ID:

dsi_22856

 Coordinate:

3r:6217819-6217968 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [3r_6217741_6217818_+]; CDS [3r_6217741_6217818_+]; intron [3r_6217819_6218275_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AAATAATCATCGACACTCTGCACGTCGGAGATGCGGGCGATTCAGAAAATGTAAGTCAAGAATCCACAGCACGATATGACTAACATGTGTTTTCTTCTTTTCTCTCCATAACATCATCACATCTCAACCCTACATTTATTTGTGAATACTAACAACTAACTCGATCATCCTGCAATATGATTTTGTCAAAATCCCTCCATCATTTCGTTTGGCTTTTTTGGTTTGGTTTTGTAATCCTTTGGTTATCGAT
**************************************************((.(((((...(((........))).))))).))..(((((..................)))))..(((((...................))))).............((..((((((........))))))..))..............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 SRR902008
ovaries
 M053
female body
 O002
Head
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 M023
head
.............CACTCTGCACGTCGGAGATGCGGGC.................................................................................................................................................................................................................... 25 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0
.......CATCGACACTCTGCACGTCGGA............................................................................................................................................................................................................................. 22 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
....AATCATCGACACTCTGCACGTCGGA............................................................................................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
............................................GAAAATGTAAGTCAAGAATCCAC....................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................GTCAAAATCCCTCCATCATTTCGT.......................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................CTCGATCATTCTGAAATCTGATT.................................................................... 23 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.........................CGGAGATGCGGGCGATTC............................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TCATTTCGTTTGGCTTTTTTGGTT........................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........ATCGACACTCTGCACGTCGGA............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................CTGCACGTCGGAGATGCGGGC.................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................TCTGCACGTCGGAGATGCGGGCGAT................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....AATCATCGACACTCTGCACGT................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........GACACTCTGCACGTCGGAGATGCGGGC.................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................TTTCGTTTGGCTTTCATGGTT........................... 21 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TCATTTCGTTGCGCTTTTT................................ 19 2 14 0.14 2 0 0 0 0 0 0 0 2 0 0
.........................................................................................................................................................................................TCTAACTCCCTCCATCA................................................ 17 2 18 0.06 1 0 0 0 0 0 0 0 0 1 0
.......................................................................................................................................................................................................................................AAGTCCTTTGGTTATGGAT 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
................................ACGGGCGTTTCAGAAAATT....................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.............CACTCTGCACCTCGGG............................................................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

TTTATTAGTAGCTGTGAGACGTGCAGCCTCTACGCCCGCTAAGTCTTTTACATTCAGTTCTTAGGTGTCGTGCTATACTGATTGTACACAAAAGAAGAAAAGAGAGGTATTGTAGTAGTGTAGAGTTGGGATGTAAATAAACACTTATGATTGTTGATTGAGCTAGTAGGACGTTATACTAAAACAGTTTTAGGGAGGTAGTAAAGCAAACCGAAAAAACCAAACCAAAACATTAGGAAACCAATAGCTA
**************************************************((.(((((...(((........))).))))).))..(((((..................)))))..(((((...................))))).............((..((((((........))))))..))..............************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 GSM343915
embryo
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
..............................................................................................AAGAAATGCGAGGTATTG.......................................................................................................................................... 18 2 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................ACAACACAAGAAAAGAGCGGTAT............................................................................................................................................ 23 3 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TGTAGGAGTGTAGAGTT........................................................................................................................... 17 1 1 1.00 1 0 0 1 0 0 0 0
...........................................................................................................................................................................................TTTTCGGGAGGTACTAAAGC........................................... 20 2 2 0.50 1 0 0 0 1 0 0 0
..............................................................AGGGGTCGTGCTATAC............................................................................................................................................................................ 16 1 2 0.50 1 1 0 0 0 0 0 0
...................................................................................................AAGAGTAGTTTTGTAGTAGTGT................................................................................................................................. 22 3 2 0.50 1 1 0 0 0 0 0 0
.................................................................................................AAAATAGAGGCATTGTAG....................................................................................................................................... 18 2 3 0.33 1 0 1 0 0 0 0 0
...............................ACCCCCGCTAAGTCTT........................................................................................................................................................................................................... 16 1 3 0.33 1 1 0 0 0 0 0 0
......................................................................................CACAAAAGAAGAAAAGTAAGGT.............................................................................................................................................. 22 2 3 0.33 1 0 0 0 0 1 0 0
.......................................................................................................GAGGGATTGTAGTAGT................................................................................................................................... 16 1 4 0.25 1 1 0 0 0 0 0 0
........................................................................................................AGGTTTTGTAGTAGTG.................................................................................................................................. 16 1 6 0.17 1 1 0 0 0 0 0 0
.............................CTACGCCCGCTATGGGTTTT......................................................................................................................................................................................................... 20 3 7 0.14 1 0 0 1 0 0 0 0
....CTAGCAGCTGTGAGACTTG................................................................................................................................................................................................................................... 19 3 12 0.08 1 0 0 0 0 0 1 0
.......................................................................................................................................................GAGTGATTGAGCTAGTAGG................................................................................ 19 3 12 0.08 1 0 1 0 0 0 0 0
....................................................................................................................................................................................ATAATAGTTTTCGGGAGGT................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:6217769-6218018 + dsi_22856 AAATAATCATCGACACTCTGCACGTCGGAGATGCGGGCGATTCAGAAAATGTAAGTCAAGAATCC-ACAGCACGATATGACTAACA-TGTGTT--TTC---TTCTTTTC---TCTCCA-T----AACATCATCAC----------------ATCT--CAAC-CCTA--------------CATTTATTTG-TGAATACTAA---CAA------------------------------------------------------------------------------------------------CTA-AC----------------TCGATCA---TC-C-TGCAATATGATT---------------------------------TTGT-CAAAATCCCTCCATC-----ATTTCG-TTTGGCTT--TT-----TTG-------------------------------GTTT-------------------GGT-----------------------------TTT-GTAATCCTTTGGTTA---TCGAT---
droSec2 scaffold_25:720858-721107 + AAATAATCATCGACACTCTGCACGTCGGAGATGCGGGCGATTCAGAAAATGTAAGTCAAGAATCC-ACAGCATGATATGACTAACA-TGTGTT--TTC---TTCTTTTC---TCTCCA-T----AACATCATCAC----------------ATCT--CAAC-CCTA--------------CATTTATATG-TGAATACTAA---CAA------------------------------------------------------------------------------------------------CTA-AC----------------TCGATCA---TC-C-TGCAATATGATT---------------------------------TTGT-CAAAATTCCACCATC-----ATTTCG-TTTGGCTT--TT-----TTG-------------------------------GTTT-------------------GGT-----------------------------TTT-GTAATCCTTTGGTTA---TCGAT---
dm3 chr3R:15044491-15044740 - AAATAATCATCGACACTCTGCACGTCGGAGATGCGGGCGATTCAGAAAATGTAAGTCAAGAATCC-ACAGCATGATATGACTAACG-TGTGTT--TTC---TTCTTTTC---TCTCCA-T----AACATCATCAC----------------ATCT--CAAC-CCTA--------------CATTTATTTG-TGAAAACTAA---CTA------------------------------------------------------------------------------------------------CTA-AC----------------TCGATCA---TC-C-TGCAATATGATT---------------------------------TTGT-CAAAATCCTACCATC-----ATTTTG-TTTGGCTT--TT-----TTG-------------------------------GTTT-------------------GGT-----------------------------TTT-GTAATCCTTTGGTTA---TCGAT---
droEre2 scaffold_4770:6587207-6587473 + AAATAATCATCGACACTCTGCACGTCGGAGATGCGGGCGATTCAGAAAATGTAAGTCGAGAATCC-ACAGCATGATATAACTAACA-TGTGTT--TTC---TTCTTTTC---TCTCCA-T----AACATCACCCC----------------ATCT--CAAC-CATG--------------CATTTAATTG-TGAATACTAA---CTA----------------------------------------------------------------------------------------------------CTC-CCGGCTAATCACACTCTATCA---TC-C-TGCAATATGATT---------------------------------TGGT-CAAAATTGCACCACC-----ATTTCG-TTTGGCTT--TTTCGGTTTG-------------------------------GTTT-------------------GGT-----------------------------TTT-GTTATCTTTTGGTTT---TCGAT---
droYak3 3R:3746158-3746423 - AAATAATCATCGACACTTTGCACGTCGGCGATGCGGGCGATTCAGAAAATGTAAGTCAAGAATCC-ACTGCATGATATAACTAACA-TGTGTT--TTC---TTCTTTTC---TCTCCA-T----AACATCACCCC----------------ATCC--CAAA-CATG--------------CATTTAATTG-TGAATACTAA---CTA------------------------------------------------------------------------------------------------CTTACTC-CCGGCTAATCACACTCGATCA---TC-C-TGCAATATGATT---------------------------------TGGT-CAAACTTCCACCCCC-----ATTTCG-TTTGGCTT--TT-----TCG-------------------------------GTTT-------------------GGT-----------------------------TTT-GTAATCTTTTGGTTT---TGGAT---
droEug1 scf7180000409804:1307069-1307332 - AAATAATCATCGACACTCTGCACGTCGGCGATGCGGGCGATTCAGAAAATGTAAGTCAAGGATCC-ACAGCATGATCTAACTAATT-TGTGTT--CTC---TTCTTTTC---TTTCCA-C----AACATCACTTC----------------ATCTCTCATCATATG--------------CATTTCATTG-TGAATACTCA---CTA---------------------------------------------------------------------------------------A--------CTA-AACTGTGACTAACCATATTTGA-----------------------------------------------------------T-CGAAATACCATTACC-----CTTTCG-TTTGGCTTG-TT-----TT------------------------------------------------------TGGTTTTTGATTTTTGATT--------------TTC-GTAATCGTTTGGTTTTGTTGGGT---
droBia1 scf7180000302402:804282-804540 - AAATAATCATCGACACGCTGCACGTCGGCGATGCGGGCGATTCAGAAAATGTAAGTCGGGGAGCC-AATGCATGATCTAACTAACT-TGTGTT--CTC---TTCTTTTC---TCTCCA-C----AACATCCA-TC-----------CACTCATCT--CATC-CATG--------------CATTTGATTG-TGAAAACTAA---CTA---------------------------------------------------------------------------------------A--------CTA-AC--------AAC--------AACA---TGAT-TGCAATATGATT---------------------------------TTGT-CGAAATTCCACCACC----CTCTTCT-TTTGGCTTG-AT-----TTG-------------------------GTTT-----T-------------------GGT-----------------------------TTG-GTAATCATTCGGTTT---TCGGT---
droTak1 scf7180000410451:65784-66024 - AAATAATCATCGACACCCTGCACGTCGGCGATGCGGGTGATTCAGAAAATGTAAGTCAAGGAACC-ACTGCATGATCTTACTAACT-TGTGTT--CTC---TTCTTTTC---TCTC-ATC--ACAACATCAACTC----------------ATCT--CATC-C-----------------------------------TAAT--TAA------------------------------------------------------------------------------------CTAA--------CTA-AC------------------CATCA---AC-A-TGCAAAATGAGT---------------------------------TTGT-CAAAATTCCACAACC---CCTTTTAC-TTTGGCTTG-AT-----TTG-------------------------GTTTTGGTTT-------------------GGT-----------------------------TTC-GT---CATTCGGTTT---TCGGT---
droEle1 scf7180000490994:811275-811539 - AAATAATCATCGACACGCTGCACGTCGGCGATGCGGGCGATTCAGAAAATGTAAGTCAAGGATCC-ACAGCATGATCTAACTAACT-TTTGTT--CTC---TTCTTTTC---TCTCCA-C----AACATCACCTC----------------ATCT--CATC-CATG--------------CATTTGATTG-TGAATACTAA---CTA----------------------------------------------------------------------------------------------------ACC-GCGACTAACCACATTCGATCA---AC-C-TGCAATATGATT---------------------------------TTGA-CAAAATTCCACAACC----CTATTTG-TTTGGCTTTGTT-----TTG-------------------------------GTTT-------------------GGT-----------------------------TTT-GTAATCGTTCGGTTT---TCGGT---
droRho1 scf7180000777405:29590-29850 + AAATAATCATCGACACGTTGCACGTCGGCGATGCGGGCGACTCCGAAAATGTAAGTCAAAGATAC-TCAGCATGATCTAACTAACT-TGTGTT--TTC---TTCTTTTC---TCTCCA-C----ATCATCACCTC----------------ATCT--CATC-CATG--------------CATTTGATTG-TGAATACTAA---CTA----------------------------------------------------------------------------------------------------TCC-ACGACTAACCACATTCGATC------------AATATGATTT---------------TCATT------------TTGT-CAAAAT-CCATAATC-----TTTTTG-TTTGGCTTG-TT-----TTG-------------------------------GTTT-------------------GGT-----------------------------TTT-GTAATCGTTCGGTTT---TCGGT---
droFic1 scf7180000454126:19684-19946 - AAATAGTCATCGACACGCTGCACGTCGGCGATGCGGGCGACTCAGAAAATGTAAGTCGGAGATCC-ACAGCATGATCTTACTAACT-TGTATT--CTC---TTCTTTTC---TCTCCA-C----AACATCACATC-----------ACCTCATCT--CATC-TATG--------------CATTTGATTG-TGAATACTAA---CTA----------------------------------------------------------------------------------------------------ACC-GCGACTAACCGCATTTGATCA---AT-A-TGCAATATGATT---------------------------------TTGT-CAAAATTCCACGACC-----CATGTG-TTTGGCTTG-TT-----TTG-------------------------GTTTTGGA-----------------------T-----------------------------ATT-TTAAT-------TTT---TATGT---
droKik1 scf7180000302707:257351-257616 - AAATAATCATCGACACGCTGCACGTCGGCGATGGGGGCGACTCGGAAAATGTAAGTCAAGGATCC-ATTGCCAGACGTTACTAACCCCGTGTT--CTT---TTCTTTTC---TCTCCA-C--AAAACGTCACCTC----------------ATCT--CGTC--ATG--------------CAT-----TG-TGAATACTAATCACGA------------------------------------------------------------------------------------CTAA--------CTA-ACC----ACTAACAACATTTGATC----------GCCATTTGAGT---------------------------------TCGT-T-----------TTC-----CTTTGG-TTTGGCTTG-TT-----TTG-------------------------------GTTT------------------CGGTTTCCGTTCTTGG--------ACA---CTTTCT-GTTA----TCGATTA---TCGGT---
droAna3 scaffold_13340:15343247-15343483 + AAATAATCATCGACACGCTCCACGTGGGCGATGCGGGCGACTCGGAAAATGTAAGTCAAGTATCC-TGATCACGATTTAACTAACT-GTTGTT--TTC---TACT-TTC---TCTCCA-T----AACACAACCTC----------------ATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGTTCGTCCA---TC-A-CGCACTCTGATT---------------------------------TCTTTTTAAATTCATCAAAA-----TTATTA-TTTGGCTTG-CT-----TTG-------------------------GTTTTGGTTT------------------CGGTTTCGGTTCTTTTCGA--------------TTC-GTTA----TCGGTTA---TCATT---
droBip1 scf7180000396708:4690883-4691108 - AAATAATCATCGACACGCTCCACGTGGGTGATGCGGGCGATTCGGAAAACGTAAGTGAAGTATTT-AAAGCACGATTTAACTAACT-GGTGTT--TTC---TACT-TTC---TCTCCA-T----AACACAACCTCCTCACCAACGTTC-----TT--CGTC---------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTATGA---------T-TGCACTATGATTT---------------CCA---------------TTT-CAAAATTCA-TCATCAAAAATTATTA-TTTGGCTTG-CT-----TTG-------------------------GTTTTGGT-----------------------------------------------------------------TTGTTGA---TCTAT---
dp5 2:29490648-29490938 - AAATAATCATCGACACGCTGCACGTCGGCGATGCGGGCGATTCAGAGAATGTAAGTCATGGATCC-CTGACAAAATGCCACTAATT-TGTGTT--C-C---TCCTTTTCTCCTTTTCA-TTTAAAA-----TCTC-----------------------A---------TTAATCGCCATATAT-----CGACTAATATCAA----------------------------------------------------------------------------------------------TCAAT-CAATC-AA----------------TCGATCG---TC-CATGCAATTTGCTT---------------------------------GTGT-GTGTGTTTCCCCACT-AACGTTTTCC-TTTGGCTTGGTT-----TTG-------------------------------GCTTTTATGGTTTATGGCTTAT--------GGTTTTTGATCTCTGTACA-------------ACTGTTCTGTTCTTCTG--TTAA
droPer2 scaffold_6:4861334-4861620 - AAATAATCATCGACACGCTGCACGTCGGCGATGCGGGCGATTCAGAGAATGTAAGTGATGGATCC-CTGACAAAATGCCACTAATT-TGTGTT--C-C---TCCTTTTCTCCTTTTCA-TTTAAAA-----TCTC-----------------------A---------TTAATCGCCATATAT-----CGACTAATATCAA---TCA------------------------------------------------------------------------------------------------ATC-AA----------------TCGATCG---TC-CATGCAATTTGCTT---------------------------------GTGT-GTGTGTTTCCCCACT-AACGTTTTCC-TTTGGCTTGGTT-----TTG-------------------------------GCTTTTATGGTTTATGGCTTAT--------GGTTTTTGATCTCTGTACA-------------ACTGTTCTGTTCTTCTG--TTAA
droWil2 scf2_1100000004943:3785890-3786168 - AAATAGTCATCGACACGTTGCATGTCAGCGATGGTGGAGATGCCGAAAATGTAAGTTGCGTGCCGAAAAGCAAAATTTAACTAATT-TGTTTT--TCTTTTTTCGTTTC---TCTTTC----------------------------------TTT--CGTTTTATGTT------------CATTCC------ATACCCTAA---CTA---------ACCACA-TAACCAT----------------------AATAAA-ATCCATATC-----TAACA-----------------------------------------------TTTATCATCATT-ACTGGAATTTGTTT-CTTGT----------------------------TTT-CGAA-------------ACATTTTGCTTTTAATTT-GTT-----GTG-----TTTAAACATTTATTTTTTTGGTTTTGGT-----------------------------------------------------------------TAAAATT---TTTGT---
droVir3 scaffold_13047:7268825-7269132 - dvi_15820 AAATAATCATCGACACGTTGCACGTCGGCGATGCGGGAGACTCAGAGAATGTAAGTGAAAT-TTT-AATGCAGTGTTTAACTAATT-TGTTTGTTTCT---TTCTTTTT---CTTCCT-T----TACTT------------------------------AC-ACTA--------------TATTTACGCA-TAAATACTAA---CAATATTTATTA----------C--AAAAAAAAAAAAAAAAAAAAAAAAACAACTTTCGAATACTATCTTAAAACCGATCATTTAAC----ATTGCA------------------------------------------AATTCGTTT--TCGATT-------------------------G--T-GGAATTTCAATTCAA-----ATTTCA-TTCGGTGCG-TT-----TTT-------------------------GTTT-----G-------------------GGC-------------------------AT--TTTGTTTATTATTTGACTG---TTAAT---
droMoj3 scaffold_6540:3190144-3190446 - AAATAACCATCGACACGTTGCACGTGAGCGATTCGGGAGAATCAGAAAATGTAAGTGAAAT-TTC-AATTCATAATTTGACTAATT-CGTGTGTTTCT---TTCTTTTT---CTTCCA-T----TACTT-A---C----------------ACTA--TAAA-TAC----------------------GCA-TAAATACTAA---CAATACTTGTTAAATGCATAAAC--A----------------------AACAATTTTCAAAAACTATCTCAAAATTCATCATTTCA----------AAATTC-GC---------------------------------CAA----TTT--TTGATTATGGAATTTCAATTAAAAATTTATTGG----------------------------G-TGCGTTTA--TT-----CTGATGTGCGTGTGCATTTA-----------------------------------------------------------------------TGTTTATAATTTGGCTG---TTAAA---
droGri2 scaffold_14830:3124240-3124531 - AAATAATCATCGACACGTTGCACGTCGGCGATGCGGGAGACTCGGAGAATGTAAGTGAAAAGTTG-TCAACAGTGTTTAACTAATT-TATGTGTTTCT---TTCTTTTT---CTTCCA-T----CTCGT------------------------A---CATGATATGTA------------TATTT--ATA-TATATACTAA---CAATATCTTTAAAATACTAATACTAA----------------------AATAAT-ATCGAAAACTGTCTTAAAACCGATCATTTTAA----TTCGT-AATTC-GT----------------TTTATT-------------------------GATTATGGAAATTC------------ATTGG----------------------------G-TGCGTTTT--AT-----TTG------------------------------------------------------GGA-----------------------ACAT--TTTATTTATAATTTGGCTG---TGAAT---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAATAATCATCGACACTCTGCACGTCGGAGATGCGGGCGATTCAGAAAATGTAAGTCAAGAATCC-ACAGCACGATATGACTAACA-TGTGTT--TTC---TTCTTTTC---TCTCCA-T----AACATCATCAC----------------ATCT--CAAC-CCTA--------------CATTTATTTG-TGAATACTAA---CAA------------------------------------------------------------------------------------------------CTA-AC----------------TCGATCA---TC-C-TGCAATATGATT---------------------------------TTGT-CAAAATCCCTCCATC-----ATTTCG-TTTGGCTT--TT-----TTG-------------------------------GTTT-------------------GGT-----------------------------TTT-GTAATCCTTTGGTTA---TCGAT---SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............CACTCTGCACGTCGGAGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00302100000000000000
.......CATCGACACTCTGCACGTCGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00201100000000000000
....AATCATCGACACTCTGCACGTCGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00202000000000000000
............................................GAAAATGTAAGTCAAGAATCC-AC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000100000000000
...................................................................................................................................................................................................................................................................................................................................................................................................GT-CAAAATCCCTCCATC-----ATTTCG-T.......................................................................................................................................2411.00100010000000000000
.........................CGGAGATGCGGGCGATTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TC-----ATTTCG-TTTGGCTT--TT-----TTG-------------------------------GTT..................................................................................2411.00100000000000010000
........ATCGACACTCTGCACGTCGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.................CTGCACGTCGGAGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
................TCTGCACGTCGGAGATGCGGGCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
....AATCATCGACACTCTGCACGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
...........GACACTCTGCACGTCGGAGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
droSec2
AAATAATCATCGACACTCTGCACGTCGGAGATGCGGGCGATTCAGAAAATGTAAGTCAAGAATCC-ACAGCATGATATGACTAACA-TGTGTT--TTC---TTCTTTTC---TCTCCA-T----AACATCATCAC----------------ATCT--CAAC-CCTA--------------CATTTATATG-TGAATACTAA---CAA------------------------------------------------------------------------------------------------CTA-AC----------------TCGATCA---TC-C-TGCAATATGATT---------------------------------TTGT-CAAAATTCCACCATC-----ATTTCG-TTTGGCTT--TT-----TTG-------------------------------GTTT-------------------GGT-----------------------------TTT-GTAATCCTTTGGTTA---TCGAT---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................CTGCACGTCGGAGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
..............ACTCTGCACGTCGGAGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
.........TCGACACTCTGCACGTCGGAGATGCGGGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010100
...........GACACTCTGCACGTCGGAGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
.............CACTCTGCACGTCGGAGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
dm3
AAATAATCATCGACACTCTGCACGTCGGAGATGCGGGCGATTCAGAAAATGTAAGTCAAGAATCC-ACAGCATGATATGACTAACG-TGTGTT--TTC---TTCTTTTC---TCTCCA-T----AACATCATCAC----------------ATCT--CAAC-CCTA--------------CATTTATTTG-TGAAAACTAA---CTA------------------------------------------------------------------------------------------------CTA-AC----------------TCGATCA---TC-C-TGCAATATGATT---------------------------------TTGT-CAAAATCCTACCATC-----ATTTTG-TTTGGCTT--TT-----TTG-------------------------------GTTT-------------------GGT-----------------------------TTT-GTAATCCTTTGGTTA---TCGAT---SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................ACGTCGGAGATGCGGGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1818.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008
...........GACACTCTGCACGTCGGAGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2717.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010030000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000100000
.................CTGCACGTCGGAGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000001000000
.........................CGGAGATGCGGGCGATTCAGAAAATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACACTCTGCACGTCGGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCGACACTCTGCACGTCGGAGATGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CTCTGCACGTCGGAGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
....AATCATCGACACTCTGCACGTCGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................GGAGATGCGGGCGATTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GCACGTCGGAGATGCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GCGGGCGATTCAGAAAATGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................TCGGAGATGCGGGCGATTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ACTCTGCACGTCGGAGATGCGGGCGATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GATGCGGGCGATTCAGAAAATGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........CGACACTCTGCACGTCGGAGATGCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TGCACGTCGGAGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................CTGCACGTCGGAGATGCGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ACTCTGCACGTCGGAGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................AGATGCGGGCGATTCAGAAAATGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TCATCGACACTCTGCACGTCGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ACTCTGCACGTCGGAGATGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CATCGACACTCTGCACGTCGGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................G-TTTGGCTT--TT-----TTG-------------------------------GTTT-------------------GGT-----------------------------..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CGTCGGAGATGCGGGCGATTCAGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCGACACTCTGCACGTCGGAGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ATGCGGGCGATTCAGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...........................GAGATGCGGGCGATTCAGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CATCGACACTCTGCACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACACTCTGCACGTCGGAGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TCTGCACGTCGGAGATGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.............CACTCTGCACGTCGGAGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................CACGTCGGAGATGCGGGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
....AATCATCGACACTCTGCACGTCGGAGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCGACACTCTGCACGTCGGAGATGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ATCATCGACACTCTGCACGTCGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GACACTCTGCACGTCGGAGATGCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GATGCGGGCGATTCAGAAAATGTGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TCTGCACGTCGGAGATGCGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GGGCGATTCAGAAAATGTGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
droEre2
AAATAATCATCGACACTCTGCACGTCGGAGATGCGGGCGATTCAGAAAATGTAAGTCGAGAATCC-ACAGCATGATATAACTAACA-TGTGTT--TTC---TTCTTTTC---TCTCCA-T----AACATCACCCC----------------ATCT--CAAC-CATG--------------CATTTAATTG-TGAATACTAA---CTA----------------------------------------------------------------------------------------------------CTC-CCGGCTAATCACACTCTATCA---TC-C-TGCAATATGATT---------------------------------TGGT-CAAAATTGCACCACC-----ATTTCG-TTTGGCTT--TTTCGGTTTG-------------------------------GTTT-------------------GGT-----------------------------TTT-GTTATCTTTTGGTTT---TCGAT---SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................TCTGCACGTCGGAGATGCGGGCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25115.001500000015
.................CTGCACGTCGGAGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020002000
..........................................................................................................................................................................................................................................................................................................................................................ATGATT---------------------------------TGGT-CAAAATTGCAC........................................................................................................................................................2111.0010000010
................TCTGCACGTCGGAGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
...........GACACTCTGCACGTCGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
.....ATCATCGACACTCTGCACGTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.....................ACGTCGGAGATGCGGGCGATTCAGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
............ACACTCTGCACGTCGGAGATGCGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000001
..........CGACACTCTGCACGTCGGAGATGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.......CATCGACACTCTGCACGTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
...........GACACTCTGCACGTCGGAGATGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
...........GACACTCTGCACGTCGGAGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000
..................................GGGCGATTCAGAAAATGTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
droYak3
AAATAATCATCGACACTTTGCACGTCGGCGATGCGGGCGATTCAGAAAATGTAAGTCAAGAATCC-ACTGCATGATATAACTAACA-TGTGTT--TTC---TTCTTTTC---TCTCCA-T----AACATCACCCC----------------ATCC--CAAA-CATG--------------CATTTAATTG-TGAATACTAA---CTA------------------------------------------------------------------------------------------------CTTACTC-CCGGCTAATCACACTCGATCA---TC-C-TGCAATATGATT---------------------------------TGGT-CAAACTTCCACCCCC-----ATTTCG-TTTGGCTT--TT-----TCG-------------------------------GTTT-------------------GGT-----------------------------TTT-GTAATCTTTTGGTTT---TGGAT---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............ACTTTGCACGTCGGCGATGCGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................C-----ATTTCG-TTTGGCTT--TT-----TCG-------------------------------GT...................................................................................2211.00100100000000
..................TGCACGTCGGCGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.............CACTTTGCACGTCGGCGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................C-----ATTTCG-TTTGGCTT--TT-----TCG-------------------------------GTTT-------------------G.............................................................2511.00100000010000
....AATCATCGACACTTTGCACGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TT--TT-----TCG-------------------------------GTTT-------------------GGT-----------------------------TTT-GT........................1911.00100100000000
.......CATCGACACTTTGCACGTCGGCGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
................TTTGCACGTCGGCGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..................................................................................................................................................................................................ATACTAA---CTA------------------------------------------------------------------------------------------------CTTACTC-CCGGCTA...........................................................................................................................................................................................................................................2411.00101000000000
....AATCATCGACACTTTGCACGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
............................................GAAAATGTAAGTCAAGAATCC-A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
..................TGCACGTCGGCGATGCGGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
.............CACTTTGCACGTCGGCGATGCGGGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
..............ACTTTGCACGTCGGCGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCG-TTTGGCTT--TT-----TCG-------------------------------GTTT-------------------GGT-----------------------------T.............................2711.00100000010000
..............................ATGCGGGCGATTCAGAAAATGTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
droEug1
AAATAATCATCGACACTCTGCACGTCGGCGATGCGGGCGATTCAGAAAATGTAAGTCAAGGATCC-ACAGCATGATCTAACTAATT-TGTGTT--CTC---TTCTTTTC---TTTCCA-C----AACATCACTTC----------------ATCTCTCATCATATG--------------CATTTCATTG-TGAATACTCA---CTA---------------------------------------------------------------------------------------A--------CTA-AACTGTGACTAACCATATTTGA-----------------------------------------------------------T-CGAAATACCATTACC-----CTTTCG-TTTGGCTTG-TT-----TT------------------------------------------------------TGGTTTTTGATTTTTGATT--------------TTC-GTAATCGTTTGGTTTTGTTGGGT---SizeHit CountTotal NormTotal
No Reads
droBia1
AAATAATCATCGACACGCTGCACGTCGGCGATGCGGGCGATTCAGAAAATGTAAGTCGGGGAGCC-AATGCATGATCTAACTAACT-TGTGTT--CTC---TTCTTTTC---TCTCCA-C----AACATCCA-TC-----------CACTCATCT--CATC-CATG--------------CATTTGATTG-TGAAAACTAA---CTA---------------------------------------------------------------------------------------A--------CTA-AC--------AAC--------AACA---TGAT-TGCAATATGATT---------------------------------TTGT-CGAAATTCCACCACC----CTCTTCT-TTTGGCTTG-AT-----TTG-------------------------GTTT-----T-------------------GGT-----------------------------TTG-GTAATCATTCGGTTT---TCGGT---SizeHit CountTotal NormTotal
No Reads
droTak1
AAATAATCATCGACACCCTGCACGTCGGCGATGCGGGTGATTCAGAAAATGTAAGTCAAGGAACC-ACTGCATGATCTTACTAACT-TGTGTT--CTC---TTCTTTTC---TCTC-ATC--ACAACATCAACTC----------------ATCT--CATC-C-----------------------------------TAAT--TAA------------------------------------------------------------------------------------CTAA--------CTA-AC------------------CATCA---AC-A-TGCAAAATGAGT---------------------------------TTGT-CAAAATTCCACAACC---CCTTTTAC-TTTGGCTTG-AT-----TTG-------------------------GTTTTGGTTT-------------------GGT-----------------------------TTC-GT---CATTCGGTTT---TCGGT---SizeHit CountTotal NormTotal
No Reads
droEle1
AAATAATCATCGACACGCTGCACGTCGGCGATGCGGGCGATTCAGAAAATGTAAGTCAAGGATCC-ACAGCATGATCTAACTAACT-TTTGTT--CTC---TTCTTTTC---TCTCCA-C----AACATCACCTC----------------ATCT--CATC-CATG--------------CATTTGATTG-TGAATACTAA---CTA----------------------------------------------------------------------------------------------------ACC-GCGACTAACCACATTCGATCA---AC-C-TGCAATATGATT---------------------------------TTGA-CAAAATTCCACAACC----CTATTTG-TTTGGCTTTGTT-----TTG-------------------------------GTTT-------------------GGT-----------------------------TTT-GTAATCGTTCGGTTT---TCGGT---SizeHit CountTotal NormTotal
No Reads
droRho1
AAATAATCATCGACACGTTGCACGTCGGCGATGCGGGCGACTCCGAAAATGTAAGTCAAAGATAC-TCAGCATGATCTAACTAACT-TGTGTT--TTC---TTCTTTTC---TCTCCA-C----ATCATCACCTC----------------ATCT--CATC-CATG--------------CATTTGATTG-TGAATACTAA---CTA----------------------------------------------------------------------------------------------------TCC-ACGACTAACCACATTCGATC------------AATATGATTT---------------TCATT------------TTGT-CAAAAT-CCATAATC-----TTTTTG-TTTGGCTTG-TT-----TTG-------------------------------GTTT-------------------GGT-----------------------------TTT-GTAATCGTTCGGTTT---TCGGT---SizeHit CountTotal NormTotal
No Reads
droFic1
AAATAGTCATCGACACGCTGCACGTCGGCGATGCGGGCGACTCAGAAAATGTAAGTCGGAGATCC-ACAGCATGATCTTACTAACT-TGTATT--CTC---TTCTTTTC---TCTCCA-C----AACATCACATC-----------ACCTCATCT--CATC-TATG--------------CATTTGATTG-TGAATACTAA---CTA----------------------------------------------------------------------------------------------------ACC-GCGACTAACCGCATTTGATCA---AT-A-TGCAATATGATT---------------------------------TTGT-CAAAATTCCACGACC-----CATGTG-TTTGGCTTG-TT-----TTG-------------------------GTTTTGGA-----------------------T-----------------------------ATT-TTAAT-------TTT---TATGT---SizeHit CountTotal NormTotal
No Reads
droKik1
AAATAATCATCGACACGCTGCACGTCGGCGATGGGGGCGACTCGGAAAATGTAAGTCAAGGATCC-ATTGCCAGACGTTACTAACCCCGTGTT--CTT---TTCTTTTC---TCTCCA-C--AAAACGTCACCTC----------------ATCT--CGTC--ATG--------------CAT-----TG-TGAATACTAATCACGA------------------------------------------------------------------------------------CTAA--------CTA-ACC----ACTAACAACATTTGATC----------GCCATTTGAGT---------------------------------TCGT-T-----------TTC-----CTTTGG-TTTGGCTTG-TT-----TTG-------------------------------GTTT------------------CGGTTTCCGTTCTTGG--------ACA---CTTTCT-GTTA----TCGATTA---TCGGT---SizeHit CountTotal NormTotal
No Reads
droAna3
AAATAATCATCGACACGCTCCACGTGGGCGATGCGGGCGACTCGGAAAATGTAAGTCAAGTATCC-TGATCACGATTTAACTAACT-GTTGTT--TTC---TACT-TTC---TCTCCA-T----AACACAACCTC----------------ATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGTTCGTCCA---TC-A-CGCACTCTGATT---------------------------------TCTTTTTAAATTCATCAAAA-----TTATTA-TTTGGCTTG-CT-----TTG-------------------------GTTTTGGTTT------------------CGGTTTCGGTTCTTTTCGA--------------TTC-GTTA----TCGGTTA---TCATT---SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................GATGCGGGCGACTCGGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.............................GATGCGGGCGACTCGGAAAATGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..............ACGCTCCACGTGGGCGATGCGGGCGACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
droBip1
AAATAATCATCGACACGCTCCACGTGGGTGATGCGGGCGATTCGGAAAACGTAAGTGAAGTATTT-AAAGCACGATTTAACTAACT-GGTGTT--TTC---TACT-TTC---TCTCCA-T----AACACAACCTCCTCACCAACGTTC-----TT--CGTC---------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTATGA---------T-TGCACTATGATTT---------------CCA---------------TTT-CAAAATTCA-TCATCAAAAATTATTA-TTTGGCTTG-CT-----TTG-------------------------GTTTTGGT-----------------------------------------------------------------TTGTTGA---TCTAT---SizeHit CountTotal NormTotal
No Reads
dp5
AAATAATCATCGACACGCTGCACGTCGGCGATGCGGGCGATTCAGAGAATGTAAGTCATGGATCC-CTGACAAAATGCCACTAATT-TGTGTT--C-C---TCCTTTTCTCCTTTTCA-TTTAAAA-----TCTC-----------------------A---------TTAATCGCCATATAT-----CGACTAATATCAA----------------------------------------------------------------------------------------------TCAAT-CAATC-AA----------------TCGATCG---TC-CATGCAATTTGCTT---------------------------------GTGT-GTGTGTTTCCCCACT-AACGTTTTCC-TTTGGCTTGGTT-----TTG-------------------------------GCTTTTATGGTTTATGGCTTAT--------GGTTTTTGATCTCTGTACA-------------ACTGTTCTGTTCTTCTG--TTAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...TAATCATCGACACGCTGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.............CACGCTGCACGTCGGCGATGCGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000001000
...........................GCGATGCGGGCGATTCAGAGAATGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000001000
.............CACGCTGCACGTCGGCGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...............CGCTGCACGTCGGCGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATCTCTGTACA-------------ACTGTT.................2111.0010100000000
...TAATCATCGACACGCTGCACGTCGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
....AATCATCGACACGCTGCACGTCGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.......CATCGACACGCTGCACGTCGGCGATGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000001000
....AATCATCGACACGCTGCACGTCGGCGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
.......CATCGACACGCTGCACGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.......CATCGACACGCTGCACGTCGGCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
....AATCATCGACACGCTGCACGTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
.................................................................................TAATT-TGTGTT--C-C---TCCTTTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................21190.0510100000000
droPer2
AAATAATCATCGACACGCTGCACGTCGGCGATGCGGGCGATTCAGAGAATGTAAGTGATGGATCC-CTGACAAAATGCCACTAATT-TGTGTT--C-C---TCCTTTTCTCCTTTTCA-TTTAAAA-----TCTC-----------------------A---------TTAATCGCCATATAT-----CGACTAATATCAA---TCA------------------------------------------------------------------------------------------------ATC-AA----------------TCGATCG---TC-CATGCAATTTGCTT---------------------------------GTGT-GTGTGTTTCCCCACT-AACGTTTTCC-TTTGGCTTGGTT-----TTG-------------------------------GCTTTTATGGTTTATGGCTTAT--------GGTTTTTGATCTCTGTACA-------------ACTGTTCTGTTCTTCTG--TTAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....AATCATCGACACGCTGCACGTCGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
..............ACGCTGCACGTCGGCGATGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002101000
......................................................GTGATGGATCC-CTGACAAAATGCCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..................................GGGCGATTCAGAGAATGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
droWil2
AAATAGTCATCGACACGTTGCATGTCAGCGATGGTGGAGATGCCGAAAATGTAAGTTGCGTGCCGAAAAGCAAAATTTAACTAATT-TGTTTT--TCTTTTTTCGTTTC---TCTTTC----------------------------------TTT--CGTTTTATGTT------------CATTCC------ATACCCTAA---CTA---------ACCACA-TAACCAT----------------------AATAAA-ATCCATATC-----TAACA-----------------------------------------------TTTATCATCATT-ACTGGAATTTGTTT-CTTGT----------------------------TTT-CGAA-------------ACATTTTGCTTTTAATTT-GTT-----GTG-----TTTAAACATTTATTTTTTTGGTTTTGGT-----------------------------------------------------------------TAAAATT---TTTGT---SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................ATGTCAGCGATGGTGGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200110
.....................ATGTCAGCGATGGTGGAGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
...............................TGGTGGAGATGCCGAAAATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
....................CATGTCAGCGATGGTGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.............................GATGGTGGAGATGCCGAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
.AATAGTCATCGACACGTTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
droVir3
AAATAATCATCGACACGTTGCACGTCGGCGATGCGGGAGACTCAGAGAATGTAAGTGAAAT-TTT-AATGCAGTGTTTAACTAATT-TGTTTGTTTCT---TTCTTTTT---CTTCCT-T----TACTT------------------------------AC-ACTA--------------TATTTACGCA-TAAATACTAA---CAATATTTATTA----------C--AAAAAAAAAAAAAAAAAAAAAAAAACAACTTTCGAATACTATCTTAAAACCGATCATTTAAC----ATTGCA------------------------------------------AATTCGTTT--TCGATT-------------------------G--T-GGAATTTCAATTCAA-----ATTTCA-TTCGGTGCG-TT-----TTT-------------------------GTTT-----G-------------------GGC-------------------------AT--TTTGTTTATTATTTGACTG---TTAAT---SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................GTTGCACGTCGGCGATGCGGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000001010
.......................GTCGGCGATGCGGGAGACTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000001000000000000000000000000000000
................GTTGCACGTCGGCGATGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
.AATAATCATCGACACGTTGCACGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
........ATCGACACGTTGCACGTCGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
..ATAATCATCGACACGTTGCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TTTATTA----------C--AAAAAAAAAAAAAAAA....................................................................................................................................................................................................................................................................................................................2420.501001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAA............................................................................................................................................................................................................................................................................................................22200.357000700000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................C--AAAAAAAAAAAAAAAAAAA.................................................................................................................................................................................................................................................................................................................20200.051000000000000000000100000000000000000000000000000000000000000000
droMoj3
AAATAACCATCGACACGTTGCACGTGAGCGATTCGGGAGAATCAGAAAATGTAAGTGAAAT-TTC-AATTCATAATTTGACTAATT-CGTGTGTTTCT---TTCTTTTT---CTTCCA-T----TACTT-A---C----------------ACTA--TAAA-TAC----------------------GCA-TAAATACTAA---CAATACTTGTTAAATGCATAAAC--A----------------------AACAATTTTCAAAAACTATCTCAAAATTCATCATTTCA----------AAATTC-GC---------------------------------CAA----TTT--TTGATTATGGAATTTCAATTAAAAATTTATTGG----------------------------G-TGCGTTTA--TT-----CTGATGTGCGTGTGCATTTA-----------------------------------------------------------------------TGTTTATAATTTGGCTG---TTAAA---SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....AACCATCGACACGTTGCACGTGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...........GACACGTTGCACGTGAGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droGri2
AAATAATCATCGACACGTTGCACGTCGGCGATGCGGGAGACTCGGAGAATGTAAGTGAAAAGTTG-TCAACAGTGTTTAACTAATT-TATGTGTTTCT---TTCTTTTT---CTTCCA-T----CTCGT------------------------A---CATGATATGTA------------TATTT--ATA-TATATACTAA---CAATATCTTTAAAATACTAATACTAA----------------------AATAAT-ATCGAAAACTGTCTTAAAACCGATCATTTTAA----TTCGT-AATTC-GT----------------TTTATT-------------------------GATTATGGAAATTC------------ATTGG----------------------------G-TGCGTTTT--AT-----TTG------------------------------------------------------GGA-----------------------ACAT--TTTATTTATAATTTGGCTG---TGAAT---SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 09:04 PM