ID:

dsi_23337

 Coordinate:

x:1133610-1133759 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.7 -13.7 -13.6

Flybase annnotation

three_prime_UTR [x_1133211_1134181_-]; exon [x_1133211_1134341_-]

No Repeatable elements found

Sense Strand Reads

##########################################################################################################################################################################################################################################################
ACTAGTTATTAAAACGTTCGGAGGTCAGTCAAATCAGATCACATTTCAGTTGCGGAGGCTCCTTCCTGACCACAGCTGTCCAGTCCGGCGTTTACCACCGTGTCCATCCACGCCCTGCCCACACGCACACACCCATCCATCAGATAACACTCACACAGTAACTCAGAGCACTTTCTAATTATTAATTCTAATTTCTTAAGCTTCGCATTCTTTCGATGTGTTCCTTGCTCTCGTAGTTCTTCAACGATTA
********************************************************.((((...((.(((.((....))...))).))..........((((......))))...(((......)))......................................)))).........************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR902009
testis
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
..................................................................TGAACACAGCTATCCAGT...................................................................................................................................................................... 18 2 3 14.00 42 40 2 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................CACACAGTAACTCAGAGCACTTTCTAA........................................................................ 27 0 1 3.00 3 0 0 0 3 0 0 0 0 0 0 0 0
......................................................................................................................................................TCACACAGTAACTCAGAGC................................................................................. 19 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................CACACAGTAACTCAGAGC................................................................................. 18 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0
.............................CAAATCAGATCACATTTCAGTTCGGA................................................................................................................................................................................................... 26 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................GGCTCCTTCCTGACCACAGCT............................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................GATCACATTTCAGTTGCG.................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...............GTTCGGAGGTCAGTCAAATCAGATCAC................................................................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CTCACACAGTAACTCAGAGCACT.............................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......TATTAAAACGTTCGGAGGTC................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................ACAGTAACTCAGAGCACTTTCT.......................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................CACACAGTAACTCAGAGCACTTTCTAAT....................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...AGTTATTAAAACGTTCGGAGGTCAGT............................................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.......ATTAAAACGTTCGGAGGTCAGTC............................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................TTGCGGAGGCTCCTTCCTG...................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.........TAAAACGTTCGGAGGTTAA.............................................................................................................................................................................................................................. 19 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
........TTAAAACGTTCGGAGGTCAGTCGAA......................................................................................................................................................................................................................... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.......ATTAAAACGTTCGGAGGTCAGTCAAAT........................................................................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................AAATCAGATCACATTTCAGT........................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CACAGTAACTCAGAGCAC............................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......ATTAAAACGTTCGGAGGT................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
....GTTATTAAAACGTTCGGAGGTCAGT............................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................CACACAGTAACTCAGAGCACTTTCTA......................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................CAAATCAGAACACATTTCAGTTGCGGA.................................................................................................................................................................................................. 27 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
ACTAGTTATTAAAACGTTCGGAGGTC................................................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................TCAGATCACATTTCAGTTGCGGA.................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
................................................................CCTGACCACAGCTGTCC......................................................................................................................................................................... 17 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..............................GAATCAGATCACATTTCAGTTGCGGAGGC............................................................................................................................................................................................... 29 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TCTTTCGATGTGTTCCTTGCTCTCG................. 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..........................AGTCAAATCAGATCACATTTCAGTTGCGG................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..........AAAACGTTCGGAGGTCAGTCAAATCAGA.................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................CACTCACACAGTAACTCAGA................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.....TTATTAAAACGTTCGGAGGTCAG.............................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.........TAAAACGTTCGTAGGT................................................................................................................................................................................................................................. 16 1 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................TGAACACAGCTGGCCAGT...................................................................................................................................................................... 18 2 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................TGATCAGTCAAATCAGAT................................................................................................................................................................................................................... 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1 0
...............................................................................................CACCGTGTCCATCCGG........................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TGATCAATAATTTTGCAAGCCTCCAGTCAGTTTAGTCTAGTGTAAAGTCAACGCCTCCGAGGAAGGACTGGTGTCGACAGGTCAGGCCGCAAATGGTGGCACAGGTAGGTGCGGGACGGGTGTGCGTGTGTGGGTAGGTAGTCTATTGTGAGTGTGTCATTGAGTCTCGTGAAAGATTAATAATTAAGATTAAAGAATTCGAAGCGTAAGAAAGCTACACAAGGAACGAGAGCATCAAGAAGTTGCTAAT
************************************************************************.((((...((.(((.((....))...))).))..........((((......))))...(((......)))......................................)))).........******************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
.....................................................................................................................................................AAGTGTGTCATTGAGTCTCGTG............................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0
..................................................................................................................................................TGTGAGTGTGTCAGGGAGTCT................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0
..................................................................................................................................TGGGTAGGTAGTCCCTTGT..................................................................................................... 19 2 1 1.00 1 0 1 0 0 0 0 0 0
..................GCCTCCGGTCAGGTTAGTC..................................................................................................................................................................................................................... 19 2 2 0.50 1 0 0 0 1 0 0 0 0
............................................................TGAAGGATTGGAGTCGACAG.......................................................................................................................................................................... 20 3 3 0.33 1 0 0 0 0 1 0 0 0
......................................................................GTGTCGTCAGGTCAGGTCGTA............................................................................................................................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGAAGGGTAAGAAAGCTCCA............................... 20 3 4 0.25 1 0 0 0 0 0 0 1 0
..........................................................................................................................................................................................AGATACAAGAAGTCGAAGCGT........................................... 21 3 6 0.17 1 0 0 0 0 0 1 0 0
...................................................CGCCTGGGAGTAAGGACTG.................................................................................................................................................................................... 19 3 7 0.14 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................TTCTCGTGATAGATTAAT..................................................................... 18 2 9 0.11 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................TCAAGAAGTCGAAGCGAAAGA....................................... 21 3 10 0.10 1 0 0 0 0 0 1 0 0
....................CTCCAATCAGGTTAGGCTA................................................................................................................................................................................................................... 19 3 14 0.07 1 0 0 0 0 0 0 0 1
............................................................................................................................................................................................................................AAGGAATTAGAGCATCATG........... 19 3 19 0.05 1 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:1133560-1133809 - dsi_23337 ACT----AGTTATTAAAACGTTCGGAGGTCAGTC--------------------------------------------------AAATCAGATCACAT-TTCAGTTGCGGAGGCTC-CTTCCTGACCACAGCTGTCCAGTC-------CGGCGTTTACCACCG------------TGTCCA-----------------------------TCCACGC-C-CTGCCC--ACACGCACACACCCATCCATCAGATAACACT-CA--C--------------------------A-----C----AGTAACTCAGAGCACT------TT----------------------CT-AATTA----TTAATTCTA-------AT-TTCTTAAGCTTC-GCATTCTTTCGATGTGTTCCTTGCTCTCGTAGT-------------TCT-TCAA---CGATTA
droSec2 scaffold_10:1077370-1077619 - ACT----AGTTATTAAAACGTTCAGAGGTCAGTC--------------------------------------------------AAATCAGATCACAT-TTCAGTTGCGGAGGCTC-CTTCCTGACCACAGCTGTCCAGTC-------CGGCGTTTACCACCG------------TGTCCA-----------------------------TCCACGC-C-CCGCCC--ACACGCACACACCCATCCATCAGAGAACACT-CA--C--------------------------A-----C----AGTAACTCAGAGCACT------TT----------------------CT-AATTA----TTAATTCTA-------AT-TTCTTAAGCTTC-GCATTCTTTCGATGTGTTCCTTGCTCTCGTAGT-------------TCT-TCAA---CGATTA
dm3 chrX:1244271-1244534 - ACT----AGTTGTTAAAACGTTCGGAGGTCAGCC--------------------------------------------------AAATCAGAGCACAT-TTCAGTTGCGGAGGCTC-CATTCTGACCACAGCTGTCCAGTC-------CAGCGTTTACCACCG------------TGTCCA-------------------TCCCCGT--GTCCACGC-C-TCGCCC--ACACGCACACACCCAACT-TCAGAGGACACT-CA--C--------------------------A-----C----AACAACTCAGAGCACT------TT----------------------CT-AATTA----TTAATTCTAATGTATTAA-TTCTTAAGCTTC-GCATTCTTTCGATGTGTTCCTTGCTCTCGTAGT-------------TCT-TCAA---CGATTA
droEre2 scaffold_4644:1236812-1237055 - GCT----AGATAT--AAACTTTCGGAGGTCAGTC--------------------------------------------------AAATCAAATTATAC-TACAGTTGTGGAGTCTC-CGTTTTGACCACAGCTGCCTAGTC-------CGGCGTTTACCACCG------------TGTCCA-----------------------------TCCACGC-C-CCGCCC--ACACGCACACACAC--TCATCAGAGAACACT-CA--C--------------------------A-----C----AACAACTCAGAGCATT------TT----------------------CT-AATTA----TTAATTGT----------ATTCTTAAGCTTC-GCATTCTTTCGATGTGTTCCTTGCTCGCATAGT-------------TCT-TCAA---CGATTA
droYak3 X:1161757-1162002 - GCT----AGTTAT--AAACTTTCGGAGGTCAGTC--------------------------------------------------AAATCAAATCGTCC-TACAGTTGTGGAGACTC-CATTTTGACCACAGCTGCCTAGTC-------CGGCGTTTACCACCG------------TGTCCA-----------------------------TCCACGC-C-CCGCCC--ACACGCACACACACACCCATCAGAGAACACT-CA--C--------------------------A-----C----AACAACTCAGAGCATT------TT----------------------CT-AATTA----TTAATTGT----------ATTCTTAAGCTTC-GCATTCTTTCGATGTGTTCCTTGCTCGCGTAGT-------------TCT-TTAA---CGATTA
droEug1 scf7180000408973:113262-113488 + GGT----AATTAT--CACATTTTGAAAGT---------------------------ATTATTAGAGCTGTAAATTATAAATATCAAATCGAGTTA---------TTTTGGCGACTTTTCTTGCGACCAAAATCGCTTAATC-------CAGTGCTTACCATCG------------C-G------------------------------------------CCGCCC--ACACGCACACACCC-----------TTCATTGCACAT--------------------------G-----C----AAAAGCTCAGAGCATT------T---------------------AACT-AATTAT---TTAATTGT----------AATATTAGGTTTT-GCA-----------------GTGCTTGCGTAGT-------------TCT-TTTA---TAATTA
droBia1 scf7180000301760:5004450-5004730 - ACATTTTATTTATTGGATCGCT--GAGTTTCTT--GGCCTTTCCAAGCTATTCCGCATTATTAGAGCTGTAAACCACAAAGATCAAATC-----AAAGTTAAAGTTTTGGAGGCTTTTGTTCTGACCGAAGTTGCTTAGTC-------CGTCGTTTACCACCG------------C-CCCA-----------------------------AACACGC-C--CGCCC--ACACACAC----T-GCA---C--------------AC-------------ACAGCAA------------G----AAGAGCTCAGAGCATT------T---------------------TACT-AATTAT---TTAATTAT----------AATCTTAAGT-TC-GCCTGCTTTCGATGTGTTCCTTGCTCGCGTAGT-------------TCT-TGAA---TGATCA
droTak1 scf7180000415289:432015-432280 - GGT----AATTAT--CAACTTTTGCAAATCAATTA----ATTGTAAATTATTCCGTATTGTTAGA-----------------TCAAAAA-----AAAGTTATGGATGTGGAGGCTTTTATTTTT--------------------------GTAC-CACAGCCG------------C-CCCC-C--------------------------GACCACGC-CCCTGCCC--ACACGCACACACCC-----------ATCACTGCACACACAGAGAAAACAGAAAACAA-C----A-----A---CAAGAGCTCAGAGCATT------T---------------------TACT-AATTATTTTTTAATTGT----------AATTTTAAGTTTG-GCATGCTTTCGATGTGTTCCTTT-------AAT-------------GAT-TTAA---TGATTA
droEle1 scf7180000490996:71875-72048 - AGT------------------------------------------------------------------------------------------------------TGTCA-GGCTTTTATTTTGACCGCAGTTGTTCAGTC-------CGGTATTTAACACCA------------G-CCCA-----------------------------CCCACTCCC-TCG-CA--GCACACCCACTCCC-----------AACACCGCA--C--------------------------A-----C-----------------------------------------------------AACTAT---TTAATTGT----------AATCTTAAGTTTC-GCATACGTTCGATGTGATCCTTGCTCGCGTAGT-------------TCT-TTAAAACCGATTT
droRho1 scf7180000778087:62335-62503 - A---------------------------------------------------------------------------------------------------------------------------------GTTGTTCAGTC-------CGGTAC-TAACACCG------------C-CCTA-----------------------------CCCACTTCC-CCGCCC--ACACGCACATACCC-----------AACACCACA--C--------------------------A-----C----AACAGCTCAAAGCATT------T---------------------TACT-AATTAT---TTAATTGT----------AATCTTAAGTTTC-GCATGCTTTCGATGTGTTCCTTGATCGCGGAGT-------------TCT-GTAAAACCTATTA
droFic1 scf7180000454072:1860849-1861062 + ACC----TATTATTAGAGCTTT---------------------------------------------------------------AATC-----AAATTTATAATTGAGGGTGCTTTCATTTTGACCGTAGCTCTTATTTC-------CTGCATTTACCACCG------------C-CACA-----------------------------CCCACTAAC-CCGCTC--AC--------GCC-GCA---G------------A--C--------------------------A-----C----AACAGCTCAGAGCATT------T---------------------TACT-AATTAT---TTAAATTT----------AATCGTAAGATTC-GCATGCTTTCGATGTGTTCCTTTCTCGCGTAGT-------------TCT-TAAAATACGACTA
droKik1 scf7180000302610:1069038-1069197 + AC----------------------------------------------------------------------------------------------------------------------------CGCAGTTGCTT-GTCCAAGTTCCGGCATTTACCACCG------------C-CCCC-C--------------------------GTC---------CGCCT--ACACTTACACACACACA---CACACAACACC-TA--C---------------C------GCACAACCTAGCAC-AGC-------AGCAGC------T---------------------CACGTATCTAT--TTTAACTTT----------AAC----------------------TTGGGTTCTTTGCTTGTGTTGT-------------TCC-TT---------TT
droAna3 scaffold_13117:1870671-1870793 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACGCACACACC-GCA---C-------AC---A--A--------------------------A----------CACAGCTCAGAGCAAA------C---------------------TACT-ACCTATGTTTAATTTGT----------AATCCAATGTTTT-TGCTGCTTTTAATGTGTTCCTTGTTCGCGGAGAGAAAG--------AGT-TCAA---AAGCTA
droBip1 scf7180000396425:191489-191611 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACGCACACACC-GCA---C---------C-CA--A--------------------------A----------CACAGCTCAGAGCAAA------C---------------------TACT-ACCTATGTTTTATTTTT----------AATCCAATGTTTT-TGCTGCTTTTAATGTGTTCCTTGTTCGCGTAGAGAAAG--------AGT-TCAA---AAGCTG
dp5 XL_group1a:4803946-4804146 + TGT------------------------------------------------------------------------------------------------------------------------------------TTAGTCCAGGCACAGGCATTTACAACCCAAGATTCTCCTTTGTCCTCCCACAAGCAGCATACTGGCACCCGCACAC---------ACA-TACCACA-------------------------------CACACGCACAGCGCCCAAAATGA------------G----AACAGCTCAGAGCAGTCCTTTTTT----------------------TT-AATTA----ATAATAAT----------TATCTTAAGTTTTGGCACGCTTTTAATGTGTTCCTTGTTCGAGTAGT-------------T---------------A
droPer2 scaffold_11:1391818-1392023 + TGT------------------------------------------------------------------------------------------------------------------------------------TTAGTCCAGGCACAGGCATTTACAACCCAAGATTCCCCTTTGTCCTCCCACAAGCAGCATACTGGCACCCGCACAC---------ACA-TACCACA-------------------------------CACACGCACAGCGCCCAAAATGA------------G----AACAGCTCAGAGCAGTCCTTTTTT----------------------TA-AATTA----ATAATAAT---TAAA-T-TATCTTAAGTTTTGGCACGCTTTTAATGTGTTCCTTGTTCGCGTAGT-------------T---------------A
droWil2 scf2_1100000004590:1414887-1414917 + ATA----GGTTCC--CAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTCGTTTT-------------TGT-TCAG---T----T
droVir3 scaffold_12970:4188739-4188824 + C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-AATTATTTAATAA-TGTA-------AG-TTGAAGAATTTA-ACCTGCTTTTAATATGTTCCTTTCTTGTGTAAAGTCTTTTTGC-------TATT---TTGCCA
droMoj3 scaffold_6473:7154295-7154473 + CGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-CTTCCC--ACACACACACACACACAC-TCAAAGACCG----------------------AACCCAGCGCACA-----T----TGC-------AGCTTT------AGCTAAATTAAAATTACTTGTGTACT-AATTATTTATTAATTGTA-------AG-TTCAAGAATTTA-ATCTGCTTTTAATATGTTCCTTTCTTGTGTAAAGTCGTTTTGCTGATTTCCTAT---TGTTTA
droGri2 scaffold_15203:9759399-9759545 - CCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAC--ACACGCATACACACTCGC-TCAGAAACCG----------------------AACCCAGCACACA-----T----TAC-------AGCTTT------AGCTAAATTAAAAT--------TACT-AATAA---------TCTA-------AG-TTCATGA------------AATTAACCTGTTCCTTTCTTGTGTAAAGTCTTTTTGCAATTTT-TTTT---TTGCTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACT----AGTTATTAAAACGTTCGGAGGTCAGTC--------------------------------------------------AAATCAGATCACAT-TTCAGTTGCGGAGGCTC-CTTCCTGACCACAGCTGTCCAGTC-------CGGCGTTTACCACCG------------TGTCCA-----------------------------TCCACGC-C-CTGCCC--ACACGCACACACCCATCCATCAGATAACACT-CA--C--------------------------A-----C----AGTAACTCAGAGCACT------TT----------------------CT-AATTA----TTAATTCTA-------AT-TTCTTAAGCTTC-GCATTCTTTCGATGTGTTCCTTGCTCTCGTAGT-------------TCT-TCAA---CGATTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................CA--C--------------------------A-----C----AGTAACTCAGAGCACT------TT----------------------CT-AA......................................................................................................2713.00300000030000000000
..................................................................................................................................................................................................................................................................T-CA--C--------------------------A-----C----AGTAACTCAGAGC............................................................................................................................................1913.00303000000000000000
....................................................................................................................................................................................................................................................................CA--C--------------------------A-----C----AGTAACTCAGAGC............................................................................................................................................1812.00201100000000000000
...............................................................................................................GGCTC-CTTCCTGACCACAGCT..................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
..........................................................................................GATCACAT-TTCAGTTGCG..........................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
...................GTTCGGAGGTCAGTC--------------------------------------------------AAATCAGATCAC.......................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
.................................................................................................................................................................................................................................................................CT-CA--C--------------------------A-----C----AGTAACTCAGAGCACT------...................................................................................................................................2311.00101000000000000000
..........TATTAAAACGTTCGGAGGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
...................................................................................................................................................................................................................................................................................................A-----C----AGTAACTCAGAGCACT------TT----------------------CT-........................................................................................................2211.00101000000000000000
....................................................................................................................................................................................................................................................................CA--C--------------------------A-----C----AGTAACTCAGAGCACT------TT----------------------CT-AAT.....................................................................................................2811.00100000010000000000
.......AGTTATTAAAACGTTCGGAGGTCAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
...........ATTAAAACGTTCGGAGGTCAGTC--------------------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
........................................................................................................TTGCGGAGGCTC-CTTCCTG...........................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
...........ATTAAAACGTTCGGAGGTCAGTC--------------------------------------------------AAAT...............................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
....................................................................................AAATCAGATCACAT-TTCAGT..............................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
........................................................................................................................................................................................................................................................................C--------------------------A-----C----AGTAACTCAGAGCAC..........................................................................................................................................1811.00110000000000000000
...........ATTAAAACGTTCGGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
........GTTATTAAAACGTTCGGAGGTCAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
....................................................................................................................................................................................................................................................................CA--C--------------------------A-----C----AGTAACTCAGAGCACT------TT----------------------CT-A.......................................................................................................2611.00100100000000000000
ACT----AGTTATTAAAACGTTCGGAGGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
.......................................................................................TCAGATCACAT-TTCAGTTGCGGA........................................................................................................................................................................................................................................................................................................................................................2311.00100000001000000000
........................................................................................................................CCTGACCACAGCTGTCC..............................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCGATGTGTTCCTTGCTCTCG..................................2511.00100000000001000000
..............................AGTC--------------------------------------------------AAATCAGATCACAT-TTCAGTTGCGG.........................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
..............AAAACGTTCGGAGGTCAGTC--------------------------------------------------AAATCAGA...........................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
...............................................................................................................................................................................................................................................................CACT-CA--C--------------------------A-----C----AGTAACTCAGA..............................................................................................................................................2011.00100010000000000000
.........TTATTAAAACGTTCGGAGGTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000010000
..............................................................................................................................................................CACCG------------TGTCCA-----------------------------TCCGG................................................................................................................................................................................................................................................16200.05100000000010000000
droSec2
ACT----AGTTATTAAAACGTTCAGAGGTCAGTC--------------------------------------------------AAATCAGATCACAT-TTCAGTTGCGGAGGCTC-CTTCCTGACCACAGCTGTCCAGTC-------CGGCGTTTACCACCG------------TGTCCA-----------------------------TCCACGC-C-CCGCCC--ACACGCACACACCCATCCATCAGAGAACACT-CA--C--------------------------A-----C----AGTAACTCAGAGCACT------TT----------------------CT-AATTA----TTAATTCTA-------AT-TTCTTAAGCTTC-GCATTCTTTCGATGTGTTCCTTGCTCTCGTAGT-------------TCT-TCAA---CGATTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........TATTAAAACGTTCAGAGGTCA........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0021010
..............................................................................................................AGGCTC-CTTCCTGACCACAGCTGTCCA.............................................................................................................................................................................................................................................................................................................................2711.0010010
.....................TCAGAGGTCAGTC--------------------------------------------------AAATCAGAT..........................................................................................................................................................................................................................................................................................................................................................................2211.0010100
..................CGTTCAGAGGTCAGTC--------------------------------------------------AAATC..............................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.........................................................................................................TGCGGAGGCTC-CTTCCTGACCACAGCT..................................................................................................................................................................................................................................................................................................................................2711.0010010
..........................................................................................................................................................................................................................C-CCGCCC--ACACGCACACACCC.....................................................................................................................................................................................................................2111.0011000
..........................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTTCGATGTGTTCCT..........................................1911.0010010
.........................................................................................................TGCGGAGGCTC-CTTCCTGACCACA.....................................................................................................................................................................................................................................................................................................................................2411.0011000
...................GTTCAGAGGTCAGTC--------------------------------------------------AAATCAGATCA........................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.............................................................................................................................CCACAGCTGTCCAGTC-------CGGC...............................................................................................................................................................................................................................................................................................................2011.0011000
.....................................................................................AATCAGATCACAT-TTCAGTTGCGGA........................................................................................................................................................................................................................................................................................................................................................2511.0010100
.............................................................................................................................................................................................................................................................................................................................................................................................CTTAAGCTTC-GCATTCTTTCG....................................................2111.0010010
........................................................................................CAGATCACAT-TTCAGTTGCGGA........................................................................................................................................................................................................................................................................................................................................................2211.0010100
dm3
ACT----AGTTGTTAAAACGTTCGGAGGTCAGCC--------------------------------------------------AAATCAGAGCACAT-TTCAGTTGCGGAGGCTC-CATTCTGACCACAGCTGTCCAGTC-------CAGCGTTTACCACCG------------TGTCCA-------------------TCCCCGT--GTCCACGC-C-TCGCCC--ACACGCACACACCCAACT-TCAGAGGACACT-CA--C--------------------------A-----C----AACAACTCAGAGCACT------TT----------------------CT-AATTA----TTAATTCTAATGTATTAA-TTCTTAAGCTTC-GCATTCTTTCGATGTGTTCCTTGCTCTCGTAGT-------------TCT-TCAA---CGATTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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...............AAACGTTCGGAGGTCAGCC--------------------------------------------------AAATCAGA...........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................CT-CA--C--------------------------A-----C----AACAACTCAGAG.............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GTCAGCC--------------------------------------------------AAATCAGAGCACAT-TTCAG...............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................ACACACCCAACT-TCAGAGGACA......................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................TCAGAGGACACT-CA--C--------------------------A-----C----AACAACTCAGA..............................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTTCGATGTGTTCCTTGC.......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................A-----C----AACAACTCAGAGCAC..........................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................C--ACACGCACACACCCAACT-TCAGAGGA........................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCGATGTGTTCCTTGCTCTCGT.................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................AACAACTCAGAGCACT------TT----------------------CT-AATT....................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................AGCC--------------------------------------------------AAATCAGAGCACAT-TTCAGT..............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................TCAGTTGCGGAGGCTC-CATTCTGAC.........................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................CACACCCAACT-TCAGAGGACA......................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TA----TTAATTCTAATGTATTAA-TTCTTAAGC...................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................T-CA--C--------------------------A-----C----AACAACTCAGAGCACT------TT----------------------CT-AAT.....................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................CAACT-TCAGAGGACACT-CA--C--------------------------A-----C----AACA.....................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TTCAGTTGCGGAGGCTC-CATTCTGACCA.......................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................CACACCCAACT-TCAGAGGACACT-CA--...............................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................C--------------------------A-----C----AACAACTCAGAGCACT------TT----------------------CT-AATT....................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................AGAGGACACT-CA--C--------------------------A-----C----AACAAC...................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................CATTCTGACCACAGCTGTC...............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TTCTGACCACAGCTGTCCAGTC-------C..................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTGCTCTCGTAGT-------------TCT-TCAA---CGA...2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AACGTTCGGAGGTCAGCC--------------------------------------------------AAAT...............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................CCA-------------------TCCCCGT--GTCCACGC-C-TCGC.......................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..T----AGTTGTTAAAACGTTCGGAGGTCAGCC--------------------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................AT-TTCAGTTGCGGAGGCTC-C.................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................TCCAGTC-------CAGCGTTTACCACCG------------TGTCC...................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................T-CA--C--------------------------A-----C----AACAACTCAGAGCACT------TT----------------------...........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................................................................AATCAGAGCACAT-TTCAGT..............................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TGTATTAA-TTCTTAAGCTTC-GCATTCT........................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................GAGGACACT-CA--C--------------------------A-----C----AACAACTCAGAGC............................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TCTAATGTATTAA-TTCTTAAGCTTC-...............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................ACCACAGCTGTCCAGTC-------CAGCGTTT...........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................GCGGAGGCTC-CATTCTGACCA.......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AGTTGTTAAAACGTTCGGAGGTCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................................................................................ACT------TT----------------------CT-AATTA----TTAATTCTAATGT..................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................TCAGAGGACACT-CA--C--------------------------A-----C----AACAACT..................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AAACGTTCGGAGGTCAGCC--------------------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................TTCGGAGGTCAGCC--------------------------------------------------AAATCAGAGCA........................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................CTCAGAGCACT------TT----------------------CT-AATTA----TT.............................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
............................................................................................................................................................................................................................................................................................................................................................CT-AATTA----TTAATTCTAATGTATTAA-TTCTT.......................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TCGATGTGTTCCTTGCTCTCGTAGT-------------.................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................T-CA--C--------------------------A-----C----AACAACTCAGAGCACT------TT----------------------CT-A.......................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................GGAGGTCAGCC--------------------------------------------------AAATCAGAGCAC.......................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................ACCACCG------------TGTCCA-------------------TCCCC..........................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TA----TTAATTCTAATGTATTAA-TTCTTAAG....................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TTTACCACCG------------TGTCCA-------------------TCCCCGT--G.....................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TTCAGTTGCGGAGGCTC-CATTCTGACC........................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GTTAAAACGTTCGGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................CCA-------------------TCCCCGT--GTCCACGC-C-TCGCC......................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TCAGAGCACT------TT----------------------CT-AATG....................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GCT----AGATAT--AAACTTTCGGAGGTCAGTC--------------------------------------------------AAATCAAATTATAC-TACAGTTGTGGAGTCTC-CGTTTTGACCACAGCTGCCTAGTC-------CGGCGTTTACCACCG------------TGTCCA-----------------------------TCCACGC-C-CCGCCC--ACACGCACACACAC--TCATCAGAGAACACT-CA--C--------------------------A-----C----AACAACTCAGAGCATT------TT----------------------CT-AATTA----TTAATTGT----------ATTCTTAAGCTTC-GCATTCTTTCGATGTGTTCCTTGCTCGCATAGT-------------TCT-TCAA---CGATTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTGCTCGCATAGT-------------TCT-TCAA---CGAT..2712.0022000000
.............................................................................................................................................................................................................................................................................................................................................................................TGT----------ATTCTTAAGCTTC-GCATTCTTT......................................................2511.0011000000
............................................................................................................................................................ACCACCG------------TGTCCA-----------------------------TCCACGC-C-CCGCC......................................................................................................................................................................................................................................2611.0011000000
...........................................................................................................................................................TACCACCG------------TGTCCA-----------------------------TCCACGC-C-CCGC.......................................................................................................................................................................................................................................2611.0011000000
...................................................................................................................................................................................................................CCACGC-C-CCGCCC--ACACGCACACA........................................................................................................................................................................................................................2411.0011000000
...........AT--AAACTTTCGGAGGTCAGTC--------------------------------------------------AAATC..............................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
................................................................................................................................................................................GTCCA-----------------------------TCCACGC-C-CCGCCC--AC.................................................................................................................................................................................................................................2111.0011000000
............................................................................................................................................................................................................................................................GAACACT-CA--C--------------------------A-----C----AACAACTCAGAGC............................................................................................................................................2511.0010100000
.................................................................................................................................................................................................................................................................CT-CA--C--------------------------A-----C----AACAACTCAGAGCATT------TT----------------------CT-........................................................................................................2711.0010100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATAGT-------------TCT-TCAA---CGAT..1911.0010000010
droYak3
GCT----AGTTAT--AAACTTTCGGAGGTCAGTC--------------------------------------------------AAATCAAATCGTCC-TACAGTTGTGGAGACTC-CATTTTGACCACAGCTGCCTAGTC-------CGGCGTTTACCACCG------------TGTCCA-----------------------------TCCACGC-C-CCGCCC--ACACGCACACACACACCCATCAGAGAACACT-CA--C--------------------------A-----C----AACAACTCAGAGCATT------TT----------------------CT-AATTA----TTAATTGT----------ATTCTTAAGCTTC-GCATTCTTTCGATGTGTTCCTTGCTCGCGTAGT-------------TCT-TTAA---CGATTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........TAT--AAACTTTCGGAGGTCAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.................................................................................................C-TACAGTTGTGGAGACTC-CATT..............................................................................................................................................................................................................................................................................................................................................2211.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATTGT----------ATTCTTAAGCTTC-GC.............................................................2011.00101000000000
.............................CAGTC--------------------------------------------------AAATCAAATCGTCC-TACAGT..............................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTCGATGTGTTCCTTGCTCGC...................................2511.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTTGCTCGCGTAGT-------------TCT-TTAA---C.....2611.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTTCCTTGCTCGCGT.................................1911.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................AATTGT----------ATTCTTAAGCTTC-GC.............................................................2111.00101000000000
droEug1
GGT----AATTAT--CACATTTTGAAAGT---------------------------ATTATTAGAGCTGTAAATTATAAATATCAAATCGAGTTA---------TTTTGGCGACTTTTCTTGCGACCAAAATCGCTTAATC-------CAGTGCTTACCATCG------------C-G------------------------------------------CCGCCC--ACACGCACACACCC-----------TTCATTGCACAT--------------------------G-----C----AAAAGCTCAGAGCATT------T---------------------AACT-AATTAT---TTAATTGT----------AATATTAGGTTTT-GCA-----------------GTGCTTGCGTAGT-------------TCT-TTTA---TAATTASizeHit CountTotal NormTotal
No Reads
droBia1
ACATTTTATTTATTGGATCGCT--GAGTTTCTT--GGCCTTTCCAAGCTATTCCGCATTATTAGAGCTGTAAACCACAAAGATCAAATC-----AAAGTTAAAGTTTTGGAGGCTTTTGTTCTGACCGAAGTTGCTTAGTC-------CGTCGTTTACCACCG------------C-CCCA-----------------------------AACACGC-C--CGCCC--ACACACAC----T-GCA---C--------------AC-------------ACAGCAA------------G----AAGAGCTCAGAGCATT------T---------------------TACT-AATTAT---TTAATTAT----------AATCTTAAGT-TC-GCCTGCTTTCGATGTGTTCCTTGCTCGCGTAGT-------------TCT-TGAA---TGATCASizeHit CountTotal NormTotal
No Reads
droTak1
GGT----AATTAT--CAACTTTTGCAAATCAATTA----ATTGTAAATTATTCCGTATTGTTAGA-----------------TCAAAAA-----AAAGTTATGGATGTGGAGGCTTTTATTTTT--------------------------GTAC-CACAGCCG------------C-CCCC-C--------------------------GACCACGC-CCCTGCCC--ACACGCACACACCC-----------ATCACTGCACACACAGAGAAAACAGAAAACAA-C----A-----A---CAAGAGCTCAGAGCATT------T---------------------TACT-AATTATTTTTTAATTGT----------AATTTTAAGTTTG-GCATGCTTTCGATGTGTTCCTTT-------AAT-------------GAT-TTAA---TGATTASizeHit CountTotal NormTotal
No Reads
droEle1
AGT------------------------------------------------------------------------------------------------------TGTCA-GGCTTTTATTTTGACCGCAGTTGTTCAGTC-------CGGTATTTAACACCA------------G-CCCA-----------------------------CCCACTCCC-TCG-CA--GCACACCCACTCCC-----------AACACCGCA--C--------------------------A-----C-----------------------------------------------------AACTAT---TTAATTGT----------AATCTTAAGTTTC-GCATACGTTCGATGTGATCCTTGCTCGCGTAGT-------------TCT-TTAAAACCGATTTSizeHit CountTotal NormTotal
No Reads
droRho1
A---------------------------------------------------------------------------------------------------------------------------------GTTGTTCAGTC-------CGGTAC-TAACACCG------------C-CCTA-----------------------------CCCACTTCC-CCGCCC--ACACGCACATACCC-----------AACACCACA--C--------------------------A-----C----AACAGCTCAAAGCATT------T---------------------TACT-AATTAT---TTAATTGT----------AATCTTAAGTTTC-GCATGCTTTCGATGTGTTCCTTGATCGCGGAGT-------------TCT-GTAAAACCTATTASizeHit CountTotal NormTotal
No Reads
droFic1
ACC----TATTATTAGAGCTTT---------------------------------------------------------------AATC-----AAATTTATAATTGAGGGTGCTTTCATTTTGACCGTAGCTCTTATTTC-------CTGCATTTACCACCG------------C-CACA-----------------------------CCCACTAAC-CCGCTC--AC--------GCC-GCA---G------------A--C--------------------------A-----C----AACAGCTCAGAGCATT------T---------------------TACT-AATTAT---TTAAATTT----------AATCGTAAGATTC-GCATGCTTTCGATGTGTTCCTTTCTCGCGTAGT-------------TCT-TAAAATACGACTASizeHit CountTotal NormTotal
No Reads
droKik1
AC----------------------------------------------------------------------------------------------------------------------------CGCAGTTGCTT-GTCCAAGTTCCGGCATTTACCACCG------------C-CCCC-C--------------------------GTC---------CGCCT--ACACTTACACACACACA---CACACAACACC-TA--C---------------C------GCACAACCTAGCAC-AGC-------AGCAGC------T---------------------CACGTATCTAT--TTTAACTTT----------AAC----------------------TTGGGTTCTTTGCTTGTGTTGT-------------TCC-TT---------TTSizeHit CountTotal NormTotal
No Reads
droAna3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACGCACACACC-GCA---C-------AC---A--A--------------------------A----------CACAGCTCAGAGCAAA------C---------------------TACT-ACCTATGTTTAATTTGT----------AATCCAATGTTTT-TGCTGCTTTTAATGTGTTCCTTGTTCGCGGAGAGAAAG--------AGT-TCAA---AAGCTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTTGTTCGCGGAGAGAAAG--------A................2412.002100010
................................................................................................................................................................................................................................................C-GCA---C-------AC---A--A--------------------------A----------CACAGCTCAGAGC............................................................................................................................................2311.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTGTTCGCGGAGAGAAAG--------A................2211.001000010
................................................................................................................................................................................................................................................................................................................................................................................................ATGTTTT-TGCTGCTTTTAATGTGTT.............................................2511.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTTGTTCGCGGAGAGAA...........................2111.001000001
................................................................................................................................................................................................................................................................AC---A--A--------------------------A----------CACAGCTCAGAGCAAA------C---------------------T............................................................................................................2311.001100000
.................................................................................................................................................................................................................................................................C---A--A--------------------------A----------CACAGCTCAGAGCAAA------C---------------------TACT-ACC.....................................................................................................2811.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................TTTAATGTGTTCCTTGTTCGC...................................2111.001010000
droBip1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACGCACACACC-GCA---C---------C-CA--A--------------------------A----------CACAGCTCAGAGCAAA------C---------------------TACT-ACCTATGTTTTATTTTT----------AATCCAATGTTTT-TGCTGCTTTTAATGTGTTCCTTGTTCGCGTAGAGAAAG--------AGT-TCAA---AAGCTGSizeHit CountTotal NormTotal
No Reads
dp5
TGT------------------------------------------------------------------------------------------------------------------------------------TTAGTCCAGGCACAGGCATTTACAACCCAAGATTCTCCTTTGTCCTCCCACAAGCAGCATACTGGCACCCGCACAC---------ACA-TACCACA-------------------------------CACACGCACAGCGCCCAAAATGA------------G----AACAGCTCAGAGCAGTCCTTTTTT----------------------TT-AATTA----ATAATAAT----------TATCTTAAGTTTTGGCACGCTTTTAATGTGTTCCTTGTTCGAGTAGT-------------T---------------ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.GT------------------------------------------------------------------------------------------------------------------------------------TTAGTCCAGGCACAGGC...............................................................................................................................................................................................................................................................................................................1912.0020110000000
.GT------------------------------------------------------------------------------------------------------------------------------------TTAGTCCAGGCACAGGCATTTAC.........................................................................................................................................................................................................................................................................................................2511.0010010000000
.................................................................................................................................................................................TCCTCCCACAAGCAGCATACTGGCACCCG.........................................................................................................................................................................................................................................................2911.0010100000000
droPer2
TGT------------------------------------------------------------------------------------------------------------------------------------TTAGTCCAGGCACAGGCATTTACAACCCAAGATTCCCCTTTGTCCTCCCACAAGCAGCATACTGGCACCCGCACAC---------ACA-TACCACA-------------------------------CACACGCACAGCGCCCAAAATGA------------G----AACAGCTCAGAGCAGTCCTTTTTT----------------------TA-AATTA----ATAATAAT---TAAA-T-TATCTTAAGTTTTGGCACGCTTTTAATGTGTTCCTTGTTCGCGTAGT-------------T---------------ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................TTTAATGTGTTCCTTGTTCGCGTA................................2411.001010000
droWil2
ATA----GGTTCC--CAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTCGTTTT-------------TGT-TCAG---T----TSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-AATTATTTAATAA-TGTA-------AG-TTGAAGAATTTA-ACCTGCTTTTAATATGTTCCTTTCTTGTGTAAAGTCTTTTTGC-------TATT---TTGCCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................CTTTTAATATGTTCCTTTCTTGTGT.................................2511.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................ATAA-TGTA-------AG-TTGAAGAATTT.................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................ATTTAATAA-TGTA-------AG-TTGAAGAATTTA-...............................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTAAAGTCTTTTTGC-------TATT---......2211.001000010000000000000000000000000000000000000000000000000000000000
droMoj3
CGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-CTTCCC--ACACACACACACACACAC-TCAAAGACCG----------------------AACCCAGCGCACA-----T----TGC-------AGCTTT------AGCTAAATTAAAATTACTTGTGTACT-AATTATTTATTAATTGTA-------AG-TTCAAGAATTTA-ATCTGCTTTTAATATGTTCCTTTCTTGTGTAAAGTCGTTTTGCTGATTTCCTAT---TGTTTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................................................................................................AATTACTTGTGTACT-AATTA...................................................................................................2011.001000001
...................................................................................................................................................................................................................................................................................................................................................ACTTGTGTACT-AATTATTTATTAAT..........................................................................................2511.001100000
............................................................................................................................................................................................................................................................................................................................................................CT-AATTATTTATTAATTGTA-------AG-TTCAAGA.....................................................................2911.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTCCTTTCTTGTGTAAAGT............................2211.001000001
droGri2
CCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAC--ACACGCATACACACTCGC-TCAGAAACCG----------------------AACCCAGCACACA-----T----TAC-------AGCTTT------AGCTAAATTAAAAT--------TACT-AATAA---------TCTA-------AG-TTCATGA------------AATTAACCTGTTCCTTTCTTGTGTAAAGTCTTTTTGCAATTTT-TTTT---TTGCTASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................................................................................................................................................................C-TCAGAAACCG----------------------AACCCAGCA.......................................................................................................................................................................2011.00110

Generated: 05/19/2015 at 04:10 PM