ID:

dsi_23202

 Coordinate:

3r:14110342-14110401 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.9 -5.9

Flybase annnotation

CDS [3r_14110074_14110326_-]; five_prime_UTR [3r_14110327_14110467_-]; exon [3r_14110074_14110467_-]

No Repeatable elements found

Sense Strand Reads

################################################################################################################################################################
TCGAGGCGTTCGAGGCCCCCACATCAGTACCAGTTTCACGAGCGTAGGCCGTTAGAACGCATTTCACAACTGGCAACAATTAAGCCGAATTAATTGTATTGAATTCGTAGTTCCCGAAACTAACGATGAAACCAACAGCTGGACAAACGGGTTTTCTGGC
**************************************************....((...................((((((((......)))))))).......))****************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M023
head
 M024
male body		 M053
female body
 O002
Head
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR902009
testis
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
................................GTTTCACGAGCGTAGGCC.............................................................................................................. 18 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0
..................................TTCACGAGCGTAGGCCGTTAGAAC...................................................................................................... 24 0 1 4.00 4 0 3 0 1 0 0 0 0 0 0 0
...............................AGTTTCACGAGCGTAGGCC.............................................................................................................. 19 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0
...............................AGTTTCACGAGCGTAGGCCGTTAGAAC...................................................................................................... 27 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0
..................................................GTTAGAACGCATTTCACAACTGGCA..................................................................................... 25 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................CTAACGATGAAACCAACAGC..................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...............................AGTTTCACGAGCGTAGGCCG............................................................................................................. 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
........................................................................................ATTAATTGTATTGAATTC...................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AACGATGAAACCAACAGCTGGAC................ 23 0 1 2.00 2 0 0 1 0 0 0 0 0 1 0 0
..................................................GTTAGAACGCATTTCACAACT......................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
................................GTTTCACGAGCGTAGGCCG............................................................................................................. 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
..............................................................................................................TTCCCGAAACTAACGATGAAACCAACA....................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...............................................................................................GTATTGAATTCGTAGTTCCCGAAA......................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................TAACGATGAAACCAACAGCTGGAC................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................CACGAGCGTAGGCCGTTAGAACGC.................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.....................................ACGAGCGTAGGCCGTTAGAACGCAT.................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.................................TTTCACGAGCGTAGGCCGTTAGAAC...................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................GAGCGTAGGCCGTTAGAACGCATTTCA.............................................................................................. 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
...................................................TTAGAACGCATTTCACAACTG........................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................CGATGAAACCAACAGCTGGACAAAC............ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TAACGATGAAACCAACAGCTGGCCAAA............. 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
......................ATCAGTACCAGTTTCACGAGCGTAGGCC.............................................................................................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................CTTCCCGAAACTAACGATGAAACC........................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................CGAGCGTAGGCCTTTAGAAC...................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................ACAGCTGGACAAACGGGT........ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
..................................TTCACGAGCGTAGGCCGTTAGA........................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................AGCGTAGGCCGTTAGAAC...................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................GATGAAACCAACAGCTGGAC................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................TTAATTGTATTGAATTCGTAGTTCC.............................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................CACTACCAGTTTCACGACCGTAGGCC.............................................................................................................. 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...AGGCGTTCGAGGCCCCCA........................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................AACGATGAAACCAACAGCTGGACAAACGG.......... 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..........................GTACCAGTTTCACGAGCGTAGGCC.............................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................GTTTCACGAGCGTAGGCCGTTAGA........................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................CTAACGATGAAACCAACAGCTGGAC................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............................................GCCGTTAGAACGCATTTCACAACTG........................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................AGAACGCATTTCACAACTG........................................................................................ 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.........................AGTACCAGTTTCACGAGCGTAGGCC.............................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................AACTAACGATGAAACCAACAGCTGGAC................ 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................TTTCACGAGCGTAGGCCG............................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
......................................CGAGCGTAGGCCGTTAGAACGC.................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.......................................GAGCGTAGGCCGTTAGAACGCAT.................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................GTATTGAATTCGTAGTTCCCGAAACG....................................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................GAAACTAACGATGAAACCAACAGCTG................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................ATTGTATTGAATTCGTAGTTCCCGAAAC........................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................AGGCCGTTAGAACGCATTTCACAACT......................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............................ACCAGTTTCACGAGCGTAGGCC.............................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................ATGAAACCAACAGCTGGACAAACGG.......... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................TAGGCCGTTAGAACGCATTTCAC............................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
....................................CACGAGCGTAGGCCGTTAGAACGCATT................................................................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................................GTTTCACGAGCGTAGGCCGTTAGAAC...................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................ACCAGTTTCACGAGCGTAGGCCGTTAGA........................................................................................................ 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.......................................GAGCGTAGGCCGTTAGAA....................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..................................TTCACGAGCGTGGGCCGTTAGA........................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CGATGAAACCAACAGCTGGAC................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AACGATGAAACCAACAGCTG................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................GTTAGAACGCATTTCACAACTGGCAAC................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................AGTTTCACGAGCGTAGGCCGT............................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................CGAGCGCAGGCGGTTAGA........................................................................................................ 18 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1
............................................................AATTCAGAACTGGCAACAATC............................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0
..................................................................................AGCCGAGTTAATCGTATTGG.......................................................... 20 3 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0
...........................................................CATTGCACAACTGGCA..................................................................................... 16 1 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1
.................................................................................AAGCCGAGTTAATCGTA.............................................................. 17 2 16 0.06 1 0 0 0 0 0 0 0 0 0 1 0
....................................................................................................................................CAACAGCTGGACAGA............. 15 1 16 0.06 1 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

AGCTCCGCAAGCTCCGGGGGTGTAGTCATGGTCAAAGTGCTCGCATCCGGCAATCTTGCGTAAAGTGTTGACCGTTGTTAATTCGGCTTAATTAACATAACTTAAGCATCAAGGGCTTTGATTGCTACTTTGGTTGTCGACCTGTTTGCCCAAAAGACCG
******************************************************....((...................((((((((......)))))))).......))************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 O002
Head
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
...................................AGTGCTCGCATCCGGCAAT.......................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
.........................................................GCGTAAAGTGTTGACCGTTGTT................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0
.................................................................................TTCGGCTCAGTTAGCATAAC........................................................... 20 3 4 1.00 4 0 0 4 0 0 0
......................................................................................................................TGCTTGCTACTACGGTTGTC...................... 20 3 8 0.13 1 0 0 0 1 0 0
....................................................ATATTGCGTAAAGTG............................................................................................. 15 1 9 0.11 1 0 0 0 0 1 0
...........................ATGGTCAAAGTGCCTG..................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:14110292-14110451 - dsi_23202 TCGAGGCGTTCGAGGC---CC-------CCAC----ATCAGTACCAGTTTC-------ACGAGC---GTAGGCCGT-----------T-AGAACGCATTTCACAACTGGCAACAATTAAGCC--GAATTAATTGTATTGAA--TTC--GTAGTTCCCG-AAAC-----------------T-----------------AACGATGAAACCAACAGCTGGACAAACGGGTTTT-CTGGC
droSec2 scaffold_0:14976029-14976189 - TCGAGGCGTTCGAGGC---CC-------CCAC----ATCAGTAGCAGTTTC-------ACGAGC---GTAGGCCGT-----------TAAGAACGCATTTCACAACTGGCAACAATTAAGCC--GAATTAATTGTATTGAA--TTC--GTAGTTCCCG-AAAC-----------------T-----------------AACGATGAAACCAACAGCTGGCCAAACGGGTTTT-CTGGC
dm3 chr3R:6982838-6982997 + TCGAGGCGTTCGTAGC---CC-------CCAT-----TTAGTATCAGTTTC-------ACGGTC---GTTGGTCGT-----------TAAGAACGCATTTCACAACTGGCAACAATTAAGCC--AAATTAATTGTATTGAA--TTC--GCAGTTTTCG-AAAC-----------------T-----------------AACGATGAAACCAACAGCTGGCCAAACGGGTTTT-CTGGC
droEre2 scaffold_4770:14632555-14632714 - CCGAGGCGTTCGTACC----C-------CTAT----AACAGTATCGGTTTC-------ACGATC---GTTAGTCGT-----------TAAGAACGCATTTCCCAACTGGCTACAATTAGGCC--GAATTAATTGTTTTTAA--TTC--GTAGTTTCTG-AAAC-----------------T-----------------AACGATGCAACCAACAGCTGGCCAAACGAGTTTT-CTGGC
droYak3 3R:11014499-11014663 + CCGAGGCGTTCGTACC----C-------CTACATATATCATTATCAGTTTC-------ACGATCC--GTTGGCCGT-----------TAAGAACGCATTTCACAACTGGCCACAATTAAGCC--GAATTAATTGTTTTGAA--TTC--GTAGTTTCTG-TAAC-----------------T-----------------AACGATGAAACCAACAGCTGGCCAAACGGGTTTT-CTAAC
droEug1 scf7180000409797:599945-600113 + CCTAGGCGTCCGCACC---TA-------ACAT----AT-----CCAGTTCCAGAGACCACAATCG--TTTGGACGA-----------TAAGAACGCATTTCACAA-------CGATTAAGTC--GAATTAATTGTTTAGAA--TTC--GTAGTTCGGA-AAACTACAAATT----------------------AAAACAAAAATGAAACCAACATCTGGCCAAACCAGTTTT-CTGGC
droBia1 scf7180000302075:3785233-3785397 - CCAAGGCGTCCGTACC----C-------CTAT----AT------CAGCCGCATAGAACCCGATC---GCCGGTCGA-----------TAAGAACGCATTTCACAACTGGCGACGATTAAGTC--GAATTAATTGTTTTAAATAGTTTGGTAGTTTGGA-GAAC-----------------T-----------------GAAAATGAAACCAACATCTGGGCAAACGAGTTTT-CTGGC
droTak1 scf7180000415675:42644-42808 + CCAAGGCGTCCGCACCTACCC-------CTAT----AT------TAGCTCCATAGAGTACGATC---GTCGGTCGA-----------TAAGAACGCATTTCACAACTGGCAACGATTAAGTC--AAATTAATTGTTTGGAA--TTA--GTAGTTTGGA-AAAC-----------------T-----------------GAAAATGAAACCAACAGCTGGCCAAACGAGTTTT-CTGGC
droEle1 scf7180000491008:2727336-2727484 - CCAAGGCAGTCGTACC----CGTATAGCGTAT----AT------CAGCTGCATAGAACAAAACC---GCTGGCCGA-----------TAGGAACGCACTTCACAGCTGTCGCGAATTAA------------------------TTC--ATAGTTTGGA-AATC-----------------G-----------A-----AAAAATGAAACAAAAAGCTGGCCACACCAGTTAT-CTAGC
droRho1 scf7180000760575:19659-19820 - CCAAGGCGACAGTACC----C-------ATAC----AT------CAGCTCCATAGAACACAGTC---GCCGGCCGA-----------TAAGAACACAGTTCCCAAGTGGCAACAATTAAGTG--GAATTAATTGTTTAGAA--ATC--ATAGTCCGAA-AATC-----------------G-----------G-----AAAAATGAGACCAACAGCTGGCCAAACACGTTTT-GTGGC
droFic1 scf7180000453800:23033-23188 + CCAAAGTGTTCGC-----------------AT----AT------CAGCTCCACAAAATACGATC---GGCGGCTGA-----------TGGGAACGCATTCAACAGCTGGACAGAATTAAGTG--GAAATAAATGTCTAGAA--TTT--GTCGTTTTTA-AATC-----------------G-----------G-----AAAAATGAAACTAACCCCGCGCCAAACGAGTTTT-CTGGC
droKik1 scf7180000302650:413969-414146 + CGAAGGCGTGCGTATC----GA------TGAT----AG------CAGCTTCTGGGAACACCACCGTTTGGGTTTGATAACAATAAAGAACACGCGTATTTCACAACTAATGACAATTAAGTC--CCATTAATTGGCTGGAA--TTT--GTGGCTCGAA-GAAC-----------------G---------GA------TAAAATGAAGCCAACAGGTGGTCAAACGAGTTTC-CTGGG
droAna3 scaffold_13340:12156870-12157013 - G-----CGTTCGA-----------------AT----AG------CAGCTCCACGTAAAACGTTC---GCCAACAAA-----------CATAATCGTATTCCATATTTGG-----ATTA------GTCTTAATTATATAGAA--TTC--AAAGTTTATA-AGAC-----------------G-----------CAA---AACAATGCAGCTAACAAGTGGCCGGACAGGTTTT-CTGGC
droBip1 scf7180000396691:1044788-1044893 - C---------------------------------------------------------------------------------------------GTATTCCATAATTGGATACGGCTAATTA--TTCCAATTTATATCGAA--ATC--AAAGTTTATA-AAAC-----------------G-----------C---AAAAAAATGCAGCTAACAGGCGGCCGAACAGGTTTT-CTTGC
dp5 2:28494597-28494767 + CCAACGCGGGAATATC----GATAGA----AC----AT------CAGCTGGA---ACTACAACA---AGCCA--CA--------TACAAACATTCTATTTCACAACTGGCAGCGATTAGCCCCCCAGTTATTCGTGTATAA--TTC--CAACATTCGGAACAC-----------------C-----------CTGAACAGCCATGAAGTCATTGAGTTATAAAACAAGTTTC-GCGGC
droPer2 scaffold_6:3825071-3825241 + CCAACGCGGGAATATC----GATAGA----AC----AT------CAGCTGGA---ACTACAACA---AGCCA--CA--------TACAAACATTCTATTTCACAACTGGCAGCGATTAGGCCCCCAGTTATTCGTGTATAA--TTC--CAACATTCGGAACAC-----------------C-----------CTGAACAGCCATGAAGTCATTGAGTTATAAAACAAGTTTC-GCGGC
droVir3 scaffold_13047:4889141-4889156 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACCAGTTTC-ATAGG
droMoj3 scaffold_6540:21520303-21520419 + G----------------------------------------------------------------------------------------------CATTTCACAACA--CAATCATTAGTTG--CAGCTATTAGTATTTGA--TTA--GCTATAT------AT-------TGTGATTAAGAGCAGTAACTAT------CGGAATGTCCCCCTCGGACCGCAGAACCAGTCTCACTGGC
droGri2 scaffold_14906:10321760-10321894 - AATC-----------------------------------------------------------T---AGCGAGTGT-----------TCAAAGTGAATTTTAGAACAATCAACAATTAATTG--CTTTTATT-ATTATTATTATTC----CGATATTG-TGCT-------------TAACAA--AGAACAAA------ACAAATGTCGCAATCAAGTAGTAAGACTGGTTTC-ATTGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCGAGGCGTTCGAGGC---CC-------CCAC----ATCAGTACCAGTTTC-------ACGAGC---GTAGGCCGT-----------T-AGAACGCATTTCACAACTGGCAACAATTAAGCC--GAATTAATTGTATTGAA--TTC--GTAGTTCCCG-AAAC-----------------T-----------------AACGATGAAACCAACAGCTGGACAAACGGGTTTT-CTGGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................GTTTC-------ACGAGC---GTAGGCC....................................................................................................................................................................1814.00400400000000000000
................................................TTC-------ACGAGC---GTAGGCCGT-----------T-AGAAC................................................................................................................................................2414.00430010000000000000
.............................................AGTTTC-------ACGAGC---GTAGGCC....................................................................................................................................................................1913.00330000000000000000
.............................................AGTTTC-------ACGAGC---GTAGGCCGT-----------T-AGAAC................................................................................................................................................2713.00330000000000000000
..........................................................................GT-----------T-AGAACGCATTTCACAACTGGCA...............................................................................................................................2513.00320100000000000000
..................................................................................................................................................................C-----------------T-----------------AACGATGAAACCAACAGC......................2012.00200200000000000000
.............................................AGTTTC-------ACGAGC---GTAGGCCG...................................................................................................................................................................2012.00220000000000000000
..............................................................................................................................ATTAATTGTATTGAA--TTC--..........................................................................................1812.00200200000000000000
......................................................................................................................................................................................................AACGATGAAACCAACAGCTGGAC.................2312.00201000000000100000
..........................................................................GT-----------T-AGAACGCATTTCACAACT...................................................................................................................................2112.00200200000000000000
..............................................GTTTC-------ACGAGC---GTAGGCCG...................................................................................................................................................................1912.00220000000000000000
........................................................................................................................................................TTCCCG-AAAC-----------------T-----------------AACGATGAAACCAACA........................2712.00200200000000000000
.....................................................................................................................................GTATTGAA--TTC--GTAGTTCCCG-AAA............................................................................2411.00101000000000000000
....................................................................................................................................................................................T-----------------AACGATGAAACCAACAGCTGGAC.................2411.00100100000000000000
..................................................C-------ACGAGC---GTAGGCCGT-----------T-AGAACGC..............................................................................................................................................2411.00100000100000000000
..........................................................ACGAGC---GTAGGCCGT-----------T-AGAACGCAT............................................................................................................................................2511.00100000000000001000
...............................................TTTC-------ACGAGC---GTAGGCCGT-----------T-AGAAC................................................................................................................................................2511.00100100000000000000
............................................................GAGC---GTAGGCCGT-----------T-AGAACGCATTTCA........................................................................................................................................2711.00100000000000001000
...........................................................................T-----------T-AGAACGCATTTCACAACTG..................................................................................................................................2111.00110000000000000000
........................................................................................................................................................................................................CGATGAAACCAACAGCTGGACAAAC.............2511.00100100000000000000
....................................ATCAGTACCAGTTTC-------ACGAGC---GTAGGCC....................................................................................................................................................................2811.00101000000000000000
...................................................................................................................................................................................................................ACAGCTGGACAAACGGGT.........1811.00100000000000100000
................................................TTC-------ACGAGC---GTAGGCCGT-----------T-AGA..................................................................................................................................................2211.00100100000000000000
.............................................................AGC---GTAGGCCGT-----------T-AGAAC................................................................................................................................................1811.00110000000000000000
.........................................................................................................................................................................................................GATGAAACCAACAGCTGGAC.................2011.00100100000000000000
...............................................................................................................................TTAATTGTATTGAA--TTC--GTAGTTCC..................................................................................2511.00100100000000000000
...AGGCGTTCGAGGC---CC-------CCA...............................................................................................................................................................................................................1811.00100000100000000000
......................................................................................................................................................................................................AACGATGAAACCAACAGCTGGACAAACGG...........2911.00100010000000000000
........................................GTACCAGTTTC-------ACGAGC---GTAGGCC....................................................................................................................................................................2411.00100100000000000000
..............................................GTTTC-------ACGAGC---GTAGGCCGT-----------T-AGA..................................................................................................................................................2411.00100100000000000000
..................................................................................................................................................................C-----------------T-----------------AACGATGAAACCAACAGCTGGAC.................2511.00101000000000000000
.......................................................................GCCGT-----------T-AGAACGCATTTCACAACTG..................................................................................................................................2511.00101000000000000000
.........................................................................................AGAACGCATTTCACAACTG..................................................................................................................................1911.00101000000000000000
.......................................AGTACCAGTTTC-------ACGAGC---GTAGGCC....................................................................................................................................................................2511.00100100000000000000
................................................................................................................................................................AAC-----------------T-----------------AACGATGAAACCAACAGCTGGAC.................2711.00101000000000000000
...............................................TTTC-------ACGAGC---GTAGGCCG...................................................................................................................................................................1811.00100000000001000000
...........................................................CGAGC---GTAGGCCGT-----------T-AGAACGC..............................................................................................................................................2211.00101000000000000000
............................................................GAGC---GTAGGCCGT-----------T-AGAACGCAT............................................................................................................................................2311.00100000000000010000
.....................................................................................................................................GTATTGAA--TTC--GTAGTTCCCG-AAAC-----------------G-----------------........................................2611.00101000000000000000
.............................................................................................................................................................G-AAAC-----------------T-----------------AACGATGAAACCAACAGCTG....................2611.00100100000000000000
..................................................................................................................................ATTGTATTGAA--TTC--GTAGTTCCCG-AAAC-----------------..........................................................2811.00100100000000000000
.....................................................................AGGCCGT-----------T-AGAACGCATTTCACAACT...................................................................................................................................2611.00101000000000000000
..........................................ACCAGTTTC-------ACGAGC---GTAGGCC....................................................................................................................................................................2211.00100100000000000000
..........................................................................................................................................................................................................ATGAAACCAACAGCTGGACAAACGG...........2511.00100100000000000000
....................................................................TAGGCCGT-----------T-AGAACGCATTTCAC.......................................................................................................................................2311.00100000000000010000
..................................................C-------ACGAGC---GTAGGCCGT-----------T-AGAACGCATT...........................................................................................................................................2711.00101000000000000000
..............................................GTTTC-------ACGAGC---GTAGGCCGT-----------T-AGAAC................................................................................................................................................2611.00100100000000000000
..........................................ACCAGTTTC-------ACGAGC---GTAGGCCGT-----------T-AGA..................................................................................................................................................2811.00100010000000000000
............................................................GAGC---GTAGGCCGT-----------T-AGAA.................................................................................................................................................1811.00100000000001000000
........................................................................................................................................................................................................CGATGAAACCAACAGCTGGAC.................2111.00100100000000000000
......................................................................................................................................................................................................AACGATGAAACCAACAGCTG....................2011.00100100000000000000
..........................................................................GT-----------T-AGAACGCATTTCACAACTGGCAAC.............................................................................................................................2711.00100100000000000000
.............................................AGTTTC-------ACGAGC---GTAGGCCGT-----------.......................................................................................................................................................2111.00110000000000000000
droSec2
TCGAGGCGTTCGAGGC---CC-------CCAC----ATCAGTAGCAGTTTC-------ACGAGC---GTAGGCCGT-----------TAAGAACGCATTTCACAACTGGCAACAATTAAGCC--GAATTAATTGTATTGAA--TTC--GTAGTTCCCG-AAAC-----------------T-----------------AACGATGAAACCAACAGCTGGCCAAACGGGTTTT-CTGGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................ATCAGTAGCAGTTTC-------ACGAGC---GTA........................................................................................................................................................................2411.0010100
.......GTTCGAGGC---CC-------CCAC----ATCAGT....................................................................................................................................................................................................2111.0010100
......................................CAGTAGCAGTTTC-------ACGAGC---...........................................................................................................................................................................1911.0010010
.............................................AGTTTC-------ACGAGC---GTAGGCCG...................................................................................................................................................................2011.0010001
.............................................AGTTTC-------ACGAGC---GTAGGCCGT-----------TAAG...................................................................................................................................................2511.0010100
....................................ATCAGTAGCAGTTTC-------ACGAGC---GTAGGCC....................................................................................................................................................................2811.0010100
..........................................AGCAGTTTC-------ACGAGC---GTAGG......................................................................................................................................................................2011.0011000
.....................................TCAGTAGCAGTTTC-------ACGAGC---G..........................................................................................................................................................................2111.0010010
...................CC-------CCAC----ATCAGTAGCAGTTTC-------A...................................................................................................................................................................................2211.0010001
..........................................AGCAGTTTC-------ACGAGC---GTAGGCCGT-----------TAGT...................................................................................................................................................2811.0010100
.......................................AGTAGCAGTTTC-------ACGAGC---GTAGGC.....................................................................................................................................................................2411.0010010
.............................................AGTTTC-------ACGAGC---GTAGGC.....................................................................................................................................................................1811.0010001
....................C-------CCAC----ATCAGTAGCAGTTTC-------A...................................................................................................................................................................................2111.0010100
.............................................................AGC---GTAGGCCGT-----------TAAGAACG...............................................................................................................................................2011.0011000
....................................ATCAGTAGCAGTTTC-------ACGAGC---GTAGGC.....................................................................................................................................................................2711.0010100
.............................................AGTTTC-------ACGAGC---GTAGGCCGT-----------TAAGAA.................................................................................................................................................2711.0010100
.............................................................AGC---GTAGGCCGT-----------TAAGAA.................................................................................................................................................1811.0011000
.............................................................AGC---GTAGGCCGT-----------TAAGAACGCAT............................................................................................................................................2311.0010001
dm3
TCGAGGCGTTCGTAGC---CC-------CCAT-----TTAGTATCAGTTTC-------ACGGTC---GTTGGTCGT-----------TAAGAACGCATTTCACAACTGGCAACAATTAAGCC--AAATTAATTGTATTGAA--TTC--GCAGTTTTCG-AAAC-----------------T-----------------AACGATGAAACCAACAGCTGGCCAAACGGGTTTT-CTGGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................GCAACAATTAAGCC--AAAT..............................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CGAGGCGTTCGTAGC---CC-------C.................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000020000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................AACGATGAAACCAACAGCTGGCCAAAC.............2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GTC---GTTGGTCGT-----------TAAGAA.................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000100000
..........................................ATCAGTTTC-------ACGGTC---GTTGG......................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000000000000000000000010000010000000000000000000
...............................................................C---GTTGGTCGT-----------TAAGAACGCA.............................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000
....................................................................TTGGTCGT-----------TAAGAACGCA.............................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
.............................................................GTC---GTTGGTCGT-----------TAAGAAC................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000000000000010000000000000000
...AGGCGTTCGTAGC---CC-------CCA...............................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GGCGTTCGTAGC---CC-------CCAT-----TTAGT....................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................GAACGCATTTCACAACTG..................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000
...AGGCGTTCGTAGC---CC-------CCAT-----TTAGTA...................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................................................ACGGTC---GTTGGTCGT-----------TAAGAACGCATT...........................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................GAACGCATTTCACAACTGGCAACA............................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AGTTTC-------ACGGTC---GTTGGTCGT-----------TAAG...................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...AGGCGTTCGTAGC---CC-------CCAT-----TTAG.....................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000
............................................CAGTTTC-------ACGGTC---GTTGGTC....................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000
..............................................GTTTC-------ACGGTC---GTTGGTC....................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000
........TTCGTAGC---CC-------CCAT-----TTAG.....................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010
.............................................AGTTTC-------ACGGTC---GTTGGT.....................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000001000
.......GTTCGTAGC---CC-------CCAT-----TTAGT....................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
.............................................................GTC---GTTGGTCGT-----------TAAGAACG...............................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100
..........................................ATCAGTTTC-------ACGGTC---GTTGGTCGT-----------TAAG...................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002
..........................................................ACGGTC---GTTGGTCGT-----------TAAGAACG...............................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................CAGTTTC-------ACGGTC---GTTGGTCGT-----------TG.....................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.........................................................................................................................................................TTTCG-AAAC-----------------T-----------------AACGATGAAACC............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................C---GTTGGTCGT-----------TAAGAACGCATTT..........................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TTC-------ACGGTC---GTTGGTCGT-----------TAAGAACG...............................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................AAGAACGCATTTCACAACTGGCAA..............................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................ACGCATTTCACAACTGGCA...............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................C---GTTGGTCGT-----------TAAGAACG...............................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................GTTTC-------ACGGTC---GTTGGTCGT-----------TAA....................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................C-------CCAT-----TTAGTATCAGTTTC-------ACGGTC---GTT........................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........CGTAGC---CC-------CCAT-----TTAGTATCAGTTTC-------....................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TAAGAACGCATTTCACAACTGGCAACAA...........................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................GTTGGTCGT-----------TAAGAACGC..............................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................................AGTATCAGTTTC-------ACGGTC---GTTG.......................................................................................................................................................................2211.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AGTTTC-------ACGGTC---GTTGGTCGT-----------TAA....................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................AAACCAACAGCTGGCCAAACG............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AGTATCAGTTTC-------ACGGTC---GTTGG......................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................ACGGTC---GTTGGTCGT-----------TAAGAACGC..............................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................................................................GTTGGTCGT-----------TAAGAACGCAT............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CAT-----TTAGTATCAGTTTC-------ACGGT...............................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
...AGGCGTTCGTAGC---CC-------CCAT-----TTAGT....................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................GCATTTCACAACTGGCAACAA...........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................C-----------------T-----------------AACGATGAAACCAACAGCT.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................CGATGAAACCAACAGCTGGCC.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................GTTGGTCGT-----------TAAGAACGCATT...........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TTCACAACTGGCAACAATTAAGCC--A.................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TAAGAACGCATTTCACAACTGGCAA..............................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GAGGCGTTCGTAGC---CC-------CCAT-----TTAG.....................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........CGTAGC---CC-------CCAT-----TTAGTATCAGTTTC-------A...................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................ATTAAGCC--AAATTAATTGTATTGA..................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TAAGAACGCATTTCACAACTGGCAACA............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CAGTTTC-------ACGGTC---GTTGGTCGT-----------TAA....................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..............................................GTTTC-------ACGGTC---GTTGGTCGT-----------TAAGAA.................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...AGGCGTTCGTAGC---CC-------CCAT-----TTAGTATCAG...............................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..................................................................................................................................................................C-----------------T-----------------AACGATGAAACCAACAGCTGGCC.................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CCAT-----TTAGTATCAGTTTC-------ACGGTC---GT.........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.CGAGGCGTTCGTAGC---CC-------CCAT-----T........................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........................................ATCAGTTTC-------ACGGTC---GTT........................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................ATCAGTTTC-------ACGGTC---GTTGGTCGT-----------TAA....................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................GTC---GTTGGTCGT-----------TAAGAACGCATTTCA........................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................C---GTTGGTCGT-----------TAAGAACGCATT...........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.............................................AGTTTC-------ACGGTC---GTTGGTC....................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..............................AT-----TTAGTATCAGTTTC-------AC..................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................AGCC--AAATTAATTGTATTGAA--TTC--G.........................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TATTGAA--TTC--GCAGTTTTCG-AAAC-----------------..........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TTAGTATCAGTTTC-------ACGGTC---G..........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................CGT-----------TAAGAACGCATTTCACAA.....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................ATCAGTTTC-------ACGGTC---GTTGGT.....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
..........................................ATCAGTTTC-------ACGGTC---GTTG.......................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..............................................................TC---GTTGGTCGT-----------TAAGAACG...............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.............................................................GTC---GTTGGTCGT-----------TAAGAACGCA.............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
...........................................TCAGTTTC-------ACGGTC---GTTGGTCG...................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................CC-------CCAT-----TTAGTATCAGTTTC-------ACGGT...............................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TTAATTGTATTGAA--TTC--GCA.......................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................GGTC---GTTGGTCGT-----------TAAGAACGC..............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................C-------ACGGTC---GTTGGTCGT-----------TAT....................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................CGT-----------TAAGAACGCATTTCACAACTGGC................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CGAGGCGTTCGTAGC---CC-------CCAT-----TTAG.....................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TAAGAACGCATTTCACAACTGGC................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......CGTTCGTAGC---CC-------CCAT-----TTAGT....................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................................AACGATGAAACCAACAGCT.....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................GTTGGTCGT-----------TAAGAACGCA.............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................TTCG-AAAC-----------------T-----------------AACGATGAAACCAACAGC......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................ATGAAACCAACAGCTGGCCAAACGGG..........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................CGT-----------TAAGAACGCATTTCACAACTGGCA...............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TTAGTATCAGTTTC-------ACGGTC---GTTGG......................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................................................................................................................T-----------------AACGATGAAACCAACAGCT.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CCGAGGCGTTCGTACC----C-------CTAT----AACAGTATCGGTTTC-------ACGATC---GTTAGTCGT-----------TAAGAACGCATTTCCCAACTGGCTACAATTAGGCC--GAATTAATTGTTTTTAA--TTC--GTAGTTTCTG-AAAC-----------------T-----------------AACGATGCAACCAACAGCTGGCCAAACGAGTTTT-CTGGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................ACAGTATCGGTTTC-------ACGAT...............................................................................................................................................................................1912.0020000200
............................................CGGTTTC-------ACGATC---GTTAGTCGT-----------TAAGAAC................................................................................................................................................2911.0011000000
....................................AACAGTATCGGTTTC-------ACGATC---...........................................................................................................................................................................2111.0010000010
.................................................................................................................................AATTGTTTTTAA--TTC--GTAGT.....................................................................................2011.0011000000
.......................................................................................................................................TTTTAA--TTC--GTAGTTTCTG-AAA............................................................................2211.0010000100
...........................................................................T-----------TAAGAACGCATTTCCCAACTGGCT...............................................................................................................................2511.0010000100
.......................................................................GTCGT-----------TAAGAACGCATTTCCCAACTGGC................................................................................................................................2811.0011000000
..................................................................................................................................................................C-----------------T-----------------AACGATGCAACCAACAGCTGGC..................2411.0011000000
.........................................................................................................................................................TTCTG-AAAC-----------------T-----------------AACGATGCAACCAACAGCT.....................2911.0010000100
...............................T----AACAGTATCGGTTTC-------ACGATC---GTT........................................................................................................................................................................2511.0010000100
.................................................................................................................................................................AC-----------------T-----------------AACGATGCAACCAACAGCTGGC..................2511.0010100000
...........GTACC----C-------CTAT----AACAGTATCGGTTTC-------AC..................................................................................................................................................................................2711.0010010000
...........GTACC----C-------CTAT----AACAGTATCGGTTTC-------ACG.................................................................................................................................................................................2811.0011000000
.........................................................................................................................................................TTCTG-AAAC-----------------T-----------------AACGATGCAA..............................2011.0011000000
.............................................GGTTTC-------ACGATC---GTTAGTCGT-----------T......................................................................................................................................................2211.0011000000
..........................................................................................GAACGCATTTCCCAACTGGCT...............................................................................................................................2111.0010001000
droYak3
CCGAGGCGTTCGTACC----C-------CTACATATATCATTATCAGTTTC-------ACGATCC--GTTGGCCGT-----------TAAGAACGCATTTCACAACTGGCCACAATTAAGCC--GAATTAATTGTTTTGAA--TTC--GTAGTTTCTG-TAAC-----------------T-----------------AACGATGAAACCAACAGCTGGCCAAACGGGTTTT-CTAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................ACGATGAAACCAACAGCTGG...................2011.00100010000000
.................................................................................................................................................................AC-----------------T-----------------AACGATGAAACCAACAGCTGGCC.................2611.00100100000000
..........................................ATCAGTTTC-------ACGATCC--GTTGGC.....................................................................................................................................................................2211.00100000010000
...........................................................................................................................................................CTG-TAAC-----------------T-----------------AACGATGAAACC............................2011.00100100000000
........................................................................................................................................................................................................CGATGAAACCAACAGCTGGCC.................2111.00100100000000
..............................................................................................................................................................................................................AACCAACAGCTGGCCAAACGGGT.........2311.00100010000000
.................................................................................................................................................................AC-----------------T-----------------AACGATGAAACCAACAGCTG....................2311.00100010000000
................................................TTC-------ACGATCC--GTTGGCCGT-----------T......................................................................................................................................................2011.00100100000000
............................................................................................ACGCATTTCACAACTGGCC...............................................................................................................................1911.00100100000000
..................................................................................................................................................................C-----------------T-----------------AACGATGAAACCAACAGCTGGCCAAAC.............2911.00100100000000
............................................................................................................................................A--TTC--GTAGTTTCTG-TAAC-----------------T-----------------........................................1911.00110000000000
.............................................................ATCC--GTTGGCCGT-----------TAAGAACGC..............................................................................................................................................2211.00100100000000
.........................................................................................................................................................................................................GATGAAACCAACAGCTGGCCAAAC.............2411.00100100000000
......................................................................................................................................................................................................AACGATGAAACCAACAGCTGGC..................2211.00100010000000
....................................................................................................................TAAGCC--GAATTAATTGTTTTGA..................................................................................................2211.00100100000000
.............................................AGTTTC-------ACGATCC--GTTGGC.....................................................................................................................................................................1911.00100010000000
....................................................................................................................................................................................T-----------------AACGATGAAACCAACAGCTGGCCAAAC.............2811.00100100000000
..................................................................................................................................................................C-----------------T-----------------AACGATGAAACCAACAGCT.....................2111.00100000010000
..............................................................................................................................ATTAATTGTTTTGAA--TTC--GT........................................................................................2011.00100000010000
................................................TTC-------ACGATCC--GTTGGCCGT-----------TAA....................................................................................................................................................2211.00100100000000
.....................................................................................................................AAGCC--GAATTAATTGTTTTGAA--TTC--..........................................................................................2511.00100000010000
..............................................GTTTC-------ACGATCC--GTTGGCCG...................................................................................................................................................................2011.00100100000000
...............................................................CC--GTTGGCCGT-----------TAAGAACGC..............................................................................................................................................2011.00100100000000
.........................................................................................................................................TGAA--TTC--GTAGTTTCTG-TAAC-----------------T-----------------........................................2211.00100100000000
.............................................AGTTTC-------ACGATCC--GTTGGCC....................................................................................................................................................................2011.00100000100000
.........................................................................................................................................................................................................GATGAAACCAACAGCTGGC..................1911.00100100000000
..................................ATATCATTATCAGTTTC-------ACGATCC--GTT........................................................................................................................................................................2711.00100000010000
............................................................GATCC--GTTGGCCGT-----------TAAGAACGCATT...........................................................................................................................................2611.00110000000000
.....................................................................................................................AAGCC--GAATTAATTGTTTTGAA--TTC--G.........................................................................................2611.00100100000000
...............................................TTTC-------ACGATCC--GTTGGCC....................................................................................................................................................................1811.00110000000000
..................................................................................................TTCACAACTGGCCACAATTAAGC.....................................................................................................................2311.00101000000000
droEug1
CCTAGGCGTCCGCACC---TA-------ACAT----AT-----CCAGTTCCAGAGACCACAATCG--TTTGGACGA-----------TAAGAACGCATTTCACAA-------CGATTAAGTC--GAATTAATTGTTTAGAA--TTC--GTAGTTCGGA-AAACTACAAATT----------------------AAAACAAAAATGAAACCAACATCTGGCCAAACCAGTTTT-CTGGCSizeHit CountTotal NormTotal
No Reads
droBia1
CCAAGGCGTCCGTACC----C-------CTAT----AT------CAGCCGCATAGAACCCGATC---GCCGGTCGA-----------TAAGAACGCATTTCACAACTGGCGACGATTAAGTC--GAATTAATTGTTTTAAATAGTTTGGTAGTTTGGA-GAAC-----------------T-----------------GAAAATGAAACCAACATCTGGGCAAACGAGTTTT-CTGGCSizeHit CountTotal NormTotal
No Reads
droTak1
CCAAGGCGTCCGCACCTACCC-------CTAT----AT------TAGCTCCATAGAGTACGATC---GTCGGTCGA-----------TAAGAACGCATTTCACAACTGGCAACGATTAAGTC--AAATTAATTGTTTGGAA--TTA--GTAGTTTGGA-AAAC-----------------T-----------------GAAAATGAAACCAACAGCTGGCCAAACGAGTTTT-CTGGCSizeHit CountTotal NormTotal
No Reads
droEle1
CCAAGGCAGTCGTACC----CGTATAGCGTAT----AT------CAGCTGCATAGAACAAAACC---GCTGGCCGA-----------TAGGAACGCACTTCACAGCTGTCGCGAATTAA------------------------TTC--ATAGTTTGGA-AATC-----------------G-----------A-----AAAAATGAAACAAAAAGCTGGCCACACCAGTTAT-CTAGCSizeHit CountTotal NormTotal
No Reads
droRho1
CCAAGGCGACAGTACC----C-------ATAC----AT------CAGCTCCATAGAACACAGTC---GCCGGCCGA-----------TAAGAACACAGTTCCCAAGTGGCAACAATTAAGTG--GAATTAATTGTTTAGAA--ATC--ATAGTCCGAA-AATC-----------------G-----------G-----AAAAATGAGACCAACAGCTGGCCAAACACGTTTT-GTGGCSizeHit CountTotal NormTotal
No Reads
droFic1
CCAAAGTGTTCGC-----------------AT----AT------CAGCTCCACAAAATACGATC---GGCGGCTGA-----------TGGGAACGCATTCAACAGCTGGACAGAATTAAGTG--GAAATAAATGTCTAGAA--TTT--GTCGTTTTTA-AATC-----------------G-----------G-----AAAAATGAAACTAACCCCGCGCCAAACGAGTTTT-CTGGCSizeHit CountTotal NormTotal
No Reads
droKik1
CGAAGGCGTGCGTATC----GA------TGAT----AG------CAGCTTCTGGGAACACCACCGTTTGGGTTTGATAACAATAAAGAACACGCGTATTTCACAACTAATGACAATTAAGTC--CCATTAATTGGCTGGAA--TTT--GTGGCTCGAA-GAAC-----------------G---------GA------TAAAATGAAGCCAACAGGTGGTCAAACGAGTTTC-CTGGGSizeHit CountTotal NormTotal
No Reads
droAna3
G-----CGTTCGA-----------------AT----AG------CAGCTCCACGTAAAACGTTC---GCCAACAAA-----------CATAATCGTATTCCATATTTGG-----ATTA------GTCTTAATTATATAGAA--TTC--AAAGTTTATA-AGAC-----------------G-----------CAA---AACAATGCAGCTAACAAGTGGCCGGACAGGTTTT-CTGGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................TTTATA-AGAC-----------------G-----------CAA---AACAATGCAGCT............................2611.001010000
...............................T----AG------CAGCTCCACGTAAAACGTTC---G..........................................................................................................................................................................2411.001100000
........................................................................................................................................................................................................CAATGCAGCTAACAAGTGGCC.................2111.001010000
................................................................................................................................................TC--AAAGTTTATA-AGAC-----------------G-----------CAA---AACAA...................................2511.001010000
........................................................................................ATAATCGTATTCCATATTTGG-----ATT.........................................................................................................................2411.001010000
..................................................CACGTAAAACGTTC---GCCAACAAA-----------C......................................................................................................................................................2411.001010000
..................................................CACGTAAAACGTTC---GCCAACAAA-----------.......................................................................................................................................................2311.001010000
........TTCGA-----------------AT----AG------CAGCTCCACGT.......................................................................................................................................................................................2011.001000001
......................................................................................................................................................................................................AACAATGCAGCTAACAAGTGGCC.................2311.001010000
.........................................................................................................................................................................................................AATGCAGCTAACAAGTGGCC.................2011.001010000
...........................................................................................................................................................ATA-AGAC-----------------G-----------CAA---AACAATGCAGCC............................2311.001010000
.........................................................................................................................................................TTATA-AGAC-----------------G-----------CAA---AACAATGC................................2111.001001000
droBip1
C---------------------------------------------------------------------------------------------GTATTCCATAATTGGATACGGCTAATTA--TTCCAATTTATATCGAA--ATC--AAAGTTTATA-AAAC-----------------G-----------C---AAAAAAATGCAGCTAACAGGCGGCCGAACAGGTTTT-CTTGCSizeHit CountTotal NormTotal
No Reads
dp5
CCAACGCGGGAATATC----GATAGA----AC----AT------CAGCTGGA---ACTACAACA---AGCCA--CA--------TACAAACATTCTATTTCACAACTGGCAGCGATTAGCCCCCCAGTTATTCGTGTATAA--TTC--CAACATTCGGAACAC-----------------C-----------CTGAACAGCCATGAAGTCATTGAGTTATAAAACAAGTTTC-GCGGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................CTACAACA---AGCCA--CA--------TACAAA....................................................................................................................................................2111.0010010000000
...........................................................................................................GGCAGCGATTAGCCCCCCA................................................................................................................1911.0010100000000
....................................AT------CAGCTGGA---ACTACAACA---AG.........................................................................................................................................................................2111.0010100000000
..............TC----GATAGA----AC----AT------CAGCTGG...........................................................................................................................................................................................1911.0010000100000
................................................................................................................................................TC--CAACATTCGGAACAC-----------------C-----------CT............................................2011.0010100000000
............TATC----GATAGA----AC----AT------CAGCTGGA---.......................................................................................................................................................................................2211.0010100000000
....................................AT------CAGCTGGA---ACTACAACA---AGCCA--C...................................................................................................................................................................2511.0010010000000
droPer2
CCAACGCGGGAATATC----GATAGA----AC----AT------CAGCTGGA---ACTACAACA---AGCCA--CA--------TACAAACATTCTATTTCACAACTGGCAGCGATTAGGCCCCCAGTTATTCGTGTATAA--TTC--CAACATTCGGAACAC-----------------C-----------CTGAACAGCCATGAAGTCATTGAGTTATAAAACAAGTTTC-GCGGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................C----AT------CAGCTGGA---ACTACAACA---AGCCA--C...................................................................................................................................................................2617.007700000
.............ATC----GATAGA----AC----AT------CAGCTGGA---.......................................................................................................................................................................................2116.006600000
...........ATATC----GATAGA----AC----AT------CAGCTGGA---.......................................................................................................................................................................................2315.005500000
.........................................................................................................................................ATAA--TTC--CAACATTCGGAACAC-----------------C-----------CTGAAC........................................2915.005500000
....................................................................................................................................................CAACATTCGGAACAC-----------------C-----------CT............................................1814.004400000
..........................................................................................................................................................TCGGAACAC-----------------C-----------CTGAACAGCCATGAAGTC............................2814.004400000
...............C----GATAGA----AC----AT------CAGCTGGA---.......................................................................................................................................................................................1914.004400000
...........................................................................................................................................................CGGAACAC-----------------C-----------CTGAACAGCCATG.................................2213.003300000
...............................C----AT------CAGCTGGA---ACTACAACA---AGCC.......................................................................................................................................................................2413.003300000
....................................................................................................................................................CAACATTCGGAACAC-----------------C-----------CTGAACAGC.....................................2513.003300000
.................................................................................................................................................C--CAACATTCGGAACAC-----------------C-----------CTGAACAGC.....................................2613.003300000
........................................................................................................................................................ATTCGGAACAC-----------------C-----------CTGAACAGC.....................................2113.003300000
.......................................................................................................................................................CATTCGGAACAC-----------------C-----------CTGAACAGCCATGAA...............................2813.003300000
.....................................................................................................................................................AACATTCGGAACAC-----------------C-----------CTGA..........................................1913.003300000
.....................ATAGA----AC----AT------CAGCTGGA---ACT....................................................................................................................................................................................2012.002200000
...............C----GATAGA----AC----AT------CAGCTGGA---ACT....................................................................................................................................................................................2212.002200000
.................................................................................................................................................C--CAACATTCGGAACAC-----------------C-----------CT............................................1912.002200000
....................................................................................................................................................CAACATTCGGAACAC-----------------C-----------CTGAACAGCCAT..................................2812.002200000
............................................................................................................................................................GGAACAC-----------------C-----------CTGAACAGCC....................................1812.002200000
.........GAATATC----GATAGA----AC----AT------CA................................................................................................................................................................................................1912.002200000
..........................................................................................................................................................................................................................ATAAAACAAGTTTC-GCGGC1912.002200000
..AACGCGGGAATATC----GATAGA----AC----..........................................................................................................................................................................................................2212.002000002
....................................................................................................................................................CAACATTCGGAACAC-----------------C-----------CTGAACAGCC....................................2612.002200000
.........................................................................................................................................................TTCGGAACAC-----------------C-----------CTGAACAGCCAT..................................2312.002200000
......CGGGAATATC----GATAGA----AC----..........................................................................................................................................................................................................1811.001100000
................................................................................................................................TATTCGTGTATAA--TTC--CAACATTC..................................................................................2411.001010000
............................................................................................................................................A--TTC--CAACATTCGGAACAC-----------------C-----------CTGAACAGC.....................................2911.001100000
.....................................................................................................................................................AACATTCGGAACAC-----------------C-----------CTGAACAGCC....................................2511.001100000
............................................................................................................................................A--TTC--CAACATTCGGAACAC-----------------C-----------CTGAACAG......................................2811.001100000
.........................................................................................................................................................................................................CATGAAGTCATTGAGTTATAAAAC.............2411.001000001
....................................AT------CAGCTGGA---ACTACAACA---AGCCA--C...................................................................................................................................................................2511.001100000
........................................................................................................................................................ATTCGGAACAC-----------------C-----------CTGAACAGCCATGAA...............................2711.001100000
........................GA----AC----AT------CAGCTGGA---ACTACAACA---AGCCA--C...................................................................................................................................................................2911.001100000
....................................................................................................................................................CAACATTCGGAACAC-----------------C-----------CTGAACAG......................................2411.001100000
..............................................................................................................................................................AACAC-----------------C-----------CTGAACAGCCATGAA...............................2111.001001000
...........ATATC----GATAGA----AC----AT------CAGCTGGG---.......................................................................................................................................................................................2311.001100000
..................................................................................................................................................................................................GAACAGCCATGAAGTCATT.........................1911.001001000
.........................A----AC----AT------CAGCTGGA---ACTACA.................................................................................................................................................................................1911.001001000
...........................................................................................................................................................CGGAACAC-----------------C-----------CTGAACAGCCATGAAGT.............................2611.001100000
..............TC----GATAGA----AC----AT------CAGCTGGA---AC.....................................................................................................................................................................................2211.001100000
..............................AC----AT------CAGCTGGA---ACTACAACA---AGCCA--CA--------..........................................................................................................................................................2811.001100000
.......................AGA----AC----AT------CAGCTGGA---ACTACAACA---AG.........................................................................................................................................................................2611.001100000
.........GAATATC----GATAGA----AC----AT------C.................................................................................................................................................................................................1811.001100000
.....GCGGGAATATC----GATAGA----AC----AT------CAG...............................................................................................................................................................................................2411.001010000
.CAACGCGGGAATATC----GATA......................................................................................................................................................................................................................1911.001001000
...............................C----AT------CAGCTGGA---ACTACAACA---AGC........................................................................................................................................................................2311.001001000
....................................................................................................................................................CAACATTCGGAACAC-----------------C-----------CTGAAC........................................2211.001100000
...........................................................................................................................................................CGGAACAC-----------------C-----------CTGAACAGC.....................................1811.001100000
............................................................................................................................................A--TTC--CAACATTCGGAACAC-----------------C-----------CTGAACA.......................................2711.001100000
.....................................................................................................................................................AACATTCGGAACAC-----------------C-----------CTGAACAGC.....................................2411.001100000
........................................................................................................................................................ATTCGGAACAC-----------------C-----------CTGAACAGCCATGAAGT.............................2911.001100000
........................................................................................................................................................ATTCGGAACAC-----------------C-----------CTGAACAGCC....................................2211.001100000
droVir3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACCAGTTTC-ATAGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
G----------------------------------------------------------------------------------------------CATTTCACAACA--CAATCATTAGTTG--CAGCTATTAGTATTTGA--TTA--GCTATAT------AT-------TGTGATTAAGAGCAGTAACTAT------CGGAATGTCCCCCTCGGACCGCAGAACCAGTCTCACTGGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................ATAT------AT-------TGTGATTAAGAGC.......................................................1911.001000001
.......................................................................................................................................................ATAT------AT-------TGTGATTAAGAGCA......................................................2011.001000001
..............................................................................................................................................................................ATTAAGAGCAGTAACTAT------CGGAAT..................................2411.001000001
.................................................................................................................................................A--GCTATAT------AT-------TGTGATTAAGAGC.......................................................2311.001100000
droGri2
AATC-----------------------------------------------------------T---AGCGAGTGT-----------TCAAAGTGAATTTTAGAACAATCAACAATTAATTG--CTTTTATT-ATTATTATTATTC----CGATATTG-TGCT-------------TAACAA--AGAACAAA------ACAAATGTCGCAATCAAGTAGTAAGACTGGTTTC-ATTGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................ATTC----CGATATTG-TGCT-------------TAACAA--AGAAC.................................................2720.50110
....................................................................................................................................................................................AA--AGAACAAA------ACAAATGTCGCA............................2220.50110

Generated: 05/18/2015 at 04:08 PM