ID:

dsi_23369

 Coordinate:

3r:15128755-15128904 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.5 -12.4 -12.4 -11.8

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AGAGACAGAAATACATTTCGTACAAAATTCCGCCCTGCATTTAGTATATTTCACCTTAGAGCGTCTTTGCCACACACACACTTGTAACCACTCACACACTGACAAGCGCGAACAAGACACACACGTGGCCATCAAAGCGGTATCGGTTCGCGTCGCGTTTGGCCTAAAATTGTAACAGTTTTCCTTTTACAACAACGAAGAATACCAGAAGAAGCAAAGCCAAAAACGCAGCTGCAGTCGACGTCGACGC
*******************************************************************************....((............(((((....(((........(((....))).........)))...)))))..))*************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 O002
Head
 SRR902009
testis
 SRR618934
dsim w501 ovaries
...............................................................................ACTTGTAACCACTCACACACT...................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CAGCTGCAGTCGACGTCGACG. 21 0 2 1.00 2 2 0 0 0 0 0 0 0
...............................................................................................ACACTGACAAGCGCGAACAAGACACA................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 1 0
........................................................................................................................................................................................................................AATCCAAAAACGCAGCTGCAGTCGACG....... 27 1 1 1.00 1 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................AAAAACGCAGCTGCAGTCGACGTCGACG. 28 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................................CACATTAGAGCGTCTTTGCCACACACACA.......................................................................................................................................................................... 29 1 1 1.00 1 0 0 0 1 0 0 0 0
.............CATTTCGTACAAAATTCCGCC........................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................GCCATCAAAGCGGTATCGGTTCGC................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................CATCAAAGCGGCATCGGTTCGC................................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0
.......................................................................................CCACTCACACACTGACAAG................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 1 0 0
.......................................................................................................................................................GTCGCGTTTGGCCTAAAATTGTAAC.......................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................CGAAGAATACCAGACGATGCA.................................. 21 2 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................TATCAGAAGAAGCAAAGCCCGAA......................... 23 3 1 1.00 1 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................CGAAGAATACCAGACGATGCT.................................. 21 3 2 0.50 1 0 1 0 0 0 0 0 0
.................................................................................................................................................GTTCGAGTCGCGGTCGGCC...................................................................................... 19 3 14 0.36 5 0 0 0 0 5 0 0 0
.....................................................CCTTAGAGCGTCCTTG..................................................................................................................................................................................... 16 1 4 0.25 1 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................CGAAGAATACCAGACGATGCC.................................. 21 3 4 0.25 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................GAAGAATACCAGACGATGCT.................................. 20 3 9 0.22 2 0 2 0 0 0 0 0 0
..................................................................................................................................................................................................TCGAAGAATACCAGACGATGC................................... 21 3 7 0.14 1 0 1 0 0 0 0 0 0
...............................................................................................ACAATGACAAGCGCG............................................................................................................................................ 15 1 17 0.06 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

TCTCTGTCTTTATGTAAAGCATGTTTTAAGGCGGGACGTAAATCATATAAAGTGGAATCTCGCAGAAACGGTGTGTGTGTGAACATTGGTGAGTGTGTGACTGTTCGCGCTTGTTCTGTGTGTGCACCGGTAGTTTCGCCATAGCCAAGCGCAGCGCAAACCGGATTTTAACATTGTCAAAAGGAAAATGTTGTTGCTTCTTATGGTCTTCTTCGTTTCGGTTTTTGCGTCGACGTCAGCTGCAGCTGCG
***************************************************************************************************....((............(((((....(((........(((....))).........)))...)))))..))******************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
............................................................................................................................................................................................TGTGGGAGCTTCTTATGGTCT......................................... 21 3 3 1.33 4 4 0 0 0 0 0
..............................................................................................................................................................................................TTGTTGCTTCTTATCGTCTTC....................................... 21 1 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................................................................................GCTTCTTATGGTCTGCTACGA.................................. 21 3 2 0.50 1 0 0 1 0 0 0
...................................................................................................................................................................................................ACTTCTTATGGTCTGCTACG................................... 20 3 4 0.25 1 1 0 0 0 0 0
.............................................................................................................................................................................................GTGGGAGCTTCTTATGGTCT......................................... 20 3 5 0.20 1 1 0 0 0 0 0
.............................................................................................................................................................................TTGTGGAAAGGAAAATGTT.......................................................... 19 2 6 0.17 1 0 0 0 1 0 0
..................................................................................................................................................................................................AGCTTCTTATGGTCTGCTACG................................... 21 3 7 0.14 1 1 0 0 0 0 0
....................AGGTTTTAAGGGGGGACG.................................................................................................................................................................................................................... 18 2 8 0.13 1 0 0 1 0 0 0
................................................AAATTGGAAACTAGCAGAAA...................................................................................................................................................................................... 20 3 14 0.07 1 0 0 0 0 1 0
.....................................................................................TTGGTTAGTGTGTGA...................................................................................................................................................... 15 1 16 0.06 1 0 0 0 0 0 1
...................................................................................................................................................................................AAAGGAAAAGGTTGTTGT..................................................... 18 2 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................................TGGGAGCTTCTTATGGTCT......................................... 19 3 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:15128705-15128954 - dsi_23369 AGAG---------------------------ACAGAAATACATTTCGTACAA---------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCACAC----------------A--CACACT--T-GTAACCACTC-------------------------------------------------------------------------------------------------------------ACA--------CACTGACA-----A----GCGCGAACAAGACACA--CA--------------------------------------------CGTGGCCATCAAAGCG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTCC-TT-T--TACAA-C---AAC-G-AAGA-----------------------ATACCAGA------------------------------AGAAGCAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTCGACGTCGA------------CGC-
droSec2 scaffold_0:15993684-15993935 - AGAG---------------------------ACAGAAATACATTTCGTACAA---------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCGCAC----------------A--CACACACTT-GTAACCACTC-------------------------------------------------------------------------------------------------------------ACA--------CACTGACA-----A----GCGCGAACAAGACACA--CA--------------------------------------------CGTGGCCATCAAAGCG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTCC-TT-T--TACAA-C---AAC-G-AAGA-----------------------ATACCAGA------------------------------AGAAGCAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTCGACGTCGA------------CGC-
dm3 chr3R:5919606-5919855 + AGAG---------------------------ACAGAAATACATTTCGTACAA---------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCACAC----------------A--CACACT--T-GTTACCACTC-------------------------------------------------------------------------------------------------------------ACA--------CACTGGCA-----A----GCGAGAACAAGACACA--CA--------------------------------------------CGTGGCCATCAAAGCG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTCC-TT-T--TACAA-C---AAC-G-AAGA-----------------------ATACCAGA------------------------------AGAAGCAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTTGACGTCGA------------CGC-
droEre2 scaffold_4770:15680406-15680665 - AGAG---------------------------ACAGAAATACATTTCGTACAA---------AATTGC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCACAC----------------A--CTCACAC---------A----------CACTTACAGCC-------------------------------------------------------------------------GCACACAC----------ACA--------CACTGGCA-----A----GCGAGAACAAGACACA--CA--------------------------------------------CGTGGCCATCAAAGCG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTCC-TT-T--TACAA-C---AAC-G-AAGA-----------------------ATACCAGA------------------------------AGTAGCAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTCGACGTCGA------------CGC-
droYak3 3R:9967223-9967395 + ---------------------------------------------------------------------------------------------------------------------------------TTG---------------------------------CCACAC----------------A--CACGCAC----------------------------------------------------------------------------------------------------------------------------A--------CACTGGCA-----A----GCGAGAACAAGACACA--CA--------------------------------------------CGTGGCCATCAAAGCG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTCC-TT-T--TACAA-C---AAC-G-AAGA-----------------------ATACCAGA------------------------------AGAAGCAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTCGACGTCGA------------CGCT
droEug1 scf7180000409470:252850-253127 + AGAG---------------------------ACAGAAATACATTTCGTACAA--A------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCACACAACC------AAACACTCACACACA-----------------------------------CGCACAT-------------------------------------------------------------ACACACACAC----------ACA--------AAGTAGCAAAA----CTAGC----GACAGACACA--CA--------------------------------------------CGTGGCCATCAAAACG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTCCTTT-T--TACAA-C---AAC-G-AAC------------------------ATA---------A--------CG--------AACAAGAAGAAGTAAAGCCAA---------------------------------------------AAGA-A---A-------------------------------C---------------------GCAGCTGCAGTCGACGTCGC------------TGC-
droBia1 scf7180000302402:3416196-3416427 + AGAG---------------------------ACAGAAATACACTTTGTACGACAG------AATTCC-------------------G-----CCCTGC-ACTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCACAC----------------A--CACACAC---------A----------CA------CAC-------------------------------------------------------------------------------------------ACA--------C---------ACGAGCCAGC----GACTGACACA--CA--------------------------------------------CGTGGCCATCAAAACG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTCC--TT---TGCAA-C---AACTG--------------------------------------------------------------------AAGAAAGGCCGA---------------------------------------------A--A-A---A-------------------------------C---------------------GCAGCTGCGGCTGGCGTCGC------------CGC-
droTak1 scf7180000415245:186379-186636 - AGAG---------------------------ACAGAAATACATTTTGTACAA-AA------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCACAC----------------A--CACACA--TAG----------C------------ACACAC-----------------------------------------------------------------------ACACACAC----------ACA--------CACTGGCG-CA--------CGAGCGACAGACACA--CA--------------------------------------------CGTGGCCATCAAAACG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTCC-TT-T--TACAA-C---AAC-G-GCGA-----------------------AAGGCAGA----A-------------------------CGAAGAAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTCGCCGTCGA------------C---
droEle1 scf7180000490967:810934-811171 - AGAG---------------------------ACAGAAATACATTTAATACAA---------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCGCAC----------------A--CACACAC---------A----------CA------C---------------------------------------------------------------------------------------------ACA--------CACATCCG-TA--------CGAGAGACAGACACA--CA--------------------------------------------CGTGGCCATCAAAACG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTTC--TTT---ACAAACGGCAAC-G-GCGA-------------------------------------------------------AGG---CAAAGAAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTCGACGTCG-----------------
droRho1 scf7180000779228:18851-19077 + AGAG---------------------------ACAGAAATACATTTCGTACAA---------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCACAC----------------A--CACACA---------------------------------------------------------------------------------------------------------------------------------------------------------CGAGAGACAGACACA--CA--------------------------------------------CGTGGCCATCAAAACG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTC---T-T--TACAA-CGGCAAC-G----G-----------------------CA----------ACAAAGGCA----------AAGG---CAAAGAAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTCGACGTCG-----------------
droFic1 scf7180000454104:908572-908799 - AGAG---------------------------ACAGAAATACATTTTGCACAA---------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCACAC----------------A--CACACAA---------A----------CGC----ACAC-------------------------------------------------------------------------------------------ACA--------CACCAGCA-----A----CGGAGAGACAGACACA--CA--------------------------------------------CGTGGCCATCAAAACG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTCC--TTT---ACGA-C-------G-A-----------------------------------------------------------------AAAGAAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTCGACGTCG-----------------
droKik1 scf7180000302706:2172225-2172596 + AGAG---------------------------ACAGAAATAAATTTCGTACAA-AA------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCACAAA-CC------------A--CACACA--T-G----CACTCGG-------------------------CAACAAAATACACTTAAAAAAAAGAAGAAAAATCAAAGGAAATAGAAAAAAAAGACAAACACAC--------ACTC------ACA--------C--------------------------------------------------------------------TCATTCAAGTCCGCGTGGCCCTCAAAACGGAACTAAAAAACTATATGTAG-CAACAACAACA-------------------------------------------------ATCGGTGTCGGTT----------CGCGTCGCGT--------------------T--------------------------------TTGGCCTAAAATTGTAACAGTTTTCT--TT---AACGA-A---AA-----AG--------------------------------------------------------------------AACGCCAAACGCCACAAAAGACGAAAGAAAGAAAAAAAAAAAACGGAAACGCAAAGC-A---A-------------------------------C---------------------GCAACTGCAGTC--CGGCGC------------TGC-
droAna3 scaffold_13340:6482474-6482882 + T--T---------------------------ACAGAAATAAATTTCGTACAA---------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGATCGTCTTTG---------------------------------CCACCTAAAC------------A--CACACT--TTG----------C------------ACACAC---------------------------------------------------------------------------------TAACACACACA--------TACACACA-CA--------CGAGTG-------CTCACTGACA--AGT-ACACTGCGCTGCAAGTTTCTTTCATTCACGTCCGCGTGGCCATCAAAATAAA---------------------AACAACAACAACAACT------ACTACTACAATGTAACAACTACGA----TTG-------TCGGTGTCGGTT----------CGCGTCGCCTCCCATCGCATCGCATCGCGTCGTTTCGTTTCGCGTTTTGGCCA-AA-AAGAAATTGGCCTAAAAATGTAACAGTTTTCT--TT---TACAA-T---AACCG-AAGC---------------------------CA-----------------------------AGAAGAA--AACGCCAA------------------------------------------------A-A---A-------------------------------CA-AACTGCAGTCTGCTGCGTCGCTACTGCAGTCGTCGACGA------------CGT-
droBip1 scf7180000396708:2366287-2366657 - -GTT---------------------------ACAGAAATAAATTTCGTACAA---------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGATCGTCTTTG---------------------------------CCACCCA---------------A--CACACAC---------A----------CA----------CTGGCACAT------------------------------------------------------------------------------------------------------ACGG---------------GCGCGCACTTATA---GT-ACACTGCGCTGCAAGTTTCTTTCATTCACGTCCGCGTGGCCATCAAAAA--------------------AG-CAACAACAACAACAACAATAACAACAAATACAATGTAACAACTACGA----TTG-------TCGGTGTCGGTT----------CGCGACGCGT---------------CGCCTTGCTTCGTTTCGCGTTTTGGCCA--A-AAGAAATTGGCCTAAAAATGTAACAGTTTTCT--TT---TACAA-AA--AAC-CAAAGC---------------------------CATA----A--------CG--------AAGAAGAAGAA--AACGCCAA------------------------------------------------A-A---A-------------------------------CA-AACTGCAG---------TCG--GCT-------GCGTCGC------------TGC-
dp5 2:5026955-5027258 - AGAG-----A--------------AGACCGTACAGAAATA---------------------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTGGTCGG----------------------------CCACAC----------------A--CACACAC---AAACCCCCTCGC------------ACAC-------------------------------------------------------------------------------------------ACA--------C------A-----------------ACAAACACA--CA-----------CA-CGCGCTGCAAGTTTCTTTCATTCACGTCCGCGTGGCCATCAAAACGGA---------------------A----------------------------------------------------------AGCATTGTCGGTT----------CGCGTCGCGC--------------------TGCAACGT--------TCGGCTA-AA-AGAAAATCGGCCTAAAATTGTAACAGTTTTCC--TTT---GCAA-C-------G-----------------------------------------------------------------------AAACGCCAA------------------------------------------------A-A---A-------------------------------CA-CGCTGCAG---------TCGCTGCTGCAGTCGACGCTGG---CGTCGTCGCCGT-
droPer2 scaffold_19:732417-732710 - AGCGGAGAAA-----A---GACGTA------ACAGAAATA---------------------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCTGTATGAGCGTCTTTGGTCGG----------------------------CCACAC----------------A--CACACAC---------A----------CA------CACAC-----------------------------------------------------------------------ACAC------------------------------------------------------ACACA--CA----------------AACTGCAAGTTTCTTTCATTCACGTCCGCGTGGCCATCAAAACGGA---------------------A----------------------------------------------------------AGCATTGTCGGTT----------CGCGTCGCGC--------------------TGCAACGT--------TCGGCTA-AA-AGAAAATCGGCCTAAAATTGTAACAGTTTTCC--TTT---GCAA-C-------G-----------------------------------------------------------------------AAACGCCAA------------------------------------------------A-A---A-------------------------------CA-CGCTGCAG---------TCGCTGCTGCAGTCGACGCTGG---CGTCGTCGCCGT-
droWil2 scf2_1100000004902:11175969-11176385 - CG-T---------------------------ACAGAAATAAATACTTTAAAA---------TATTTC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TTGGGTGTCTTTG---------------------------------CCACAA----------------A--CACACAT---------A----------CACACACAAAC------GGACAACAA------------------------------------------------------ACAC--------ACT--------CA--------CACTCA------------------------------CATGTA---GTCAAAGCGCGCTGCAAGTT----TCATTCACGCCCGCGTGGCCATCAAAT---------------------AG-CAACAGCAACAACAACG-------------------------TACGATATTTTTTTGTTGGTCGGTATCGGTT----------CGCGTAGCAT------------------------------------TCGGCTAAAAAAGAAATTTGGCCCAAAATTGTAACAGTTTTTCCTT-T--TACAA-C---AAC-A-AAGAGAAATAAAAACTATAACAACAACATAACAAAAGGAAAATAAAAA-GA-------AATG---AAAAGAAAAACTTA---------------------------------------------A--A-AACTG---------------CA----CAGTTGCAGTCA-TGCTGCTG---------CCTCTGCTGCAGTTGACGTCGA---CTTCG--GTTGC-
droVir3 scaffold_12855:2693741-2694186 - AGAG-----AGC---------CGAGGCTCGTACAGAAATA---------------------AATGCCACAG----TGCAGCGCACGG-----CCCAGC-GTTTAGTATATTTCACCT--TTGCGCGTCTTTGG-G-GCTGCCAGCGCGCCAACTCACTCCACTCGCCGCAC----------------A--CACACAC---------A----------CA------CACACGCGCGCAT-----------------------------------------------------------------------------------A--------C------------------------ATAGGCACA--CGTGTATTTGT-ACATT-TGCTGCAAGTT----TCATTCACG-CCGCGTGGCCATCGAAATT-------------------------------------------------------------------------TTGTCGTTG----CAGTCGGTTGGGGTCGGGTCACGTGGCGT--------------------T---CCGTTCC--GTT------CCCA-AGGAAATTGGCCTAAAATGGTAACAGTTTTCT--TTTATTACAA-C---AG--G-AAC---AACACAAACAAGGACA--AACATAACAGCAGCAACAACAACA-ACAACAACGAGAA---CAACGAGAA---------------------------------------------------------CAACAGCAATTACCATTGCATTCGCAGTCGCTGTCGCTGTCGCAG---------TCGCAGCTGCAGTTGACGTCGA------------CAG-
droMoj3 scaffold_6540:11894930-11895258 - AGAG-----AGAGCAAGTGAGCGTAGCTCGTACAGAAATA---------------------AATGCC--------------------------ACGGC-GTTTAGTATATTTCACCT--TTGCAAGTCTTTGT-A-GATGCCCGCGCGCCAACTCACT----------------------------------------------CCACTCGCACATGCAAACACAAGC---------------------------------------------------------------------ACAC--------ACTAACATTTATA--------TACTTCTG-TA--------TGTGTGCCTGGC---------------T-ACATT-TGCTGCAAGTT----TCATTCACG-CCGCGTGGCCATCGAAATT-------------------------------------------------------------------------------------TTTGTCG--T----------CGCGTCGCGG--------------------TA--------------------CACA-AAGAAATTGGCCTAAAATTGTAACAGTTT-CT--TT---TGCGA-C---AAC-A-GCAA-----------------------CA----------ACAAGAGCACG--------------ACGCAGAAGAACAAC---------------------------------------------A--A-A---A-------------------------------C---------------------GGCATTGCAGTC-------A------------CGC-
droGri2 scaffold_14624:2256514-2256937 + TGCA---------------------------GCAATGTTGCAGACCGTACAA--AAATAAAAATGCCACAAAAAATGCA---TGCAGCCCAGCGCTGCTGCTTAGTATAT-TCACCT--T-GAGCGTCTTTGG---G----------------------------CCACCAGCACATAGCACAACGCACACACACA--T-G----------------GGC----ACACAC-----------------------------------------------------------------------ACACAC------------ACATACATTTACAGTTGGATA---A----GCAGCAGCAGAGCGCA--------------GCGCAGAGCTGCAAGTT----TCATTCACG-CCGCGTGGCCATCGAAATTGTCGTCG--------TCGTCGTCGTCGTCAACA-------------------------------------------------CTCGTTGTTGGTT----------CGCGTCGCGT--------------------CGCCTCGC-----CTT------CACA-AAGAAATTGGCCTAAAATTGTAACAGTTTTCT--TTT--AACAA-C---AAC-A-AC------------------------------AGCAGCAACAACAGCA-GCAGCAGC--------AGTAG-----CAAC---------------------------------------------A--AGAACTACA-----------------------------------AGCAG---------TCGCAGCTGCAGTTGACGTCGGCAGCGCTGTTTCTGT-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGAG---------------------------ACAGAAATACATTTCGTACAA---------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCACAC----------------A--CACACT--T-GTAACCACTC-------------------------------------------------------------------------------------------------------------ACA--------CACTGACA-----A----GCGCGAACAAGACACA--CA--------------------------------------------CGTGGCCATCAAAGCG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTCC-TT-T--TACAA-C---AAC-G-AAGA-----------------------ATACCAGA------------------------------AGAAGCAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTCGACGTCGA------------CGC-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................ACT--T-GTAACCACTC-------------------------------------------------------------------------------------------------------------ACA--------CACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGCAGTCGACGTCGA------------CG..2121.00220000000000000000
.................................................................................................................................................................................................................................................................................................................................A--------CACTGACA-----A----GCGCGAACAAGACACA--......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTCGACGTCGA------------CG..2811.00100000001000000000
........................................CATTTCGTACAA---------AATTCC-------------------G-----CC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATCAAAGCG--------------------------------------------------------------------------------------GTATCGGTT----------CGC............................................................................................................................................................................................................................................................................................................................................2411.00110000000000000000
............................................................................................................................................................................................................CCACTC-------------------------------------------------------------------------------------------------------------ACA--------CACTGACA-----A----G.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAAC..............................................................................................................................................................................................................................................................2511.00100100000000000000
droSec2
AGAG---------------------------ACAGAAATACATTTCGTACAA---------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCGCAC----------------A--CACACACTT-GTAACCACTC-------------------------------------------------------------------------------------------------------------ACA--------CACTGACA-----A----GCGCGAACAAGACACA--CA--------------------------------------------CGTGGCCATCAAAGCG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTCC-TT-T--TACAA-C---AAC-G-AAGA-----------------------ATACCAGA------------------------------AGAAGCAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTCGACGTCGA------------CGC-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................A---------AATTCC-------------------G-----CCCTGC-ATTTAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...............................................................................................................................CTTTG---------------------------------CCGCAC----------------A--CACACACTT-G...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCAGA------------------------------AGAAGCAAAGC...................................................................................................................................................1911.0010010
dm3
AGAG---------------------------ACAGAAATACATTTCGTACAA---------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCACAC----------------A--CACACT--T-GTTACCACTC-------------------------------------------------------------------------------------------------------------ACA--------CACTGGCA-----A----GCGAGAACAAGACACA--CA--------------------------------------------CGTGGCCATCAAAGCG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTCC-TT-T--TACAA-C---AAC-G-AAGA-----------------------ATACCAGA------------------------------AGAAGCAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTTGACGTCGA------------CGC-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCAGTTGACGTCGA------------....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
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...................................................................................................................................................................................................T--T-GTTACCACTC-------------------------------------------------------------------------------------------------------------ACA--------CACTGGCA-----A----GCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
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..........................................................................................................................................................................................................................................................................................................................................................................CA--CA--------------------------------------------CGTGGCCATCAAAGCG--------------------------------------------------------------------------------------GTA...............................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
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..........................................................................................................................AGCGTCTTTG---------------------------------CCACAC----------------A--CACACT--T-GT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
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..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------GCAGCTGCAGTTGACGTC..................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCA...........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..................................................................................................................................................................................................CT--T-GTTACCACTC-------------------------------------------------------------------------------------------------------------ACA--------CACTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.........................................................................................................................................................................................................TTACCACTC-------------------------------------------------------------------------------------------------------------ACA--------CACTGGCA-----A----GCGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................................................................................T--TAGAGCGTCTTTG---------------------------------CCACAC----------------A--CACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................GTATATTTCACCT--TAGAGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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................................................................................................GC-ATTTAGTATATTTCACCT--TAGAGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-C---AAC-G-AAGA-----------------------ATACCAGA------------------------------..............................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCAGTTGACGTCGA------------CG..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTGCAGTTGACGTCGA------------CGC-2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................ACA--CA--------------------------------------------CGTGGCCATCAAAGCG--------------------------------------------------------------------------------------GT................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................A--CA--------------------------------------------CGTGGCCATCAAAGCG--------------------------------------------------------------------------------------G.................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................ACCT--TAGAGCGTCTTTG---------------------------------CCACAC----------------A--......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................ACTGGCA-----A----GCGAGAACAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGC...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..............................................GTACAA---------AATTCC-------------------G-----CCCTGC-ATTTAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCAGTTGACGTCGA------------....1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA-C---AAC-G-AAGA-----------------------ATACCAGA------------------------------..............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................CTC-------------------------------------------------------------------------------------------------------------ACA--------CACTGGCA-----A----GCGAGAACAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAGA------------------------------AGAAGCAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCA.................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAAGCG--------------------------------------------------------------------------------------GTATCGGTT----------CGCG...........................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................TACAA---------AATTCC-------------------G-----CCCTGC-ATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................ACTGGCA-----A----GCGAGAACAAGACACA--CA--------------------------------------------C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AAGACACA--CA--------------------------------------------CGTGGCCATCAAAGCG--------------------------------------------------------------------------------------..................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GGCCATCAAAGCG--------------------------------------------------------------------------------------GTATCGGT..........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA-----------------------ATACCAGA------------------------------AGAAGCAAAGC...................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................CATTTCGTACAA---------AATTCC-------------------G-----CCCTGC-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGA------------------------------AGAAGCAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGC...............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................CACT--T-GTTACCACTC-------------------------------------------------------------------------------------------------------------ACA--------CACTGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droEre2
AGAG---------------------------ACAGAAATACATTTCGTACAA---------AATTGC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCACAC----------------A--CTCACAC---------A----------CACTTACAGCC-------------------------------------------------------------------------GCACACAC----------ACA--------CACTGGCA-----A----GCGAGAACAAGACACA--CA--------------------------------------------CGTGGCCATCAAAGCG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTCC-TT-T--TACAA-C---AAC-G-AAGA-----------------------ATACCAGA------------------------------AGTAGCAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTCGACGTCGA------------CGC-SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................TTAGTATATTTCACCT--TAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.......................................ACATTTCGTACAA---------AATTGC-------------------G-----CCCTGC-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
....................................................................................................................................................................................................C---------A----------CACTTACAGCC-------------------------------------------------------------------------GCACACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATCAAAGCG--------------------------------------------------------------------------------------GTATCGG...........................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAA-C---AAC-G-AAGA-----------------------ATACCA..............................................................................................................................................................................................2011.0010000100
....................................................................................................................................................................................................C---------A----------CACTTACAGCC-------------------------------------------------------------------------GCACACAC----------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GGCCATCAAAGCG--------------------------------------------------------------------------------------GTATCGGTT----------CGC............................................................................................................................................................................................................................................................................................................................................2511.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------------C---------------------GCAGCTGCAGTCGACGTCGA------------....2211.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGCG--------------------------------------------------------------------------------------GTATCGGTT----------CG.............................................................................................................................................................................................................................................................................................................................................1811.0010000010
................................................................................................................................................................................................................................................................................................................................................................GAACAAGACACA--CA--------------------------------------------CGTGGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
.............................................CGTACAA---------AATTGC-------------------G-----CCCTGC-ATTTAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGT.........................2011.0010001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTCGACGT...................2211.0010000100
..........................................................................................................ATATTTCACCT--TAGAGCGTCTTTG---------------------------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
....................................................................................................................................................................................................C---------A----------CACTTACAGCC-------------------------------------------------------------------------GCACAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010000
droYak3
---------------------------------------------------------------------------------------------------------------------------------TTG---------------------------------CCACAC----------------A--CACGCAC----------------------------------------------------------------------------------------------------------------------------A--------CACTGGCA-----A----GCGAGAACAAGACACA--CA--------------------------------------------CGTGGCCATCAAAGCG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTCC-TT-T--TACAA-C---AAC-G-AAGA-----------------------ATACCAGA------------------------------AGAAGCAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTCGACGTCGA------------CGCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................ACA--CA--------------------------------------------CGTGGCCATCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................16110.0010000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTCGACGTC..................2811.00100100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTCC-TT-T--TACAA-C---AAC-G-AAGA-----------------------....................................................................................................................................................................................................2411.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------GCAGCTGCAGTCGACGTC..................1911.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGA------------------------------AGAAGCAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GC..................................2311.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGA------------------------------AGAAGCAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGC...............................2711.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCAGTCGACGTCGA------------C...1840.25110000000000
droEug1
AGAG---------------------------ACAGAAATACATTTCGTACAA--A------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCACACAACC------AAACACTCACACACA-----------------------------------CGCACAT-------------------------------------------------------------ACACACACAC----------ACA--------AAGTAGCAAAA----CTAGC----GACAGACACA--CA--------------------------------------------CGTGGCCATCAAAACG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTCCTTT-T--TACAA-C---AAC-G-AAC------------------------ATA---------A--------CG--------AACAAGAAGAAGTAAAGCCAA---------------------------------------------AAGA-A---A-------------------------------C---------------------GCAGCTGCAGTCGACGTCGC------------TGC-SizeHit CountTotal NormTotal
No Reads
droBia1
AGAG---------------------------ACAGAAATACACTTTGTACGACAG------AATTCC-------------------G-----CCCTGC-ACTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCACAC----------------A--CACACAC---------A----------CA------CAC-------------------------------------------------------------------------------------------ACA--------C---------ACGAGCCAGC----GACTGACACA--CA--------------------------------------------CGTGGCCATCAAAACG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTCC--TT---TGCAA-C---AACTG--------------------------------------------------------------------AAGAAAGGCCGA---------------------------------------------A--A-A---A-------------------------------C---------------------GCAGCTGCGGCTGGCGTCGC------------CGC-SizeHit CountTotal NormTotal
No Reads
droTak1
AGAG---------------------------ACAGAAATACATTTTGTACAA-AA------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCACAC----------------A--CACACA--TAG----------C------------ACACAC-----------------------------------------------------------------------ACACACAC----------ACA--------CACTGGCG-CA--------CGAGCGACAGACACA--CA--------------------------------------------CGTGGCCATCAAAACG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTCC-TT-T--TACAA-C---AAC-G-GCGA-----------------------AAGGCAGA----A-------------------------CGAAGAAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTCGCCGTCGA------------C---SizeHit CountTotal NormTotal
No Reads
droEle1
AGAG---------------------------ACAGAAATACATTTAATACAA---------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCGCAC----------------A--CACACAC---------A----------CA------C---------------------------------------------------------------------------------------------ACA--------CACATCCG-TA--------CGAGAGACAGACACA--CA--------------------------------------------CGTGGCCATCAAAACG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTTC--TTT---ACAAACGGCAAC-G-GCGA-------------------------------------------------------AGG---CAAAGAAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTCGACGTCG-----------------SizeHit CountTotal NormTotal
No Reads
droRho1
AGAG---------------------------ACAGAAATACATTTCGTACAA---------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCACAC----------------A--CACACA---------------------------------------------------------------------------------------------------------------------------------------------------------CGAGAGACAGACACA--CA--------------------------------------------CGTGGCCATCAAAACG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTC---T-T--TACAA-CGGCAAC-G----G-----------------------CA----------ACAAAGGCA----------AAGG---CAAAGAAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTCGACGTCG-----------------SizeHit CountTotal NormTotal
No Reads
droFic1
AGAG---------------------------ACAGAAATACATTTTGCACAA---------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCACAC----------------A--CACACAA---------A----------CGC----ACAC-------------------------------------------------------------------------------------------ACA--------CACCAGCA-----A----CGGAGAGACAGACACA--CA--------------------------------------------CGTGGCCATCAAAACG--------------------------------------------------------------------------------------GTATCGGTT----------CGCGTCGCGT-----------------------------------------------------TTGGCCTAAAATTGTAACAGTTTTCC--TTT---ACGA-C-------G-A-----------------------------------------------------------------AAAGAAAAGCCAA------------------------------------------------A-A---A-------------------------------C---------------------GCAGCTGCAGTCGACGTCG-----------------SizeHit CountTotal NormTotal
No Reads
droKik1
AGAG---------------------------ACAGAAATAAATTTCGTACAA-AA------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTG---------------------------------CCACAAA-CC------------A--CACACA--T-G----CACTCGG-------------------------CAACAAAATACACTTAAAAAAAAGAAGAAAAATCAAAGGAAATAGAAAAAAAAGACAAACACAC--------ACTC------ACA--------C--------------------------------------------------------------------TCATTCAAGTCCGCGTGGCCCTCAAAACGGAACTAAAAAACTATATGTAG-CAACAACAACA-------------------------------------------------ATCGGTGTCGGTT----------CGCGTCGCGT--------------------T--------------------------------TTGGCCTAAAATTGTAACAGTTTTCT--TT---AACGA-A---AA-----AG--------------------------------------------------------------------AACGCCAAACGCCACAAAAGACGAAAGAAAGAAAAAAAAAAAACGGAAACGCAAAGC-A---A-------------------------------C---------------------GCAACTGCAGTC--CGGCGC------------TGC-SizeHit CountTotal NormTotal
No Reads
droAna3
T--T---------------------------ACAGAAATAAATTTCGTACAA---------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGATCGTCTTTG---------------------------------CCACCTAAAC------------A--CACACT--TTG----------C------------ACACAC---------------------------------------------------------------------------------TAACACACACA--------TACACACA-CA--------CGAGTG-------CTCACTGACA--AGT-ACACTGCGCTGCAAGTTTCTTTCATTCACGTCCGCGTGGCCATCAAAATAAA---------------------AACAACAACAACAACT------ACTACTACAATGTAACAACTACGA----TTG-------TCGGTGTCGGTT----------CGCGTCGCCTCCCATCGCATCGCATCGCGTCGTTTCGTTTCGCGTTTTGGCCA-AA-AAGAAATTGGCCTAAAAATGTAACAGTTTTCT--TT---TACAA-T---AACCG-AAGC---------------------------CA-----------------------------AGAAGAA--AACGCCAA------------------------------------------------A-A---A-------------------------------CA-AACTGCAGTCTGCTGCGTCGCTACTGCAGTCGTCGACGA------------CGT-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................................................................................................................................ACACACA--------TACACACA-CA--------CGAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000002
.....................................................................................................................................................................................................................................C---------------------------------------------------------------------------------TAACACACACA--------TACACACA-CA--------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AA-AAGAAATTGGCCTAAAAAT...................................................................................................................................................................................................................................................................2211.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCATCGCATCGCATCGCG..................................................................................................................................................................................................................................................................................................................2011.001100000
..............................................................................................................................................................................................................................................................................................................................CACA--------TACACACA-CA--------CGAGTG-------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................................CACACACA--------TACACACA-CA--------CGAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
..........................................................................................................................................................................................................................................................................................................................CACACACA--------TACACACA-CA--------CGAGTG-------CT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AACGCCAA------------------------------------------------A-A---A-------------------------------CA-AACTGCAGTCTGC..........................................2711.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAAA---------------------AACAACAACAACC....................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
droBip1
-GTT---------------------------ACAGAAATAAATTTCGTACAA---------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGATCGTCTTTG---------------------------------CCACCCA---------------A--CACACAC---------A----------CA----------CTGGCACAT------------------------------------------------------------------------------------------------------ACGG---------------GCGCGCACTTATA---GT-ACACTGCGCTGCAAGTTTCTTTCATTCACGTCCGCGTGGCCATCAAAAA--------------------AG-CAACAACAACAACAACAATAACAACAAATACAATGTAACAACTACGA----TTG-------TCGGTGTCGGTT----------CGCGACGCGT---------------CGCCTTGCTTCGTTTCGCGTTTTGGCCA--A-AAGAAATTGGCCTAAAAATGTAACAGTTTTCT--TT---TACAA-AA--AAC-CAAAGC---------------------------CATA----A--------CG--------AAGAAGAAGAA--AACGCCAA------------------------------------------------A-A---A-------------------------------CA-AACTGCAG---------TCG--GCT-------GCGTCGC------------TGC-SizeHit CountTotal NormTotal
No Reads
dp5
AGAG-----A--------------AGACCGTACAGAAATA---------------------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TAGAGCGTCTTTGGTCGG----------------------------CCACAC----------------A--CACACAC---AAACCCCCTCGC------------ACAC-------------------------------------------------------------------------------------------ACA--------C------A-----------------ACAAACACA--CA-----------CA-CGCGCTGCAAGTTTCTTTCATTCACGTCCGCGTGGCCATCAAAACGGA---------------------A----------------------------------------------------------AGCATTGTCGGTT----------CGCGTCGCGC--------------------TGCAACGT--------TCGGCTA-AA-AGAAAATCGGCCTAAAATTGTAACAGTTTTCC--TTT---GCAA-C-------G-----------------------------------------------------------------------AAACGCCAA------------------------------------------------A-A---A-------------------------------CA-CGCTGCAG---------TCGCTGCTGCAGTCGACGCTGG---CGTCGTCGCCGT-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................ACAC-------------------------------------------------------------------------------------------ACA--------C------A-----------------ACAAACACA--CA-----------C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--------TCGGCTA-AA-AGAAAATCGGC...........................................................................................................................................................................................................................................................................2211.0010000000001
................................................................................................................................................................................................................................ACAC-------------------------------------------------------------------------------------------ACA--------C------A-----------------ACAAACACA--CA-----------CA-......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-A---A-------------------------------CA-CGCTGCAG---------TCGCTGCTGCAGTC........................2711.0010100000000
...............................................................................................................................................................................................................CTCGC------------ACAC-------------------------------------------------------------------------------------------ACA--------C------A-----------------ACAAACACA--CA-----------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
....................................AATA---------------------AATTCC-------------------G-----CCCTGC-ATTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------TCGCTGCTGCAGTCGACGCTGG---C............2511.0010100000000
...................................................................................................................................................................................................................C------------ACAC-------------------------------------------------------------------------------------------ACA--------C------A-----------------ACAAACACA--CA-----------C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.....................................................................................................................................TCGG----------------------------CCACAC----------------A--CACACAC---A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310100000000
................................................................................................................................................................................................................................ACAC-------------------------------------------------------------------------------------------ACA--------C------A-----------------ACAAACACA--CA-----------CC-......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.2010010000000
droPer2
AGCGGAGAAA-----A---GACGTA------ACAGAAATA---------------------AATTCC-------------------G-----CCCTGC-ATTTAGTATATTTCACCTGTATGAGCGTCTTTGGTCGG----------------------------CCACAC----------------A--CACACAC---------A----------CA------CACAC-----------------------------------------------------------------------ACAC------------------------------------------------------ACACA--CA----------------AACTGCAAGTTTCTTTCATTCACGTCCGCGTGGCCATCAAAACGGA---------------------A----------------------------------------------------------AGCATTGTCGGTT----------CGCGTCGCGC--------------------TGCAACGT--------TCGGCTA-AA-AGAAAATCGGCCTAAAATTGTAACAGTTTTCC--TTT---GCAA-C-------G-----------------------------------------------------------------------AAACGCCAA------------------------------------------------A-A---A-------------------------------CA-CGCTGCAG---------TCGCTGCTGCAGTCGACGCTGG---CGTCGTCGCCGT-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------------------------AGCATTGTCGGTT----------CGCGTCGCGC--------------------T................................................................................................................................................................................................................................................................................................................2511.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCAGTCGACGCTGG---C............1911.001010000
..................................GAAATA---------------------AATTCC-------------------G-----CCCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
...................................................................................................................................................................................................................................CAC-----------------------------------------------------------------------ACAC------------------------------------------------------ACACA--CA----------------AACTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19100.101100000
droWil2
CG-T---------------------------ACAGAAATAAATACTTTAAAA---------TATTTC-------------------G-----CCCTGC-ATTTAGTATATTTCACCT--TTGGGTGTCTTTG---------------------------------CCACAA----------------A--CACACAT---------A----------CACACACAAAC------GGACAACAA------------------------------------------------------ACAC--------ACT--------CA--------CACTCA------------------------------CATGTA---GTCAAAGCGCGCTGCAAGTT----TCATTCACGCCCGCGTGGCCATCAAAT---------------------AG-CAACAGCAACAACAACG-------------------------TACGATATTTTTTTGTTGGTCGGTATCGGTT----------CGCGTAGCAT------------------------------------TCGGCTAAAAAAGAAATTTGGCCCAAAATTGTAACAGTTTTTCCTT-T--TACAA-C---AAC-A-AAGAGAAATAAAAACTATAACAACAACATAACAAAAGGAAAATAAAAA-GA-------AATG---AAAAGAAAAACTTA---------------------------------------------A--A-AACTG---------------CA----CAGTTGCAGTCA-TGCTGCTG---------CCTCTGCTGCAGTTGACGTCGA---CTTCG--GTTGC-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGACGTCGA---CTTCG--GT....1911.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGCTGCAGTTGACGTC..................1911.00110000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTTGTTGGTCGGTATC.............................................................................................................................................................................................................................................................................................................................................................2111.00110000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTTGGTCGGTATCGGTT----------CGC............................................................................................................................................................................................................................................................................................................................................2411.00100100
droVir3
AGAG-----AGC---------CGAGGCTCGTACAGAAATA---------------------AATGCCACAG----TGCAGCGCACGG-----CCCAGC-GTTTAGTATATTTCACCT--TTGCGCGTCTTTGG-G-GCTGCCAGCGCGCCAACTCACTCCACTCGCCGCAC----------------A--CACACAC---------A----------CA------CACACGCGCGCAT-----------------------------------------------------------------------------------A--------C------------------------ATAGGCACA--CGTGTATTTGT-ACATT-TGCTGCAAGTT----TCATTCACG-CCGCGTGGCCATCGAAATT-------------------------------------------------------------------------TTGTCGTTG----CAGTCGGTTGGGGTCGGGTCACGTGGCGT--------------------T---CCGTTCC--GTT------CCCA-AGGAAATTGGCCTAAAATGGTAACAGTTTTCT--TTTATTACAA-C---AG--G-AAC---AACACAAACAAGGACA--AACATAACAGCAGCAACAACAACA-ACAACAACGAGAA---CAACGAGAA---------------------------------------------------------CAACAGCAATTACCATTGCATTCGCAGTCGCTGTCGCTGTCGCAG---------TCGCAGCTGCAGTTGACGTCGA------------CAG-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCAGTTGACGTCGA------------CAG-2117.007311000000000000000000010000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCAGTTGACGTCGA------------CA..2014.004100000000000000100000010000000000000000000000000000000000000010
...................................................................................................................................................................................................................................CACGCGCGCAT-----------------------------------------------------------------------------------A--------C------------------------ATAGGCAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003000000000000000000002000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................ACGCGCGCAT-----------------------------------------------------------------------------------A--------C------------------------ATAGGCAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002001000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCAGTTGACGTCGA------------C...1912.002001000000000001000000000000000000000000000000000000000000000000
.................................................................................GCACGG-----CCCAGC-GTTTAGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000002000000000000000000000000000000000
...................................................................................................................................................................................................................................CACGCGCGCAT-----------------------------------------------------------------------------------A--------C------------------------ATAGGCACA--......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002002000000000000000000000000000000000000000000000000000000000000
................................................................................................................CACCT--TTGCGCGTCTTTGG-G-GCTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAG---------TCGCAGCTGCAGTTGACGTCGA------------C...2811.001100000000000000000000000000000000000000000000000000000000000000
...................................AAATA---------------------AATGCCACAG----TGCAGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................ACGCGCGCAT-----------------------------------------------------------------------------------A--------C------------------------ATAGGCACA--......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAG---------TCGCAGCTGCAGTTGACGT...................2411.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TCACTCCACTCGCCGCAC----------------A--C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCAGCTGCAGTTGACGTCGA------------C...2311.001000000000000000000000000000000000000000000000000000000000000100
....................................AATA---------------------AATGCCACAG----TGCAGCGCACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATCGAAATT-------------------------------------------------------------------------TTGTCGTTG----CAGT..............................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000010000000000000000000000000000000000000000000000
.................................................................................................................ACCT--TTGCGCGTCTTTGG-G-GCTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCAGCTGCAGTTGACGTC..................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................GAAATA---------------------AATGCCACAG----TGCAGCGCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000001000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCTGCAGTTGACGTCGA------------CAG-2411.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................CT--TTGCGCGTCTTTGG-G-G...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TCGCCGCAC----------------A--CACACAC---------A----------CA------C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.603002000000000000000000000000000100000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-ACAACAACGAGAA---CAACGAGAA---------------------------------------------------------CA..........................................................................................2820.501000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................CTCGCCGCAC----------------A--CACACAC---------A----------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA-ACAACAACGAGAA---CAACGA........................................................................................................................................................2630.331000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-ACAACAACGAGAA---CAACGAGAA---------------------------------------------------------CA..........................................................................................2530.331000000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAACAGCAGCAACAACAACA-AC............................................................................................................................................................................2430.331000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAGAA---CAACGAGAA---------------------------------------------------------CAACA.......................................................................................2240.251000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................ACAC---------A----------CA------CACACGCGCGCAT-----------------------------------------------------------------------------------A--------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.101000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................CGCCGCAC----------------A--CACACAC---------A----------CA------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19170.061001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACAACA-ACAACAACG.....................................................................................................................................................................23200.051000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................CACAC---------A----------CA------CACACGCGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGTCGCTGTCGCAG---------T.....................................18200.051000000000000000000000000000000000000001000000000000000000000000
droMoj3
AGAG-----AGAGCAAGTGAGCGTAGCTCGTACAGAAATA---------------------AATGCC--------------------------ACGGC-GTTTAGTATATTTCACCT--TTGCAAGTCTTTGT-A-GATGCCCGCGCGCCAACTCACT----------------------------------------------CCACTCGCACATGCAAACACAAGC---------------------------------------------------------------------ACAC--------ACTAACATTTATA--------TACTTCTG-TA--------TGTGTGCCTGGC---------------T-ACATT-TGCTGCAAGTT----TCATTCACG-CCGCGTGGCCATCGAAATT-------------------------------------------------------------------------------------TTTGTCG--T----------CGCGTCGCGG--------------------TA--------------------CACA-AAGAAATTGGCCTAAAATTGTAACAGTTT-CT--TT---TGCGA-C---AAC-A-GCAA-----------------------CA----------ACAAGAGCACG--------------ACGCAGAAGAACAAC---------------------------------------------A--A-A---A-------------------------------C---------------------GGCATTGCAGTC-------A------------CGC-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........AGCAAGTGAGCGTAGCTCGTACAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--T----------CGCGTCGCGG--------------------TA--------------------CACA-AAGA..................................................................................................................................................................................................................................................................................2211.001000001
.................................................................................................................ACCT--TTGCAAGTCTTTGT-A-GATGCCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAC---------------------------------------------A--A-A---A-------------------------------C---------------------GGCATTGCA...........................2111.001100000
......................................................................................................................................A-GATGCCCGCGCGCCAACTCACT----------------------------------------------C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
................................CAGAAATA---------------------AATGCC--------------------------ACGGC-GTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droGri2
TGCA---------------------------GCAATGTTGCAGACCGTACAA--AAATAAAAATGCCACAAAAAATGCA---TGCAGCCCAGCGCTGCTGCTTAGTATAT-TCACCT--T-GAGCGTCTTTGG---G----------------------------CCACCAGCACATAGCACAACGCACACACACA--T-G----------------GGC----ACACAC-----------------------------------------------------------------------ACACAC------------ACATACATTTACAGTTGGATA---A----GCAGCAGCAGAGCGCA--------------GCGCAGAGCTGCAAGTT----TCATTCACG-CCGCGTGGCCATCGAAATTGTCGTCG--------TCGTCGTCGTCGTCAACA-------------------------------------------------CTCGTTGTTGGTT----------CGCGTCGCGT--------------------CGCCTCGC-----CTT------CACA-AAGAAATTGGCCTAAAATTGTAACAGTTTTCT--TTT--AACAA-C---AAC-A-AC------------------------------AGCAGCAACAACAGCA-GCAGCAGC--------AGTAG-----CAAC---------------------------------------------A--AGAACTACA-----------------------------------AGCAG---------TCGCAGCTGCAGTTGACGTCGGCAGCGCTGTTTCTGT-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................ACAACGCACACACACA--T-G----------------GGT----....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00220
..................................................................................................................................................................................................................................................................................................................................................................GCAGAGCGCA--------------GCGCAGAGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
......................................................................................................................................................................................................................................................................................................................................TTTACAGTTGGATA---A----GCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101
.......................................................................................................................................................................ACCAGCACATAGCACAACGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
....................................................................................................................................................................................................................................................................................................................................CATTTACAGTTGGATA---A----GCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101
...............................................................................................................................................................................................................................................................................................................................................................GCAGCAGAGCGCA--------------GCGCAGAGCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101
...........................................................................................................................................................................................ACACACACA--T-G----------------GGC----ACACAC-----------------------------------------------------------------------AC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50110
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------------------------AGCAGCAACAACAGCA-GCA...........................................................................................................................................................................21200.30660
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------------------------AGCAGCAACAACAGCA-GCAGCA........................................................................................................................................................................24200.10220
..........................................................................................................................................................................................CACACACACA--T-G----------------GGC----ACACAT-----------------------------------------------------------------------T......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05110
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCA-GCAGCAGC--------AGTA..........................................................................................................................................................21200.05101
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-C---AAC-A-AC------------------------------AGCAGCAACAACAGCA-GCAG..........................................................................................................................................................................28200.05110

Generated: 05/18/2015 at 09:08 AM