ID:

dsi_23348

 Coordinate:

3r:9373458-9373607 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.1 -28.7 -28.6

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CCGTTAATTCGAACTTGAGAGCGTCGGTGTGCGTGAGAGCTTGAAACAGGGTGAGAAAGAGAGAGGGAGAAACAAAGCGCGGGCATGTCCGAATTGAAAAATGCTCTACTCGAACTGGAGCACAGGGGCGCATCAAATAAAGAGGAATAACAAATGCGAGTGATGGAAAATCCACGCCTGAATCAGTCGCAGGCTTGCGTGTGCGTGTGTGTCACCTTTTGTAGTGGTTGTGCGGGGAGTATTTTCCCTG
*********************************************************************.........((((((.(((((...(((.....(((((((.......)))))))))))))))........................(((((.(((((((...))))........))).))))).))))))**************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 M024
male body		 O002
Head
 SRR553488
RT_0-2 hours eggs
.....................................................................AAACAAAGCGCGGGCATGTC................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.......TTCGAACTTGAGAGCGTCGGT.............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................CGGGCATGTCCGAATTGA......................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0
..............................................................................................................................................................................................AGGCTTGCGTGTGCGTGT.......................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................GTTCTGGGGGGAGTATGTTC.... 20 3 1 1.00 1 0 0 0 0 1 0 0 0
.........................................................AGAGAGAGGGAGAAACAAAGCGCGGG....................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0
.................................................................................................................................................................................CTGAATCAGTCGCAGGCTTGC.................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0
...............................................AGGGTGAGAAAGAGAGAG......................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0
..........GAACTTGAGAGCGTCGGTGTTT.......................................................................................................................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................GTTCTGGGGGGAGTATTGTC.... 20 3 1 1.00 1 0 0 0 0 0 1 0 0
...................................................................................................................................ATCAAATAAAGAGGAATAACAA................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0
...............................................................................CGGGCATCTCCGAATT........................................................................................................................................................... 16 1 2 0.50 1 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................................TGGTTCTGGGGGGAGTAT........ 18 2 3 0.33 1 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................................GGTTCTGGGGGGAGTAT........ 17 2 10 0.30 3 0 3 0 0 0 0 0 0
.............................................................................................................................................................GAGTGATTGAAAATCC............................................................................. 16 1 4 0.25 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................GGGGATGTGCGGGGAGTA......... 18 2 6 0.17 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................GTTCTGGGGGGAGTAT........ 16 2 20 0.15 3 0 3 0 0 0 0 0 0
..........................................GAAACAGCGTGAGGAAGA.............................................................................................................................................................................................. 18 2 9 0.11 1 0 0 0 1 0 0 0 0
..............................................................................GCGGTCATGTCGGAATT........................................................................................................................................................... 17 2 9 0.11 1 0 0 0 0 0 0 0 1
..............................................................................GCGGCCATGTCGGAATT........................................................................................................................................................... 17 2 16 0.06 1 0 0 0 0 0 0 0 1
...............................................................................................................................................................................................................................CTGGTTCTGGGGGGAGTAT........ 19 3 17 0.06 1 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................................GGTTCTGCGGTGAGTATG....... 18 3 20 0.05 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................GGTTCTGGGGGGAGTA......... 16 2 20 0.05 1 0 0 0 0 0 0 0 1
............................................................................................................................................................................................GCAGGGTTGCGTGTTC.............................................. 16 2 20 0.05 1 0 1 0 0 0 0 0 0

Anti-sense strand reads

GGCAATTAAGCTTGAACTCTCGCAGCCACACGCACTCTCGAACTTTGTCCCACTCTTTCTCTCTCCCTCTTTGTTTCGCGCCCGTACAGGCTTAACTTTTTACGAGATGAGCTTGACCTCGTGTCCCCGCGTAGTTTATTTCTCCTTATTGTTTACGCTCACTACCTTTTAGGTGCGGACTTAGTCAGCGTCCGAACGCACACGCACACACAGTGGAAAACATCACCAACACGCCCCTCATAAAAGGGAC
****************************************************.........((((((.(((((...(((.....(((((((.......)))))))))))))))........................(((((.(((((((...))))........))).))))).))))))********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 M023
head
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
.......................................................................................AGGCATAACTTTCTACGAGA............................................................................................................................................... 20 2 2 0.50 1 0 1 0 0 0
.....TTAAGCTTGAACTCT...................................................................................................................................................................................................................................... 15 0 2 0.50 1 1 0 0 0 0
........AGCTTCAACTCTGGCATCC............................................................................................................................................................................................................................... 19 3 7 0.14 1 0 0 0 1 0
..............................................................................................................................................TCCTTATTGTTTCGGGTCACT....................................................................................... 21 3 7 0.14 1 0 0 1 0 0
...................................................................................GTACAGGCTTAACTTTAG..................................................................................................................................................... 18 2 7 0.14 1 0 0 1 0 0
.....TTAAGCTTGGACTCT...................................................................................................................................................................................................................................... 15 1 10 0.10 1 1 0 0 0 0
.........................................................................................................................................................................TAGGTGCTGACCTAGTGAG.............................................................. 19 3 13 0.08 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:9373408-9373657 - dsi_23348 CCGTTAATTCGAACTTG----AGA------GCGTCGGTGTGCGTG----AGAGCTTGAAACA-------------------------------------------------------------------GG----------------------------GTGAGAAAGAGAGAGGGAGAAACAAAG-------------------------------------------CGCGGGCATGTC-------------------------------------------------------------------------------------------CGAATTGAAAAATGCTCTACTCGAACTGGAGCAC------------------AGGGGCGCATCAAA------------TAAAG---------------------------------------------AG----------GAA-TAAC------------------------------------------------------AAATGCGAGTGATGGAAAATCCACGCCTGAATCAGT-CGCAGGCT-TGCGTGTGCGTGTGTGTCACCTTTT--GTAGTG------GTTGTGC---G------------------GGGA-GTATTTT--CCCTG
droSec2 scaffold_0:10081970-10082219 - CCGTTAATTCGAACTTG----AGA------GCGTCGGTGTGCGTG----AGAGCTTGAAACA-------------------------------------------------------------------GG----------------------------GTGAGAAAGAGAGAGGGAGAAACAAAG-------------------------------------------GGCGGCCATGTC-------------------------------------------------------------------------------------------CGAATTGAAAAATGCTCTACTCGAACTGGAGCAC------------------AGGGGCGCATCAAA------------TAAAG---------------------------------------------AG----------GAA-TTAC------------------------------------------------------AAATGGGAGTGATGGAAAATCCACGCCTGAATCAGT-CGCAGGCT-TGCGTGTGCGTGTGTGTCACCTTTT--GTAGTG------GTTGTGC---G------------------GGGA-GTATTTT--CCCTG
dm3 chr3R:11877138-11877405 + CCGTTAATTCGAACTTG----AGA------GCGTCGGTGTGCGTG----AGAGCTTGAAAGA-------------------------------------------------------------------GC----------------------------GAAATCAAGAGAGAGGAAGAAACAAAG-------------------------------------------CGCGGGCATATC-------------------------------------------------------------------------------------------CGAATTGAAAAATGCTCTACTCAAACGTGAGCACAGT---------------AGGAGCGCATCAAAACAA-----TATTAAAG---------------------------------------------AGACAGATGCATGAA-TAAT------------------------------------------------------AAATGGGAGTGATGGAAAATCCACGCCTGATTCAGT-CGCAGGCT-TTCGTGTGCGTG--TGTCACCTTTT--GTAGTG------GTTGTGC---G------------------GGGG-GTATTTG--CCGTG
droEre2 scaffold_4770:11399350-11399655 + CCGTTAATTCGAACTTG----AGA------GCGTCGGTGTGCGTG----AGAGCTTAAAAGAGCG--CTTAAGAATAATATTGAAAGA-----------------------------------------GC----------------------------GAGATAAAGAGATAGGGAGAAACACGG-------------------------------------------CGCGGGCTAGTC-------------------------------------------------------------------------------------------CGACATGAAAAATGCTCTACAAAAACTGGAGCACAATAA---ATCTAG-CCCAGGGACGCAACAAAACAA-----TATTAAAG---------------------------------------------AGGCAAATGCATGAA-TAAT------------------------------------------------------AAATGGAAGTGATGGAAAATCCACGCCTTAATCATT-CGCAGTCT-TGCGTGTGCGTCTGGATCACCTTTT--GTAGTG------TTGGTGCA-AG------------------GGGG-GTG-TTG--CCCTG
droYak3 3R:14557635-14557951 - CCGTTAATTCGAACTTG----AGA------GCGTCGGTGTGCGTG----AGAGCTTAAAAGAGCG--CTTAAGAATAAGATTAAAAGA-----------------------------------------GC----------------------------GAGAGAAAGAGAGAAGGAGAAACACAG-------------------------------------------CGCGGGTATGTC-------------------------------------------------------------------------------------------CGACTTGAATAATGCTCTACTGGAACTGGAGCACAGTAA---ATCTAA-CTCAGGGACGCATCAAAACAA-----TATTGATG---------------------------------------------AGGCAAATGCATGAA-TAAT------------------------------------------------------ATATGAGAGTGATAGAAAATACACGCCTGAATCAGA-CGCAGGCT-TGCGTGCGCGTCTGTGTCACATTTT--GTAGTG------TTGGTGCA-GGGGGGAGGTGGG-------GT-AGGTG-TTG--CCCTG
droEug1 scf7180000409797:1654835-1655139 - CCGTTAATTCGAACGAG----AGA------GCGTCGGTGTGCGTG----AGAGCTTAGAAGAGCG--CTTAA-------------------------------------------------------------GAATGGG--------------------AGAGTACGATAGAGAGGGAGTCAAAG-------------------------------------------CGGGGATATATC-------------------------------------------------------------------------------------------CGACTTATGGAATGCTCTACTATAACTCAAGCACTAATG---CCTGTT-CTCAGGGTCGGTTACTAAGAT-AC-AAGTTCAAG---------------------------------------------GGAGAACTGGATGAA-TAATTAAATTAATTTGATA---TTG------CGTTC---------------------------------CATGATAATCCGCTCCTGAATCATT-TACGGTAT-GGCGTGTGCGTGTGTGTCACCATTT--T-----------GTTGGTCA----------GGG--------GGAG-GGA-CTG--CCCTG
droBia1 scf7180000302136:1496138-1496396 + CCGTTAATTCGAAATGG----CGA------GCGTCGGTGTGCGTG----AGAGCTTGGAATAG------------------------------------------------------------------------------------------------------------------TAGGCAAAG-------------------------------------------CTTGAGCATATC-------------------------------------------------------------------------------------------CGACCAGTGGAATGCCCTGCTGAAACTGGAGCACAGTTA---AATTGA-GGCAGGGGCGGATCAAAGGAA-AA-ACGT-T-----AAGG---------------------------------------GG-CGGCAGAGTGAA-TAGTTAAATAAA-------------------------------------------------------------AAAATCAACTCCTGAGTCAGT-CACGGGCT-TTCGAGTGCGTGTGTGTCACCTTGT--T-----------AGCGGGCA-AA-G-----GGG--------GGTG-GGG-TTGCGGCCTG
droTak1 scf7180000415242:230367-230608 - CCGTTAATTCGAAATGG----GGA------GCGTCGGTGTGCGTG----AGAGCTTGGAATT----------------------------------------------------------------------------------------------------------AGAGAGGGAGA---------------------------------------------------GAGAGCATAGC-------------------------------------------------------------------------------------------CGACTACTGGAATGCTCTACTGGAACTGGAGCACAGTTA---TGTTAG-CACAGGGGCGGAGTAAG--GA-ATAAAGT-C-----AGGG---------------------------------------GG------GTATGAA-TAATAA------TATAATAA-----------------------------------------------------------TACTTCTGTATCACTCCGTTGTCT-TGCGTGTGCGTGTGTGTCACCTTCG--GTGGG-------T-----------------GGG--------GGTG-GGG-TTG--CCCTG
droEle1 scf7180000491080:1673823-1674144 + CCGTTAATTCGAACGAG----AGA------GCGTCGGTGTGCGTG----AGAGCTTAAAAGTACG--CTTAA-------------------------------------------------------------GAGAGAG--------------------AGAGAGAGCGGGAGCGGTTAACAAAG-------------------------------------------CGTC-GCATATC-------------------------------------------------------------------------------------------CGACTAATGGAATGCTCTCCTGAAACTGGAGAACAGTTA---A-TCAG-TCCATATACAGATCTTGAGAA-AT-ATGT-C-----AAGG---------------------------------------GG------GTATGAA-TAATTTAATTATTTTAATGATATTTTTGTTTTGTT-GATATTA----TGTGT--------AGG---GACCCGAAAGATACCAGACTGAGTCAGT-CACTGGCT-TGCGTGTGCGTATATGTCGCCTTTT--GGGACG------G-----------------AGG--------GGGA-AGG-CTGC-CCCTG
droRho1 scf7180000779241:83638-83970 - CCGTTAATTCGAACCAG----AGA------GCGTCGGTGTGCGTG----AGAGCTTGGAAGAACG--CTTAA-------------------------------------------------------------GATATAGAGAGAGAGAGTATGGTTAA-----------GAAGTGGTTGACAAAG-------------------------------------------CGCG-GCATATC-------------------------------------------------------------------------------------------CGACTAATGGATTGCTCTACTATAACTTGAACAAAGTAA---AATCAG-TCCAGGAGCAGATCTAGAGAA-AA-ATGT-T-----G-AG---------------------------------------GG------CTATAAA-TAATGAAATTCATTTAATAGTTTTTTTGT-------G------ATACTACATACATTTGTACGAGTATTATGAATAATGCGCGCCTAAATCAGC-CACAGACT-TGCGTGTGCGTGTAAGTCACCTTTT--GTGGAG------G-----------------AAG--------GGAA-GGG-CTG--CCCTG
droFic1 scf7180000452523:1268560-1268863 + CCGTTAATTCGAACTAG----AGA------GCGTCGGTGTGCGTG----AGAGCTTGGAAGAGCG--CTTAA-------------------------------------------------------------GAAAGCG--------------------------TGATTGAGAGCGAAACAAAG-------------------------------------------CGCGGGCATATC-------------------------------------------------------------------------------------------CGACTAATGGCATTCACTACTGGAACTGAAACACAGTTA---TATTGATTTAAGAGGCGTATTTGAAGAAGAA-ATGT-T-----TAAG---------------------------------------GG------GTTTGAA-TAATTAAATTCATTTAATGATTTTT------TGTTGG------ATGTTACGT-------------------CGGGTATCTGCGGCTGAATCAGA-AACAAACT-TGCGTGTGCGTGTGTGTCACCCTTT--GTTGTT------T-----------------GGG--------GAGG-GGG-CTG--CTTTG
droKik1 scf7180000302639:786233-786450 - CCGTTAATTTGAAAGAGCGAGAGA------GCGCCGCTAAG---GCGAGCGAGATAGAGCGA--G--CG------TAAGCTTGTTGGA-----------------------------------------GC------GCGCGAGAGAGCGGCTGAGTCG-----------GCGGTGGTTGACAAAG-------------------------------------------A-----------------------------------------------------------------------------------------GGGCGAGTCTATACGACTGCTGGAATGCTCTACCT-----GGGGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTAAATCACT-CACAGGCT-TGCGT------GTGTGTCACCCTCT--TAGGAG------AGGGAGC---A------------------GGG--GCATCTG--CCC--
droAna3 scaffold_13250:286108-286396 + CCGTTAATTCGAACGGG----AGA------GCCGCAGCGTCGGTG----TTTGTTCGAGAGA-------------------------------------------------------------------GC----------------------------TTACGAAAGAGCGACAAAAAAAAAAACCAGTGGCGCTGT----------TGTTTCCCAAGGGGGT--------------TGATCCCTGGTAGGTAGTTAGGTAGAAGGTTTGAATGGAAATCCATTCCTCCACTGGCCCT---CCCGTGATTGACAAAGACCTCGGATTAGGCAGACTA-----------------------------------------------------------------------C-----TGG-A---------------------------------------------------------------------------------------------------------------------GGC--------GGAGTCCTCTACCTAAGCCAGT-CACCAGT----GATGTGCGTGTGTGTCATGCTCG--CCGGG-------T-----------------GAT------GAATGC-GTATTGC--GCGCG
droBip1 scf7180000396413:836660-836966 + CCGTTAATTCGAACGGG----AGAGGCGCAGCGTCGGTGTTTGTA----TG---CCGAGAGA-------------------------------------------------------------------GC-----------------------------TATGAAAGAGCGACA-AGAAACAG-----TGGCGCTGTGATGTTTTGTTGTTATTTCAGGGGGT--------------TGATGCCTGGTAGGTAGGTAG---GAATGCTTGAATGGAAATCCTTCCCTTT-----CCCTGGGCCCGTGATTGACAAAGAACTCGGATTAGGCAGACTA-----------------------------------------------------------------------C-----TGG-A-----------------------------------------------------------------------------------------------------------------------------------GGCCCTTACCTAAATCAGT-CACCGATG-TGCGT------GTGTGTCATGCTCGTTGTCGTT------GGGGGGCAGGAGAAGCGGTAGGGTGATGAATAC-ATATTGC--GCGCG
dp5 2:26199083-26199399 - CCGTTAATTCGAATGCG--GCTGC------GCGTCAGTGAGTG--------------TTGGTGTGTCTCTGTGTGTGTGTTTGTTTGC-----------------------------------------GTGAAAAAGGG----------------------------AGAGTGAGAGAGACG---------CGCTTTGAC------------------GAGGTCATAGC----CGATAGC-------------------------------------------------------------------------------------------CGACTTGTGGAATGCTCTACTCTA-CTGAAACGTCATAGATAACGTA-AGGAAGTCCCGTCGTAGAGGAGGCC-ATTC-----TCG-AGGACTCTGCCTTACCTTATATCCAATATACTTTGACGTTGACGCAAA--CAGGAGCTTGC------------------------------------------------------GTGTGGAAGGGCTGATATACATATGCCTGATTTATG-CCCT-----------------------------------------GTTGGTGTAC---T------------------GGA-------AA--CCCTA
droPer2 scaffold_6:1529776-1530090 - CCGTTAATTCGAATGCG----GCTGC----GCGTCAGTGAGT--------------GTTGGTGTG--TCTGTGTTTGTGTTTGTTTGC-----------------------------------------GTGAGAAAGGG----------------------------AGAGTGAGAGAGACG---------CGCTTTGAC------------------GGGGTCATAGC----CGATAGC-------------------------------------------------------------------------------------------CGACTTGTGGAATGCTCTACTCTA-CTGAAACGTCATAGATAACGTA-AGGAAGTCCCGTCGTAGAGGAGGCC-ATTC-----TCG-AGGACTCTGCCTTACCTTATATCCAATATAGTTTGACGTTGACGCAAA--CAGGAGCTTGC------------------------------------------------------GTGTGGAAGGGATGATATACATATGCCTGATTTATG-CCCT-----------------------------------------GTTGGTGTAC---T------------------GGA-------AA--CCCTA
droVir3 scaffold_13047:4074660-4074877 - CCGTTAATTCGAAAAAG----CGA------G----GGAGTGCAGA----------------AGCG-----------------------TCACTCACACGCTCTCTCGGTGAGAGCGAAGAGCGAATCGA------------------------------GCTAGAAAGAGAAAGAT------------------CTAAAAA------------------AAGGTTAAATG----ATATTAA-------------------------------------------------------------------------------------------CGACCGGT-AAATACTCTACTCTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTACTATAATT-GGCAAACTGTGCGTGTTTCTATGGACTTGCTTCT--TTATTAAGGGTTGGA--------------------------GT-ACCTA-TTT--ACATG
droMoj3 scaffold_6540:21069508-21069528 - CCGTTAATTCGAAATCG----CGA------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14906:721080-721182 - CCGTTAATTCGAAAC-G----CGA------GCGA--------GTG----AGAGCGTA----CGTC-----------------------TCACTCATACAC----TCAACAAGAATAGAGAGC-------------------------------------GAGTGAGTGAGTGAGTGAGAAGCAAAA-------------------------------------------CGCCGACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCGTTAATTCGAACTTG----AGA------GCGTCGGTGTGCGTG----AGAGCTTGAAACA-------------------------------------------------------------------GG----------------------------GTGAGAAAGAGAGAGGGAGAAACAAAG-------------------------------------------CGCGGGCATGTC-------------------------------------------------------------------------------------------CGAATTGAAAAATGCTCTACTCGAACTGGAGCAC------------------AGGGGCGCATCAAA------------TAAAG---------------------------------------------AG----------GAA-TAAC------------------------------------------------------AAATGCGAGTGATGGAAAATCCACGCCTGAATCAGT-CGCAGGCT-TGCGTGTGCGTGTGTGTCACCTTTT--GTAGTG------GTTGTGC---G------------------GGGA-GTATTTT--CCCTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................AAACAAAG-------------------------------------------CGCGGGCATGTC-------------------------------------------------------------------------------------------...............................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
.......TTCGAACTTG----AGA------GCGTCGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.......................................................................................................................................................................................................................................CGGGCATGTC-------------------------------------------------------------------------------------------CGAATTGA.......................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCT-TGCGTGTGCGTGT..........................................................................1811.00100000000001000000
......................................................................................................................................................................AGAGAGAGGGAGAAACAAAG-------------------------------------------CGCGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAATCAGT-CGCAGGCT-TGC....................................................................................2111.00100000000100000000
.............................................................A-------------------------------------------------------------------GG----------------------------GTGAGAAAGAGAGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
..........GAACTTG----AGA------GCGTCGGTGTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................ATCAAA------------TAAAG---------------------------------------------AG----------GAA-TAAC------------------------------------------------------AA...................................................................................................................................2211.00100000000000010000
droSec2
CCGTTAATTCGAACTTG----AGA------GCGTCGGTGTGCGTG----AGAGCTTGAAACA-------------------------------------------------------------------GG----------------------------GTGAGAAAGAGAGAGGGAGAAACAAAG-------------------------------------------GGCGGCCATGTC-------------------------------------------------------------------------------------------CGAATTGAAAAATGCTCTACTCGAACTGGAGCAC------------------AGGGGCGCATCAAA------------TAAAG---------------------------------------------AG----------GAA-TTAC------------------------------------------------------AAATGGGAGTGATGGAAAATCCACGCCTGAATCAGT-CGCAGGCT-TGCGTGTGCGTGTGTGTCACCTTTT--GTAGTG------GTTGTGC---G------------------GGGA-GTATTTT--CCCTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................................CGAACTGGAGCAC------------------AGGGGCGC...................................................................................................................................................................................................................................................................................2111.0011000
............ACTTG----AGA------GCGTCGGTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
dm3
CCGTTAATTCGAACTTG----AGA------GCGTCGGTGTGCGTG----AGAGCTTGAAAGA-------------------------------------------------------------------GC----------------------------GAAATCAAGAGAGAGGAAGAAACAAAG-------------------------------------------CGCGGGCATATC-------------------------------------------------------------------------------------------CGAATTGAAAAATGCTCTACTCAAACGTGAGCACAGT---------------AGGAGCGCATCAAAACAA-----TATTAAAG---------------------------------------------AGACAGATGCATGAA-TAAT------------------------------------------------------AAATGGGAGTGATGGAAAATCCACGCCTGATTCAGT-CGCAGGCT-TTCGTGTGCGTG--TGTCACCTTTT--GTAGTG------GTTGTGC---G------------------GGGG-GTATTTG--CCGTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAGT-CGCAGGCT-TTCGTG.................................................................................2217.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000230100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGT-CGCAGGCT-TTCGT..................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCT-TTCGTGTGCGTG--TG.......................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGGAGTGATGGAAAAT.................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000001000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTCAGT-CGCAGGCT-TTCG...................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAGT-CGCAGGCT-TTCGTGT................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAGT-CGCAGGCT-TTCGTGTGCG.............................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................GCACAGT---------------AGGAGCGCATCAAA.............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CGTTAATTCGAACTTG----AGA------GC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTT--GTAGTG------GTTGTGC---G------------------G..................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAGT-CGCAGGCT-TTCGTGTGCGT............................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
....................................................................................................................................................................................................................................................................................................................................................................ACGTGAGCACAGT---------------AGGAGCGCA..................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCATGAA-TAAT------------------------------------------------------AAATGGGAG............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATCCACGCCTGATTCAGT-................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------------------------------------AAATGGGAGTGATGGAAAATCCACG............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGATGGAAAATCCAC.............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------------------------------------------------------AAATGGGAGTGATGGAAAA..................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................................................................................................................................................................................................................................................................................................................AAAAATGCTCTACTCAAACGT...................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTG------GTTGTGC---G------------------GGGG-GT............1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................GTGAGCACAGT---------------AGGAGCG....................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....AATTCGAACTTG----AGA------GCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................TGAAAGA-------------------------------------------------------------------GC----------------------------GAAATCAAGAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTTTT--GTAGTG------GTTGTG..........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGT-CGCAGGCT-TTCGTGTGCG.............................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGC---G------------------GGGG-GTATTTG--C....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........AACTTG----AGA------GCGTCGGTGTGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CGTTAATTCGAACTTG----AGA------G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.............................................................................................................................................................................................................................................................................................................................................................................................................AACAA-----TATTAAAG---------------------------------------------AGACAGATGC.....................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTTT--GTAGTG------GTTGTGC---G------------------GGG................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGAGTGATGGAAAAT.................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAGT-CGCAGGCT-TTCGT..................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.....................AGA------GCGTCGGTGTGCGTG----AG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT------------------------------------------------------AAATGGGAGTGATGGAA....................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........AACTTG----AGA------GCGTCGGTGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................GTCGGTGTGCGTG----AGAGCTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTG------GTTGTGC---G------------------GGGG-GTATTTG--CC...2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................................................................................................................................................GAAATCAAGAGAGAGGAAGAAACAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AA-----TATTAAAG---------------------------------------------AGACAGATGCA....................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTCAGT-CGCAGGCT-TTCGTG.................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAGT-CGCAGGCT-TTC....................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................GAAAGA-------------------------------------------------------------------GC----------------------------GAAATCAAGAGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAGT-CGCAGGCT-TG.....................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTTTT--GTAGTG------GTTGGT..........................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGCGTG--TGTCACCGG................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
droEre2
CCGTTAATTCGAACTTG----AGA------GCGTCGGTGTGCGTG----AGAGCTTAAAAGAGCG--CTTAAGAATAATATTGAAAGA-----------------------------------------GC----------------------------GAGATAAAGAGATAGGGAGAAACACGG-------------------------------------------CGCGGGCTAGTC-------------------------------------------------------------------------------------------CGACATGAAAAATGCTCTACAAAAACTGGAGCACAATAA---ATCTAG-CCCAGGGACGCAACAAAACAA-----TATTAAAG---------------------------------------------AGGCAAATGCATGAA-TAAT------------------------------------------------------AAATGGAAGTGATGGAAAATCCACGCCTTAATCATT-CGCAGTCT-TGCGTGTGCGTCTGGATCACCTTTT--GTAGTG------TTGGTGCA-AG------------------GGGG-GTG-TTG--CCCTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................GGTGTGCGTG----AGAGCTTAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
droYak3
CCGTTAATTCGAACTTG----AGA------GCGTCGGTGTGCGTG----AGAGCTTAAAAGAGCG--CTTAAGAATAAGATTAAAAGA-----------------------------------------GC----------------------------GAGAGAAAGAGAGAAGGAGAAACACAG-------------------------------------------CGCGGGTATGTC-------------------------------------------------------------------------------------------CGACTTGAATAATGCTCTACTGGAACTGGAGCACAGTAA---ATCTAA-CTCAGGGACGCATCAAAACAA-----TATTGATG---------------------------------------------AGGCAAATGCATGAA-TAAT------------------------------------------------------ATATGAGAGTGATAGAAAATACACGCCTGAATCAGA-CGCAGGCT-TGCGTGCGCGTCTGTGTCACATTTT--GTAGTG------TTGGTGCA-GGGGGGAGGTGGG-------GT-AGGTG-TTG--CCCTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................ATTAAAAGA-----------------------------------------GC----------------------------GAGAGAAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
droEug1
CCGTTAATTCGAACGAG----AGA------GCGTCGGTGTGCGTG----AGAGCTTAGAAGAGCG--CTTAA-------------------------------------------------------------GAATGGG--------------------AGAGTACGATAGAGAGGGAGTCAAAG-------------------------------------------CGGGGATATATC-------------------------------------------------------------------------------------------CGACTTATGGAATGCTCTACTATAACTCAAGCACTAATG---CCTGTT-CTCAGGGTCGGTTACTAAGAT-AC-AAGTTCAAG---------------------------------------------GGAGAACTGGATGAA-TAATTAAATTAATTTGATA---TTG------CGTTC---------------------------------CATGATAATCCGCTCCTGAATCATT-TACGGTAT-GGCGTGTGCGTGTGTGTCACCATTT--T-----------GTTGGTCA----------GGG--------GGAG-GGA-CTG--CCCTGSizeHit CountTotal NormTotal
No Reads
droBia1
CCGTTAATTCGAAATGG----CGA------GCGTCGGTGTGCGTG----AGAGCTTGGAATAG------------------------------------------------------------------------------------------------------------------TAGGCAAAG-------------------------------------------CTTGAGCATATC-------------------------------------------------------------------------------------------CGACCAGTGGAATGCCCTGCTGAAACTGGAGCACAGTTA---AATTGA-GGCAGGGGCGGATCAAAGGAA-AA-ACGT-T-----AAGG---------------------------------------GG-CGGCAGAGTGAA-TAGTTAAATAAA-------------------------------------------------------------AAAATCAACTCCTGAGTCAGT-CACGGGCT-TTCGAGTGCGTGTGTGTCACCTTGT--T-----------AGCGGGCA-AA-G-----GGG--------GGTG-GGG-TTGCGGCCTGSizeHit CountTotal NormTotal
No Reads
droTak1
CCGTTAATTCGAAATGG----GGA------GCGTCGGTGTGCGTG----AGAGCTTGGAATT----------------------------------------------------------------------------------------------------------AGAGAGGGAGA---------------------------------------------------GAGAGCATAGC-------------------------------------------------------------------------------------------CGACTACTGGAATGCTCTACTGGAACTGGAGCACAGTTA---TGTTAG-CACAGGGGCGGAGTAAG--GA-ATAAAGT-C-----AGGG---------------------------------------GG------GTATGAA-TAATAA------TATAATAA-----------------------------------------------------------TACTTCTGTATCACTCCGTTGTCT-TGCGTGTGCGTGTGTGTCACCTTCG--GTGGG-------T-----------------GGG--------GGTG-GGG-TTG--CCCTGSizeHit CountTotal NormTotal
No Reads
droEle1
CCGTTAATTCGAACGAG----AGA------GCGTCGGTGTGCGTG----AGAGCTTAAAAGTACG--CTTAA-------------------------------------------------------------GAGAGAG--------------------AGAGAGAGCGGGAGCGGTTAACAAAG-------------------------------------------CGTC-GCATATC-------------------------------------------------------------------------------------------CGACTAATGGAATGCTCTCCTGAAACTGGAGAACAGTTA---A-TCAG-TCCATATACAGATCTTGAGAA-AT-ATGT-C-----AAGG---------------------------------------GG------GTATGAA-TAATTTAATTATTTTAATGATATTTTTGTTTTGTT-GATATTA----TGTGT--------AGG---GACCCGAAAGATACCAGACTGAGTCAGT-CACTGGCT-TGCGTGTGCGTATATGTCGCCTTTT--GGGACG------G-----------------AGG--------GGGA-AGG-CTGC-CCCTGSizeHit CountTotal NormTotal
No Reads
droRho1
CCGTTAATTCGAACCAG----AGA------GCGTCGGTGTGCGTG----AGAGCTTGGAAGAACG--CTTAA-------------------------------------------------------------GATATAGAGAGAGAGAGTATGGTTAA-----------GAAGTGGTTGACAAAG-------------------------------------------CGCG-GCATATC-------------------------------------------------------------------------------------------CGACTAATGGATTGCTCTACTATAACTTGAACAAAGTAA---AATCAG-TCCAGGAGCAGATCTAGAGAA-AA-ATGT-T-----G-AG---------------------------------------GG------CTATAAA-TAATGAAATTCATTTAATAGTTTTTTTGT-------G------ATACTACATACATTTGTACGAGTATTATGAATAATGCGCGCCTAAATCAGC-CACAGACT-TGCGTGTGCGTGTAAGTCACCTTTT--GTGGAG------G-----------------AAG--------GGAA-GGG-CTG--CCCTGSizeHit CountTotal NormTotal
No Reads
droFic1
CCGTTAATTCGAACTAG----AGA------GCGTCGGTGTGCGTG----AGAGCTTGGAAGAGCG--CTTAA-------------------------------------------------------------GAAAGCG--------------------------TGATTGAGAGCGAAACAAAG-------------------------------------------CGCGGGCATATC-------------------------------------------------------------------------------------------CGACTAATGGCATTCACTACTGGAACTGAAACACAGTTA---TATTGATTTAAGAGGCGTATTTGAAGAAGAA-ATGT-T-----TAAG---------------------------------------GG------GTTTGAA-TAATTAAATTCATTTAATGATTTTT------TGTTGG------ATGTTACGT-------------------CGGGTATCTGCGGCTGAATCAGA-AACAAACT-TGCGTGTGCGTGTGTGTCACCCTTT--GTTGTT------T-----------------GGG--------GAGG-GGG-CTG--CTTTGSizeHit CountTotal NormTotal
No Reads
droKik1
CCGTTAATTTGAAAGAGCGAGAGA------GCGCCGCTAAG---GCGAGCGAGATAGAGCGA--G--CG------TAAGCTTGTTGGA-----------------------------------------GC------GCGCGAGAGAGCGGCTGAGTCG-----------GCGGTGGTTGACAAAG-------------------------------------------A-----------------------------------------------------------------------------------------GGGCGAGTCTATACGACTGCTGGAATGCTCTACCT-----GGGGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTAAATCACT-CACAGGCT-TGCGT------GTGTGTCACCCTCT--TAGGAG------AGGGAGC---A------------------GGG--GCATCTG--CCC--SizeHit CountTotal NormTotal
No Reads
droAna3
CCGTTAATTCGAACGGG----AGA------GCCGCAGCGTCGGTG----TTTGTTCGAGAGA-------------------------------------------------------------------GC----------------------------TTACGAAAGAGCGACAAAAAAAAAAACCAGTGGCGCTGT----------TGTTTCCCAAGGGGGT--------------TGATCCCTGGTAGGTAGTTAGGTAGAAGGTTTGAATGGAAATCCATTCCTCCACTGGCCCT---CCCGTGATTGACAAAGACCTCGGATTAGGCAGACTA-----------------------------------------------------------------------C-----TGG-A---------------------------------------------------------------------------------------------------------------------GGC--------GGAGTCCTCTACCTAAGCCAGT-CACCAGT----GATGTGCGTGTGTGTCATGCTCG--CCGGG-------T-----------------GAT------GAATGC-GTATTGC--GCGCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....AATTCGAACGGG----AGA------GCCGCAGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
droBip1
CCGTTAATTCGAACGGG----AGAGGCGCAGCGTCGGTGTTTGTA----TG---CCGAGAGA-------------------------------------------------------------------GC-----------------------------TATGAAAGAGCGACA-AGAAACAG-----TGGCGCTGTGATGTTTTGTTGTTATTTCAGGGGGT--------------TGATGCCTGGTAGGTAGGTAG---GAATGCTTGAATGGAAATCCTTCCCTTT-----CCCTGGGCCCGTGATTGACAAAGAACTCGGATTAGGCAGACTA-----------------------------------------------------------------------C-----TGG-A-----------------------------------------------------------------------------------------------------------------------------------GGCCCTTACCTAAATCAGT-CACCGATG-TGCGT------GTGTGTCATGCTCGTTGTCGTT------GGGGGGCAGGAGAAGCGGTAGGGTGATGAATAC-ATATTGC--GCGCGSizeHit CountTotal NormTotal
No Reads
dp5
CCGTTAATTCGAATGCG--GCTGC------GCGTCAGTGAGTG--------------TTGGTGTGTCTCTGTGTGTGTGTTTGTTTGC-----------------------------------------GTGAAAAAGGG----------------------------AGAGTGAGAGAGACG---------CGCTTTGAC------------------GAGGTCATAGC----CGATAGC-------------------------------------------------------------------------------------------CGACTTGTGGAATGCTCTACTCTA-CTGAAACGTCATAGATAACGTA-AGGAAGTCCCGTCGTAGAGGAGGCC-ATTC-----TCG-AGGACTCTGCCTTACCTTATATCCAATATACTTTGACGTTGACGCAAA--CAGGAGCTTGC------------------------------------------------------GTGTGGAAGGGCTGATATACATATGCCTGATTTATG-CCCT-----------------------------------------GTTGGTGTAC---T------------------GGA-------AA--CCCTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................G--GCTGC------GCGTCAGTGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GCC-ATTC-----TCG-AGGACTCTGC..............................................................................................................................................................................................................................................2020.5010100000000
...........................................................................................................................................................................................................................................................................................................................................................TCTACTCTA-CTGAAACGTCAT..........................................................................................................................................................................................................................................................................................................2120.5010100000000
.....................TGC------GCGTCAGTGAGTG--------------TTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010100000000
.....................................................................................................................................................................................................................................C----CGATAGC-------------------------------------------------------------------------------------------CGACTTGTGGAAT..................................................................................................................................................................................................................................................................................................................................2120.5010100000000
...TTAATTCGAATGCG--GCTGC------G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000001000
droPer2
CCGTTAATTCGAATGCG----GCTGC----GCGTCAGTGAGT--------------GTTGGTGTG--TCTGTGTTTGTGTTTGTTTGC-----------------------------------------GTGAGAAAGGG----------------------------AGAGTGAGAGAGACG---------CGCTTTGAC------------------GGGGTCATAGC----CGATAGC-------------------------------------------------------------------------------------------CGACTTGTGGAATGCTCTACTCTA-CTGAAACGTCATAGATAACGTA-AGGAAGTCCCGTCGTAGAGGAGGCC-ATTC-----TCG-AGGACTCTGCCTTACCTTATATCCAATATAGTTTGACGTTGACGCAAA--CAGGAGCTTGC------------------------------------------------------GTGTGGAAGGGATGATATACATATGCCTGATTTATG-CCCT-----------------------------------------GTTGGTGTAC---T------------------GGA-------AA--CCCTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTTTGACGTTGACGC...........................................................................................................................................................................................................1812.002200000
...................................................................................................................................................................................................................................................................................................................................................................................................................CC-ATTC-----TCG-AGGACTCTGCCT............................................................................................................................................................................................................................................2121.002200000
...........................................................................TGTGTTTGTTTGC-----------------------------------------GTGAGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
....................................................................CTGTGTTTGTGTTTGTTTGC-----------------------------------------G.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCTTGC------------------------------------------------------GTGTGGAAGG...........................................................................................................................2020.501000001
......................................................................................................................................................................................................................................................................................................................................................................................................................ATTC-----TCG-AGGACTCTGCCTTACCTT......................................................................................................................................................................................................................................2520.501100000
...................................................................................................................................................................................................................................................................................................................................................................................................................CC-ATTC-----TCG-AGGACTCTGCCG............................................................................................................................................................................................................................................2120.501100000
droVir3
CCGTTAATTCGAAAAAG----CGA------G----GGAGTGCAGA----------------AGCG-----------------------TCACTCACACGCTCTCTCGGTGAGAGCGAAGAGCGAATCGA------------------------------GCTAGAAAGAGAAAGAT------------------CTAAAAA------------------AAGGTTAAATG----ATATTAA-------------------------------------------------------------------------------------------CGACCGGT-AAATACTCTACTCTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTACTATAATT-GGCAAACTGTGCGTGTTTCTATGGACTTGCTTCT--TTATTAAGGGTTGGA--------------------------GT-ACCTA-TTT--ACATGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................AGCG-----------------------TCACTCACACGCTCTCTCGGTGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000001000
droMoj3
CCGTTAATTCGAAATCG----CGA------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CCGTTAATTCGAAAC-G----CGA------GCGA--------GTG----AGAGCGTA----CGTC-----------------------TCACTCATACAC----TCAACAAGAATAGAGAGC-------------------------------------GAGTGAGTGAGTGAGTGAGAAGCAAAA-------------------------------------------CGCCGACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 10:13 AM