ID:

dsi_22828

 Coordinate:

2l:12078207-12078356 -

 Confidence:

Known Ortholog

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.2 -19.0 -18.8

Flybase annnotation

five_prime_UTR [2l_12078076_12078206_-]; exon [2l_12078012_12078206_-]; intron [2l_12078207_12079663_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################

CAGTGAAGCGCTCTTCCCACAACACTTGCCTGCCATTTGGAATATTTATAAGCCCAGCGGCTAATTGAGTGAGAGGGAGAGCAGGAGAGCGGTCAGCTAGTCACTCACTCGGTTTCTCACTCACTCAGCCGGCGGCCGTTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTTGACGATTGTTTGTCTTTCCGCACAGAACAAAACTGAACAGAAACGAATCCGGTTGCCGGTTCACATCAACGCTTT

******************************************************************************************(((.((..((..(((.....)))..))..)).))).((..((((((.........))))))..))............(((.....(((((....)))))....)))......************************************************ 		Read size # Mismatch Hit Count Total Norm Total M023

head

 M024

male body		 M025

embryo

 O002

Head

 O001

Testis

 SRR902009

testis

 SRR618934

dsim w501 ovaries

 SRR553488

RT_0-2 hours eggs

 M053

female body

 SRR553487

NRT_0-2 hours eggs

 SRR553485

Chicharo_3 day-old ovaries

 SRR553486

Makindu_3 day-old ovaries
................................................................................................................................................................................................CCGCACAGAACAAAACTG........................................ 18 0 1 57.00 57 48 8 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ACTGAACAGAAACGAATC.......................... 18 0 1 11.00 11 7 1 2 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................CGCACAGAACAAAACTGAACAGAAA................................ 25 0 1 10.00 10 10 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CCGCACAGAACAAAACTGAACAG................................... 23 0 1 9.00 9 9 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CCGCACAGAACAAAACTGAACAGA.................................. 24 0 1 8.00 8 8 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TCCGCACAGAACAAAACTGAACAG................................... 24 0 1 8.00 8 6 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CGCACAGAACAAAACTGAACAGA.................................. 23 0 1 6.00 6 3 2 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CGCACAGAACAAAACTGAACAGAAAC............................... 26 0 1 4.00 4 1 1 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TCCGCACAGAACAAAACTG........................................ 19 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CCGCACAGAACAAAACTGAA...................................... 20 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GCATTTGACGATTGTTTG............................................................... 18 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AACAGAAACGAATCCGGTTG.................... 20 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CAAAACTGAACAGAAACGAATCC......................... 23 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................TTTCCGCACAGAACAAAACTG........................................ 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CGCACAGAACAAAACTGAACAGAAACG.............................. 27 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGAACAAAACTGAACAGA.................................. 18 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CAAAACTGAACAGAAACG.............................. 18 0 1 3.00 3 2 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GAACAAAACTGAACAGAAACGAATC.......................... 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CCGCACAGAACAAAACTGAACAGAAAC............................... 27 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CCGCACAGAACAAAACTGAAC..................................... 21 0 1 2.00 2 0 0 0 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................TCCGCACAGAACAAAACTGAA...................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................ACAGAACAAAACTGAACAG................................... 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CGCACAGAACAAAACTGAACAGAA................................. 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ACTGAACAGAAACGAATCC......................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CGCACAGAACAAAACTGAACAG................................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TCTTTCCGCACAGAACAAAACTGAA...................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AAAACTGAACAGAAACGAATC.......................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGAACAGAAACGAATCCGGTTGC................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GAACAAAACTGAACAGAA................................. 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGAACAGAAACGAATCC......................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................TCACATCACCGCTTT 15 1 9 1.67 15 0 0 0 0 0 0 15 0 0 0 0 0
..............................................................AATTGAGTGAGAGGGAGAGCAA...................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................GCACAGAACAAAACTGAAC..................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CAAAACTGAGCAGAAACGAATC.......................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AAAACTGAACAGAAACGAATCC......................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................ATTGTTTGTCTTTCCGCACA................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGAACAGAAACGAATCCGGTTGCCGG................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CGCACAGAACAAAACTGAAC..................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GAACAAAACTGAACAGAAACGAA............................ 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................TTCCGCACAGAACAAAACTGAACAGA.................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGAACAGAAACGAATCCGGTTGC................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................GCGCATTTGACGATTGTTTGTCTTTCCG....................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AACTGAACAGAAACGAATCCGGT...................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CCGCACAGAACAAAACTGAACAGAAA................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................ATTTGACGATTGTTTGTCC............................................................ 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGAACAAAACTGAACAGAAACGA............................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TTGACGATTGTTTGTCTTT.......................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ACAAAACTGAACAGAAACGAATCC......................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CTTTCCGCACAGAACAAAACTG........................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ACAAAACTGAACAGAAAC............................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AACTGAACAGAAACGAATC.......................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TTCCGCACAGAACAAAACTGG....................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CTTTCCGCACAGAACAAAAC.......................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CTTTCCGCACAGAACAAAACTGAA...................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CACTCGGTTTCTCACTCACT............................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CAAAACTGAACAGAAACGAATCCGGG...................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CCGCACAGAACAAAACTGAACAGAA................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CCGCACAGAACAAAACTGAACA.................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................GCACAGAACAAAACTGAACAGAA................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................GTCGGTTTCTCACTCACTA............................................................................................................................ 19 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................CACTCGGTTTCTCACTCACTCAA.......................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................CTGAACAGAAACGAATCCGG....................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGAACAGAAACGAATCCGGTTGCCGGT............... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CGCACAGAACAAAACTGAA...................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CCGCACAGAACAAAACTGA....................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TCTTTCCGCACAGAACAAAACTG........................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................AATTGAGTGAGAGGGAGAGCA....................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................TCCGCACAGAACAAAACTGAAC..................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CCGCACAGAACAAAACTGAACAC................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AAACTGAACAGAAACGAATC.......................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CAGAACAAAACTGAACAGAA................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................CACAGAACAAAACTGAACAG................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CCGCACAGCACAAAACTG........................................ 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GCATTTGACGATTGTTTGTCTT........................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ACTGAACAGAAACGAATCCGGTTGC................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GAACAGAAACGAATCCGGTTG.................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGAACAAAACTGAACAGAAACGAA............................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CTTTCCGCACAGAACAAAACTGAACAGA.................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................GTCTTTCCGCACAGAACAAAACTGA....................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................ACAGAACGAAACTGAACAGAATCG.............................. 24 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................TTCCGCACAGAACAAAACTGAAC..................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................GTTTGTCTTTCCGCACAGAACAAAACTGA....................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................ATTTGACGATTGTTTGTC............................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................GTCTTTCCGCACAGAACAAAACTG........................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................GCGCATTTGACGATTGTTTGTCTT........................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TTCCGCACAGAACAAAACTG........................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................CACAGAACAAAACTGAAC..................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GCATTTGACGATTGTTTGT.............................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ACTGAACAGAAACGAATCCGGTT..................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................AATTGAGTGAGAGGGA............................................................................................................................................................................ 16 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0
..............................................................................................................................................................................................................GCTGAACAGAAACGAATC.......................... 18 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGAATTGAATCCGGTTGCCGGTC.............. 23 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GAATCCGTTTGCCGGT............... 16 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................TAAGAGGGAGCGCAGGAG................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1
......................................................................................................................................................................................GTTTGCCCTTCCGTACAGA................................................. 19 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 2
...........................................................................................................................................................................................................................GAATCCGTTTGCCGG................ 15 1 11 0.09 1 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................CTCAGAACAAAACTCAA...................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
..............................................................................................................................................................................TGAGGATTGTTTGTATT........................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................................ATTTTGACGATTGTTTGT.............................................................. 18 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GTCACTTCGCGAGAAGGGTGTTGTGAACGGACGGTAAACCTTATAAATATTCGGGTCGCCGATTAACTCACTCTCCCTCTCGTCCTCTCGCCAGTCGATCAGTGAGTGAGCCAAAGAGTGAGTGAGTCGGCCGCCGGCAAATAAACGGCGAAGGAGTTTAGTAAATTCGCGTAAACTGCTAACAAACAGAAAGGCGTGTCTTGTTTTGACTTGTCTTTGCTTAGGCCAACGGCCAAGTGTAGTTGCGAAA

************************************************(((.((..((..(((.....)))..))..)).))).((..((((((.........))))))..))............(((.....(((((....)))))....)))......****************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934

dsim w501 ovaries

 M023

head

 M024

male body		 O001

Testis

 O002

Head

 SRR553488

RT_0-2 hours eggs

 SRR553487

NRT_0-2 hours eggs

 SRR553486

Makindu_3 day-old ovaries

 SRR553485

Chicharo_3 day-old ovaries
...........................................................................................................................................................................................................................................AGTGTAGTGGCGAAA 15 1 9 5.00 45 45 0 0 0 0 0 0 0 0
......................................................................................................................................................................TCGCGTAAACTGCTAACAAAC............................................................... 21 0 1 2.00 2 0 1 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................................AAGTGTAGTGGCGAAA 16 1 3 1.33 4 4 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGCTTAGGCCAACGGCCAA.............. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................ACAGAAAGGCGTGTCTTGTT............................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................AAATAAACGGCGAAGGAGTTTA.......................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................AACTCACTCTCCCTCTCGTCCT.................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................................ACGGCCAAGTGTAGTTGCGAA. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
GTCACTTCGCGAGAT........................................................................................................................................................................................................................................... 15 1 3 0.33 1 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................AGGCGAGTCTTGTTTTG.......................................... 17 1 6 0.17 1 1 0 0 0 0 0 0 0 0
.TCACGTCGCGAGAAGGT........................................................................................................................................................................................................................................ 17 2 18 0.11 2 0 0 0 0 0 0 1 0 1
.................................................................................................................................GCCGGCGGCAAATGAAC........................................................................................................ 17 2 20 0.10 2 0 0 0 0 0 0 0 2 0
.........................................................................................................................................................................................................................................TAAGTGTAGTGGCGAAA 17 2 14 0.07 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................GGCTACGGAGATTAGTAAA..................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:12078157-12078406 - dsi_22828 CAGTGAA---GCGCTCTTCCCACAACACTTGCC---------TG-CCATTTGGAA--------TATTTATAAGCCCAGCGGCTAATTGAGTGAGAGGGAG-----AGC----AG----------------GAGA--------GCGG----TCA-G-------------------CT----------------AGTCACTCACTCGGTTTC------------TCACTCACTCAG------------------------------------------------------------------------------------C-----------------CGG--CGGCCGTTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTTGACGATTGTTTGTCTTTCCGCACAGAACAAAACTGAACAGAAAC--GAA---------------------T-CCGGTT-GCCGGT-------------------------------TCA-------CATCAACGCTTT-
droSec2 scaffold_16:612251-612500 - CAGTGAA---GCGCTGTTCCCACAACACTTGCC---------TG-CCATTTGGAA--------TATTTATAAGCCCGGCGGCTAATTGAGTGAGAGGGAG-----AGC----AA----------------GAGA--------GCGG----TCA-G-------------------CT----------------AGTCACTCACTCGGTTTC------------TCACTCACTCAG------------------------------------------------------------------------------------C-----------------CGG--CGGCCGTTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTTGACGATTGTTTGTCTTTCCGCACAGAACGAAACTGAACAGAATC--GAA---------------------T-CCGGTT-GCCGGT-------------------------------TCA-------CATCAACGCTTC-
dm3 chr2L:12421780-12422040 - sblock216052 CAGTGTA---GCGCTCTTCCCACAACACTTGCC------GCCTG-CCATTTGGAA--------TATTTATAAGCCCAGCGGCTAATTGAGTGAGAGGGAG-----AGC----AA----------------GAGA--------GCGG----TCA-G-------------------CT----------------AGTCACTCACTCGGTTTC----TCACTCGCTCACTCACTCAG------------------------------------------------------------------------------------C-----------------CGG--CCGCCGTTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTTGACGATTGTTTGTCTTTCCGCACAGAACAAAACTGAACAGAATC--GAA---------------------T-CCGGTT-GCCGGT-------------------------------CCA-------CATCAACGCATC-
droEre2 scaffold_4929:12994712-12994960 + CAGTGAA---GCGCTCATCCCACAACACTTGTC---------TG-CCATTCGGAA--------TATTTATAAAAGCAGCGACTAATTGAGTGAGAGGGAG-----AGC----GA----------------GAGA--------GCGG----TCA-G-------------------CT----------------AGTCACTCACTCGGTTTC------------TCACTCACTCAC--------------------------------------------TCGA------------------------------------C-----------------CGC--CCGCCGTTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTTGACGATTGTTTGTCTTTCCGCACAGAACAG-----AACAGAATC--GAA---------------------T-CCGGTT-GCCGGT-------------------------------CCA-------CATCAACGCTTC-
droYak3 2L:8857983-8858231 - CAGTGAA---GCGCTCTTCCCACAACACTTGTC---------TG-CCATTTGGAA--------TATTTATAAACCCAGCGACTAATTGAGTGAGAGGGAG-----AGC----GA----------------GAGA--------GCGG----TCA-G-------------------CT----------------AGTCACTCACTCGGTTTC------------TCACTCACTCAC------------------------------------------------------------------------------------C-----------------CGA--CCGCCGTTTAT-TGCCGCTTCCTCAAATCATTTAAGCGCATTTGACGATTGTTTGTCTTTCCGCACAGAACAGAACAGAACAGAATC--GAA---------------------T-CCGGTT-GCCGGT-------------------------------CCA-------CATCAACGCCTA-
droEug1 scf7180000409122:808379-808621 - TGGTGAA---GCGGTCTTCCCACAACACTTTGT------TC-TGTCCATCTAGAA--------TATTTATAAAACCAGCGACTAATTGAGTGAGAGGGAG-----AGT----GA----------------GAGA--------GCGG----TCA-T-------------------TT----------------AGTCACTCACTCGGTTTC------------TCACTCACTCGC------------------------------------------------------------------------------------T-----------------TGC--TTTCCGTTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTTGACGATTGTTTGTCTTTCCACACAGAACAG----------AATC--GAA---------------------T-CTAGTT-GCCGGT-------------------------------TCA-------CAACAACTTTTT-
droBia1 scf7180000302422:556700-556927 + CCGTAAG---CCGTGCTTCCCACAACACTTGGC---------TGACCATTTAGAGTACGTGTATATTTATAAACACAGCGACTAATTGAGTGAGAGGGAG-----AGT----GC----------------GAGA--------GTGG----CCC-G-------------------CG----------------ACTCACTCAGTCGGTTTC------------CCACTCACTC---------------------------------------------------------------------------------------------------------GC--CTGCCGCTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTCGACGACTGTTTGTCTTTCCACCCAGAACGC----------A------------------------------------------GC-------------------------------CTA-------CAGCAGCGCTTA-
droTak1 scf7180000415865:175488-175725 + CGGTAGA---GCGTTCTTCCCACAACACTTGGA---------TGTCCATTTAGAATACATGTATATTTATAAACCCACCGACTAATTGAGTGAGAGGGAG-----AGT----GA----------------GAGA--------GCAA----T-------------------------------------------TCACTCACTCGGCTTC------------TCAGTCACTC---------------------------------------------------------------------------------------------------------GC--TTGCCGTTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTTGACGATTGTTTGCCTTTCCACACAGAACAG----------AATC--GAA---------------------T-CTGGTC-GCCGGT-------------------------------CTA-------CATCAACGTTTT-
droEle1 scf7180000491028:2693463-2693693 + CAGTAAA---ACGTTCTTCCCACAACACTTGGC---------TGCCCATTTAGAA--------TATTTATAAGCCCAGCGACTAATTGAGTGAGA-----------GT----GA----------------GAGA--------GCGG----TCA-G--------------------T----------------ATTCACTCACTCGGCTGC------------TCACTCACTC---------------------------------------------------------------------------------------------------------GC--TTGCCGTTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTTCACGATTGTTTGTCTTTCCACACAGAACAG----------ATTC--GAA---------------------T-CTGGTT-GTCGGT-------------------------------GTA-------CATCAACGTTTTA
droRho1 scf7180000780043:276935-277172 - CAGTAAA---ACGTTCTTCCCACAACACTTGGC---------TGCCCATTTAGAA--------TATTTATAAACCCAGCGACTAATTGAGTGAGAGGGAG-----AGT----GA----------------GAGA--------GCGG----TCA-G-------------------TT----------------GTTCACTCACTCGGCTAC------------TCACTCACTC---------------------------------------------------------------------------------------------------------GC--TTGCCGTTTATTTGCCGCTTCCTCAAATTATTTAAGCGCATTTGACGATTGTTTGTCTTTCCACACAGAACAA----------AATC--GAA---------------------T-CTGGTT-GCCGGT-------------------------------GTA-------CATCCACGTTTAA
droFic1 scf7180000454015:306198-306460 - CAGTAGA---GCGTTCTTCCCACAACACTTGGCCGTCCATC-CGTCCATTTGGAA--------TATTTATAAACCCAGCGAATAATTGAGTGAGAGGGATA-GGGAGT----GT--AAGAGCAAGAGCGAGAGA--------GCGG----TCA-G-------------------CT----------------ATTCACTCACTCATTTAG------------CCACTCATTC---------------------------------------------------------------------------------------------------------GC--TTGCCGTTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTTCACGATTGTTTGTCTTTCCACACAGAACAG----------AATC--GAA---------------------T-CTGCCT-GCCGGT-------------------------------GAA-------CATCAACGTTTT-
droKik1 scf7180000301476:521733-522031 - CAGCAAA---GGGTTCTTCCCACAG--------------------CTATTTAGAA--------TATTTTTAAACCCAGCGACTAATTGAGAGAGC--GAG-----AGT----GT----------------CAC--TCATT--GAGGCCCCTCA-G-------------------------------------------TCACTCATTTAC------------TCACTCACTCCCTCTCTTTTCCCCCAGTCGCACCCTCTCTTTCTCTGCTATAGCACTCTCTCTTTCTGAT------------------TCC-ATAGCCGGGTCTC----------GT--TCGCCGCTTATTTACCGCTTCCTCAAATCATTTAAGCGCATTTGACGATTGTTTGCCTTTCCACACAGAACAG----------AATCTCGAA---------------------T-CTAGTTAGCCG-----------------------------------A-------CATTTACACTAA-
droAna3 scaffold_12916:12976648-12976938 + T---CCA---GTGTGCCTCCCACTGCACTCGGCTGG----C-TGTCCATTTAAAA--------TATTTATAAACACAGCGACTAATTGAATGAGCGGGTG-----AGT----GA----------------GAGT--------GTCG----GCA-G-------------------TTGCTCGTTGTACTCACAA-----GTACTCACTTTC------------ACACTCATTGGA----------------------------------------------AG------CGGT------------------TCC--CAGCTCGGTTTCGTTTGCGGCCGCCGTTGCCGTTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTTGACTATTGTTTGTCTTTCAACACAGAACAG----------ACCC--GAATC----------------CATT-CTAGTTGGCCGGC-------------------------------GTAAA-TA--A---AATAACTC-
droBip1 scf7180000396580:543849-544139 - GAGTG----------CCTACCACTGCACTCGGC---------TGTCCATTTAAAA--------TATTAATAAACACAGCGACTAATTGAATGAGCGGGTG-----AGT----GA----------------GAGT--------GTCG----CCAAG-------------------TTGCTCGTTGTACTCGCAA-----GTACTCACTTTC------------ACACTCATTGGC----------------------------------------------AG------CGGT------------------TCC--CAGCTCGGTTTCGTGTG----CTG--CCGCCGTTTATTTGCCGTTTCCTCAAATCATTTAAGCGCATTTGACTATTGTTTGTCTTTCAACACAGAACAGAACAGAACAGAACA--GA-----------CCAGAATCCCAT-CTAGTTGGCCGGC-------------------------------GCAGA-----TAAAAACGC----
dp5 4_group3:5666771-5667023 + ------------------------------------------------------------------------------------AT----TGAGAGGGAG-----AGT----GT----------------GAGAGCAAGCGAGCGG----TCA-GCGTCAACGTCAGCGTCAGGCT----------------AGCCACTCACTCAATCGCTCTCCCTCACGCCCTCTCATT-----------------------------------------------------------------------------------------CGGTTTC----------GT--TTGCCGTTTATTTGCCGTTTCCTCAAATCATTTAAGCGCATTTGAGAATTGTTTGCCTTTCCATACAGAACCG----------AAACCGAAC--CGAACAGAACAGAG--CCGC-CTAGTTAACCGGCGAAACGCAGAAAATATACAACAGACA---TC--G--GAA--CA-----------
droPer2 scaffold_1:7158036-7158288 + ------------------------------------------------------------------------------------AT----TGAGAGGGAG-----AGT----GT----------------GAGAGCAAGCGAGCGG----TCA-GCGTCAACGTCAGCGTCAGGCT----------------AGCCACTCACTCAATCGCTCTCCCTCACGCCCTCTCATT-----------------------------------------------------------------------------------------CGGTTTC----------GT--TTGCCGTTTATTTGCCGTTTCCTCAAATCATTTAAGCGCATTTGAGAATTGTTTGCCTTTCCATACAGAACCG----------AAACCGAAC--CGAACAGAACAGAG--CCGA-CTAGTTAACCGGCGAAACGCAGAAAATATACAACAGACA---TC--G--GAA--CA-----------
droWil2 scf2_1100000004521:10167968-10168316 - TATTATATATAAATTGTTCCCACAGCATTTAAA---------TG-AAATGTA-TT--------TATTTTTAA-CGC-TCGACTAATTGAGTGACGAAAAGGGG--GGCAGATGGCAAAGAGCTA------CAGT----------------TGA-G---------------------------------------TGAATGAGTGATT----------------C-TTCTCTCCCTCTCTTTTTGTCT-TTCTCTTTCTCTCTGTCTCTGTTAG-TCACTCAATTTAGGTGAGAGACTCAATGTTGTCCCCTCCAACAAGTAGGTTTCA---------GT--TTG--CTTTATTTGCCGTTTCCTCAAATCATTTAAGCACATTTCACAATTGTTTGTCTTTCCCGACAGAACGC----------AAAATAAAA--TTTACAAAAA--------------AAA-AAAAAA-------------------------CCTA--AAC-C-TACTAAAGACTGTTTG-
droMoj3 scaffold_6500:22601974-22602071 - C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTATTTGCCGTTTCCTCGACGCATTTCAGCGCATTTGACTATTGTTTGTCTTACGAAACAG---------------AACC--AAA---------------------T-CCGGCA-ACCGGT-------------------------G-----CCA----------GAACAATTC-
droGri2 scaffold_15252:14983901-14984007 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATTTGTTCTTTCCTCAACACATTTCAGCGCATTTGACTATTGTTTGTCATACGAAACAGAACAG----------AATC--GGAATTGA----------------AATCGAAA-ACCGGT-------------------------GTTG--CCA-------CAACAA-------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CAGTGAA---GCGCTCTTCCCACAACACTTGCC---------TG-CCATTTGGAA--------TATTTATAAGCCCAGCGGCTAATTGAGTGAGAGGGAG-----AGC----AG----------------GAGA--------GCGG----TCA-G-------------------CT----------------AGTCACTCACTCGGTTTC------------TCACTCACTCAG------------------------------------------------------------------------------------C-----------------CGG--CGGCCGTTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTTGACGATTGTTTGTCTTTCCGCACAGAACAAAACTGAACAGAAAC--GAA---------------------T-CCGGTT-GCCGGT-------------------------------TCA-------CATCAACGCTTT-SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACAGAACAAAACTG........................................................................................................18157.0057488000100000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACAGAAAC--GAA---------------------T-C..................................................................18111.001171210000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGAACAAAACTGAACAGAAA................................................................................................25110.0010100000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACAGAACAAAACTGAACAG...................................................................................................2319.00990000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACAGAACAAAACTGAACAGA..................................................................................................2418.00880000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCACAGAACAAAACTGAACAG...................................................................................................2418.00861100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGAACAAAACTGAACAGA..................................................................................................2316.00632100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGAACAAAACTGAACAGAAAC--.............................................................................................2614.00411200000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCACAGAACAAAACTG........................................................................................................1914.00440000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACAGAACAAAACTGAA......................................................................................................2014.00440000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GCATTTGACGATTGTTTG...............................................................................................................................1813.00321000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGAAAC--GAA---------------------T-CCGGTT-G...........................................................2013.00330000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAAAACTGAACAGAAAC--GAA---------------------T-CC.................................................................2313.00330000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TTTCCGCACAGAACAAAACTG........................................................................................................2113.00330000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGAACAAAACTGAACAGAAAC--G............................................................................................2713.00303000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAAAACTGAACAGA..................................................................................................1813.00330000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAAAACTGAACAGAAAC--G............................................................................................1813.00320000100000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAAACTGAACAGAAAC--GAA---------------------T-C..................................................................2513.00330000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACAGAACAAAACTGAACAGAAAC--.............................................................................................2712.00211000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACAGAACAAAACTGAAC.....................................................................................................2112.00200001100000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCACAGAACAAAACTGAA......................................................................................................2112.00220000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAACAAAACTGAACAG...................................................................................................1912.00202000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGAACAAAACTGAACAGAA.................................................................................................2412.00220000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACAGAAAC--GAA---------------------T-CC.................................................................1912.00220000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGAACAAAACTGAACAG...................................................................................................2212.00220000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCCGCACAGAACAAAACTGAA......................................................................................................2512.00220000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTGAACAGAAAC--GAA---------------------T-C..................................................................2112.00220000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACAGAAAC--GAA---------------------T-CCGGTT-GC..........................................................2312.00220000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAAACTGAACAGAA.................................................................................................1812.00220000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACAGAAAC--GAA---------------------T-CC.................................................................1812.00220000000000000000
...................................................................................AATTGAGTGAGAGGGAG-----AGC----AA----------------.........................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................GCACAGAACAAAACTGAAC.....................................................................................................1911.00110000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTGAACAGAAAC--GAA---------------------T-CC.................................................................2211.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTTGTCTTTCCGCACA...................................................................................................................2011.00100001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACAGAAAC--GAA---------------------T-CCGGTT-GCCGG.......................................................2611.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGAACAAAACTGAAC.....................................................................................................2011.00100000100000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAAACTGAACAGAAAC--GAA---------------------.....................................................................2311.00100001000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTCCGCACAGAACAAAACTGAACAGA..................................................................................................2611.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACAGAAAC--GAA---------------------T-CCGGTT-GC..........................................................2411.00110000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GCGCATTTGACGATTGTTTGTCTTTCCG.......................................................................................................................2811.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AACTGAACAGAAAC--GAA---------------------T-CCGGT..............................................................2311.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACAGAACAAAACTGAACAGAAA................................................................................................2611.00110000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ATTTGACGATTGTTTGTCC............................................................................................................................1911.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAAAACTGAACAGAAAC--GA...........................................................................................2311.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TTGACGATTGTTTGTCTTT..........................................................................................................................1911.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAACTGAACAGAAAC--GAA---------------------T-CC.................................................................2411.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCGCACAGAACAAAACTG........................................................................................................2211.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAACTGAACAGAAAC--.............................................................................................1811.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AACTGAACAGAAAC--GAA---------------------T-C..................................................................1911.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTCCGCACAGAACAAAACTGG.......................................................................................................2111.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCGCACAGAACAAAAC..........................................................................................................2011.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCGCACAGAACAAAACTGAA......................................................................................................2411.00110000000000000000
.......................................................................................................................................................................................................CACTCGGTTTC------------TCACTCACT....................................................................................................................................................................................................................................................................................................2011.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAAAACTGAACAGAAAC--GAA---------------------T-CCGGG..............................................................2611.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACAGAACAAAACTGAACAGAA.................................................................................................2511.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACAGAACAAAACTGAACA....................................................................................................2211.00110000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GCACAGAACAAAACTGAACAGAA.................................................................................................2311.00110000000000000000
.......................................................................................................................................................................................................CACTCGGTTTC------------TCACTCACTCAA------------------------------------------------------------------------------------.............................................................................................................................................................................................................2311.00100000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACAGAAAC--GAA---------------------T-CCGG...............................................................2011.00110000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACAGAAAC--GAA---------------------T-CCGGTT-GCCGGT-------------------------------.......................2811.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGAACAAAACTGAA......................................................................................................1911.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACAGAACAAAACTGA.......................................................................................................1911.00100000100000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCCGCACAGAACAAAACTG........................................................................................................2311.00101000000000000000
...................................................................................AATTGAGTGAGAGGGAG-----AGC----A..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCACAGAACAAAACTGAAC.....................................................................................................2211.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACAGAACAAAACTGAACAC...................................................................................................2311.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGAACAGAAAC--GAA---------------------T-C..................................................................2011.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACAAAACTGAACAGAA.................................................................................................2011.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................CACAGAACAAAACTGAACAG...................................................................................................2011.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GCATTTGACGATTGTTTGTCTT...........................................................................................................................2211.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACAGAAAC--GAA---------------------T-CCGGTT-GC..........................................................2511.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGAAAC--GAA---------------------T-CCGGTT-G...........................................................2111.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAAAACTGAACAGAAAC--GAA---------------------.....................................................................2411.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCGCACAGAACAAAACTGAACAGA..................................................................................................2811.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GTCTTTCCGCACAGAACAAAACTGA.......................................................................................................2511.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTCCGCACAGAACAAAACTGAAC.....................................................................................................2311.00100000100000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTCTTTCCGCACAGAACAAAACTGA.......................................................................................................2911.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ATTTGACGATTGTTTGTC.............................................................................................................................1811.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GTCTTTCCGCACAGAACAAAACTG........................................................................................................2411.00110000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GCGCATTTGACGATTGTTTGTCTT...........................................................................................................................2411.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTCCGCACAGAACAAAACTG........................................................................................................2011.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................CACAGAACAAAACTGAAC.....................................................................................................1811.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GCATTTGACGATTGTTTGT..............................................................................................................................1911.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACAGAAAC--GAA---------------------T-CCGGTT-............................................................2311.00110000000000000000
...................................................................................AATTGAGTGAGAGGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................1620.50100000010000000000
droSec2
CAGTGAA---GCGCTGTTCCCACAACACTTGCC---------TG-CCATTTGGAA--------TATTTATAAGCCCGGCGGCTAATTGAGTGAGAGGGAG-----AGC----AA----------------GAGA--------GCGG----TCA-G-------------------CT----------------AGTCACTCACTCGGTTTC------------TCACTCACTCAG------------------------------------------------------------------------------------C-----------------CGG--CGGCCGTTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTTGACGATTGTTTGTCTTTCCGCACAGAACGAAACTGAACAGAATC--GAA---------------------T-CCGGTT-GCCGGT-------------------------------TCA-------CATCAACGCTTC-SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACAGAACGAAACTG........................................................................................................1816.0060024
...................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGAATC--GAA---------------------T-CCGGT..............................................................1812.0020020
...................................................................................AATTGAGTGAGAGGGAG-----AGC----A..........................................................................................................................................................................................................................................................................................................................................................................................................................2112.0021100
............................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCCGCACAGAACGAAACTGAA......................................................................................................2512.0020101
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATC--GAA---------------------T-CCGGTT-GCCGG.......................................................2111.0010001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTT-GCCGGT-------------------------------TCA-------CATCAACGC....2311.0010001
.............................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCGCACAGAACGAAAC..........................................................................................................2011.0010001
........................................................................................................................................................................................................................................................................................................................................................................................................................GAACGAAACTGAACAGAAT................................................................................................1911.0010001
..........................................................................................................................................................................................................................................................................................................................................................................................................TGTCTTTCCGCACAGAACGAA............................................................................................................2111.0010001
............................................................................................................................................................................................................................................................................................................................................................................................................................GAAACTGAACAGAATC--GAA---------------------T-CCGGT..............................................................2511.0010001
...................................................................................AATTGAGTGAGAGGGAG-----AGT----...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
..........................................................................................................................................................................................................................................................................................................................................................................................GCATTTGACGATTGTTTGTCTTTCCG.......................................................................................................................2611.0010001
........................................................................................................................................................................................................................................................................................................................................................................................................................................AATC--GAA---------------------T-CCGGTT-GCCGGT-------------------------------TCA-------CATCA........2811.0011000
............................................................................................................................................................................................................................................................................................................................................................................................................................GAAACTGAACAGAATC--GAA---------------------T-C..................................................................2111.0011000
.............................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCGCACAGAACGAA............................................................................................................1811.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACGAAACTGAACAGG..................................................................................................1911.0010001
.................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACAGAACGAAACTGAA......................................................................................................2011.0010001
......................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACGAAACTGAACAGAA.................................................................................................2011.0010001
................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCACAGAACGAAACTGAACA....................................................................................................2311.0010001
...................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGAATC--GAA---------------------T-CCGGTT-GCCGGT-------------------------------.......................2511.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACAGAACGAAACTGAACAGA..................................................................................................2411.0010100
....................................................................................................................................................................................................................................................................................................................................................................................................................CACAGAACGAAACTGAACAGAATC--GA...........................................................................................2611.0010001
.............................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGAACAGAATC--GAA---------------------T-CCGGT..............................................................2411.0010001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GAATC--GAA---------------------T-CCGGTT-GCCGGT-------------------------------T......................2211.0011000
...................................................................................................................................................................................................................................................................................................................................................................................................................GCACAGAACGAAACTGAACA....................................................................................................2011.0010010
....................................................................................ATTGAGTGAGAGGGAG-----AG................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
.........................................................................................................AGC----AA----------------GAGA--------GCGG----TCA-G-------------------CT----------------AGTCACTC...................................................................................................................................................................................................................................................................................................................................2711.0010010
dm3
CAGTGTA---GCGCTCTTCCCACAACACTTGCC------GCCTG-CCATTTGGAA--------TATTTATAAGCCCAGCGGCTAATTGAGTGAGAGGGAG-----AGC----AA----------------GAGA--------GCGG----TCA-G-------------------CT----------------AGTCACTCACTCGGTTTC----TCACTCGCTCACTCACTCAG------------------------------------------------------------------------------------C-----------------CGG--CCGCCGTTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTTGACGATTGTTTGTCTTTCCGCACAGAACAAAACTGAACAGAATC--GAA---------------------T-CCGGTT-GCCGGT-------------------------------CCA-------CATCAACGCATC-SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM231091

Ovary		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

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......................................................................................TGAGTGAGAGGGAG-----AGC----AA----------------GAGA--------GCGG----.....................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AACTGAACAGAATC--GAA---------------------T-CCG................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................CACAGAACAAAACTGAACAGAATC--G............................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................CACAGAACAAAACTGAACAGAATC--GAA---------------------.....................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................ATTGAGTGAGAGGGAG-----AGC----AA----------------G........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAATC--GAA---------------------T-CCGGTT-G...........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAAACTGAACAGAATC--GAA---------------------.....................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AACAAAACTGAACAGAATC--GAA---------------------T-...................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATC--GAA---------------------T-CCGGTT-GCCGGT-------------------------------.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TC--GAA---------------------T-CCGGTT-GCCGGT-------------------------------CCG-------.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CGATTGTTTGTCTTTCCT.......................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
..............................................CATTTGGAA--------TATTTATAAGCCCAGCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AATC--GAA---------------------T-CCGGTT-GCCGGT-------------------------------CC.....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTGAACAGAATC--GAA---------------------T-C..................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTGAACAGAATC--GAA---------------------T-CCG................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................TCACTCGCTCACTCACTCAG------------------------------------------------------------------------------------C-----------------CG.........................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACAAAACTGAACAGAATC--GAA---------------------T-...................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AACAAAACTGAACAGAATC--GAA---------------------T-C..................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GTGTA---GCGCTCTTCCCACAACACTTGCC------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACAGAATC--GAA---------------------T-CC.................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................C--GAA---------------------T-CCGGTT-GCCGGT-------------------------------CCA-------CATCG........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACAAAACTGAACAGA..................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATC--GAA---------------------T-CCGGTT-GCC.........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAAAACTGAACAGAAT................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGAACAGAATC--GAA---------------------.....................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGAATC--GAA---------------------T-CCGGG..............................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GCATTTGACGATTGTTTT...............................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................ATTGAGTGAGAGGGAG-----AGT----...........................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..................................................................................................AG-----AGC----AA----------------GAGA--------GCGG----TCA-A-------------------GC----------------...........................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GCATTTGACGATTGTTTA...............................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CAGTGAA---GCGCTCATCCCACAACACTTGTC---------TG-CCATTCGGAA--------TATTTATAAAAGCAGCGACTAATTGAGTGAGAGGGAG-----AGC----GA----------------GAGA--------GCGG----TCA-G-------------------CT----------------AGTCACTCACTCGGTTTC------------TCACTCACTCAC--------------------------------------------TCGA------------------------------------C-----------------CGC--CCGCCGTTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTTGACGATTGTTTGTCTTTCCGCACAGAACAG-----AACAGAATC--GAA---------------------T-CCGGTT-GCCGGT-------------------------------CCA-------CATCAACGCTTC-SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGAATC--GAA---------------------T-CCGGT..............................................................1813.0030000030
..........................................................................................................................................................................................................................................................................................................................................................................................GCATTTGACGATTGTTTGT..............................................................................................................................1912.0020000020
...................................................................................................................................................................................................................................................................................................................................................................................................................GCACAGAACAG-----AACAGAATC--.............................................................................................2012.0020100100
........................................................................................................................................................................................................................................................................................................................................................................................................................GAACAG-----AACAGAATC--GAA---------------------.....................................................................1812.0020000020
................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCACAGAACAG-----AACAGAATC--GAA---------------------.....................................................................2611.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAG-----AACAGAATC--GAA---------------------T-CC.................................................................1811.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................TTCCGCACAGAACAG-----AACAGAAT................................................................................................2311.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGAACAG-----AACAGAATC--GA...........................................................................................2311.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCACAGAACAG-----AACAGA..................................................................................................2011.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................C--GAA---------------------T-CCGGTT-GCCGGT-------------------------------CCA-------CATC.........2411.0010010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAACAG-----AACAGAATC--G............................................................................................1911.0011000000
droYak3
CAGTGAA---GCGCTCTTCCCACAACACTTGTC---------TG-CCATTTGGAA--------TATTTATAAACCCAGCGACTAATTGAGTGAGAGGGAG-----AGC----GA----------------GAGA--------GCGG----TCA-G-------------------CT----------------AGTCACTCACTCGGTTTC------------TCACTCACTCAC------------------------------------------------------------------------------------C-----------------CGA--CCGCCGTTTAT-TGCCGCTTCCTCAAATCATTTAAGCGCATTTGACGATTGTTTGTCTTTCCGCACAGAACAGAACAGAACAGAATC--GAA---------------------T-CCGGTT-GCCGGT-------------------------------CCA-------CATCAACGCCTA-SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACAGAATC--GAA---------------------T-CC.................................................................1814.00440000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACAGAACAGAACAGAATC--GAA---------------------T-CC.................................................................2813.00330000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAGAACAGAACAGAATC--GAA---------------------T-CC.................................................................2712.00220000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-GCCGGT-------------------------------CCA-------CATCAA.......1812.00220000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GCACAGAACAGAACAGAACAGAATC--GAA---------------------.....................................................................2811.00110000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAATC--GAA---------------------T-CCGGTT-GCC.........................................................2111.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAACAGAACAGAACAGAATC--GAA---------------------T-CC.................................................................2911.00110000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GCATTTGACGATTGTTTGT..............................................................................................................................1911.00110000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAGAATC--GAA---------------------T-CCGGTT-............................................................2111.00110000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCCGCACAGAACAGAACAGAAC.....................................................................................................2611.00110000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAACAGAACAGAATC--.............................................................................................1811.00110000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGAACAGAACAGAACAG...................................................................................................2211.00110000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACAGAACAGAATC--GAA---------------------T-CC.................................................................2311.00110000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAATC--GAA---------------------T-CCGGTT-GCC.........................................................2011.00110000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGAACAGAATC--GAA---------------------T-CCGGTT-GCC.........................................................2811.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGAATC--GAA---------------------T-CCGGTT-GCCGGT-------------------------------.......................2611.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCACAGAACAGAACAGAAC.....................................................................................................2211.00110000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGAACAGAATC--GAA---------------------.....................................................................1811.00100001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACAGAACAGAACAGAACAGAATC--.............................................................................................2711.00110000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................C--GAA---------------------T-CCGGTT-GCCGGT-------------------------------C......................1811.00110000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AATC--GAA---------------------T-CCGGTT-GCCGGT-------------------------------CC.....................2211.00110000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACAGAACAGAACAGAAC.....................................................................................................2111.00110000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................CACAGAACAGAACAGAAC.....................................................................................................1840.75330000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GCACAGAACAGAACAGAAC.....................................................................................................1920.50110000000000
.............................................................................................GAGGGAG-----AGC----GA----------------GAGA--------GCG..........................................................................................................................................................................................................................................................................................................................................................................................1930.33101000000000
...........................................................................................GAGAGGGAG-----AGC----GA----------------GAGA--------.............................................................................................................................................................................................................................................................................................................................................................................................1850.20100000010000
droEug1
TGGTGAA---GCGGTCTTCCCACAACACTTTGT------TC-TGTCCATCTAGAA--------TATTTATAAAACCAGCGACTAATTGAGTGAGAGGGAG-----AGT----GA----------------GAGA--------GCGG----TCA-T-------------------TT----------------AGTCACTCACTCGGTTTC------------TCACTCACTCGC------------------------------------------------------------------------------------T-----------------TGC--TTTCCGTTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTTGACGATTGTTTGTCTTTCCACACAGAACAG----------AATC--GAA---------------------T-CTAGTT-GCCGGT-------------------------------TCA-------CAACAACTTTTT-SizeHit CountTotal NormTotal
No Reads
droBia1
CCGTAAG---CCGTGCTTCCCACAACACTTGGC---------TGACCATTTAGAGTACGTGTATATTTATAAACACAGCGACTAATTGAGTGAGAGGGAG-----AGT----GC----------------GAGA--------GTGG----CCC-G-------------------CG----------------ACTCACTCAGTCGGTTTC------------CCACTCACTC---------------------------------------------------------------------------------------------------------GC--CTGCCGCTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTCGACGACTGTTTGTCTTTCCACCCAGAACGC----------A------------------------------------------GC-------------------------------CTA-------CAGCAGCGCTTA-SizeHit CountTotal NormTotal
No Reads
droTak1
CGGTAGA---GCGTTCTTCCCACAACACTTGGA---------TGTCCATTTAGAATACATGTATATTTATAAACCCACCGACTAATTGAGTGAGAGGGAG-----AGT----GA----------------GAGA--------GCAA----T-------------------------------------------TCACTCACTCGGCTTC------------TCAGTCACTC---------------------------------------------------------------------------------------------------------GC--TTGCCGTTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTTGACGATTGTTTGCCTTTCCACACAGAACAG----------AATC--GAA---------------------T-CTGGTC-GCCGGT-------------------------------CTA-------CATCAACGTTTT-SizeHit CountTotal NormTotal
No Reads
droEle1
CAGTAAA---ACGTTCTTCCCACAACACTTGGC---------TGCCCATTTAGAA--------TATTTATAAGCCCAGCGACTAATTGAGTGAGA-----------GT----GA----------------GAGA--------GCGG----TCA-G--------------------T----------------ATTCACTCACTCGGCTGC------------TCACTCACTC---------------------------------------------------------------------------------------------------------GC--TTGCCGTTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTTCACGATTGTTTGTCTTTCCACACAGAACAG----------ATTC--GAA---------------------T-CTGGTT-GTCGGT-------------------------------GTA-------CATCAACGTTTTASizeHit CountTotal NormTotal
No Reads
droRho1
CAGTAAA---ACGTTCTTCCCACAACACTTGGC---------TGCCCATTTAGAA--------TATTTATAAACCCAGCGACTAATTGAGTGAGAGGGAG-----AGT----GA----------------GAGA--------GCGG----TCA-G-------------------TT----------------GTTCACTCACTCGGCTAC------------TCACTCACTC---------------------------------------------------------------------------------------------------------GC--TTGCCGTTTATTTGCCGCTTCCTCAAATTATTTAAGCGCATTTGACGATTGTTTGTCTTTCCACACAGAACAA----------AATC--GAA---------------------T-CTGGTT-GCCGGT-------------------------------GTA-------CATCCACGTTTAASizeHit CountTotal NormTotal
No Reads
droFic1
CAGTAGA---GCGTTCTTCCCACAACACTTGGCCGTCCATC-CGTCCATTTGGAA--------TATTTATAAACCCAGCGAATAATTGAGTGAGAGGGATA-GGGAGT----GT--AAGAGCAAGAGCGAGAGA--------GCGG----TCA-G-------------------CT----------------ATTCACTCACTCATTTAG------------CCACTCATTC---------------------------------------------------------------------------------------------------------GC--TTGCCGTTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTTCACGATTGTTTGTCTTTCCACACAGAACAG----------AATC--GAA---------------------T-CTGCCT-GCCGGT-------------------------------GAA-------CATCAACGTTTT-SizeHit CountTotal NormTotal
No Reads
droKik1
CAGCAAA---GGGTTCTTCCCACAG--------------------CTATTTAGAA--------TATTTTTAAACCCAGCGACTAATTGAGAGAGC--GAG-----AGT----GT----------------CAC--TCATT--GAGGCCCCTCA-G-------------------------------------------TCACTCATTTAC------------TCACTCACTCCCTCTCTTTTCCCCCAGTCGCACCCTCTCTTTCTCTGCTATAGCACTCTCTCTTTCTGAT------------------TCC-ATAGCCGGGTCTC----------GT--TCGCCGCTTATTTACCGCTTCCTCAAATCATTTAAGCGCATTTGACGATTGTTTGCCTTTCCACACAGAACAG----------AATCTCGAA---------------------T-CTAGTTAGCCG-----------------------------------A-------CATTTACACTAA-SizeHit CountTotal NormTotal
No Reads
droAna3
T---CCA---GTGTGCCTCCCACTGCACTCGGCTGG----C-TGTCCATTTAAAA--------TATTTATAAACACAGCGACTAATTGAATGAGCGGGTG-----AGT----GA----------------GAGT--------GTCG----GCA-G-------------------TTGCTCGTTGTACTCACAA-----GTACTCACTTTC------------ACACTCATTGGA----------------------------------------------AG------CGGT------------------TCC--CAGCTCGGTTTCGTTTGCGGCCGCCGTTGCCGTTTATTTGCCGCTTCCTCAAATCATTTAAGCGCATTTGACTATTGTTTGTCTTTCAACACAGAACAG----------ACCC--GAATC----------------CATT-CTAGTTGGCCGGC-------------------------------GTAAA-TA--A---AATAACTC-SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AATC----------------CATT-CTAGTTGGCCGGC-------------------------------.......................2115.005500000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GAATC----------------CATT-CTAGTTGGCCGG.......................................................2114.004400000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTCAACACAGAACAG----------ACCC--GA...........................................................................................2114.004300010
.................................................................................................................A----------------GAGT--------GTCG----GCA-G-------------------TTGCTCGT.....................................................................................................................................................................................................................................................................................................................................................2112.002200000
......................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACAG----------ACCC--GAATC----------------CATT-...................................................................2112.002020000
..............................................................................................................................................................................................................................................................................................................................................................................................................TTTCAACACAGAACAG----------ACCC--G............................................................................................2111.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAACAG----------ACCC--GAATC----------------CAT.....................................................................2111.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TC----------------CATT-CTAGTTGGCCGGC-------------------------------GT.....................2111.001000010
......................................................................................................................................................................................................................................TGGA----------------------------------------------AG------CGGT------------------TCC--CAGCTCGG........................................................................................................................................................................................................2111.001100000
.................................................................................................................................................................................................................................................................................................................................................................TGCCGCTTCCTCAAATCATTTG....................................................................................................................................................2211.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATT-CTAGTTGGCCGGC-------------------------------GTAA...................2111.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................CAACACAGAACAG----------ACCC--GA...........................................................................................1911.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC----------------CATT-CTAGTTGGCCGGC-------------------------------.......................2011.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATT-CTAGTTGGCCGGC-------------------------------GT.....................1911.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................GCATTTGACTATTGTTTGTCTTTCAACA.....................................................................................................................2811.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................CACAGAACAG----------ACCC--GAATC----------------CATT-CTA................................................................2611.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................CTATTGTTTGTCTTTCAACACAGAA................................................................................................................2511.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................TTTGTCTTTCAACACAGAACA..............................................................................................................2111.001100000
....................................................................................................................................................................................................................................................................................................................................TTCGTTTGCGGCCGCCGTTGC..................................................................................................................................................................................2111.001100000
..........................................................................................................GT----GA----------------GAGT--------GTCG----GCA-G-------------------TTGC.........................................................................................................................................................................................................................................................................................................................................................2011.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTCTTTCAACACAGAAC...............................................................................................................2111.001100000
...........................................................................................................................................................................................................................................................................................................................CAGCTCGGTTTCGTTTGCGGC...........................................................................................................................................................................................2111.001000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT-CTAGTTGGCCGGC-------------------------------GTA....................1911.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-CTAGTTGGCCGGC-------------------------------GTAAA-TA--.............2111.001100000
........................................................................................................................................................................................................ACTCACTTTC------------ACACTCATTGGA----------------------------------------------AG------CGGT------------------C....................................................................................................................................................................................................................2911.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................GCATTTGACTATTGTTTGT..............................................................................................................................1911.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................TCAACACAGAACAG----------ACCC--GA...........................................................................................2011.001100000
......................................................................AAACACAGCGACTAATTGAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................CACAGAACAG----------ACCC--GAATC----------------........................................................................1911.001100000
....................................................................................................................................................................................................................................ATTGGA----------------------------------------------AG------CGGT------------------TCC--CAGCTCG.........................................................................................................................................................................................................2211.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................TGTCTTTCAACACAGAACAG----------A..................................................................................................2111.001100000
................................................................................................................................................................................................................................ACTCATTGGA----------------------------------------------AG------CGGT------------------TCC--C...............................................................................................................................................................................................................2011.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................CTTTCAACACAGAACAG----------ACCC--.............................................................................................2111.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGAACAG----------ACCC--GAATC----------------........................................................................2011.001100000
droBip1
GAGTG----------CCTACCACTGCACTCGGC---------TGTCCATTTAAAA--------TATTAATAAACACAGCGACTAATTGAATGAGCGGGTG-----AGT----GA----------------GAGT--------GTCG----CCAAG-------------------TTGCTCGTTGTACTCGCAA-----GTACTCACTTTC------------ACACTCATTGGC----------------------------------------------AG------CGGT------------------TCC--CAGCTCGGTTTCGTGTG----CTG--CCGCCGTTTATTTGCCGTTTCCTCAAATCATTTAAGCGCATTTGACTATTGTTTGTCTTTCAACACAGAACAGAACAGAACAGAACA--GA-----------CCAGAATCCCAT-CTAGTTGGCCGGC-------------------------------GCAGA-----TAAAAACGC----SizeHit CountTotal NormTotal
No Reads
dp5
------------------------------------------------------------------------------------AT----TGAGAGGGAG-----AGT----GT----------------GAGAGCAAGCGAGCGG----TCA-GCGTCAACGTCAGCGTCAGGCT----------------AGCCACTCACTCAATCGCTCTCCCTCACGCCCTCTCATT-----------------------------------------------------------------------------------------CGGTTTC----------GT--TTGCCGTTTATTTGCCGTTTCCTCAAATCATTTAAGCGCATTTGAGAATTGTTTGCCTTTCCATACAGAACCG----------AAACCGAAC--CGAACAGAACAGAG--CCGC-CTAGTTAACCGGCGAAACGCAGAAAATATACAACAGACA---TC--G--GAA--CA-----------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGTTAACCGGCGAAACGC...............................................2014.0040400000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--CGAACAGAACAGAG--CC......................................................................1923.0060600000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGTTAACCGGCGAAACGCA..............................................2112.0020200000000
...................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGAACCG----------AAACCGAAC--C.......................................................................................2112.0020200000000
................................................................................................................................................................................................................................................................................................................................................................................................................TCCATACAGAACCG----------AAACCGAAC--........................................................................................2311.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGAG--CCGC-CTAGTTAAC..........................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGAACCG----------AAACCGAAC--CGAACAGAA...............................................................................2511.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGAACAGAG--CCGC-CTAGTTAACCGGC......................................................2911.0010001000000
................................................................................................................GT----------------GAGAGCAAGCGAGCGG----TC...................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTAACCGGCGAAACGC...............................................1911.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAACAGAG--CCGC-CTAGTTAACCGG.......................................................2711.0010000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCGAAC--CGAACAGAACAGAG--C.......................................................................2411.0010000000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACCGGCGAAACGCAGAAAA.........................................2211.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGAG--CCGC-CTAGTTAACCGGC......................................................2411.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTAACCGGCGAAACGCAG.............................................2111.0010100000000
................................................................................................................................................................................................................................TCTCATT-----------------------------------------------------------------------------------------CGGTTTC----------GT--TTGCC.................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................CCTTTCCATACAGAACCG----------AAACCGAA...........................................................................................2611.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CCATACAGAACCG----------AAACCGAA...........................................................................................2111.0010000001000
................................................................................................................................................................................................................................................................................................................................................................................................GAGAATTGTTTGCCTTTCC........................................................................................................................1911.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAACCG----------AAACCGAAC--CGAA....................................................................................2211.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................CCTTTCCATACAGAACCG----------AAACCGAAC--CG......................................................................................2911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TACAGAACCG----------AAACCGAAC--C.......................................................................................2011.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GAACCG----------AAACCGAAC--CGAACA..................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................ATTTGAGAATTGTTTGCCT............................................................................................................................1911.0010000010000
.............................................................................................................................................................................................................................................................................................................................................................................................TTTGAGAATTGTTTGCCTTTCC........................................................................................................................2211.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAAC--CGAACAGAACAGAG--CCGC-C..................................................................2511.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................TTTGCCTTTCCATACAGAACC..............................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGAACCG----------AAACCGAAC--CGAA....................................................................................2011.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--CGAACAGAACAGAG--CCGC-...................................................................2111.0010000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................TTTCCATACAGAACCG----------AAACCG.............................................................................................2211.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCATACAGAACCG----------AAACCGAAC--CG......................................................................................2811.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAC--CGAACAGAACAGAG--CCG.....................................................................2211.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TGCCTTTCCATACAGAACCG----------A..................................................................................................2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--CGAACAGAACAGAG--CCGA-...................................................................2130.6720200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AACCG----------AAACCGAAC--CGAACA..................................................................................2030.3310100000000
.................................................................................................................................................G----TCA-GCGTCAACGTCAGCGT.................................................................................................................................................................................................................................................................................................................................................................2040.2510000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGAAC--CGAACAGAACAGA...........................................................................21100.2020200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGAAC--CGAACAGAACAG............................................................................20110.0910100000000
droPer2
------------------------------------------------------------------------------------AT----TGAGAGGGAG-----AGT----GT----------------GAGAGCAAGCGAGCGG----TCA-GCGTCAACGTCAGCGTCAGGCT----------------AGCCACTCACTCAATCGCTCTCCCTCACGCCCTCTCATT-----------------------------------------------------------------------------------------CGGTTTC----------GT--TTGCCGTTTATTTGCCGTTTCCTCAAATCATTTAAGCGCATTTGAGAATTGTTTGCCTTTCCATACAGAACCG----------AAACCGAAC--CGAACAGAACAGAG--CCGA-CTAGTTAACCGGCGAAACGCAGAAAATATACAACAGACA---TC--G--GAA--CA-----------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................TTTCCATACAGAACCG----------AA.................................................................................................1811.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTAACCGGCGAAACGC...............................................1811.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AC--CGAACAGAACAGAG--CC......................................................................1821.002200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGAACAGAG--CCGA-CT.................................................................1811.001000010
......................................................................................................................................................TCA-GCGTCAACGTCAGCGTCAG..............................................................................................................................................................................................................................................................................................................................................................2211.001010000
.................................................................................................................................................G----TCA-GCGTCAACGTCAGC...................................................................................................................................................................................................................................................................................................................................................................1840.502101000
........................................................................................................................................................................................................................................................................................................................................................................................................................GAACCG----------AAACCGAAC--CGAAC...................................................................................2040.251010000
droWil2
TATTATATATAAATTGTTCCCACAGCATTTAAA---------TG-AAATGTA-TT--------TATTTTTAA-CGC-TCGACTAATTGAGTGACGAAAAGGGG--GGCAGATGGCAAAGAGCTA------CAGT----------------TGA-G---------------------------------------TGAATGAGTGATT----------------C-TTCTCTCCCTCTCTTTTTGTCT-TTCTCTTTCTCTCTGTCTCTGTTAG-TCACTCAATTTAGGTGAGAGACTCAATGTTGTCCCCTCCAACAAGTAGGTTTCA---------GT--TTG--CTTTATTTGCCGTTTCCTCAAATCATTTAAGCACATTTCACAATTGTTTGTCTTTCCCGACAGAACGC----------AAAATAAAA--TTTACAAAAA--------------AAA-AAAAAA-------------------------CCTA--AAC-C-TACTAAAGACTGTTTG-SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
............................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCCCGACAGAACGC----------...................................................................................................1812.00220000
....................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTTGTCTTTCCCGACA...................................................................................................................2012.00200002
........................................................................................................................GCTA------CAGT----------------TGA-G---------------------------------------TGAATGAGT................................................................................................................................................................................................................................................................................................................................2111.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................TTTCCCGACAGAACGC----------AAAATAAAA--........................................................................................2511.00110000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-------------------------CCTA--AAC-C-TACTAAAGACTGTTT..2611.00110000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAACGC----------AAAATAAAA--T.......................................................................................1911.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------CCTA--AAC-C-TACTAAAGACTGT....2211.00100001
.................................................................................................................................................................................................................................................................................................................................................................................................................CCCGACAGAACGC----------AAAATAA............................................................................................2011.00110000
.........................................................................................................................................................................................................................................................................TCTGTTAG-TCACTCAATTTAGGTGAGA......................................................................................................................................................................................................................................2711.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTCTTTCCCGACAG..................................................................................................................1811.00110000
droMoj3
C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTATTTGCCGTTTCCTCGACGCATTTCAGCGCATTTGACTATTGTTTGTCTTACGAAACAG---------------AACC--AAA---------------------T-CCGGCA-ACCGGT-------------------------G-----CCA----------GAACAATTC-SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTCTTACGAAACAG---------------AACC--A............................................................................................2311.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................AAACAG---------------AACC--AAA---------------------T-CCGGCA-A...........................................................2111.001000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................C--AAA---------------------T-CCGGCA-ACCGGT-------------------------G-----CC.....................2011.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AG---------------AACC--AAA---------------------T-CCGGCA-ACCGGT-------------------------G-----CCA----------G.........2711.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................CTTACGAAACAG---------------AACC--AAA---------------------T-CCGGCA-............................................................2611.001100000
droGri2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTATTTGTTCTTTCCTCAACACATTTCAGCGCATTTGACTATTGTTTGTCATACGAAACAGAACAG----------AATC--GGAATTGA----------------AATCGAAA-ACCGGT-------------------------GTTG--CCA-------CAACAA-------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACAG----------AATC--GGAATTGA----------------AATCGAA..............................................................2312.00202
.................................................................................................................................................................................................................................................................................................................................................................................................................CGAAACAGAACAG----------AATC--GGAATTGA----------------.....................................................................2511.00110
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAAA-ACCGGT-------------------------GTTG--CC.....................1911.00110
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAACAG----------AATC--GGAATTGA----------------AATC.................................................................2511.00110
............................................................................................................................................................................................................................................................................................................................................................................................................TCATACGAAACAGAACAG----------AATC--G............................................................................................2311.00110
...........................................................................................................................................................................................................................................................................................................................................................................................................GTCATACGAAACAGAACAG----------A..................................................................................................2011.00110
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACAG----------AATC--GGAATTGA----------------AATCGAAA-............................................................2411.00110
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAA-ACCGGT-------------------------GTTG--CCA-------C............1811.00110
..........................................................................................................................................................................................................................................................................................................................................................................................................TGTCATACGAAACAGAACAG----------AATC--GG...........................................................................................2611.00110
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAAA-ACCGGT-------------------------GTTG--CCA-------CA...........2211.00110
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAACAG----------AATC--GGAATTGA----------------.....................................................................2111.00101
..............................................................................................................................................................................................................................................................................................................................................................................................................ATACGAAACAGAACAG----------AATC--GGAATTG......................................................................................2711.00101
.............................................................................................................................................................................................................................................................................................................................................................................................TTTGACTATTGTTTGTCATACG........................................................................................................................2211.00110
........................................................................................................................................................................................................................................................................................................................................................................................................................GAACAG----------AATC--GGAATTGA----------------AATCG................................................................2311.00101
....................................................................................................................................................................................................................................................................................................................................................................................................................AACAGAACAG----------AATC--GGAATTGA----------------AATC.................................................................2611.00101
.............................................................................................................................................................................................................................................................................................................................................................................................................................G----------AATC--GGAATTGA----------------AATCG................................................................1821.00220

Generated: 06/28/2015 at 04:19 PM