ID:dsi_23320 |
Coordinate:3l:15837039-15837102 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
five_prime_UTR [3l_15836803_15836998_+]; CDS [3l_15836999_15837038_+]; exon [3l_15836803_15837038_+]; exon [3l_15837103_15837341_+]; CDS [3l_15837103_15837341_+]; intron [3l_15837039_15837102_+]
No Repeatable elements found
| ##################################################----------------------------------------------------------------################################################## AGCTACAAGGATGTCGCCCAATTCTATGTGGATCTTCGGCCTCATAAGTGGTAAATAAATTAGGAGCAATAGAAAAAATCCAAGGTGGTGCTAAATGATTTACAAAACCAACAGCTCTGCTTCTGACTCTGGGTTCGACGGGGCTATCCTCGAAGGTTTTGGAA **************************************************.....(((((((..((((...........(((...)))))))...)))))))............************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M023 head |
M024 male body |
SRR553485 Chicharo_3 day-old ovaries |
SRR553486 Makindu_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................TTCTATGTGGATCTTCGGCCT.......................................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................CCAATTCTATGTGGATCTTCGACC........................................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................CAATTCTATGTGGATCTTCGGT............................................................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................CCAATTCTATGTGGATCTTCGGCC........................................................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................AAGTGCTCTGCTTCTGACTCTGGGTT............................. | 26 | 2 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .........GATGTCGCCAAATTCTATGTG...................................................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ......................TCTATGTGGATCTTCGGCCT.......................................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..............................................................................................................AGTGCTCTGCTTTTGACTCTGGGT.............................. | 24 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| .........................................................................................................................GCTGATTCTGGATTCGACGGG...................... | 21 | 3 | 3 | 0.67 | 2 | 0 | 0 | 0 | 1 | 1 | 0 |
| ............................................................TAGGAACAATAGAAAAA....................................................................................... | 17 | 1 | 6 | 0.17 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ................................................................................................................................CTGGCTTCGACGGGG..................... | 15 | 1 | 7 | 0.14 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ............................................................................................................................GATTCTGGATTCGACGGG...................... | 18 | 2 | 8 | 0.13 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .........................................................................................................................ACTGACGCTGGGTTCGA.......................... | 17 | 2 | 10 | 0.10 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| .............................................................................................................................ATTCTGGATTCGACGGG...................... | 17 | 2 | 11 | 0.09 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ....................................................AAATAAATTAGGAGAA................................................................................................ | 16 | 1 | 12 | 0.08 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
|
TCGATGTTCCTACAGCGGGTTAAGATACACCTAGAAGCCGGAGTATTCACCATTTATTTAATCCTCGTTATCTTTTTTAGGTTCCACCACGATTTACTAAATGTTTTGGTTGTCGAGACGAAGACTGAGACCCAAGCTGCCCCGATAGGAGCTTCCAAAACCTT
**************************************************.....(((((((..((((...........(((...)))))))...)))))))............************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
SRR902009 testis |
SRR553485 Chicharo_3 day-old ovaries |
GSM343915 embryo |
|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................ACTAAATGTTTTGGT...................................................... | 15 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .....................AAGAGACACCTAGCAGC.............................................................................................................................. | 17 | 2 | 16 | 0.06 | 1 | 0 | 1 | 0 | 0 |
| ...........................................................................................................GGTTGTCGCGTTGAAGACT...................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 |
| ..................................................................................................AAATGTTTTGGTTGTT.................................................. | 16 | 1 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 |
| ......................................................................TCTTTTTTAGGTTTCAGCAT.......................................................................... | 20 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 |
Generated: 04/23/2015 at 09:37 PM