ID:

dsi_22908

 Coordinate:

2r:6811290-6811575 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-38.0 -37.7 -37.7

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DNAREP1_DYakRCHelitron+
mature
star
  1. dsi_22908  2r:6811294-6811308 -
  2. 2r:11042519-11042533 -
  3. 3l:9339751-9339765 -
  4. node_26715:459-473 -
  5. node_54696:902-916 -
  6. node_70661:5344-5358 -
  7. node_26156:85-99 -

Sense Strand Reads

GGCCTTGAAACCGTACGACGTCAAGGACGTCATGGAGCAGTACGCAGCCGGTAAGTGGGAATTAAGGTCTAGATACATGAACCAAATAAATCTACTTACCAATAATAAAATTAAATTTAAGCCGTTATGAGCGTCTTAACAAACTTCAGCTCGGATTTTTAGATAACGACGTTTATACGGACAGACATACGGACATGGTCAGATGGACATAACCATCTATCTGTTTAATATTTTTCAATACATTACAGATAGATTACGAATGGGATAGTTAAAATACTTATAATATATATATAACCCCTTGTACCACCTTCTATAAATGCAATTTGTATATTTTAGGTCACGTGGACTTGTTGGGTCGCGTTAAAATGCTACACTTGCGGTAAGAA
**************************************************************************...............................................((((.((((((((((((..(((..((......))..)))...))).)))))))))))))......((((((((((....(((.((........((((((((((....((((....))))....))))))))))(((((..(((.((..((................))..)).))).)))))...)).)))....)))...)))))))...****************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 M024
male body		 M025
embryo
 M023
head
 SRR618934
dsim w501 ovaries
 M053
female body
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
.................................................................................................................................................................................................................................................................................GTACTTATGATATATATATA............................................................................................. 20 2 12 6.75 81 81 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TAGATACATGAACCAAATAAC........................................................................................................................................................................................................................................................................................................ 21 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0
....TTGAAACCGTACGACGTCAAGGACG..................................................................................................................................................................................................................................................................................................................................................................... 25 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................GTACTTATGATATATATAT.............................................................................................. 19 2 20 1.35 27 27 0 0 0 0 0 0 0 0 0 0 0 0
......................AAGGACGTCATGGAGCAGTACGCAGC.................................................................................................................................................................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........AACCGTACGACGTCAAGGAC...................................................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................ACGTGGACTTGTTGGGTCGC........................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......GAAACCGTACGACGTCAAGGAC...................................................................................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....TGAAACCGTACGACGTCAAGGAC...................................................................................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......AAACCGTACGACGTCAAGGAC...................................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................ACATGAACCAAATAAATCTACT.................................................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
............GTACGACTTCAAGGACGT.................................................................................................................................................................................................................................................................................................................................................................... 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................CGTTCACTTGTTGGGTCG............................ 18 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.................ACGTGAAGGTCGTCATGGA.............................................................................................................................................................................................................................................................................................................................................................. 19 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................TGTTGGGTCGGTTTAAAA.................... 18 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................CTTGTTGGATAGCGTTATAA.................... 20 3 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................GACGGACAGACATACGGACATGGAC.......................................................................................................................................................................................... 25 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................................................................................................................................TGCAATTTGTATATT...................................................... 15 0 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................TACGAACAAACATACGGACAT.............................................................................................................................................................................................. 21 2 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................GGTAAGGGGGAATTA.................................................................................................................................................................................................................................................................................................................................. 15 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................TATTAGCGCCTTATCAAACT................................................................................................................................................................................................................................................. 20 3 8 0.13 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................GTAGACCACGACGTTTATA................................................................................................................................................................................................................. 19 3 15 0.07 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.............TACGACGTCATGGACTT.................................................................................................................................................................................................................................................................................................................................................................... 17 2 16 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................TACGGACAGACATACAGAC................................................................................................................................................................................................ 19 1 18 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................................................................CGATTACGAATGGGA......................................................................................................................... 15 1 18 0.06 1 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................................................TATTCCAGATAGATTACTA............................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................................................................................................................................................................................TAACCCGTTGAACCTCCT............................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................ACAGGACGTCATGGAG............................................................................................................................................................................................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

CCGGAACTTTGGCATGCTGCAGTTCCTGCAGTACCTCGTCATGCGTCGGCCATTCACCCTTAATTCCAGATCTATGTACTTGGTTTATTTAGATGAATGGTTATTATTTTAATTTAAATTCGGCAATACTCGCAGAATTGTTTGAAGTCGAGCCTAAAAATCTATTGCTGCAAATATGCCTGTCTGTATGCCTGTACCAGTCTACCTGTATTGGTAGATAGACAAATTATAAAAAGTTATGTAATGTCTATCTAATGCTTACCCTATCAATTTTATGAATATTATATATATATTGGGGAACATGGTGGAAGATATTTACGTTAAACATATAAAATCCAGTGCACCTGAACAACCCAGCGCAATTTTACGATGTGAACGCCATTCTT
******************************************************...............................................((((.((((((((((((..(((..((......))..)))...))).)))))))))))))......((((((((((....(((.((........((((((((((....((((....))))....))))))))))(((((..(((.((..((................))..)).))).)))))...)).)))....)))...)))))))...************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 M025
embryo
....AAATTTGGCATGCTG............................................................................................................................................................................................................................................................................................................................................................................... 15 1 3 38.67 116 116 0 0 0 0 0
...CAAATTTGGCATGCTG............................................................................................................................................................................................................................................................................................................................................................................... 16 2 17 35.94 611 611 0 0 0 0 0
..AGAAATTTGGCATGCTGC.............................................................................................................................................................................................................................................................................................................................................................................. 18 2 1 1.00 1 0 0 0 1 0 0
.........................CTGGAATACCTCATCATGCGT.................................................................................................................................................................................................................................................................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0
....................................................................................................................................................................................................................................................................ACCCTCTCATTTTTATGAACAT........................................................................................................ 22 3 1 1.00 1 0 0 0 0 1 0
.......TTTGGCATGCTGCAGTTCCTG...................................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
..GCAAATTTGGCATGCTG............................................................................................................................................................................................................................................................................................................................................................................... 17 2 7 0.71 5 5 0 0 0 0 0
CCTCAAATTTGGCATGCTG............................................................................................................................................................................................................................................................................................................................................................................... 19 3 7 0.43 3 3 0 0 0 0 0
............................................................................................................................................................................................................CCTCTATTGGTCGATAGA.................................................................................................................................................................... 18 2 3 0.33 1 0 1 0 0 0 0
..TGAAATTTGGCATGCTG............................................................................................................................................................................................................................................................................................................................................................................... 17 2 9 0.22 2 2 0 0 0 0 0
....AATTTTGGCATGCTG............................................................................................................................................................................................................................................................................................................................................................................... 15 1 9 0.11 1 1 0 0 0 0 0
...........................................................................................................................................................AAACATCTGTTGCCGCAAAT................................................................................................................................................................................................................... 20 3 9 0.11 1 1 0 0 0 0 0
..GTAAATTTGGCATGCTG............................................................................................................................................................................................................................................................................................................................................................................... 17 2 17 0.06 1 1 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................CATGATGGATGATACTTAC................................................................... 19 3 17 0.06 1 0 0 0 0 0 1
.............................................................................................................................................................................................................CGGTATCGGTAGCTAGACAA................................................................................................................................................................. 20 3 17 0.06 1 0 0 0 0 0 1
...........................................................................ATACTTGGTTCATTTAG...................................................................................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 1 0 0 0
........................................................................................................................................................................................................................................................................................................................................................CTGAACAACTCAGGGCAAC....................... 19 3 20 0.05 1 0 0 0 1 0 0
...................................................................................................................................................................TTTGCTGCAAGTATGCCTGT........................................................................................................................................................................................................... 20 2 20 0.05 1 1 0 0 0 0 0
...CAATTTTGGCATGCTG............................................................................................................................................................................................................................................................................................................................................................................... 16 2 20 0.05 1 1 0 0 0 0 0
.................................................................................................TGGTTATTTTTTTAAT................................................................................................................................................................................................................................................................................. 16 1 20 0.05 1 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:6811240-6811625 - dsi_22908 -----GGCCTTGAAACCGTACGACGTCAAGGACGTCATGGAGCAGTACGCAGCCGGTAAGTGGGAATT----AAGGTCTAGATACATG--------AACCAAATAAA-TCTAC--------TTACCA-------ATA-ATAAAATTAAATTTAAGCCGTTATGAGCGTCTTAACAAACTTCAGCTCGGATTTTTAGATAACGACGTTTATACGGACAGACATACGGACATGGTCAGATGGACATA--------------ACC----------------------------------------------------------------------------------------AT------------C-----------------------TATCTGTTTAATATTTTTCAATACATTACAGA-------------------------TAGATTACGAATG--------------------GGATAGTTAAAATACTTATAATATATATATAACCCCTT---G-------------------------------TACCACCTTCTATAAATG-CAATTTGTATA-TTTTAGGTCACGTGGACTTGTTGGGTCGCGTTAAAATGCTACACTTGCGGTAAGAA------
droSec2 scaffold_1:3651171-3651537 - -----GGCCTTGAAACCCTACGACGTCAAGGACGTCATGGAGCAGTACGCAGCCGGTAAGTGGGAATT----AAGGTCTAGATACATG--------AACCAAATAAA-TCTAC--------TTACCA-------ATA-TTAAAATTAAATTTAAGCCGTTATGAGCGTCTTAACAAACTTAAGATCAGGTTTTTAGATAACCACGTTTATACGGAC------------ATG----------------------------GCC----------------------------------------------------------------------------------------AT------------C-----------------------TATCTATTTTATATTTTTCAATACATTACAGA-----------------CATAAGTTTAGATTACGAATG--------------------GGATGGTTAAAATTCTGATAATATATATA-AACCTTTT---T-------------------------------TATCACCTCCTATAAATG-CAATTTGTATA-TTTTAGGTCACGTGGACTTGTTGGGTCGCGTTAAAATGCTACACTTGCGGTAAGAA------
dm3 chr2R:6035144-6035474 - -----GGCCTTGAAGCCCTACGACGTCAAGGACGTCATGGAGCAGTACGCAGCCGGTAAGCGGTAATTAATTAAGATCTAGATACACG--------AACAAAAAAAA-TCGAC--------TTAACA-------GTA-ACAAAATTACATTTACGCCGTTATGGGCGTCTTAAAGAACTTAAGCTCAGGTTTTTCGATTACGAT------AC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTTTTAAACTTTTCAATATATTACA------------------------------------AACG--------------------GGATAGTTAAAATACTTATAATATATATA-AACCTTTA---G-------------------------------TACCACCTTCTCTTAATA-CGATTTGTATA-TTTTAGGTCACGTCGACTTGTTGGGTCGCGTTAAAATGCTACACTTGCGGTAAGAA------
droEre2 scaffold_4770:320873-321031 + -----CATCTCAACATTTTAGCTTTT--GTAGTTCCTGAGAACGAGG------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTCATACGGACAGATGGACGGACATGGCCAGATCGACTCG--------------ACC----------------------------------------------------------------------------------------AT--------TGAT-CCTGATCAAGAATATATATACTATAT----------------------------A-------------------------TATATTATATACT----------------------ATA-CTATATTACATATAGTATATATA---------------------------------------------------------------------------------------------------------------------------------CA------
droYak3 2L:18668060-18668371 - TTGTGGGCGTTATAGTTTTCTAACTCCAACAGTTTCCGAGAACACGACG------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATACGGACGGGCAAACGGACATAACCAGATCGACTGTTACATATGTACTTTGCA----------------------------------------------------------------------------------------AT------------A-----------------------TATACATTATATACCCT----------AAGGGTACAATAAGAGAAGAATCATTAATTTAGATTAAGGAAGGTAAAAAAACATCATTTTTAGTATAGCTAAAATAATGTTAATATACATT-TACCTTTC---C-------------------------------TACCAAATTATCTAAAAA-CAATTTGTATA-TTTAAGGTCACGTGGACTTGCTGGGTCGCGTTAAAATGCTACACTTGCGGTAAGAA------
droEug1 scf7180000409209:145351-145435 + -----GGCCTTGAAACCTTACGACGTCAAGGATGTTATGGAGCAATATGCAGCCGGTAAGTGGAATTC----AGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTAATGGATTAGATTAA----------------------------
droBia1 scf7180000301754:295929-296055 + -----ATAGTT------TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAATTGTTTTAATATTTCTC---------------------------------TTCTCCTTTTGCATTGTCATATCTAAGTAACAAATCTTTTA-TTTAAGGACATGTGGACTTGTTGGGTCGCGTTAAAATGCTACATTTGCGGTGGGTA------
droTak1 scf7180000415363:195188-195261 + -----TAAATACAAACTCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-TTTAAGGTCATGTGGACTTGTTGGGTCGCGTTAAAATGCTTCATTTGCGGTGAGAA------
droEle1 scf7180000485948:768-850 + -----CCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCAATAATT-TATTTTTTCTA-TTTAAGGTCACGTTGACTTGTTGGGGCGCGTTAAAATGCTACATTTGCGGTGAGAA------
droRho1 scf7180000774573:19939-20042 + -----AGCCTTGAAACCCTACGATGTCAAGGATGTTATGGAGCAATATGCGGCCGGTAAGTGAAGA-----------CCAATTTCGTA--------AATTAGGTTTA-TCCAA--------TTACTG-------TTA-ATTAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454066:1691017-1691429 + -----GGCTTTGAAACCCTACGACGTCAAGGATGTCATGGAGCAATATGCCGCCGGTGAGTAAAAGTT----AAAAGCTACACCCAAA--------AATTAAAAAAAAAAGATTTGATGATTTATTACAAAGATATAAATATGGAAAAATA-------------------------------GTCAGGAATTTTTAAAAACTTCATCTACACAAGG------------------------AGTTTTACTTATGAACTCCATGAAACGCAACTTGACATATTTTTAAACATTTAAAAACAATTTACCTCAAAGAAGGCTTTAATTTACTAAAAGGTTTTTAATTTTTTTGAAATTATTACCCTTT-TCTTATTTAAA--ATATACAATTTTT----------------------------A-------------------------TCTCTTGTTTAGT----------------------AAG-C------------------------------------------------------------------------AATATCTATTTAAACATTTCTGTA-TTTCAGGGCACGTGGACTTGCTGGGTCGCGTTAAAATGCTACATTTGCGGTAAGA-------
droKik1 scf7180000302817:362772-363023 - -----GGCCTTGAAGCCCTACGACGTCAAGGATGTCATGGAGCAATATGCGGCCGGTGAGTTCGAGTC----ATAAATTATATTTAAAGTTCATTTAATAAAATTAA-TTAAT--------TAATTA-------ATAAATAAAAATAAATT-------------------------------GTCAAAAAAT-------------------------------------------------CATA--------------AAT----------------------------------------------------------------------------------------AATTGTTATCCTTT-TTATATTT------------------------AATTTTTATTAAT------------------------------------------------------------------------------------------ATAT------------AAA---------------------------------------------------ATACCATTATA-TTTCAGGACACGTTGACTTGTTAGGTCGCGTTAAAATGCTACATTTGCGGTAAGAA------
droAna3 scaffold_13266:4507191-4507253 - -----TTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATC-TTTTAGGTCATGTGGACTTGTTGGGTCGCGTAAAGATGCTACATCTGCGGTAAGTC------
droBip1 scf7180000395751:310584-310646 - -----AGCCCTGAAGCCCTACGATGTCAAGGATGTCATGGAGCAATATGCAGCAGGTGAGTGATATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 Unknown_group_824:4301-4403 - -----CCATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACTAGCTTCAAAACTTTATACCT--------------------------CTCTTTGCTCC-TTCTAGGCCACGTGGACCTGTTGGGTCGCGTTAAGATGCTTCATTTGCGGTGAGTCTGCCAA
droPer2 scaffold_2:7085614-7085668 - -----GGCCTTGAAGCCGTACGATGTCAAGGATGTCATGGAGCAGTACGCAGCTGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004382:53257-53315 + -----GGCCTTGAAACCGTACGATGTCAAGGATGTTATGGAGCAATATGCGGCAGGTACATTGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12875:15879829-15879880 - -----TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGGTCACGTGGATTTGCTGGGTCGCGTCAAGATGCTGCATTTGCGGTA----------
droMoj3 scaffold_6496:7907557-7907674 + -----CTTATAATCTATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTCTA------------------------TATACTTATATAT------------------------------------------------------------------------------------------ATGT------------AAA---------------------------------------TCAC--------TCCTCAACTGT-TTGCAGGTCATGTGGATCTATTGGGTCGCGTCAAAATGCTGCATTTGCGGTGCGTATACTTA
droGri2 scaffold_15245:12686369-12686436 - -----CAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTCATTTACAGGTCACGTGGACTTACTGGGGCGCGTCAAAATGCTGCACTTGCGGTAAGTA------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
-----GGCCTTGAAACCGTACGACGTCAAGGACGTCATGGAGCAGTACGCAGCCGGTAAGTGGGAATT----AAGGTCTAGATACATG--------AACCAAATAAA-TCTAC--------TTACCA-------ATA-ATAAAATTAAATTTAAGCCGTTATGAGCGTCTTAACAAACTTCAGCTCGGATTTTTAGATAACGACGTTTATACGGACAGACATACGGACATGGTCAGATGGACATA--------------ACC----------------------------------------------------------------------------------------AT------------C-----------------------TATCTGTTTAATATTTTTCAATACATTACAGA-------------------------TAGATTACGAATG--------------------GGATAGTTAAAATACTTATAATATATATATAACCCCTT---G-------------------------------TACCACCTTCTATAAATG-CAATTTGTATA-TTTTAGGTCACGTGGACTTGTTGGGTCGCGTTAAAATGCTACACTTGCGGTAAGAA------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................TAGATACATG--------AACCAAATAAC-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000000000000000
.........TTGAAACCGTACGACGTCAAGGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200200000000000000
...........................AAGGACGTCATGGAGCAGTACGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
.............AACCGTACGACGTCAAGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGGACTTGTTGGGTCGC.................................2011.00101000000000000000
...........GAAACCGTACGACGTCAAGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
..........TGAAACCGTACGACGTCAAGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
............AAACCGTACGACGTCAAGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
...................................................................................ACATG--------AACCAAATAAA-TCTAC--------T..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-CAATTTGTATA-TT............................................................1570.14100000010000000000
droSec2
-----GGCCTTGAAACCCTACGACGTCAAGGACGTCATGGAGCAGTACGCAGCCGGTAAGTGGGAATT----AAGGTCTAGATACATG--------AACCAAATAAA-TCTAC--------TTACCA-------ATA-TTAAAATTAAATTTAAGCCGTTATGAGCGTCTTAACAAACTTAAGATCAGGTTTTTAGATAACCACGTTTATACGGAC------------ATG----------------------------GCC----------------------------------------------------------------------------------------AT------------C-----------------------TATCTATTTTATATTTTTCAATACATTACAGA-----------------CATAAGTTTAGATTACGAATG--------------------GGATGGTTAAAATTCTGATAATATATATA-AACCTTTT---T-------------------------------TATCACCTCCTATAAATG-CAATTTGTATA-TTTTAGGTCACGTGGACTTGTTGGGTCGCGTTAAAATGCTACACTTGCGGTAAGAA------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCACGTGGACTTGTTGGGTCG..................................2311.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACGTGGACTTGTTGGGTCGC.................................2311.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGGACTTGTTGGGTCG..................................1911.0010010
dm3
-----GGCCTTGAAGCCCTACGACGTCAAGGACGTCATGGAGCAGTACGCAGCCGGTAAGCGGTAATTAATTAAGATCTAGATACACG--------AACAAAAAAAA-TCGAC--------TTAACA-------GTA-ACAAAATTACATTTACGCCGTTATGGGCGTCTTAAAGAACTTAAGCTCAGGTTTTTCGATTACGAT------AC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTTTTAAACTTTTCAATATATTACA------------------------------------AACG--------------------GGATAGTTAAAATACTTATAATATATATA-AACCTTTA---G-------------------------------TACCACCTTCTCTTAATA-CGATTTGTATA-TTTTAGGTCACGTCGACTTGTTGGGTCGCGTTAAAATGCTACACTTGCGGTAAGAA------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................AGGACGTCATGGAGCAGTACGCAGCCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGTCGCGTTAAAATGCTA.....................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010
.........................TCAAGGACGTCATGGAGCAGTACGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TACGAT------AC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTTTTAAAC..................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AGGACGTCATGGAGCAGTACGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACGTCGACTTGTTGGGTC...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGGTCGCGTTAAAAT.........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TGGAGCAGTACGCAGCCGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CATGGAGCAGTACGCAGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACGTCGACTTGTTGGGTCG..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTCGACTTGTTGGGT....................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTCAAGGACGTCATGGAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGGGTCGCGTTAAAA..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............................................................................................................................................................CGTTATGGGCGTCTTAAAGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGGGTCGCGTTAAAATGCTAA....................2511.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTTGGGTCGCGTTAAAATGC.......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................CGTCAAGGACGTCATGGAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATA-TTTTAGGTCACGTCGAC.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGGGTCGCGTTAAAA..........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTCACGTCGACTTGTTGGG.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................ATGGGCGTCTTAAAGAACTTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTACACTTGCGGTAAGA.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................TGGAGCAGTACGCAGCCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGTTAAAATGCTACACTTGCGC............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGGGTCGCGTTAAAAT.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GTACGCAGCCGGTAAGCGGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...................................CATGGAGCAGTACGCAGCCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
droEre2
-----CATCTCAACATTTTAGCTTTT--GTAGTTCCTGAGAACGAGG------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTCATACGGACAGATGGACGGACATGGCCAGATCGACTCG--------------ACC----------------------------------------------------------------------------------------AT--------TGAT-CCTGATCAAGAATATATATACTATAT----------------------------A-------------------------TATATTATATACT----------------------ATA-CTATATTACATATAGTATATATA---------------------------------------------------------------------------------------------------------------------------------CA------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................CATGGCCAGATCGACTCG--------------ACC----------------------------------------------------------------------------------------......................................................................................................................................................................................................................................................................................................2120.5011000000
.....................................................................................................................................................................................................................................TGGCCAGATCGACTCG--------------AC...............................................................................................................................................................................................................................................................................................................................................................................................18150.0710000010
droYak3
TTGTGGGCGTTATAGTTTTCTAACTCCAACAGTTTCCGAGAACACGACG------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATACGGACGGGCAAACGGACATAACCAGATCGACTGTTACATATGTACTTTGCA----------------------------------------------------------------------------------------AT------------A-----------------------TATACATTATATACCCT----------AAGGGTACAATAAGAGAAGAATCATTAATTTAGATTAAGGAAGGTAAAAAAACATCATTTTTAGTATAGCTAAAATAATGTTAATATACATT-TACCTTTC---C-------------------------------TACCAAATTATCTAAAAA-CAATTTGTATA-TTTAAGGTCACGTGGACTTGCTGGGTCGCGTTAAAATGCTACACTTGCGGTAAGAA------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCACGTGGACTTGCTGGGT....................................2114.00401000030000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTGGACTTGCTGGGTCGC.................................2114.00420000020000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCACGTGGACTTGCTGGGTCGC.................................2411.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCACGTGGACTTGCTGGGTC...................................2211.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTGGACTTGCTGGGTCGCG................................2211.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCACGTGGACTTGCTGGGTCG..................................2311.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCACGTGGACTTGCTGG......................................1911.00100000010000
................................................................................................................................................................................................................ATACGGACGGGCAAACGGACA...............................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100000010000
droEug1
-----GGCCTTGAAACCTTACGACGTCAAGGATGTTATGGAGCAATATGCAGCCGGTAAGTGGAATTC----AGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTAATGGATTAGATTAA----------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
-----ATAGTT------TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAATTGTTTTAATATTTCTC---------------------------------TTCTCCTTTTGCATTGTCATATCTAAGTAACAAATCTTTTA-TTTAAGGACATGTGGACTTGTTGGGTCGCGTTAAAATGCTACATTTGCGGTGGGTA------SizeHit CountTotal NormTotal
No Reads
droTak1
-----TAAATACAAACTCTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-TTTAAGGTCATGTGGACTTGTTGGGTCGCGTTAAAATGCTTCATTTGCGGTGAGAA------SizeHit CountTotal NormTotal
No Reads
droEle1
-----CCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCAATAATT-TATTTTTTCTA-TTTAAGGTCACGTTGACTTGTTGGGGCGCGTTAAAATGCTACATTTGCGGTGAGAA------SizeHit CountTotal NormTotal
No Reads
droRho1
-----AGCCTTGAAACCCTACGATGTCAAGGATGTTATGGAGCAATATGCGGCCGGTAAGTGAAGA-----------CCAATTTCGTA--------AATTAGGTTTA-TCCAA--------TTACTG-------TTA-ATTAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
-----GGCTTTGAAACCCTACGACGTCAAGGATGTCATGGAGCAATATGCCGCCGGTGAGTAAAAGTT----AAAAGCTACACCCAAA--------AATTAAAAAAAAAAGATTTGATGATTTATTACAAAGATATAAATATGGAAAAATA-------------------------------GTCAGGAATTTTTAAAAACTTCATCTACACAAGG------------------------AGTTTTACTTATGAACTCCATGAAACGCAACTTGACATATTTTTAAACATTTAAAAACAATTTACCTCAAAGAAGGCTTTAATTTACTAAAAGGTTTTTAATTTTTTTGAAATTATTACCCTTT-TCTTATTTAAA--ATATACAATTTTT----------------------------A-------------------------TCTCTTGTTTAGT----------------------AAG-C------------------------------------------------------------------------AATATCTATTTAAACATTTCTGTA-TTTCAGGGCACGTGGACTTGCTGGGTCGCGTTAAAATGCTACATTTGCGGTAAGA-------SizeHit CountTotal NormTotal
No Reads
droKik1
-----GGCCTTGAAGCCCTACGACGTCAAGGATGTCATGGAGCAATATGCGGCCGGTGAGTTCGAGTC----ATAAATTATATTTAAAGTTCATTTAATAAAATTAA-TTAAT--------TAATTA-------ATAAATAAAAATAAATT-------------------------------GTCAAAAAAT-------------------------------------------------CATA--------------AAT----------------------------------------------------------------------------------------AATTGTTATCCTTT-TTATATTT------------------------AATTTTTATTAAT------------------------------------------------------------------------------------------ATAT------------AAA---------------------------------------------------ATACCATTATA-TTTCAGGACACGTTGACTTGTTAGGTCGCGTTAAAATGCTACATTTGCGGTAAGAA------SizeHit CountTotal NormTotal
No Reads
droAna3
-----TTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATC-TTTTAGGTCATGTGGACTTGTTGGGTCGCGTAAAGATGCTACATCTGCGGTAAGTC------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCATGTGGACTTGTTGGGTCG..................................2311.001000001
droBip1
-----AGCCCTGAAGCCCTACGATGTCAAGGATGTCATGGAGCAATATGCAGCAGGTGAGTGATATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
-----CCATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACTAGCTTCAAAACTTTATACCT--------------------------CTCTTTGCTCC-TTCTAGGCCACGTGGACCTGTTGGGTCGCGTTAAGATGCTTCATTTGCGGTGAGTCTGCCAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTGGGTCGCGTTAAGAT.........................2030.3310100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCCACGTGGACCTGTTGG......................................2130.3310100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGCTCC-TTCTAGGCCACG..................................................2130.3310100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTCC-TTCTAGGCCACG..................................................2030.3310100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGCTCC-TTCTAGGCCA....................................................2030.3310100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTTCATTTGCGGTGAGT.......2130.3310100000000
droPer2
-----GGCCTTGAAGCCGTACGATGTCAAGGATGTCATGGAGCAGTACGCAGCTGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................GTCAAGGATGTCATGGAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........GAAGCCGTACGATGTCAAGGATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
droWil2
-----GGCCTTGAAACCGTACGATGTCAAGGATGTTATGGAGCAATATGCGGCAGGTACATTGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................ATGTCAAGGATGTTATGGAGCAATATGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
droVir3
-----TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGGTCACGTGGATTTGCTGGGTCGCGTCAAGATGCTGCATTTGCGGTA----------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTGGGTCGCGTCAAG...........................1811.001000000000000000000000100000000000000000000000000000000000000000
droMoj3
-----CTTATAATCTATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTCTA------------------------TATACTTATATAT------------------------------------------------------------------------------------------ATGT------------AAA---------------------------------------TCAC--------TCCTCAACTGT-TTGCAGGTCATGTGGATCTATTGGGTCGCGTCAAAATGCTGCATTTGCGGTGCGTATACTTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
-----CAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTCATTTACAGGTCACGTGGACTTACTGGGGCGCGTCAAAATGCTGCACTTGCGGTAAGTA------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAAATGCTGCACTTGCG.............1911.00110

Generated: 05/19/2015 at 12:23 PM