.........................................2611.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CG--------CA--ATTGGGAGGGGC----------CAT...................................................................................................................................................................................1911.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGACCGAG----TGAATCACT------TCAACT-...............................................................................2611.00101000000000
droEug1
TCTCTAGCAAAAGCCG---GAGGAT-ACTGCTCGAG--CCCGTGACG----TT-TATGTATGTATGTTTGTTTAGGAGGAAACCACCCAAAAC-TC-------AAAATTGCAATTTTCACCTTTTAG-A--AGATTCTATTTCGTGGG------AATCAACATT-TT--------------------------T---------------G-------------------------AGCTCAT--TTTT-GCA-TTTG-TT-----ACAGC---AGTCTGAACTAAA-----A-TGAG--ACGCTATGAAAATTGCAATTTAATATTTA----------------CGTTTTGT-TATGTACTGTATT------TGTTTA-TAATTA-AC-------CCCT----T---ATCCC---A-----A-GGGG----------AATTATTTCGTAGT--ATTTAT-TGTTC-GATTCAACCAACATTCTGCCCAGGCTCGTAA-CTTTTTATATCCCCAGAA--TGAATCACT------TCGAAG-TAAT-TGGTGTTTTTTAGATTGTCGCCCTAT--ATTTGGGTGGGGTCTGAA---AACAGCTGCTC----TATCG----GSizeHit CountTotal NormTotal
No Reads
droBia1
ACTCCAGCAGAAGCCG---GAGGATTACTGCTCCAA--G-AGGGCAG----TG-GGTTTATGTATGTATGCTTAAGAGGAAACCACCC-ACAT-AC-------AAAATTGCAATTTTCACCTTTT-GGAGAGGATTCTATTTAGTAGC------CATCGAAAT------------------------------T---------------G-------------------------ATCTGATG-TTTTGGCCTTTTGGG-GC-ACACAGC---TGTCTAAATTAAA-----A-TGAG--ACGCTCTGAAAATTGCAATTTTGCATTTA----------------CGTTTTGT-TATGTACTGTATTTGTATCTGTTTG-TAACTAAGC--------CCT----T---G-C-CATCA-----A-GGGG----------TATTATTTCGTAGT--ATTTAT-TGTTA-GATTCAA-CAACATTCTGCCCAGGCTC---------------------------------------------------------------------------------------------TCGAA---ACCAGCTGCTC----CATCG----GSizeHit CountTotal NormTotal
No Reads
droTak1
CT---GGCCAAGGCCGGCGGAGGATCACTGCTCCAA--AATGGGCAG----TG-TGTTTATGTATGTATGCTTAAGAGGAAACCACCC-ACAT-AC-------AAAATTGCAATTTTCACCCCTTAG-A--GGATTCTATTTATTA-----------------------------------------------------------------------------------------------------C-GCC-TTCA-AT-----GCAGC---TGTCTAAATCGAA-----A-TGAG--ACGCTCTGAAAATTGCAATTTTGCATTTA----------------CGTTTTGT-TATGTACTGTATT------TGTTTG-TAATTAAGC-------CCCC----T---TC---ACCA-----A-GGGT----------TATTATTTCGTAGT--ATTTAT-TGTTA-GATTCAA-CAACATTCTACCCAGGCTCGCC------------------------------------------------------------------------------------------CTCAA---AACAGCTGCTC----TTTCG----GSizeHit CountTotal NormTotal
No Reads
droEle1
CTGCCAGCAAAAGCCG---GAGGAT-AGCGCGCAAA--C--GGGCGG----CA-TGTTTATGTATGTATGCTTAAGAGAAAATCACCC-ACAC-AT-------AAAATTGCAATTTTCACCTTTTAG-A--GGAATGTATTTATTAGC------AA-CAAAATGGCT--------------------------T---------------A-------------------------AGCTAATA-TTTT-GTGTCTTG-GT-----ACAGT---CGTTTAATTTTAA-----A-TGTA--ACGCTCCGAAAATTGCAATTTTACATTTA----------------GGTTTTGT-TATGTACTGTATT------TGTTTG-TAATTA-GC----TCCCCCT--------TTCCCA--A----AA-GGGG----------TATTATTTCGTAGTTTATTTAT-TGTTA-GATGCAA-CAACATTCTGCCCAGGCTCGCAACTTTTTCATAGCCCGAGTG--TGAATCACT------TCGGAG-TAAT-TAATGTTT-TGAGATTATCACCTTAT---GTAGGGTGGGGTCTCAA-AAAACAGCTGCTC----TA--------SizeHit CountTotal NormTotal
No Reads
droRho1
CTTCCAGCAAAAGCCG---GAGGAT-ACCGCTCGAA--C--GGGCGG----CG-TGTTTATGTATGTATGCTTAAGAGGAAACCACCC-ACAC-AT-------AAAATTGCAATTTTCACCTTTTAG-A--GGAATCTATTTATCAGC------AACCAAAATT-AT--------------------------T---------------G-------------------------AGCTAATA-TTTT-GCGTTTTG-GT-----ACAGT---TGTTAAAATTAAA-----A-TGTG--ACGCTCTGAAAATTGCAATTTTACATTTA----------------CGTTTTGT-TATGTACTGTATT------TGTTTG-TATTTA-GC-------CCCC----T---TCC-CA--A-----A-GGGG----------TATTATTTTGTAGT--ATTTAT-TGTTA-GATGCAA-CAACATTCTGCCCAGGCTCGCAACTTTTTCATAACCCGAGCG--TGAATCACT------TCGGAG-TAAA-TGGTGTTT-CGAGATTGTCACCCCA-----TGGGGTGGGGTCTTAA---AACAGCTGCTC----TATCG----GSizeHit CountTotal NormTotal
No Reads
droFic1
TCTCCAGCGATAACCG---GACGAT-ACCGCTCATA--G--GGGCCC----CG-TGTTTATGTATGTATGCTTAAGAGGAAACCACCC-ACAC-ACA------AAAATTGCAATTTTCATTA----G-A--GGAATCTATTTATTGGC------AAACCAAAT------------------------------T---------------G-------------------------AACTTTTC-TTTT-GCT-TTTG-GT-G-GCAAAGT---AGTTCAAATTTCA-----A-TGTG--AAGCTCTGAAAATTGCAATTTTACACTTA----------------CGTTTTGT-TATGTAATGTATT------TGTTTA-TAATAA-GC-----------TCTGT---TT--CT--A-----A-GGGG----------TATTTCTTCGTTGT--ATTTAT-TGTTA-GAAGCGA-CAACATTCTGCCCAGGCTCGAAACTTTTTCATAACCCCAGAG--TGAATCACT------TCTGAG-TAAG-TGGTGTTA-TGATATGCCCGCCCTA-----TGGGGAGGGGTCTAAA---AACAGCTGCAC----TATCG----GSizeHit CountTotal NormTotal
No Reads
droKik1
GCTCGTGGG--AGTGG---AGTGAAATCTGCTCCAG--C--GAGCCCTGTGTTTTGTGTATG--TATATGTTTAAGAGGAAACCCCCA-AAAA-ACAAAAACAAAAATTGCAATTTTCAAAG---------GGTATTTATTTTAGACC------AA-AAAAAGA-GTAGA-------------------GAATCA-------------------------------------------------ATTT-GC--TTTG-CT-----GCAGATGTT-TTTTAATTCAA-----A-TGTGACACGGTCTGGAAATTGCAATTTAAG-CTTAATTTTCTTGTTGTA-------TGTATATGTAAT-----TGTATTTGTTTA-TAACTG-GTAGCATGCCCCG----TGCATC-CC---C-----A-GGGGTATTATTACGTATTATTTCATAGT--ATTTATTTGTTAAGAGGCA----------------------------------------------TAAATCACACACTTTGCGGAA-TAAG-TAAGGTCT------------------------------T--CTCGGTAGAACAGCTGCCC----C---------SizeHit CountTotal NormTotal
No Reads
droAna3
CTCCCAGCGAAGGCCG---TAAGGA--------------------AC----CG-TGTTAATGTATGTATGTTTAGGAGGAAACAAGAA-AGAT-TCAA-----AAAATTGCAATTTTCACCCAA--G-A--GAAAAAAAAAA---------------------AC-AAGAAATTTGTCGTCAAAATTATTCTTT----G-TTTT--TT---------------------------AAATAATTATTTG-CCC-TTTGGAT---GAAAAAT---TGTTAAAATTAAA-----AATGTA--ACGCTCTGAAAATTGCAATTTTAAGCTT-----------------CGATTTGT-TATTTATTGTATT------TATTTTTTAACTA-GC-------CCTC----T---T---CG--A----TG-GGGA---TATTATGTATTAATTTTTAGT--ATTTAT-CATTA-GATGCAT-CAACATTCTGTCTGGGTTCGCACCTTCTT--------------------------------------------------------------------TCAGAGATCTGGGGTCTCAG---GGCAACTGCCCGCCCAATCGTCGTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGGGGTCTCAG---GGCAACTGCCCGCC...........2911.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-CAACATTCTGTCTGGGT................................................................................................................................1911.001000001
........................................................................TAGGAGGAAACAAGAA-AGAT-T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------------------------------------------------TCAGAGATCTGGGGTCTCAG---GGC......................2411.001000001
droBip1
-CTCCAGCGAAGGCCG---CAA-----TCGCAA---------GGAAC----CG-TGTTAATGTATGTATGTCTAGGAGGAAACAACAA-AGAT-TCAA-----AAAATTGCAATTTTCACCCAA--G-A--GA------------------------------AC-AAG-AATTTGTCGACAAAATTATT---T----GGTCTTCATTCG-------------------------AG--TATGACTTG-GCC-TTTGGAT-----GAAAC---TGTTTAAATTAAA-----A-TGTA--ACGCTCTGAAAATTGCAATTTTAAGCTT-----------------CGATTTGT-TATTTATTGTATT------TATTTA-TATCTA-GC-------CCCC----T---T---CG--A----TG-GGGA---TATTATGTATTAATTTTTAGT--ACTTAT-CATTA-GATGCAT-CAACATTCTGTCTGGG------------------------------AATCAGT------TTGAAG-TA-------------CATATTGCCGCCTT-----GCGGGGTGGAGTCTGAG---GGCACCTGCCC----AATCA----GSizeHit CountTotal NormTotal
No Reads
dp5
TCGCTGACGAAATCCC---AAA-----TTGCTCTCAAGT--TGTT-TCGCATT-TGTTTGTTTTCGTAGTTTTAAGAGAAATTTTCG--------C-------AAAATTTAAATTTGTATTATTGGC-A--GGAT-TTAAATATCCCAAAGCAA---------AC-TCT-GGTTTTGCTCCAAATTCATCCGTT----A-AGTT--GAAATCCTTAAT--TTC----------------CTTA-TTTT-CCA-TTTGGG-TC-T-----C---TTTCTAAATTAAATGATTA-AGTG--ATGCCCTGAAAATTTTAATTTTTCGCTTA----------------CGATTTGT-TATGTACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................ATGATTA-AGTG--ATGCCCTG........................................................................................................................................................................................................................................................................................................................1911.0010100000000
..............................................................................................................................................ATCCCAAAGCAA---------AC-TCT-GGTTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
........................................................................................................................................................AA---------AC-TCT-GGTTTTGCTCCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............................................................................................................................................................................TTTGCTCCAAATTCATCCGTT----A-AGTT--.............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
droPer2
TCGCCGACGAAACCCC---AAA-----TTGCTCTCAAGT--TGTT-TCGCATT-TGTATGTTTTCGTAGTTTTAAGAGAAATTTT------TC-AC-------AAAATTTAAATTTTTATTATTGGC-A--GGAT-GTAAATATCCCAAAGCAA---------AC-TCT-GGTTTTGCTCCAAATTCATCCGTT----A-CGTT--GAAATTA----------------------AG--GATA-TTTT-CCA-TTTGGG-TC-T-----C---TTTCTAAATTAAATGATTA-AGTG--ATGCCCTGAAAATTTTAATTTTTCGCCTA----------------CGATTTGT-TATGTACTCC----------------------------------------------------T-----A-TGTATATTTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................CGCCTA----------------CGATTTGT-TATGTACT..................................................................................................................................................................................................................................................................2212.002200000
...............................................................................................................................................................................................................................................................................................................................TTTCGCCTA----------------CGATTTGT-TATGT.....................................................................................................................................................................................................................................................................2211.001010000
.............................................................................................................................................................................TTTGCTCCAAATTCATCCGTT----A-CGTT--.............................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
....................................................................................................................................................................................................................................................................................................................................CCTA----------------CGATTTGT-TATGTACTC.................................................................................................................................................................................................................................................................2111.001001000
........................................................................................................................................................AA---------AC-TCT-GGTTTTGCTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
droVir3
AGACCAGCCCAGCCCA---GC-----------------CCCGCCCAT----GT-TGATCATGTATGT--------------------C---ACAAG-------AAAATTGCAATTTTCACCATAA-A----------------------------------------------------------TTATCAATCAGTTA-AA--------TTATCAACGTGTCCCCATTTTAAAGAAGTCATG-TTTT-------------TGT-----T---TGTGTCAATTAAA-----T-TGTA--ACGCTCTGAAAATTGCAATTTCG-GTTTAGAAAAATTGATGAATTGAATTTGT-TATGGACTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................CAGTTA-AA--------TTATCAACGTGTCCCCA........................................................................................................................................................................................................................................................................................................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000002
........................................................................................................................................................................................................AA--------TTATCAACGTGTCCCCA........................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.................................................................GT--------------------C---ACAAG-------AAAATTGCAATTTTCACCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.........CAGCCCA---GC-----------------CCCGCCCAT----GT-TGATCAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TGATGAATTGAATTTGT-TAT.......................................................................................................................................................................................................................................................................2011.001000000000000000000010000000000000000000000000000000000000000000
...................................................GT-TGATCATGTATGT--------------------C---ACAAG-------A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
...........................................................ATGTATGT--------------------C---ACAAG-------AAAATTGCAATTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000100000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TTGCAATTTCG-GTTTAGAAAA..............................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................A-----T-TGTA--ACGCTCTGAAAATTGCAA..............................................................................................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................TTTT-------------TGT-----T---TGTGTCAATTAAA-----........................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
droMoj3
CACCTTTAACCATTC----GCG-ATCCCTGCTCCCA--C--TAG--------T-TGATGATGTATGT--------------------C---ACAAG-------AAAATTGCAATTTTTACCATAA-A----------------------------------------------------------TTATCAATCAGTTA-AA--------TTATCGAAGTGTCCCGAATTTGTAGAAGT--TG-TCTT-------------TGT-----T---TTTGTCAATTAAA-----A-TGTG--ACGCTATGAAAATTGCAATTTCAGACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................GTATGT--------------------C---ACAAG-------AAAATTGCAATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.........................................................................................................................................................................................................A--------TTATCGAAGTGTCCCGAA.......................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.................................................................................................................................................................................................................................GAATTTGTAGAAGT--TG-TCTT-------------......................................................................................................................................................................................................................................................................................................................................................................2011.001100000

Generated: 05/19/2015 at 05:16 AM